View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4744-Insertion-6 (Length: 547)

Name: NF4744-Insertion-6
Description: NF4744
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4744-Insertion-6
NF4744-Insertion-6
[»] scaffold0066 (3 HSPs)
scaffold0066 (98-547)||(33375-33814)
scaffold0066 (293-547)||(31218-31486)
scaffold0066 (185-281)||(31061-31157)
[»] chr6 (84 HSPs)
chr6 (22-159)||(16766683-16766825)
chr6 (69-172)||(5970091-5970194)
chr6 (22-159)||(10770609-10770747)
chr6 (70-172)||(9107354-9107462)
chr6 (22-159)||(12696310-12696446)
chr6 (69-159)||(8365502-8365592)
chr6 (69-158)||(26562676-26562765)
chr6 (86-172)||(34595101-34595193)
chr6 (69-172)||(8713952-8714056)
chr6 (86-153)||(7977830-7977897)
chr6 (75-138)||(9522898-9522961)
chr6 (92-159)||(16833294-16833361)
chr6 (86-172)||(28715270-28715354)
chr6 (83-142)||(31384923-31384982)
chr6 (86-177)||(853859-853956)
chr6 (86-144)||(7801156-7801214)
chr6 (91-144)||(1681759-1681812)
chr6 (94-159)||(8776981-8777046)
chr6 (76-144)||(8931592-8931660)
chr6 (23-156)||(32978842-32978970)
chr6 (82-146)||(9911524-9911589)
chr6 (22-159)||(10842518-10842650)
chr6 (87-144)||(15489733-15489790)
chr6 (86-159)||(17841589-17841662)
chr6 (70-159)||(21395292-21395380)
chr6 (88-144)||(1191702-1191758)
chr6 (80-164)||(2117057-2117140)
chr6 (69-137)||(6349720-6349788)
chr6 (86-164)||(3209362-3209441)
chr6 (86-137)||(6327518-6327569)
chr6 (69-172)||(16488573-16488676)
chr6 (82-144)||(17302557-17302620)
chr6 (92-143)||(31959161-31959212)
chr6 (82-144)||(7930306-7930368)
chr6 (86-159)||(426514-426587)
chr6 (103-172)||(19602198-19602267)
chr6 (86-159)||(28152085-28152157)
chr6 (71-119)||(785440-785488)
chr6 (86-153)||(4877934-4878002)
chr6 (86-138)||(6898281-6898333)
chr6 (87-159)||(7938102-7938174)
chr6 (82-138)||(9025490-9025546)
chr6 (94-138)||(17435206-17435250)
chr6 (86-137)||(403864-403915)
chr6 (66-137)||(9617442-9617513)
chr6 (87-138)||(13851743-13851794)
chr6 (101-144)||(34225824-34225867)
chr6 (80-138)||(2224233-2224291)
chr6 (76-138)||(9195744-9195806)
chr6 (22-144)||(17327592-17327713)
chr6 (76-138)||(34073337-34073399)
chr6 (86-159)||(7265593-7265666)
chr6 (86-171)||(7377953-7378038)
chr6 (83-159)||(3398605-3398680)
chr6 (86-138)||(12627577-12627629)
chr6 (93-137)||(17341671-17341715)
chr6 (77-137)||(18252742-18252802)
chr6 (96-144)||(25010212-25010260)
chr6 (94-137)||(4118341-4118384)
chr6 (101-171)||(7569183-7569251)
chr6 (121-172)||(12868710-12868761)
chr6 (75-166)||(16111746-16111837)
chr6 (101-136)||(16388248-16388283)
chr6 (92-159)||(30866150-30866217)
chr6 (84-138)||(7151419-7151473)
chr6 (76-138)||(20576623-20576685)
chr6 (87-144)||(24645481-24645539)
chr6 (101-138)||(1532247-1532284)
chr6 (86-135)||(1700362-1700411)
chr6 (82-159)||(9027164-9027241)
chr6 (76-177)||(17302315-17302416)
chr6 (101-138)||(19040359-19040396)
chr6 (82-159)||(19044450-19044527)
chr6 (86-159)||(23771565-23771637)
chr6 (92-137)||(25038077-25038122)
chr6 (86-127)||(26402680-26402721)
chr6 (101-138)||(33468397-33468434)
chr6 (76-144)||(34290069-34290135)
chr6 (82-138)||(7086802-7086858)
chr6 (22-73)||(9658945-9658997)
chr6 (69-113)||(22745989-22746033)
chr6 (101-137)||(31579240-31579276)
chr6 (94-138)||(32511674-32511718)
chr6 (86-138)||(33001289-33001341)
[»] chr5 (72 HSPs)
chr5 (80-172)||(31084296-31084388)
chr5 (22-144)||(21542031-21542158)
chr5 (69-159)||(21522736-21522826)
chr5 (69-159)||(21533302-21533392)
chr5 (76-159)||(21351895-21351978)
chr5 (69-144)||(39698542-39698617)
chr5 (28-159)||(17088270-17088402)
chr5 (87-159)||(42893346-42893418)
chr5 (86-144)||(21576745-21576803)
chr5 (86-158)||(6247609-6247681)
chr5 (76-144)||(7677706-7677774)
chr5 (86-171)||(21191056-21191147)
chr5 (69-159)||(37328827-37328917)
chr5 (24-153)||(41633727-41633856)
chr5 (86-138)||(8420034-8420086)
chr5 (82-172)||(13287395-13287491)
chr5 (92-159)||(14674255-14674322)
chr5 (69-144)||(19579702-19579777)
chr5 (86-153)||(33178017-33178084)
chr5 (92-158)||(24906307-24906373)
chr5 (21-138)||(43001807-43001923)
chr5 (80-144)||(10298570-10298634)
chr5 (76-159)||(19552535-19552616)
chr5 (82-177)||(2436890-2436985)
chr5 (93-144)||(15405062-15405113)
chr5 (69-172)||(21814234-21814337)
chr5 (69-159)||(41995457-41995545)
chr5 (69-131)||(21319928-21319990)
chr5 (83-144)||(30183550-30183611)
chr5 (70-138)||(3966510-3966578)
chr5 (80-144)||(5894827-5894891)
chr5 (82-153)||(30135305-30135377)
chr5 (82-138)||(41091253-41091309)
chr5 (82-137)||(16374338-16374393)
chr5 (94-153)||(4105249-4105310)
chr5 (92-138)||(7218273-7218319)
chr5 (86-159)||(14422890-14422961)
chr5 (76-142)||(40131624-40131690)
chr5 (93-134)||(6326304-6326345)
chr5 (86-127)||(15884006-15884047)
chr5 (22-71)||(23290000-23290049)
chr5 (86-172)||(15382444-15382538)
chr5 (92-144)||(17177029-17177081)
chr5 (76-144)||(22423802-22423870)
chr5 (98-138)||(27932242-27932282)
chr5 (92-144)||(31264439-31264491)
chr5 (83-138)||(6471886-6471941)
chr5 (113-164)||(18316952-18317003)
chr5 (101-177)||(22013376-22013458)
chr5 (86-137)||(28588674-28588725)
chr5 (73-171)||(32766930-32767026)
chr5 (83-138)||(36838550-36838605)
chr5 (103-137)||(4344750-4344784)
chr5 (105-159)||(6770529-6770583)
chr5 (69-159)||(36642745-36642835)
chr5 (92-137)||(5467984-5468029)
chr5 (78-159)||(6035469-6035549)
chr5 (69-166)||(11685918-11686014)
chr5 (78-127)||(12199948-12199997)
chr5 (22-135)||(14873527-14873639)
chr5 (88-137)||(23015991-23016040)
chr5 (92-137)||(25863212-25863257)
chr5 (79-153)||(25888286-25888362)
chr5 (101-134)||(35904656-35904689)
chr5 (80-137)||(38749557-38749614)
chr5 (92-144)||(12159953-12160005)
chr5 (76-172)||(12264819-12264915)
chr5 (22-54)||(16304368-16304400)
chr5 (23-138)||(18592080-18592200)
chr5 (103-159)||(19168838-19168894)
chr5 (86-138)||(30502388-30502440)
chr5 (86-138)||(30542731-30542783)
[»] chr7 (68 HSPs)
chr7 (22-172)||(9778475-9778622)
chr7 (22-144)||(11665371-11665498)
chr7 (69-153)||(24339634-24339718)
chr7 (21-138)||(26033391-26033513)
chr7 (22-138)||(5409773-5409888)
chr7 (86-166)||(8234125-8234205)
chr7 (76-159)||(9408324-9408407)
chr7 (25-144)||(13770692-13770810)
chr7 (69-172)||(25822628-25822731)
chr7 (85-151)||(3991318-3991384)
chr7 (69-144)||(11272569-11272646)
chr7 (82-177)||(27945003-27945104)
chr7 (77-172)||(18038968-18039067)
chr7 (69-137)||(7438714-7438782)
chr7 (69-172)||(13300385-13300486)
chr7 (80-144)||(32094014-32094079)
chr7 (69-137)||(6028633-6028701)
chr7 (87-159)||(11061077-11061149)
chr7 (22-138)||(43027406-43027521)
chr7 (94-153)||(25481894-25481953)
chr7 (69-127)||(21560521-21560579)
chr7 (70-159)||(6630896-6630985)
chr7 (81-142)||(7058429-7058490)
chr7 (69-153)||(11831424-11831508)
chr7 (82-138)||(18215182-18215238)
chr7 (86-138)||(21880159-21880211)
chr7 (22-137)||(2334256-2334377)
chr7 (92-159)||(24105664-24105731)
chr7 (92-158)||(40287363-40287428)
chr7 (70-124)||(43243098-43243152)
chr7 (70-131)||(1885587-1885648)
chr7 (81-138)||(7328686-7328743)
chr7 (86-159)||(21864792-21864867)
chr7 (86-138)||(28155577-28155629)
chr7 (99-159)||(29763187-29763247)
chr7 (85-144)||(19992002-19992061)
chr7 (93-144)||(35861965-35862016)
chr7 (68-138)||(8160423-8160493)
chr7 (80-134)||(17307904-17307958)
chr7 (82-144)||(18013070-18013132)
chr7 (77-159)||(21930615-21930696)
chr7 (77-159)||(32308106-32308188)
chr7 (87-144)||(5835248-5835305)
chr7 (80-137)||(11890913-11890970)
chr7 (69-137)||(15902830-15902898)
chr7 (86-138)||(19213810-19213862)
chr7 (86-158)||(20549778-20549850)
chr7 (94-138)||(30813819-30813863)
chr7 (86-153)||(7197297-7197364)
chr7 (70-137)||(8056929-8056995)
chr7 (81-132)||(22602705-22602756)
chr7 (101-160)||(22868027-22868086)
chr7 (87-158)||(33994199-33994270)
chr7 (110-165)||(45056925-45056980)
chr7 (101-166)||(1656657-1656720)
chr7 (110-172)||(3801229-3801291)
chr7 (101-138)||(2424621-2424658)
chr7 (98-139)||(5954253-5954294)
chr7 (95-159)||(13557750-13557817)
chr7 (80-137)||(16341504-16341561)
chr7 (76-137)||(26329372-26329433)
chr7 (101-138)||(29787384-29787421)
chr7 (92-137)||(43250001-43250046)
chr7 (101-137)||(5938480-5938516)
chr7 (86-138)||(26733311-26733363)
chr7 (22-54)||(28155639-28155671)
chr7 (22-86)||(29998974-29999038)
chr7 (87-131)||(48438560-48438604)
[»] chr1 (98 HSPs)
chr1 (82-177)||(24577182-24577277)
chr1 (86-172)||(22881616-22881702)
chr1 (22-159)||(47989484-47989625)
chr1 (22-144)||(1486646-1486767)
chr1 (87-172)||(18190109-18190192)
chr1 (82-159)||(1704988-1705065)
chr1 (69-137)||(6612154-6612222)
chr1 (81-153)||(113291-113363)
chr1 (22-166)||(17778530-17778670)
chr1 (73-144)||(6332672-6332742)
chr1 (22-153)||(9828036-9828172)
chr1 (92-159)||(21378564-21378631)
chr1 (86-172)||(38078661-38078748)
chr1 (87-150)||(40258934-40258997)
chr1 (92-159)||(48450593-48450660)
chr1 (22-143)||(32461395-32461520)
chr1 (69-138)||(5376483-5376552)
chr1 (86-159)||(22515887-22515960)
chr1 (86-159)||(31672895-31672968)
chr1 (92-171)||(3490396-3490475)
chr1 (86-153)||(19058856-19058923)
chr1 (22-166)||(25361867-25362010)
chr1 (69-144)||(28273071-28273146)
chr1 (92-147)||(31015041-31015096)
chr1 (70-138)||(31694694-31694764)
chr1 (22-172)||(40917718-40917877)
chr1 (86-136)||(18337338-18337388)
chr1 (86-159)||(24334705-24334779)
chr1 (86-144)||(42359449-42359507)
chr1 (69-135)||(44482240-44482306)
chr1 (77-138)||(8010278-8010339)
chr1 (86-159)||(37598818-37598890)
chr1 (86-159)||(46348383-46348456)
chr1 (86-166)||(51410003-51410084)
chr1 (87-159)||(1815243-1815315)
chr1 (93-149)||(32434723-32434779)
chr1 (93-177)||(35702595-35702679)
chr1 (101-168)||(10233230-10233297)
chr1 (69-166)||(6427440-6427540)
chr1 (69-159)||(9629883-9629973)
chr1 (93-159)||(14359529-14359594)
chr1 (91-177)||(30359357-30359442)
chr1 (81-143)||(5944283-5944347)
chr1 (22-138)||(34712325-34712435)
chr1 (78-159)||(40285646-40285727)
chr1 (77-153)||(17754303-17754379)
chr1 (101-153)||(34298428-34298480)
chr1 (86-138)||(41877470-41877522)
chr1 (67-126)||(15449213-15449272)
chr1 (76-159)||(18556446-18556529)
chr1 (70-137)||(24176351-24176418)
chr1 (101-159)||(398780-398838)
chr1 (76-158)||(10572579-10572661)
chr1 (102-156)||(12443476-12443530)
chr1 (69-127)||(30173745-30173803)
chr1 (82-139)||(7918207-7918264)
chr1 (102-158)||(9449024-9449080)
chr1 (103-171)||(17831548-17831616)
chr1 (87-159)||(36878447-36878519)
chr1 (94-144)||(13011223-13011274)
chr1 (92-144)||(18471299-18471353)
chr1 (101-144)||(23738679-23738722)
chr1 (103-138)||(26238129-26238164)
chr1 (93-144)||(29144365-29144416)
chr1 (75-130)||(34371728-34371783)
chr1 (80-127)||(35919270-35919317)
chr1 (96-142)||(46940803-46940850)
chr1 (92-150)||(1864886-1864944)
chr1 (96-151)||(8117024-8117083)
chr1 (106-172)||(10474997-10475063)
chr1 (105-143)||(21366039-21366077)
chr1 (86-163)||(21620932-21621014)
chr1 (96-138)||(37055866-37055908)
chr1 (92-150)||(39101188-39101246)
