View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4743_low_7 (Length: 359)
Name: NF4743_low_7
Description: NF4743
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4743_low_7 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 16 - 359
Target Start/End: Complemental strand, 33598928 - 33598578
Alignment:
| Q |
16 |
gaaattatattatatttaaattgttggaaattgaaacttcgatttttt-cttgaatactttcagctggtgaaaaagcttaaacgatatctaaggttcgat |
114 |
Q |
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| T |
33598928 |
gaaattatattatatttaaatttttggaaattgaaactttgatttttttcttgaatactttcagctggtgaaaaagcttaaacgatgcctaaggttcgat |
33598829 |
T |
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| Q |
115 |
gaccaattccattttggttttgttgctaattctaatgttgcaaatgttgtccgtgtttccgaccgtgcgatt----------ttacacggattttaattg |
204 |
Q |
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| T |
33598828 |
gaccaattccaatttggtttcgttgctaattctaatgttgcaaatgctgtccgtgtttccgaccgtgcgattatacagtggtttacacggattttaattg |
33598729 |
T |
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| Q |
205 |
agctgttggatggattaagtcacagaattatatttgactgttcgtgtacatattgatttgatgtataattttttagtgggagaattatatcagatttaag |
304 |
Q |
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||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
33598728 |
agctgttggattga----gtcacagaattatatttgactgtttgtgtacatattgatttgatgtataatttttgagtgggagaattatatcagatttaag |
33598633 |
T |
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| Q |
305 |
ccaatattctaacttttcaggaaaagtctgttattacaattagagacagccaacc |
359 |
Q |
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| T |
33598632 |
ccaatattctaacttttcaggaaaagtctgttattacaattagagacagccaacc |
33598578 |
T |
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