View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4740_high_5 (Length: 249)
Name: NF4740_high_5
Description: NF4740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4740_high_5 |
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Alignment Details
Target: chr3 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 26654707 - 26654917
Alignment:
| Q |
11 |
atgaaagtgcttgatgtggtggcttaagtcctaacatcatgacagtgacgcgcttttcatattctccataaatggtgatgaactcttagttgtagtaatn |
110 |
Q |
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| T |
26654707 |
atgaaagtgcttgatgtggtggcttaagtcctaacatcatgacagtgacgcgcttttcatattctccataaatggtgatgaactcttagttgtagtaata |
26654806 |
T |
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| Q |
111 |
nnnnnngcctttgattgaaaattcaatttcaatattgatcgattagaaagagcatttacattcattctttaatttattttttaataacaaaactatatag |
210 |
Q |
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| T |
26654807 |
aaaaaagcctttgattgaaaattcaatttcaatatttatcgattagaaagagcatttacattcattctttaatttattttttaataacaaaactatatag |
26654906 |
T |
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| Q |
211 |
caattgaataa |
221 |
Q |
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| T |
26654907 |
caattgaataa |
26654917 |
T |
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