chr1 (101-158)||(1262871-1262928)
chr1 (82-119)||(2218265-2218302)
chr1 (85-142)||(2283669-2283726)
chr1 (101-138)||(5898281-5898318)
chr1 (93-138)||(5927347-5927392)
chr1 (82-159)||(6427336-6427413)
chr1 (86-159)||(9103626-9103698)
chr1 (101-138)||(16927200-16927237)
chr1 (69-138)||(21038090-21038159)
chr1 (92-137)||(22794084-22794129)
chr1 (77-138)||(27471557-27471618)
chr1 (79-152)||(38503313-38503386)
chr1 (101-138)||(40181878-40181915)
chr1 (101-144)||(9033022-9033066)
chr1 (94-138)||(11605943-11605987)
chr1 (93-137)||(15323171-15323215)
chr1 (77-137)||(16164306-16164366)
chr1 (107-159)||(16812529-16812581)
chr1 (82-138)||(20157346-20157402)
chr1 (104-152)||(23621964-23622012)
chr1 (104-152)||(23652992-23653040)
chr1 (71-131)||(24462255-24462315)
chr1 (101-137)||(26837757-26837793)
chr1 (75-119)||(48547974-48548018)
[»] chr8 (58 HSPs)
chr8 (22-159)||(22651962-22652104)
chr8 (94-177)||(22595962-22596045)
chr8 (69-159)||(15816112-15816202)
chr8 (76-144)||(25566842-25566910)
chr8 (69-144)||(2572039-2572114)
chr8 (22-144)||(29447041-29447168)
chr8 (69-159)||(29510287-29510377)
chr8 (74-159)||(13436952-13437037)
chr8 (86-140)||(4948657-4948711)
chr8 (69-138)||(28745505-28745574)
chr8 (94-159)||(36450762-36450827)
chr8 (85-172)||(8342947-8343032)
chr8 (93-159)||(8343302-8343368)
chr8 (93-159)||(30077394-30077460)
chr8 (92-164)||(18407700-18407772)
chr8 (69-178)||(21465387-21465488)
chr8 (86-137)||(20873077-20873128)
chr8 (76-159)||(24362192-24362275)
chr8 (86-153)||(24613513-24613579)
chr8 (86-164)||(13844596-13844674)
chr8 (86-171)||(4786338-4786423)
chr8 (86-159)||(5813578-5813651)
chr8 (76-137)||(11927076-11927137)
chr8 (86-159)||(18170482-18170555)
chr8 (86-159)||(18634050-18634123)
chr8 (82-159)||(30271287-30271364)
chr8 (92-137)||(41831946-41831991)
chr8 (69-144)||(27067283-27067356)
chr8 (86-138)||(34897092-34897144)
chr8 (92-136)||(40332200-40332244)
chr8 (81-144)||(17468503-17468566)
chr8 (93-144)||(22197749-22197800)
chr8 (86-137)||(24669441-24669492)
chr8 (92-159)||(25192353-25192420)
chr8 (87-137)||(4298887-4298937)
chr8 (101-151)||(4611528-4611578)
chr8 (22-159)||(4673356-4673498)
chr8 (94-138)||(7442852-7442896)
chr8 (93-159)||(22204625-22204693)
chr8 (71-144)||(24727737-24727812)
chr8 (80-159)||(24857995-24858076)
chr8 (101-144)||(7658464-7658507)
chr8 (101-160)||(14134684-14134743)
chr8 (86-117)||(15023257-15023288)
chr8 (83-137)||(16867202-16867259)
chr8 (87-138)||(20679396-20679447)
chr8 (94-144)||(31514873-31514924)
chr8 (83-137)||(11944673-11944727)
chr8 (101-139)||(13203647-13203685)
chr8 (87-137)||(31557005-31557054)
chr8 (94-144)||(41838131-41838181)
chr8 (101-138)||(3025558-3025595)
chr8 (96-137)||(28642416-28642457)
chr8 (92-137)||(44067524-44067569)
chr8 (71-131)||(10497801-10497861)
chr8 (92-163)||(25886999-25887071)
chr8 (92-156)||(31236583-31236647)
chr8 (103-170)||(40063928-40063993)
[»] chr2 (65 HSPs)
chr2 (20-144)||(36756273-36756402)
chr2 (69-159)||(30717513-30717603)
chr2 (22-144)||(11223795-11223921)
chr2 (69-172)||(26769484-26769587)
chr2 (22-136)||(37419752-37419871)
chr2 (94-177)||(38117167-38117250)
chr2 (76-138)||(4882686-4882748)
chr2 (79-153)||(12668416-12668490)
chr2 (86-178)||(19536397-19536496)
chr2 (93-172)||(21374706-21374786)
chr2 (83-144)||(974748-974809)
chr2 (86-159)||(15972859-15972932)
chr2 (87-144)||(18841014-18841071)
chr2 (77-153)||(23058433-23058510)
chr2 (86-144)||(2438719-2438777)
chr2 (83-141)||(15657868-15657926)
chr2 (86-144)||(20473323-20473381)
chr2 (86-144)||(30335418-30335476)
chr2 (91-144)||(12940940-12940993)
chr2 (86-159)||(18421949-18422022)
chr2 (92-137)||(30404856-30404901)
chr2 (86-159)||(37558963-37559036)
chr2 (84-144)||(20539672-20539732)
chr2 (32-144)||(14996171-14996282)
chr2 (93-159)||(21091709-21091775)
chr2 (86-159)||(21624252-21624326)
chr2 (69-159)||(34784965-34785055)
chr2 (87-172)||(42832277-42832363)
chr2 (81-138)||(33153431-33153488)
chr2 (93-138)||(39323271-39323316)
chr2 (92-159)||(6940241-6940308)
chr2 (80-159)||(24894375-24894454)
chr2 (101-159)||(21616748-21616806)
chr2 (77-170)||(44860297-44860388)
chr2 (101-138)||(28677916-28677953)
chr2 (92-137)||(44605145-44605190)
chr2 (82-166)||(29970545-29970629)
chr2 (69-117)||(35056896-35056944)
chr2 (86-138)||(37411244-37411296)
chr2 (77-137)||(40681990-40682050)
chr2 (86-138)||(5040739-5040793)
chr2 (22-73)||(18054718-18054769)
chr2 (92-159)||(23718012-23718079)
chr2 (92-159)||(24105684-24105751)
chr2 (94-172)||(29176501-29176579)
chr2 (98-159)||(29367381-29367443)
chr2 (101-159)||(31808063-31808121)
chr2 (86-139)||(5367198-5367251)
chr2 (92-137)||(10535765-10535810)
chr2 (82-139)||(18622612-18622669)
chr2 (86-159)||(20242727-20242800)
chr2 (101-138)||(21782833-21782870)
chr2 (69-138)||(27286275-27286344)
chr2 (70-135)||(34337165-34337225)
chr2 (103-135)||(11308021-11308053)
chr2 (82-138)||(18420430-18420486)
chr2 (101-137)||(19573986-19574022)
chr2 (101-137)||(23921261-23921297)
chr2 (101-137)||(28412358-28412394)
chr2 (92-144)||(34221503-34221555)
chr2 (86-138)||(34691805-34691857)
chr2 (86-138)||(34714217-34714269)
chr2 (69-137)||(36281693-36281761)
chr2 (64-135)||(36409607-36409676)
chr2 (101-137)||(40361769-40361805)
[»] chr3 (71 HSPs)
chr3 (22-153)||(34910309-34910434)
chr3 (86-177)||(10954919-10955011)
chr3 (69-153)||(14209105-14209189)
chr3 (92-166)||(20503444-20503518)
chr3 (86-172)||(21479091-21479177)
chr3 (20-158)||(4987220-4987363)
chr3 (22-172)||(15796225-15796386)
chr3 (86-159)||(16000016-16000089)
chr3 (76-153)||(28812507-28812584)
chr3 (22-170)||(34185054-34185207)
chr3 (76-144)||(1509540-1509608)
chr3 (82-177)||(14747529-14747625)
chr3 (84-172)||(28917968-28918062)
chr3 (86-178)||(55401036-55401134)
chr3 (69-143)||(41961633-41961707)
chr3 (80-138)||(49651780-49651838)
chr3 (81-172)||(3164020-3164117)
chr3 (76-137)||(16192740-16192801)
chr3 (92-144)||(26508111-26508163)
chr3 (69-144)||(750601-750676)
chr3 (69-156)||(14832088-14832175)
chr3 (82-177)||(39756204-39756299)
chr3 (77-159)||(14829676-14829757)
chr3 (80-138)||(25948881-25948939)
chr3 (22-144)||(27505247-27505368)
chr3 (86-144)||(51206353-51206411)
chr3 (86-159)||(8587021-8587094)
chr3 (21-153)||(29508436-29508568)
chr3 (92-144)||(21256992-21257044)
chr3 (69-159)||(3610619-3610710)
chr3 (75-138)||(8039824-8039887)
chr3 (86-177)||(8789550-8789641)
chr3 (69-144)||(14216893-14216968)
chr3 (69-144)||(14223022-14223097)
chr3 (76-159)||(17005609-17005692)
chr3 (93-159)||(10268493-10268559)
chr3 (86-159)||(25775494-25775568)
chr3 (86-159)||(10335286-10335359)
chr3 (86-138)||(7928457-7928509)
chr3 (92-144)||(35994744-35994795)
chr3 (110-166)||(40052311-40052367)
chr3 (83-138)||(4990964-4991019)
chr3 (79-138)||(9800047-9800106)
chr3 (24-138)||(11665951-11666070)
chr3 (102-144)||(14979182-14979224)
chr3 (75-137)||(16789020-16789082)
chr3 (101-159)||(18426935-18426993)
chr3 (102-164)||(41319326-41319388)
chr3 (75-137)||(55212971-55213032)
chr3 (93-138)||(11610528-11610573)
chr3 (86-159)||(26492205-26492278)
chr3 (86-166)||(40993335-40993416)
chr3 (86-138)||(8383264-8383316)
chr3 (86-144)||(8593137-8593196)
chr3 (80-158)||(11155012-11155094)
chr3 (93-139)||(12083909-12083955)
chr3 (92-138)||(34307786-34307832)
chr3 (77-138)||(1550147-1550208)
chr3 (101-138)||(11251985-11252022)
chr3 (101-154)||(12703998-12704051)
chr3 (83-144)||(15314873-15314934)
chr3 (79-144)||(22774063-22774128)
chr3 (92-137)||(24205047-24205092)
chr3 (21-54)||(25948847-25948880)
chr3 (92-137)||(35312062-35312107)
chr3 (101-165)||(1438784-1438848)
chr3 (101-137)||(4201404-4201440)
chr3 (101-153)||(8412960-8413012)
chr3 (85-172)||(14027982-14028067)
chr3 (93-172)||(33359733-33359813)
chr3 (86-138)||(38731225-38731277)
[»] scaffold0223 (1 HSPs)
scaffold0223 (78-178)||(20133-20239)
[»] scaffold0019 (1 HSPs)
scaffold0019 (22-177)||(71691-71853)
[»] chr4 (72 HSPs)
chr4 (22-144)||(24613632-24613759)
chr4 (69-144)||(51701259-51701334)
chr4 (22-159)||(3947703-3947839)
chr4 (57-163)||(50280863-50280970)
chr4 (79-159)||(19482654-19482734)
chr4 (22-153)||(32273463-32273593)
chr4 (86-144)||(21945504-21945562)
chr4 (86-144)||(54580023-54580081)
chr4 (69-142)||(4383371-4383443)
chr4 (86-172)||(23292986-23293078)
chr4 (82-138)||(11596348-11596404)
chr4 (84-159)||(30298932-30299008)
chr4 (84-159)||(30327800-30327876)
chr4 (22-138)||(30982809-30982930)
chr4 (86-153)||(2361975-2362042)
chr4 (82-144)||(12708147-12708210)
chr4 (80-138)||(12895110-12895168)
chr4 (23-153)||(28084513-28084640)
chr4 (92-138)||(29205451-29205497)
chr4 (93-138)||(28964255-28964300)
chr4 (124-172)||(7377342-7377390)
chr4 (86-165)||(42640506-42640588)
chr4 (86-140)||(12797338-12797391)
chr4 (76-138)||(47263993-47264055)
chr4 (69-138)||(847958-848027)
chr4 (92-137)||(6485617-6485662)
chr4 (99-171)||(14465088-14465161)
chr4 (94-159)||(40481623-40481687)
chr4 (76-159)||(22234880-22234964)
chr4 (87-159)||(35157986-35158058)
chr4 (94-138)||(37203271-37203315)
chr4 (93-153)||(38847019-38847079)
chr4 (86-153)||(49431017-49431085)
chr4 (94-152)||(715615-715674)
chr4 (94-152)||(752941-753000)
chr4 (86-172)||(4157125-4157208)
chr4 (86-153)||(12895274-12895341)
chr4 (101-168)||(15029742-15029809)
chr4 (86-153)||(16073387-16073453)
chr4 (83-137)||(16303263-16303317)
chr4 (94-144)||(27706185-27706235)
chr4 (92-158)||(31800484-31800550)
chr4 (101-159)||(36635310-36635368)
chr4 (67-137)||(40742599-40742669)
chr4 (70-135)||(13134460-13134525)
chr4 (77-138)||(38148716-38148777)
chr4 (21-85)||(482184-482248)
chr4 (86-138)||(8423718-8423770)
chr4 (92-159)||(24543967-24544035)
chr4 (78-166)||(46160875-46160963)
chr4 (74-137)||(11931288-11931351)
chr4 (122-177)||(15835675-15835730)
chr4 (75-138)||(30838217-30838280)
chr4 (94-144)||(11651142-11651192)
chr4 (86-144)||(34306804-34306861)
chr4 (75-164)||(35723373-35723463)
chr4 (86-131)||(6879465-6879510)
chr4 (92-137)||(19230315-19230360)
chr4 (92-137)||(24343515-24343560)
chr4 (99-136)||(44796975-44797012)
chr4 (103-136)||(46180953-46180986)
chr4 (101-137)||(903930-903966)
chr4 (113-161)||(1074782-1074830)
chr4 (81-137)||(5775353-5775409)
chr4 (93-137)||(14126118-14126162)
chr4 (75-127)||(19312353-19312405)
chr4 (92-138)||(20633492-20633535)
chr4 (101-137)||(22440615-22440651)
chr4 (82-137)||(28000738-28000794)
chr4 (69-144)||(31602989-31603067)
chr4 (101-137)||(32910559-32910595)
chr4 (101-137)||(40179651-40179687)
[»] scaffold0361 (1 HSPs)
scaffold0361 (95-155)||(14520-14580)
[»] scaffold0103 (1 HSPs)
scaffold0103 (94-159)||(51797-51862)
[»] scaffold0011 (1 HSPs)
scaffold0011 (87-144)||(17750-17807)
[»] scaffold0136 (1 HSPs)
scaffold0136 (69-137)||(3832-3900)
[»] scaffold0450 (1 HSPs)
scaffold0450 (69-144)||(8618-8693)
[»] scaffold0306 (1 HSPs)
scaffold0306 (21-159)||(13386-13524)
[»] scaffold0152 (1 HSPs)
scaffold0152 (21-159)||(21803-21941)
