View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4740-Insertion-7 (Length: 593)
Name: NF4740-Insertion-7
Description: NF4740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4740-Insertion-7 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 553; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 553; E-Value: 0
Query Start/End: Original strand, 8 - 593
Target Start/End: Original strand, 33675217 - 33675802
Alignment:
| Q |
8 |
gtttatcttgcactgttgctgcagagcctgtttggtttaggtcttagatgtgttctgaatattcaaaaccgcattggaggaaaaattaatagcttgaatt |
107 |
Q |
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| T |
33675217 |
gtttatcttgcactgttgctgcagagcctgtttggtttaggtcttagatgtgttctggatattcaaaaccgcattggaggaaaaattaatagcttgaatt |
33675316 |
T |
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| Q |
108 |
tttacattaacagtctttgggttatatgcctcatggaaaataattgtccaagaatatccaaagttcttttgcttttctaagaccagtcaattcttacata |
207 |
Q |
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| T |
33675317 |
tttacattaacagtctttgggttatatgcctcatggaaaataattgtccaagaatatccaaagttcttttgcttttctaagaccagtcaattcttacata |
33675416 |
T |
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| Q |
208 |
cataataaatttgattctattcatttatcttgtaacatgaataaaaggaattagtcctttgatctttctgggctgnnnnnnngttgttgcaacttgcaaa |
307 |
Q |
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| T |
33675417 |
cataataaatttgattctattcatttatcttgtaacatgaataaaaggaattagtcctttgatctttctgggctgtttttttgttgttgcaacttgcaaa |
33675516 |
T |
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| Q |
308 |
gcttgccgttgtatataattccttacgcattctttgggttgagttgggctatttttcttcttgattaatcactttggaaatcaaaagctccctctgaagt |
407 |
Q |
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| T |
33675517 |
gcttgccgttgtatataattccttacgcattctttgggttgagttgggctatttttcttcttgattaatcactttggaaatcaaaagctccctctgaagt |
33675616 |
T |
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| Q |
408 |
caactcttttatttgatctgtggtacttaataaaattaatagtataataataatattgtaggttcgtaggatgcataaggcttgttccactgatatatgt |
507 |
Q |
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| T |
33675617 |
caactcttttatttgatctgtggtacttaataaaattaatagtataataataatattgtaggttcgtaggatgcataaggcttgttccactgatatatgt |
33675716 |
T |
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| Q |
508 |
gtaatgtgtcaagtttggtggttgctcagaaccagtgtcacctcctattcatacattctgctgctgtttctttatggaattttgag |
593 |
Q |
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| T |
33675717 |
ctaatgtgtcaagtgtggtggttgctcagaaccagtgtcacctcctattcatacattctgctgctgtttctttatggaattttgag |
33675802 |
T |
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