View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4744-Insertion-11 (Length: 204)
Name: NF4744-Insertion-11
Description: NF4744
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4744-Insertion-11 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 7 - 204
Target Start/End: Original strand, 9277090 - 9277287
Alignment:
| Q |
7 |
agatagatcggtggatgaatgatatatcagcccataagttggatagtagaccagaacagtgaacgctaagaaagtgactgcaactttaactttccatgtt |
106 |
Q |
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| T |
9277090 |
agatagatcggtggatgaatgatatatcagcccataagttggatagtagaccagaacagtgaacgctaagaaagtgactgcaactttaactttccatgtt |
9277189 |
T |
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| Q |
107 |
ttgtggagaaaaataagaacatgatggaaggagatttggcaccgtaactgtgtcacgtagtttctattgaaaattgtttttcgtctgtttgatctaat |
204 |
Q |
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| T |
9277190 |
ttgtggagaaaaataagaacattatggaaggagatttggcaccgtaactgtgtcacgtagtttctattgaaaattgtttttcgtctgtctgatctaat |
9277287 |
T |
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