[»] scaffold0050 (1 HSPs)
scaffold0050 (86-137)||(70286-70337)
[»] scaffold0044 (1 HSPs)
scaffold0044 (27-170)||(53153-53303)
[»] scaffold0018 (2 HSPs)
scaffold0018 (93-159)||(178825-178892)
scaffold0018 (93-137)||(192256-192300)
[»] scaffold0003 (1 HSPs)
scaffold0003 (69-159)||(241580-241670)
[»] scaffold0652 (1 HSPs)
scaffold0652 (86-138)||(462-514)
[»] scaffold0122 (1 HSPs)
scaffold0122 (86-166)||(7989-8068)
[»] scaffold0027 (1 HSPs)
scaffold0027 (86-137)||(46690-46741)
[»] scaffold0025 (1 HSPs)
scaffold0025 (83-137)||(23777-23832)
[»] scaffold0036 (1 HSPs)
scaffold0036 (22-139)||(9678-9800)
[»] scaffold0021 (1 HSPs)
scaffold0021 (92-172)||(130449-130535)
[»] scaffold0008 (1 HSPs)
scaffold0008 (76-138)||(263362-263424)
[»] scaffold0004 (3 HSPs)
scaffold0004 (93-159)||(92793-92859)
scaffold0004 (87-163)||(123607-123686)
scaffold0004 (85-133)||(83172-83220)
[»] scaffold0246 (1 HSPs)
scaffold0246 (94-159)||(19562-19626)
[»] scaffold0227 (1 HSPs)
scaffold0227 (94-155)||(7319-7380)
[»] scaffold0053 (1 HSPs)
scaffold0053 (86-159)||(8784-8857)
[»] scaffold1528 (1 HSPs)
scaffold1528 (77-153)||(1027-1103)
[»] scaffold0793 (1 HSPs)
scaffold0793 (94-152)||(4891-4950)
[»] scaffold0171 (2 HSPs)
scaffold0171 (80-127)||(23438-23485)
scaffold0171 (69-127)||(23529-23587)
[»] scaffold0049 (2 HSPs)
scaffold0049 (87-138)||(63780-63831)
scaffold0049 (78-135)||(56932-56989)
[»] scaffold0722 (1 HSPs)
scaffold0722 (94-144)||(7040-7090)
[»] scaffold0123 (1 HSPs)
scaffold0123 (77-171)||(44516-44610)
[»] scaffold0020 (1 HSPs)
scaffold0020 (82-152)||(135308-135378)
[»] scaffold0022 (1 HSPs)
scaffold0022 (87-159)||(90829-90901)
[»] scaffold0057 (1 HSPs)
scaffold0057 (70-152)||(24018-24099)
[»] scaffold0376 (1 HSPs)
scaffold0376 (77-138)||(6319-6380)
[»] scaffold0086 (1 HSPs)
scaffold0086 (26-127)||(2946-3052)
[»] scaffold0083 (1 HSPs)
scaffold0083 (86-119)||(45530-45563)
[»] scaffold0623 (1 HSPs)
scaffold0623 (69-125)||(5979-6035)


Alignment Details
Target: scaffold0066 (Bit Score: 277; Significance: 1e-155; HSPs: 3)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 98 - 547
Target Start/End: Original strand, 33375 - 33814
Alignment:
Q  98 ttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtccttatc-----ttcatagctatgaac 192  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| || |||||  ||||||||||||||||||||||     |||||||||||||||    
T  33375 ttgtaattacactgaattatgttattttttcaaattattagctgtgtcggcgtgtc--tgtcgtgtccggtgtccttatccgtgcttcatagctatgaac 33472  T
Q  193 cagattgaaaggaaagtggtggagattagactgacattgaaaggaaggtgtaagatgggaaaat--gaaaagaagtaatagaattgtccaaattctgata 290  Q
    ||||||||||||||||  || ||||||||||||||||||||||| ||||| ||| |||||||||  |||||||||| |||||||||||||||||||||||    
T  33473 cagattgaaaggaaagcagtagagattagactgacattgaaagggaggtgaaaggtgggaaaatatgaaaagaagtcatagaattgtccaaattctgata 33572  T
Q  291 ctctttgggttttggggagccattgaaggctgaggtgcatgccgtgatgtctaaaagtctccgaatatgcgtcacagccacctcttccgtgtcatactcc 390  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                  ||    
T  33573 ctctttgggttttggggagccattgaaggctgaggtgcatgccgtgatgtctaaaagtctccgaatatgcgtcacagcca------------------cc 33654  T
Q  391 tctgaaaaat---aacaatattgttagtgatcatgtgtgtgtaattgtatacaaaagactatgttgaatggagttagtttaccttgcacaattgaaacat 487  Q
    ||||||||||   ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  33655 tctgaaaaataacaacaatattgttagtgatcatatgtgtgtaattgtatacaaaagactaagttgaatggagttagtttaccttgcacaattgaaacgt 33754  T
Q  488 gacatggtttcagtgatacgagttccatattatctttcagcctcacaccttgaacctgtg 547  Q
    ||||||||||||||||||||| |||||  ||||||||||||||||||||| |||||||||    
T  33755 gacatggtttcagtgatacgatttccacgttatctttcagcctcacacctcgaacctgtg 33814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 293 - 547
Target Start/End: Original strand, 31218 - 31486
Alignment:
Q  293 ctttgggttttggggagccattgaaggctgaggtgcatgccgtgatgtctaaaagtctccgaatatgcgtcacagccacctcttccgtgtcatactcctc 392  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||    
T  31218 ctttgggttttggggagccattgaaggttgaggtgcatgccgtgatgtctaaaagtctccgaatatgcgtcaccgccacctcttccgtgttgtactcctc 31317  T
Q  393 tgaaaaat---aacaatattgttagtgatcatgtgtgtgtaattgtatacaaaagactatgttgaatggagttagt-----------ttaccttgcacaa 478  Q
    ||||||||   ||||||||||||||||||||| ||| |||||||||||||| ||||||| |||||||  |||||||           ||||||||||| |    
T  31318 tgaaaaataacaacaatattgttagtgatcatatgtatgtaattgtatacacaagactaagttgaattaagttagttggttagttagttaccttgcacga 31417  T
Q  479 ttgaaacatgacatggtttcagtgatacgagttccatattatctttcagcctcacaccttgaacctgtg 547  Q
    |||||||||||||||||||||||||||||| |||||  ||||||||||||||| ||||| |||||||||    
T  31418 ttgaaacatgacatggtttcagtgatacgatttccacgttatctttcagcctctcacctcgaacctgtg 31486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 185 - 281
Target Start/End: Original strand, 31061 - 31157
Alignment:
Q  185 ctatgaaccagattgaaaggaaagtggtggagattagactgacattgaaaggaaggtgtaagatgggaaaatgaaaagaagtaatagaattgtccaa 281  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||    
T  31061 ctatgaaccagattgaaaggaaagcattggagattagactgacattgaaagggaggtgtaaggtgggaaaatgaaaagaagtcatagaattgtccaa 31157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 7e-32; HSPs: 84)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 22 - 159
Target Start/End: Complemental strand, 16766825 - 16766683
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgtt-----cgacaccgacacgacatcgacacttgtaattacactgaatta 116  Q
    ||||||||||||||||| | ||||||| |||||  |||| || ||||||||||     |||||||||||||||| |||||||||||||||||||||||||    
T  16766825 atgaagcacggacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaatta 16766726  T
Q  117 tgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||| |||||||||||||||||| ||||| || ||||| |||||    
T  16766725 tgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 16766683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 69 - 172
Target Start/End: Original strand, 5970091 - 5970194
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggt 168  Q
    ||||| |||||||||||||||| | ||| |||||||||||||||||||||| |||||||||||||||||  ||||| |  ||||||||||| ||||||||    
T  5970091 cgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcgacgtgtccgtgtcatgtccggt 5970190  T
Q  169 gtcc 172  Q
    ||||    
T  5970191 gtcc 5970194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 22 - 159
Target Start/End: Original strand, 10770609 - 10770747
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgt-tcgacaccgacacgacatcgacacttgtaattacactgaattatgtt 120  Q
    |||||||||||||| ||||  |||||| | |||  ||| ||| ||||||||| |||   | ||||||||| ||||||||||||||||||||||||||||     
T  10770609 atgaagcacggacactcctcagattaggcatgtcccggcatcggacacgtgtgtcgtgtctgacacgacaccgacacttgtaattacactgaattatgtg 10770708  T
Q  121 attttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||||||||||||||||||||||| || ||||| |||||    
T  10770709 attttttcaaattattagttgtgttggcgtgtcagtgtc 10770747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 70 - 172
Target Start/End: Original strand, 9107354 - 9107462
Alignment:
Q  70 gtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtagg------tgtgtccgtgtcgtgt 163  Q
    |||| |||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||| ||||| ||       |||||||||||||||    
T  9107354 gtgtccgacaccgacacgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgt 9107453  T
Q  164 ccggtgtcc 172  Q
    |||||||||    
T  9107454 ccggtgtcc 9107462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 22 - 159
Target Start/End: Complemental strand, 12696446 - 12696310
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgtta 121  Q
    ||||||||| |||| ||||||||| ||  ||||  |||| |||||||||||| ||   |||||||||||  ||||||||||||||||||||||||||| |    
T  12696446 atgaagcacagacactccttggataaggtgtgtcccggtgtcagacacgtgt-cgtgtccgacacgacactgacacttgtaattacactgaattatgtaa 12696348  T
Q  122 ttttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||||||||||||||| ||||| || ||||| |||||    
T  12696347 ttttttcaaattattagctgtgtcggcgtgtcagtgtc 12696310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 8365502 - 8365592
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| ||| |||||||||||| |||||||||||||||||| ||||||||| || ||||||||||||||||||||| || ||||| |||||    
T  8365502 cgtgtccgataccgacacgacaccgacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtc 8365592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 69 - 158
Target Start/End: Complemental strand, 26562765 - 26562676
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgt 158  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||| ||||||| ||||  |||| || ||||||||||    
T  26562765 cgtgttcgacaccgacacgacatcgacacatataattacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgtccgtgt 26562676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 86 - 172
Target Start/End: Complemental strand, 34595193 - 34595101
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtg------tgtccgtgtcgtgtccggtgtcc 172  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| || |      |||||||||||||||||||||||    
T  34595193 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtcc 34595101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 69 - 172
Target Start/End: Complemental strand, 8714056 - 8713952
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgtta-ttttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccgg 167  Q
    ||||| |||||||||||||||| | ||| |||||||||||||||||||||| | ||||||||||||||||  ||||| |  |||||| |||| |||||||    
T  8714056 cgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgatttttttcaaattattaactgtgtcgacgtgtccatgtcatgtccgg 8713957  T
Q  168 tgtcc 172  Q
    |||||    
T  8713956 tgtcc 8713952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 86 - 153
Target Start/End: Original strand, 7977830 - 7977897
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtc 153  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||| || |||||    
T  7977830 cgacaccgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtc 7977897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 75 - 138
Target Start/End: Complemental strand, 9522961 - 9522898
Alignment:
Q  75 cgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    |||||||||||| ||| |||||||||||||||||||||||||||| ||||||| ||||||||||    
T  9522961 cgacaccgacacaacaccgacacttgtaattacactgaattatgtgatttttttaaattattag 9522898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 16833361 - 16833294
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||| || ||||| |||||    
T  16833361 cgacacttgtaattacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 16833294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 86 - 172
Target Start/End: Complemental strand, 28715354 - 28715270
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtcc 172  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||  ||||    |||||||| |||||||||||||||    
