View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4741_high_16 (Length: 281)
Name: NF4741_high_16
Description: NF4741
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4741_high_16 |
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Alignment Details
Target: chr1 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 11 - 266
Target Start/End: Complemental strand, 10546701 - 10546445
Alignment:
| Q |
11 |
catcatcaacaatcaaactcacgcctattattttacctcagtcgaatggacaaagcccattcttacttggtattcagtatgctcaatttgcacaattcaa |
110 |
Q |
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| T |
10546701 |
catcatcaacaatcaaactcacgcctattattttacctcagttgaatggacaaagcccattcttacttggtattcagtatgctcaatttgcacaattcaa |
10546602 |
T |
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| Q |
111 |
agttaggacacagtttattaaacagcaaggtaattaaaaatcttatatattcaattaaattaataatcagttgctctttattgaa-aaaactcacaaata |
209 |
Q |
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| T |
10546601 |
agttaggacacaatttattaaacagcaaggtaattaaaaatcttatatattcaattaaattaataatcagtcgctctttattgaaaaaaactcacaaata |
10546502 |
T |
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| Q |
210 |
ttttagttaattaagattaagattgaccatcgtgtatcaataattgaaaatcgtttg |
266 |
Q |
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| T |
10546501 |
ttttagttaattaagattaaaattgactatcgtgtatcaataattgaaaatcgtttg |
10546445 |
T |
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