T  28715354 cgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagccgtgt--cagtgtccgtatcgtgtccggtgtcc 28715270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 83 - 142
Target Start/End: Complemental strand, 31384982 - 31384923
Alignment:
Q  83 acacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgt 142  Q
    ||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31384982 acacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagttgt 31384923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 853859 - 853956
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtg------tccgtgtcgtgtccggtgtccttatc 177  Q
    ||||| |||||||||||||| |||| |||||||| |||||||||||||||||||||||| || |||      ||||||||||||||||||||| ||||    
T  853859 cgacaccgacacttgtaattgcacttaattatgtgattttttcaaattattagttgtgtcggcgtgtcagcatccgtgtcgtgtccggtgtccgtatc 853956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 7801156 - 7801214
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  7801156 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgt 7801214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 1681812 - 1681759
Alignment:
Q  91 tcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  1681812 tcgacacttgtaattacactgaattacgtgattttttcaaattattagttgtgt 1681759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 8776981 - 8777046
Alignment:
Q  94 acacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||| || ||||| |||||    
T  8776981 acacttgtaattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 8777046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 76 - 144
Target Start/End: Original strand, 8931592 - 8931660
Alignment:
Q  76 gacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    |||||||||||||||||||||| | |||||| |||||||||||||||||| ||||||| |||| |||||    
T  8931592 gacaccgacacgacatcgacacatataattatactgaattatgttattttctcaaatttttagctgtgt 8931660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 156
Target Start/End: Original strand, 32978842 - 32978970
Alignment:
Q  23 tgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgt-ta 121  Q
    ||||||||||||| ||||||||||||||||||  |||| || |||| |||| ||   |||||||     ||||||||||||||||||| |||||||| |     
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggacatgtgt-cgtgtccgacac-----cgacacttgtaattacacttaattatgtgtt 32978935  T
Q  122 ttttttcaaattattagttgtgtaggtgtgtccgt 156  Q
    ||||||||||||||||| ||||| || ||||||||    
T  32978936 ttttttcaaattattagctgtgtcggcgtgtccgt 32978970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 82 - 146
Target Start/End: Original strand, 9911524 - 9911589
Alignment:
Q  82 gacacgacatcgacacttgtaattacactgaattatgttattt-tttcaaattattagttgtgtag 146  Q
    ||||||||| |||||||||||||||||||||||||||| |||| ||| |||||||||| |||||||    
T  9911524 gacacgacaccgacacttgtaattacactgaattatgtgatttcttttaaattattagctgtgtag 9911589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 22 - 159
Target Start/End: Complemental strand, 10842650 - 10842518
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgtta 121  Q
    |||||||||||||| |||| ||||||| |||||  |||||     ||| ||| |||||||||||||   ||||||| | | |||||||| |||||||| |    
T  10842650 atgaagcacggacactcctcggattagccgtgtctcggta-----cacatgtccgacaccgacacgtgttcgacacatatgattacactaaattatgtga 10842556  T
Q  122 ttttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||||||||||||||||  |||| || |||||||||||    
T  10842555 ttttttcaaattattagcggtgtcggcgtgtccgtgtc 10842518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 15489733 - 15489790
Alignment:
Q  87 gacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    |||| ||||||||||||||||| |||||| ||| ||||||||||||||||||||||||    
T  15489733 gacaccgacacttgtaattacattgaattgtgtaattttttcaaattattagttgtgt 15489790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 17841589 - 17841662
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| || |||||||||||||||| |||||||| |||||||||||||||||| ||||| || ||||| |||||    
T  17841589 cgacaccgtcacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 17841662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 70 - 159
Target Start/End: Original strand, 21395292 - 21395380
Alignment:
Q  70 gtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||| |||||| ||||||||| ||||||||||||||||||| ||||||| |||||| ||||||||||||  |||| || ||||| |||||    
T  21395292 gtgtccgacactgacacgacaccgacacttgtaattacactaaattatg-tattttctcaaattattagcggtgttggcgtgtcggtgtc 21395380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 88 - 144
Target Start/End: Original strand, 1191702 - 1191758
Alignment:
Q  88 acatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    |||||||||||||||||||||||||||| ||| | |||||||||||||||| |||||    
T  1191702 acatcgacacttgtaattacactgaattttgtgaatttttcaaattattagctgtgt 1191758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 80 - 164
Target Start/End: Complemental strand, 2117140 - 2117057
Alignment:
Q  80 ccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtc 164  Q
    ||||||||||| |||||||| ||||| || |||||||||| ||||||||||||||||||  |||| || |||||||| |||||||    
T  2117140 ccgacacgaca-cgacacttataattgcattgaattatgtgattttttcaaattattagaggtgtcggagtgtccgtatcgtgtc 2117057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 6349720 - 6349788
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    ||||||||||| | ||||| |||| |||| |||||||||| |||||||||| |||||||||||||||||    
T  6349720 cgtgttcgacatcaacacggcatcaacacatgtaattacaatgaattatgtaattttttcaaattatta 6349788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 164
Target Start/End: Complemental strand, 3209441 - 3209362
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttatttttt-caaattattagttgtgtaggtgtgtccgtgtcgtgtc 164  Q
    ||||| ||||||||||||| ||||| |||||||| ||||||| ||||||||||| ||||| || ||||| ||||||||||    
T  3209441 cgacaccgacacttgtaataacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtctgtgtcgtgtc 3209362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 6327518 - 6327569
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    ||||||||||||||||||||||||| |||||| | |||||||||||||||||    
T  6327518 cgacatcgacacttgtaattacacttaattatataattttttcaaattatta 6327569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 172
Target Start/End: Original strand, 16488573 - 16488676
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggt 168  Q
    ||||| |||||||||||||||| |||||| | ||||||||||| ||| ||| ||||| | |||  ||||| ||||| || |||||| |||||| ||||||    
T  16488573 cgtgtccgacaccgacacgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtccatgtcgtttccggt 16488672  T
Q  169 gtcc 172  Q
    ||||    
T  16488673 gtcc 16488676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 144
Target Start/End: Complemental strand, 17302620 - 17302557
Alignment:
Q  82 gacacgacatcgacacttgtaattacactgaattatgtta-ttttttcaaattattagttgtgt 144  Q
    |||||||||  |||||||||||||||| |||||||||| | |||||||||||||||||||||||    
T  17302620 gacacgacaatgacacttgtaattacattgaattatgtgatttttttcaaattattagttgtgt 17302557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 31959212 - 31959161
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattattagttgtg 143  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||| ||||    
T  31959212 cgacacttgtaattacactgcattatgtgattttttcaaattattagctgtg 31959161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 82 - 144
Target Start/End: Complemental strand, 7930368 - 7930306
Alignment:
Q  82 gacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||||||| ||||||||| |||| |||| |||||||| ||||||||||||||||| ||||||    
T  7930368 gacacgacaccgacacttgaaatttcactaaattatgtgattttttcaaattattaattgtgt 7930306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 426514 - 426587
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| ||||||||||||||||| | |||||||| |||||||||||||||||  ||||| || ||||| |||||    
T  426514 cgacaccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtc 426587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 103 - 172
Target Start/End: Original strand, 19602198 - 19602267
Alignment:
Q  103 attacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtcc 172  Q
    ||||||||||||||| | ||||| |||||||||||   |||| ||||||||||||| |||||||||||||    
T  19602198 attacactgaattatatcattttctcaaattattatcagtgttggtgtgtccgtgttgtgtccggtgtcc 19602267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 159
Target Start/End: Complemental strand, 28152157 - 28152085
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| |||||||||||||||||||||||||||| | |||||||||||||||| | ||| || ||||| |||||    
T  28152157 cgacaccgacacttgtaattacactgaattatgtga-tttttcaaattattagctttgtcggcgtgtcagtgtc 28152085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 785440 - 785488
Alignment:
Q  71 tgttcgacaccgacacgacatcgacacttgtaattacactgaattatgt 119  Q
    |||||||||||||||||||| |||||||||| |||||| ||||||||||    
T  785440 tgttcgacaccgacacgacaccgacacttgtgattacattgaattatgt 785488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 153
Target Start/End: Complemental strand, 4878002 - 4877934
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgtta-ttttttcaaattattagttgtgtaggtgtgtc 153  Q
    ||||| ||||||||||||||| ||| |||||||| | ||||||||||||||||| ||||| ||||||||    
T  4878002 cgacaccgacacttgtaattatacttaattatgtgacttttttcaaattattagctgtgtcggtgtgtc 4877934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 6898281 - 6898333
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||| ||||||||||||||||||| |||||||| |||| |||||||||||||    
T  6898281 cgacaccgacacttgtaattacacttaattatgtaatttgttcaaattattag 6898333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 7938174 - 7938102
Alignment:
Q  87 gacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||| |||||||| |||||||||| |||||| | |||||||||||||||||| ||||| || ||||| |||||    
T  7938174 gacaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtc 7938102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 9025490 - 9025546
Alignment:
Q  82 gacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||||||| |||||| | ||||||||||||||||||| ||||| ||||||||||||    
T  9025490 gacacgacaccgacacatataattacactgaattatgtgattttctcaaattattag 9025546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 17435250 - 17435206
Alignment:
Q  94 acacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||    
T  17435250 acacttgtaattacactgaattatgtaattttttaaaattattag 17435206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 403864 - 403915
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    ||||| ||||||||||| ||||||| |||||||| |||||||||||||||||    
T  403864 cgacaccgacacttgtagttacactaaattatgtgattttttcaaattatta 403915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 66 - 137
Target Start/End: Complemental strand, 9617513 - 9617442
Alignment:
Q  66 acacgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    |||||||| ||||||||  |||||| |||||| | |||||||| |||||||||| ||||| |||||||||||    
T  9617513 acacgtgtccgacaccgcgacgacaccgacacatataattacattgaattatgtgattttctcaaattatta 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 87 - 138
Target Start/End: Complemental strand, 13851794 - 13851743
Alignment:
Q  87 gacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||||||||| | |||||||||||||||| |||||||| ||||||||||||    
T  13851794 gacatcgacacatataattacactgaattacgttattttctcaaattattag 13851743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 101 - 144
Target Start/End: Original strand, 34225824 - 34225867
Alignment:
Q  101 taattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  34225824 taattacactgaattatgcgattttttcaaattattagttgtgt 34225867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 2224291 - 2224233
Alignment:
Q  80 ccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    |||||||||| |||| | |||||||||||||||||||| | ||||||| ||||||||||    
T  2224291 ccgacacgacgtcgatatttgtaattacactgaattatatgatttttttaaattattag 2224233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 138
Target Start/End: Original strand, 9195744 - 9195806
Alignment:
Q  76 gacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    |||||| |||||||| |||||| | |||||||||| |||||||| ||||| ||||||||||||    
T  9195744 gacacctacacgacaccgacacatataattacactaaattatgtcattttctcaaattattag 9195806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 144
Target Start/End: Original strand, 17327592 - 17327713
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgtta 121  Q
    |||||||||||||| |||| ||||||| |||||  | || |||||||||||| ||   |||||||||||  ||||| | || ||||||| |||||||| |    
T  17327592 atgaagcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgt-cgtgtccgacacgacactgacacatatagttacactaaattatgtga 17327690  T
Q  122 ttttttcaaattattagttgtgt 144  Q
    |||| ||||| | ||||||||||    
T  17327691 ttttctcaaaatcttagttgtgt 17327713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 138
Target Start/End: Original strand, 34073337 - 34073399
Alignment:
Q  76 gacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||||||||||||| |||| | | ||||||||||||||||||  ||||| ||||||||||||    
T  34073337 gacaccgacacgacaccgacccatataattacactgaattatgagattttctcaaattattag 34073399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 7265593 - 7265666
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| |||||| | ||||||||||||||||||| ||||| ||||||||||||  |||| || ||||| |||||    
T  7265593 cgacaccgacacatataattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtc 7265666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 86 - 171
Target Start/End: Complemental strand, 7378038 - 7377953
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtc 171  Q
    ||||| |||||| | |||||||| |||||||||| ||||| ||||||| ||||  |||| || ||||| |||| ||||||||||||    
T  7378038 cgacaccgacacatataattacattgaattatgtgattttctcaaatttttagcggtgtcggggtgtctgtgttgtgtccggtgtc 7377953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 159
Target Start/End: Complemental strand, 3398680 - 3398605
Alignment:
Q  83 acacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||||||| ||| |||| ||||||||||||||||| | | |||||||||||||||| ||||| || ||||| |||||    
T  3398680 acacgacaccgatacttataattacactgaattatatga-tttttcaaattattagctgtgtcggcgtgtcagtgtc 3398605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 12627577 - 12627629
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    |||||||||||| | | ||||||||||||||||| ||||||||| ||||||||    
T  12627577 cgacatcgacacatattattacactgaattatgtgattttttcacattattag 12627629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 137
Target Start/End: Original strand, 17341671 - 17341715
Alignment:
Q  93 gacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    ||||||| ||||||||||||||||||| ||||| |||||||||||    
T  17341671 gacacttataattacactgaattatgtgattttatcaaattatta 17341715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 137
Target Start/End: Original strand, 18252742 - 18252802
Alignment:
Q  77 acaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    |||| ||||||| | |||||| |||||||||||| |||||||| ||||||| |||||||||    
T  18252742 acacagacacgataccgacacctgtaattacactaaattatgtcatttttttaaattatta 18252802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 25010212 - 25010260
Alignment:
Q  96 acttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||||||| || ||||||||||| |||||||||||||||||| |||||    
T  25010212 acttgtaataacgctgaattatgtgattttttcaaattattagctgtgt 25010260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 137
Target Start/End: Original strand, 4118341 - 4118384
Alignment:
Q  94 acacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    ||||||||||||||| | |||||||| |||||||||||||||||    
T  4118341 acacttgtaattacatttaattatgtgattttttcaaattatta 4118384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 7569183 - 7569251
Alignment:
Q  101 taattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtc 171  Q
    ||||||||||||||||||| ||||| |||||||||||  ||||| |  |||||| |||||| |||||||||    
T  7569183 taattacactgaattatgtaattttctcaaattattatctgtgttg--gtgtccatgtcgtatccggtgtc 7569251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 12868710 - 12868761
Alignment:
Q  121 attttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtcc 172  Q
    |||||||||||||||||  ||||| || ||||| ||||||||||||||||||    
T  12868710 attttttcaaattattaactgtgtcggcgtgtcagtgtcgtgtccggtgtcc 12868761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 166
Target Start/End: Original strand, 16111746 - 16111837
Alignment:
Q  75 cgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccg 166  Q
    |||| |||||||||||  ||||| | |||||||||| |||||||| |||| |||||| |||||||  ||| ||  |||| ||||||||||||    
T  16111746 cgactccgacacgacactgacacctataattacactaaattatgtaatttattcaaactattagtgctgttggcatgtcagtgtcgtgtccg 16111837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 136
Target Start/End: Original strand, 16388248 - 16388283
Alignment:
Q  101 taattacactgaattatgttattttttcaaattatt 136  Q
    ||||||||||||||||||| ||||||||||||||||    
T  16388248 taattacactgaattatgtgattttttcaaattatt 16388283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 30866150 - 30866217
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||||| | |||||||| |||||||||| ||||| ||||||||||||  |||| |||||||| |||||    
T  30866150 cgacacatataattacattgaattatgtgattttctcaaattattagcggtgttggtgtgtcggtgtc 30866217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 7151473 - 7151419
Alignment:
Q  84 cacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||||| | |||| | |||||||||| |||||||| ||||||||||||||||||    
T  7151473 cacgacaccaacacatataattacacttaattatgtgattttttcaaattattag 7151419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 138
Target Start/End: Original strand, 20576623 - 20576685
Alignment:
Q  76 gacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    |||| |||||||||| | |||||| ||||||||||||||||||  ||||| || |||||||||    
T  20576623 gacatcgacacgacaccaacacttataattacactgaattatgcaattttctcgaattattag 20576685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 24645539 - 24645481
Alignment:
Q  87 gacatcgacacttgtaattacactgaattatgtta-ttttttcaaattattagttgtgt 144  Q
    |||| |||||||||||| || |||||||||||| | ||||||||||||||||| |||||    
T  24645539 gacaccgacacttgtaactatactgaattatgtgatttttttcaaattattagctgtgt 24645481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 1532284 - 1532247
Alignment:
Q  101 taattacactgaattatgttattttttcaaattattag 138  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  1532284 taattacactgaattatgtaattttatcaaattattag 1532247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 135
Target Start/End: Complemental strand, 1700411 - 1700362
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattat 135  Q
    ||||| |||||||| ||||||||||||| ||||| ||||||| |||||||    
T  1700411 cgacaccgacacttataattacactgaaatatgtgatttttttaaattat 1700362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 159
Target Start/End: Complemental strand, 9027241 - 9027164
Alignment:
Q  82 gacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||||||| |||||| | ||||||||| ||||||||| ||| | ||||||||||||  |||| || ||||| |||||    
T  9027241 gacacgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtc 9027164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 177
Target Start/End: Complemental strand, 17302416 - 17302315
Alignment:
Q  76 gacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtcctta 175  Q
    ||||||||| | |||  ||||| | |||||||||  |||||||| ||||| | ||||||||||||||||   | |||| |||||||||| ||||||| ||    
T  17302416 gacaccgacccaacaatgacacatataattacacaaaattatgtgattttcttaaattattagttgtgtccatatgtcagtgtcgtgtcgggtgtcccta 17302317  T
Q  176 tc 177  Q
    ||    
T  17302316 tc 17302315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 19040396 - 19040359
Alignment:
Q  101 taattacactgaattatgttattttttcaaattattag 138  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  19040396 taattacactgaattatgtgattttctcaaattattag 19040359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 159
Target Start/End: Complemental strand, 19044527 - 19044450
Alignment:
Q  82 gacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||| |||| |||||| | |||| |||||||||||||| || || ||||||||||||| |||| || ||||| |||||    
T  19044527 gacatgacaccgacacatataataacactgaattatgtgatattctcaaattattagtcgtgtcggcgtgtcagtgtc 19044450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 159
Target Start/End: Complemental strand, 23771637 - 23771565
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| ||||| |||||||||||||||| ||| | ||||||| |||||||||  ||||| || |||||||||||    
T  23771637 cgacaccgacatttgtaattacactgaagtatataatttttt-aaattattaactgtgtcggcgtgtccgtgtc 23771565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 25038077 - 25038122
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    ||||| ||||||||||||| |||||||| ||||| |||||||||||    
T  25038077 cgacatttgtaattacactaaattatgtaattttctcaaattatta 25038122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 26402680 - 26402721
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttatttttt 127  Q
    ||||| |||||||||| ||||||||||||||||| |||||||    
T  26402680 cgacaccgacacttgtgattacactgaattatgtcatttttt 26402721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 33468397 - 33468434
Alignment:
Q  101 taattacactgaattatgttattttttcaaattattag 138  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  33468397 taattacattgaattaagttattttttcaaattattag 33468434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 144
Target Start/End: Original strand, 34290069 - 34290135
Alignment:
Q  76 gacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||| ||||||||| |||||| |  |||||||||||||||||| ||| |  |||||||||||||||||    
T  34290069 gacactgacacgacaccgacacat--aattacactgaattatgtgattctcgcaaattattagttgtgt 34290135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 7086858 - 7086802
Alignment:
Q  82 gacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||| ||| |||||| | |||||||||| |||||||| ||||| ||||||||||||    
T  7086858 gacactacaccgacacatataattacactaaattatgtgattttctcaaattattag 7086802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 9658997 - 9658945
Alignment:
Q  22 atgaagcacggacattccttgg-attagacgtgttgcggtatcagacacgtgt 73  Q
    |||||||||||||| ||||||| ||||| |||||| |||| ||||||||||||    
T  9658997 atgaagcacggacactccttggaattaggcgtgttccggtgtcagacacgtgt 9658945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 22746033 - 22745989
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaa 113  Q
    ||||||||||| |||||||||| |||||||||| |||||| ||||    
T  22746033 cgtgttcgacagcgacacgacaccgacacttgtgattacattgaa 22745989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 101 - 137
Target Start/End: Original strand, 31579240 - 31579276
Alignment:
Q  101 taattacactgaattatgttattttttcaaattatta 137  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  31579240 taattacactgaattatgtgattttctcaaattatta 31579276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 32511674 - 32511718
Alignment:
Q  94 acacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    |||||| ||||||||||||||||||| ||||| | ||||||||||    
T  32511674 acacttataattacactgaattatgtgattttcttaaattattag 32511718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #84
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 33001289 - 33001341
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||| |||||| | |||||||| | |||||||| ||||||||||||||||||    
T  33001289 cgacaccgacacatataattacatttaattatgtgattttttcaaattattag 33001341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 1e-30; HSPs: 72)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 80 - 172
Target Start/End: Complemental strand, 31084388 - 31084296
Alignment:
Q  80 ccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtcc 172  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||| || ||||| ||||||||||||||||||    
T  31084388 ccgacacgacatcgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtcgtgtccggtgtcc 31084296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 22 - 144
Target Start/End: Complemental strand, 21542158 - 21542031
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgtt-----cgacaccgacacgacatcgacacttgtaattacactgaatta 116  Q
    |||| |||||||||||||||||||| | |||||  |||| || |||||||||      |||||||||||||||| |||||||||||||||||||||||||    
T  21542158 atgatgcacggacattccttggattcggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaatta 21542059  T
Q  117 tgttattttttcaaattattagttgtgt 144  Q
    |||||| |||| ||||||||||||||||    
T  21542058 tgttatctttttaaattattagttgtgt 21542031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 21522826 - 21522736
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||| ||||| || ||||| |||||    
T  21522826 cgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtc 21522736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 21533392 - 21533302
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||| ||||| || ||||| |||||    
T  21533392 cgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtc 21533302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 76 - 159
Target Start/End: Original strand, 21351895 - 21351978
Alignment:
Q  76 gacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||||||||| |||| |||||||||||||||||||||||||||| | |||||| ||||||||||||||| |||||||| |||||    
T  21351895 gacaccgacatgacaccgacacttgtaattacactgaattatgtgactttttccaattattagttgtgtcggtgtgtcagtgtc 21351978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 69 - 144
Target Start/End: Complemental strand, 39698617 - 39698542
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||| ||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  39698617 cgtgtccgacaccgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgt 39698542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 28 - 159
Target Start/End: Complemental strand, 17088402 - 17088270
Alignment:
Q  28 cacggacattccttggattagacgtgttgcggtatcagacacgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgtta-ttttt 126  Q
    |||||||| |||| ||||||| |||||  |||| || ||||||||  ||||||||||||||||  |||||||||||| ||||| |||||||| | |||||    
T  17088402 cacggacactcctcggattaggcgtgtcccggtgtcggacacgtgaccgacaccgacacgacagtgacacttgtaatcacactaaattatgtgatttttt 17088303  T
Q  127 tcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||||||||||| |||||  |||||||| ||||    
T  17088302 tcaaattattagatgtgtcagtgtgtccctgtc 17088270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 42893418 - 42893346
Alignment:
Q  87 gacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||| |||||||||||||||||||| ||||||| |||||||||||||||||| ||||| ||||||||||||||    
T  42893418 gacaccgacacttgtaattacactggattatgtgattttttcaaattattagctgtgtcggtgtgtccgtgtc 42893346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 21576745 - 21576803
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  21576745 cgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgt 21576803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 6247681 - 6247609
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgt 158  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||| || ||||| ||||    
T  6247681 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagtgt 6247609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 76 - 144
Target Start/End: Complemental strand, 7677774 - 7677706
Alignment:
Q  76 gacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||| |||||||||||||||||| |||||    
T  7677774 gacaccgacacgacaccgacacttctaattgcactgaattatgtgattttttcaaattattagctgtgt 7677706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 86 - 171
Target Start/End: Original strand, 21191056 - 21191147
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtagg------tgtgtccgtgtcgtgtccggtgtc 171  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||       |||||||||||||||||||||||    
T  21191056 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtcgtgtccggtgtc 21191147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 37328827 - 37328917
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| |||||||||||||||| |||||| ||||||||||||||||| ||| |||||| ||||||||| | ||||| ||||| || |||||    
T  37328827 cgtgtccgacaccgacacgacaccgacacatgtaattacactgaattttgtgatttttacaaattatttgctgtgtcggtgtatcagtgtc 37328917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 24 - 153
Target Start/End: Complemental strand, 41633856 - 41633727
Alignment:
Q  24 gaagcacggacattccttggattagacgtgttgcggtatcagacacgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttatt 123  Q
    |||||||||| | || ||| |||||| ||||  ||||||| |||| || |   ||||||| |||||| ||||| |||||||||||||||||||||| | |    
T  41633856 gaagcacggatactctttgaattagatgtgtatcggtatcggacatgtatctaacaccgatacgacaccgacatttgtaattacactgaattatgtaaat 41633757  T
Q  124 ttttcaaattattagttgtgtaggtgtgtc 153  Q
    ||||||||||||||| ||||| || |||||    
T  41633756 ttttcaaattattagctgtgtcggagtgtc 41633727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 86 - 138
Target Start/End: Complemental strand, 8420086 - 8420034
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  8420086 cgacaccgacacttgtaattacattgaattatgttattttttcaaattattag 8420034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 82 - 172
Target Start/End: Original strand, 13287395 - 13287491
Alignment:
Q  82 gacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt--aggt----gtgtccgtgtcgtgtccggtgtcc 172  Q
    ||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  |||||  | ||    ||||||||||||||||||||||||    
T  13287395 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtcgtgtccggtgtcc 13287491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 14674322 - 14674255
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||| ||||| || ||||| |||||    
T  14674322 cgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 14674255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 69 - 144
Target Start/End: Complemental strand, 19579777 - 19579702
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||| |||||| ||||||||| |||||||||||||| |||| |||||||| ||||| |||||||||||| |||||    
T  19579777 cgtgtccgacactgacacgacaccgacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgt 19579702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 86 - 153
Target Start/End: Complemental strand, 33178084 - 33178017
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtc 153  Q
    ||||| ||||||||||||||||||| |||||||| ||||||| |||||||||||||||| || |||||    
T  33178084 cgacaccgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgtc 33178017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 92 - 158
Target Start/End: Original strand, 24906307 - 24906373
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgt 158  Q
    |||||||||||||||||||||||||||| |||||||||||||||||  ||||| || ||||| ||||    
T  24906307 cgacacttgtaattacactgaattatgtcattttttcaaattattatctgtgttggcgtgtcagtgt 24906373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 138
Target Start/End: Complemental strand, 43001923 - 43001807
Alignment:
Q  21 aatgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgtt 120  Q
    ||||||||||||||| |||| ||||||| |||||   ||| |  ||||||||| ||   |||||||  || | ||||||||||||||||||||||||||     
T  43001923 aatgaagcacggacactcctcggattaggcgtgtccaggtgtttgacacgtgt-cgtgtccgacacatcaccaacacttgtaattacactgaattatgta 43001825  T
Q  121 attttttcaaattattag 138  Q
    ||||||||||||||||||    
T  43001824 attttttcaaattattag 43001807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 10298634 - 10298570
Alignment:
Q  80 ccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    |||| |||||| ||||||||||||||||| || ||||||| | ||||||||||||||||||||||    
T  10298634 ccgatacgacaccgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgt 10298570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 76 - 159
Target Start/End: Original strand, 19552535 - 19552616
Alignment:
Q  76 gacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||||||||||||||||||||||| ||  |||||| |||||||| |||||||||||||||||  ||||| || ||||| |||||    
T  19552535 gacaccgacacgacatcgacacttata--tacacttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtc 19552616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 2436985 - 2436890
Alignment:
Q  82 gacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtccttatc 177  Q
    ||||||||| |||||| | |||| |||  ||||||||| |||||| |||||||||||  |||| || ||||| |||||||||||||||||| ||||    
T  2436985 gacacgacaccgacacatataatcacaacgaattatgtgatttttgcaaattattagcggtgtcggcgtgtcagtgtcgtgtccggtgtccgtatc 2436890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 15405062 - 15405113
Alignment:
Q  93 gacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    |||||||||||||||| |||||||| | ||||||||||||||||||||||||    
T  15405062 gacacttgtaattacattgaattatatgattttttcaaattattagttgtgt 15405113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 172
Target Start/End: Complemental strand, 21814337 - 21814234
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggt 168  Q
    ||||| |||||||||||||||| |||||| | ||||||||||| ||| ||| ||||| | |||  ||||| ||||| || |||||| |||||| ||||||    
T  21814337 cgtgtccgacaccgacacgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtccatgtcgtttccggt 21814238  T
Q  169 gtcc 172  Q
    ||||    
T  21814237 gtcc 21814234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 41995545 - 41995457
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| ||||||||| ||| || ||||||||  ||||||| |||||||||| |||||||| ||||||||||||||| || ||||| |||||    
T  41995545 cgtgtccgacaccgatacggcaccgacactt--aattacattgaattatgtgattttttcgaattattagttgtgtcggcgtgtcagtgtc 41995457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 21319928 - 21319990
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaa 131  Q
    ||||| ||||||||||| ||||||||||||||| |||||| |||||||| | |||||||||||    
T  21319928 cgtgtccgacaccgacatgacatcgacacttgtgattacattgaattatatcattttttcaaa 21319990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 30183611 - 30183550
Alignment:
Q  83 acacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    |||||||| ||||||||||||||| || |||| |||| || |||||||||||||||||||||    
T  30183611 acacgacaccgacacttgtaattaaaccgaataatgtgatattttcaaattattagttgtgt 30183550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 70 - 138
Target Start/End: Complemental strand, 3966578 - 3966510
Alignment:
Q  70 gtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    |||| |||||| ||||||||| |||||| | ||||||||||||||| ||| ||||| ||||||||||||    
T  3966578 gtgtccgacactgacacgacaccgacacatataattacactgaattgtgtgattttctcaaattattag 3966510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 5894827 - 5894891
Alignment:
Q  80 ccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||||||||| ||||||||||| ||| | | |||||| | ||||||||||||||||||||||||    
T  5894827 ccgacacgacaccgacacttgtagttagattaaattatatgattttttcaaattattagttgtgt 5894891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 30135377 - 30135305
Alignment:
Q  82 gacacgacatcgacacttgtaattacactgaattatgtta-ttttttcaaattattagttgtgtaggtgtgtc 153  Q
    |||| |||| ||||||||||||||||| ||| |||||| | ||||||||||||||||||||||| || |||||    
T  30135377 gacatgacaccgacacttgtaattacaatgagttatgtgatttttttcaaattattagttgtgtcggcgtgtc 30135305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 41091253 - 41091309
Alignment:
Q  82 gacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    |||||||||||||||| | ||||||||||||||||||| ||||| |||||| |||||    
T  41091253 gacacgacatcgacacatataattacactgaattatgtgattttctcaaatcattag 41091309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 16374338 - 16374393
Alignment:
Q  82 gacacgacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    ||||||||| |||||| |||||||||||||| ||||||||||||||  ||||||||    
T  16374338 gacacgacaccgacacatgtaattacactgatttatgttatttttttcaattatta 16374393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 4105310 - 4105249
Alignment:
Q  94 acacttgtaattacactgaattatgt--tattttttcaaattattagttgtgtaggtgtgtc 153  Q
    ||||||||||||||||||||||||||  | ||||||||||||||||||| ||| || |||||    
T  4105310 acacttgtaattacactgaattatgtgatcttttttcaaattattagttatgtcggcgtgtc 4105249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 7218273 - 7218319
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    |||||||||||||||||||||||||||| |||| || ||||||||||    
T  7218273 cgacacttgtaattacactgaattatgtgatttatttaaattattag 7218319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 159
Target Start/End: Complemental strand, 14422961 - 14422890
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||||||| |||| ||||||||||||||||||| ||||||  |||||||||| ||| | |||||||| |||||    
T  14422961 cgacatcgaaacttataattacactgaattatgtgattttt--aaattattagctgtatcggtgtgtcagtgtc 14422890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 142
Target Start/End: Complemental strand, 40131690 - 40131624
Alignment:
Q  76 gacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgt 142  Q
    |||| ||| |||||| ||| | || |||||| |||||||||||| ||||||||||||||||||||||    
T  40131690 gacatcgatacgacaccgatatttataattaaactgaattatgtgattttttcaaattattagttgt 40131624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 6326304 - 6326345
Alignment:
Q  93 gacacttgtaattacactgaattatgttattttttcaaatta 134  Q
    ||||||||||||||||||||||||||| ||||| ||||||||    
T  6326304 gacacttgtaattacactgaattatgtaattttctcaaatta 6326345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 15884047 - 15884006
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttatttttt 127  Q
    ||||| |||||||||||||||||||||||||||| |||||||    
T  15884047 cgacaccgacacttgtaattacactgaattatgtgatttttt 15884006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 23290000 - 23290049
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagacacgt 71  Q
    |||||||||||||||| ||||||||||||||||  |||| ||||||||||    
T  23290000 atgaagcacggacattgcttggattagacgtgtcccggtgtcagacacgt 23290049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 172
Target Start/End: Complemental strand, 15382538 - 15382444
Alignment:
Q  86 cgacatcgacacttgtaattacactgaat--tatgttattttttcaaattattagttgtgtaggtg------tgtccgtgtcgtgtccggtgtcc 172  Q
    ||||| ||||||||||||||| |||||||  |||| | ||||||||||||||||| ||||| || |      |||||||||||||||||||||||    
T  15382538 cgacaccgacacttgtaattatactgaattatatgattttttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtcc 15382444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 17177029 - 17177081
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||||||||||||||| |||||| | | |||||||||||||||||| |||||    
T  17177029 cgacacttgtaattacaatgaattttttgattttttcaaattattagctgtgt 17177081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 144
Target Start/End: Original strand, 22423802 - 22423870
Alignment:
Q  76 gacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||||||||||||| |||||  | |||||| | |||||||||| ||||| ||||||||||||| ||||    
T  22423802 gacaccgacacgacaccgacatatataattatattgaattatgtgattttctcaaattattagtagtgt 22423870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 98 - 138
Target Start/End: Complemental strand, 27932282 - 27932242
Alignment:
Q  98 ttgtaattacactgaattatgttattttttcaaattattag 138  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  27932282 ttgtaattacactgaattatgtaattttctcaaattattag 27932242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 31264491 - 31264439
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    |||||||| | ||||||||||||||||| ||||| ||||||||||| ||||||    
T  31264491 cgacacttatgattacactgaattatgtcattttctcaaattattacttgtgt 31264439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 6471886 - 6471941
Alignment:
Q  83 acacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    |||||||| | |||| | ||||||||||||||||||| ||||| ||||||||||||    
T  6471886 acacgacacccacacatataattacactgaattatgtgattttctcaaattattag 6471941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 18316952 - 18317003
Alignment:
Q  113 attatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtc 164  Q
    ||||||| ||||||| |||||||||||||||| ||||| ||||| |||||||    
T  18316952 attatgtgattttttaaaattattagttgtgtcggtgtatccgtatcgtgtc 18317003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 22013458 - 22013376
Alignment:
Q  101 taattacactgaattatgttattttttcaaattattagttgtgtagg------tgtgtccgtgtcgtgtccggtgtccttatc 177  Q
    |||||||||| |||||||| |||||| ||||||||||| ||||| ||       |||||||||||||||||||||||| ||||    
T  22013458 taattacactaaattatgtaatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatc 22013376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 28588674 - 28588725
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    ||||| |||||| | ||||||||||||||||||| ||||| |||||||||||    
T  28588674 cgacaccgacacctataattacactgaattatgtgattttctcaaattatta 28588725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 171
Target Start/End: Original strand, 32766930 - 32767026
Alignment:
Q  73 ttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtc 171  Q
    ||||||||||||||||||   |||| | |||||||| |||||| ||  ||||| ||||||||||||  |||| |  ||||||||||||||||| |||||    
T  32766930 ttcgacaccgacacgacacaaacacatataattacattgaattgtgcgattttctcaaattattagcggtgtcg--gtgtccgtgtcgtgtccagtgtc 32767026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 138
Target Start/End: Complemental strand, 36838605 - 36838550
Alignment:
Q  83 acacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    |||||||| |||||| | |||||||||| |||||||| ||||| ||||||||||||    
T  36838605 acacgacaccgacacatataattacactaaattatgtaattttctcaaattattag 36838550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 103 - 137
Target Start/End: Complemental strand, 4344784 - 4344750
Alignment:
Q  103 attacactgaattatgttattttttcaaattatta 137  Q
    ||||||||||||||||| |||||||||||||||||    
T  4344784 attacactgaattatgtcattttttcaaattatta 4344750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 105 - 159
Target Start/End: Complemental strand, 6770583 - 6770529
Alignment:
Q  105 tacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||||||||||||| ||||| | ||||||||||||||||  ||||||| |||||    
T  6770583 tacactgaattatgtgattttcttaaattattagttgtgtcagtgtgtcagtgtc 6770529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 36642745 - 36642835
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| ||||||| ||| |||| |||||||| || ||||||| || ||||| | |||||||||||||||  ||||| || ||||| |||||    
T  36642745 cgtgtccgacaccaacatgacaccgacacttatatttacactaaaatatgtcactttttcaaattattaactgtgtcggcgtgtcagtgtc 36642835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 5467984 - 5468029
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    |||||| | ||||||||||||||||||| ||||| |||||||||||    
T  5467984 cgacacctataattacactgaattatgtgattttatcaaattatta 5468029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 159
Target Start/End: Complemental strand, 6035549 - 6035469
Alignment:
Q  78 caccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||||||||||| |||||  | ||||||||||||||||| ||| ||| ||||||||||||  |||| || ||||| |||||    
T  6035549 caccgacacgacaccgacaaatataattacactgaattatatta-tttctcaaattattagcggtgtcggcgtgtcagtgtc 6035469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 11686014 - 11685918
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccg 166  Q
    ||||| ||||||||| |||||| |||||| | |||||||||| |||||||  | ||| ||||||||||||  |||| ||  |||| ||||||||||||    
T  11686014 cgtgtccgacaccga-acgacaccgacacatataattacactaaattatgcgactttctcaaattattagcggtgtcggcatgtcagtgtcgtgtccg 11685918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 12199997 - 12199948
Alignment:
Q  78 caccgacacgacatcgacacttgtaattacactgaattatgttatttttt 127  Q
    |||| |||||||| ||||||||||||||  |||||||||||| |||||||    
T  12199997 caccaacacgacaccgacacttgtaattgtactgaattatgtgatttttt 12199948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 14873639 - 14873527
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgtta 121  Q
    |||||||||||||| |||| ||||||| |||||  |||| |  |||||||||| |   |||||| |||| |||||| | |||||||||| ||||||||      
T  14873639 atgaagcacggacactcctcggattaggcgtgtcccggtgttggacacgtgtt-gcgtccgacatgacaccgacacatataattacactaaattatgtgc 14873541  T
Q  122 ttttttcaaattat 135  Q
    |||| |||||||||    
T  14873540 ttttctcaaattat 14873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 137
Target Start/End: Original strand, 23015991 - 23016040
Alignment:
Q  88 acatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    |||||||||| | ||||||||||||||||||| ||||| |||||| ||||    
T  23015991 acatcgacacctataattacactgaattatgtgattttctcaaatgatta 23016040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 137
Target Start/End: Complemental strand, 25863257 - 25863212
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    |||||||| ||||||||||||||||| | ||||| |||||||||||    
T  25863257 cgacacttataattacactgaattatatcattttctcaaattatta 25863212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 153
Target Start/End: Original strand, 25888286 - 25888362
Alignment:
Q  79 accgacacgacatcgacacttgtaattacactgaat--tatgttattttttcaaattattagttgtgtaggtgtgtc 153  Q
    ||||||||||||  || |||| ||||||||||||||  |||| | |||||| ||||||||||| |||| ||||||||    
T  25888286 accgacacgacacggagacttataattacactgaattatatgattttttttaaaattattagtagtgttggtgtgtc 25888362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 134
Target Start/End: Complemental strand, 35904689 - 35904656
Alignment:
Q  101 taattacactgaattatgttattttttcaaatta 134  Q
    |||||||||||||||| |||||||||||||||||    
T  35904689 taattacactgaattaagttattttttcaaatta 35904656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 38749557 - 38749614
Alignment:
Q  80 ccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    ||||||| ||| | |||| | |||||||| |||||||||| |||||||||||||||||    
T  38749557 ccgacacaacaccaacacatataattacattgaattatgtcattttttcaaattatta 38749614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 12160005 - 12159953
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||| ||||||||||| | ||||||||  |||||| ||||||||||||||||    
T  12160005 cgacatttgtaattacattaaattatgtgttttttttaaattattagttgtgt 12159953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 172
Target Start/End: Original strand, 12264819 - 12264915
Alignment:
Q  76 gacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtcc 172  Q
    |||||||| | ||||| ||||| | |||||||||||||| |||| ||||| |||||| |||||  |||| ||  |||| |||||||||  |||||||    
T  12264819 gacaccgatatgacattgacacatataattacactgaatcatgtaattttctcaaataattagcggtgttggcatgtcagtgtcgtgtttggtgtcc 12264915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 16304368 - 16304400
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgt 54  Q
    ||||||||||||||||||| |||||||||||||    
T  16304368 atgaagcacggacattcctcggattagacgtgt 16304400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 18592200 - 18592080
Alignment:
Q  23 tgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgtt-----cgacaccgacacgacatcgacacttgtaattacactgaattat 117  Q
    ||||||||||||| || | | ||||| |||||  || | |||||||||||||     |||||||||||||||| || ||| | |||||||| ||||||||    
T  18592200 tgaagcacggacactcatcgaattagccgtgtcccgatgtcagacacgtgttgtgtccgacaccgacacgacaccggcacatataattacattgaattat 18592101  T
Q  118 gttattttttcaaattattag 138  Q
    || ||||| | ||| ||||||    
T  18592100 gtaattttcttaaaatattag 18592080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 103 - 159
Target Start/End: Original strand, 19168838 - 19168894
Alignment:
Q  103 attacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||||||||||| |||| ||||| |||||||| |||  ||||||||||||| |||||    
T  19168838 attacactgaataatgtgattttatcaaattaatagcggtgtaggtgtgtcagtgtc 19168894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 30502388 - 30502440
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||| |||||| | |||||||||||||||| || ||||| ||||||||||||    
T  30502388 cgacaccgacacatataattacactgaattaagtgattttctcaaattattag 30502440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 30542731 - 30542783
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||| |||||| | |||||||||||||||| || ||||| ||||||||||||    
T  30542731 cgacaccgacacatataattacactgaattaagtgattttctcaaattattag 30542783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 4e-30; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 22 - 172
Target Start/End: Complemental strand, 9778622 - 9778475
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgtta 121  Q
    |||||||||||||| |||||||||||| |||||  |||| || |||||||||| |   ||||||||||| ||||||||||||||| |||||||||||| |    
T  9778622 atgaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgtt-gtgtccgacacgacaccgacacttgtaattatactgaattatgtga 9778524  T
Q  122 ttttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtcc 172  Q
    |||||||||||||| || |||||    ||||||||||||||||||||||||    
T  9778523 ttttttcaaattatcagctgtgt--cagtgtccgtgtcgtgtccggtgtcc 9778475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 22 - 144
Target Start/End: Original strand, 11665371 - 11665498
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagacacgtg-----ttcgacaccgacacgacatcgacacttgtaattacactgaatta 116  Q
    ||||||||||||||||||| | |||||| ||||| |||| || ||||||||     ||||||||||||| ||||||||||||| |||||| |||||||||    
T  11665371 atgaagcacggacattcctcgtattagatgtgtttcggtgtcggacacgtgtcgtgttcgacaccgacatgacatcgacacttataattagactgaatta 11665470  T
Q  117 tgttattttttcaaattattagttgtgt 144  Q
    ||| ||||||||||||||||||||||||    
T  11665471 tgtgattttttcaaattattagttgtgt 11665498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 24339718 - 24339634
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtc 153  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||| || |||||    
T  24339718 cgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtc 24339634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 21 - 138
Target Start/End: Original strand, 26033391 - 26033513
Alignment:
Q  21 aatgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgt----tc-gacaccgacacgacatcgacacttgtaattacactgaatt 115  Q
    |||||| |||||||| |||| |||||||  |||| |||||||| |||||||||    || ||||||||||||| | ||||||||||||||||||||||||    
T  26033391 aatgaaacacggacactcctcggattaggtgtgtcgcggtatcggacacgtgtcatgtctgacaccgacacgagaccgacacttgtaattacactgaatt 26033490  T
Q  116 atgttattttttcaaattattag 138  Q
    |||| ||||||||||||||||||    
T  26033491 atgtgattttttcaaattattag 26033513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 138
Target Start/End: Original strand, 5409773 - 5409888
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgtta 121  Q
    |||||||||||||| |||| ||||||| |||||  |||| || ||||||||| ||   ||||||||||| |||||||||||||| ||||||||||||| |    
T  5409773 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgt-cgtgtccgacacgacaccgacacttgtaattgcactgaattatgtga 5409871  T
Q  122 ttttttcaaattattag 138  Q
    |||||||||||||||||    
T  5409872 ttttttcaaattattag 5409888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 86 - 166
Target Start/End: Complemental strand, 8234205 - 8234125
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccg 166  Q
    ||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||    
T  8234205 cgacaccggcacttgtaactacactgaattatgttattttttcaaattattagttgtgtcggtgtgtctgtgtcgggtccg 8234125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 76 - 159
Target Start/End: Original strand, 9408324 - 9408407
Alignment:
Q  76 gacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||||||| |||||| ||||||||||||||||||| |||||||| ||||||||||||||||| |||||| |||||||| |||||    
T  9408324 gacaccgatacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaattgtgtcggtgtgtcagtgtc 9408407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 13770810 - 13770692
Alignment:
Q  25 aagcacggacattccttggattagacgtgttgcggtatcagacacgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattt 124  Q
    ||||||||||| || | ||||||| |||||| |||| || |||||||||| |   ||||||||||| |||||||||||||||||||||||||||| ||||    
T  13770810 aagcacggacactcttcggattaggcgtgttccggtgtcggacacgtgtt-gtgtccgacacgacaacgacacttgtaattacactgaattatgtaattt 13770712  T
Q  125 tttcaaattattagttgtgt 144  Q
    ||| |||||||||| |||||    
T  13770711 ttttaaattattagctgtgt 13770692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 69 - 172
Target Start/End: Complemental strand, 25822731 - 25822628
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggt 168  Q
    ||||| ||| ||||| |||||| |||||||||||||||||||||||| || | ||||||||||||||||||||||| || |||||  |||||| ||||||    
T  25822731 cgtgtccgataccgatacgacaccgacacttgtaattacactgaattgtgattttttttcaaattattagttgtgtcggcgtgtctatgtcgtatccggt 25822632  T
Q  169 gtcc 172  Q
    ||||    
T  25822631 gtcc 25822628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 85 - 151
Target Start/End: Complemental strand, 3991384 - 3991318
Alignment:
Q  85 acgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtg 151  Q
    |||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||    
T  3991384 acgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagttgtgtcggtgtg 3991318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 11272569 - 11272646
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaat--tatgttattttttcaaattattagttgtgt 144  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||  ||||| ||||||||||||||| ||||||||    
T  11272569 cgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatatgtgattttttcaaattatcagttgtgt 11272646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 27945104 - 27945003
Alignment:
Q  82 gacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtagg------tgtgtccgtgtcgtgtccggtgtcctta 175  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||| |||| ||       |||||||||||||||||||||||| ||    
T  27945104 gacacgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgta 27945005  T
Q  176 tc 177  Q
    ||    
T  27945004 tc 27945003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 77 - 172
Target Start/End: Complemental strand, 18039067 - 18038968
Alignment:
Q  77 acaccgacacgacatcgacacttgtaattacactgaattatgtta-ttttttcaa---attattagttgtgtaggtgtgtccgtgtcgtgtccggtgtcc 172  Q
    |||||||||||||| |||||||||||||||||||||||||||| | |||||||||   |||||||||||||| ||  |||| ||||||||||| ||||||    
T  18039067 acaccgacacgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattattagttgtgtcggaatgtcagtgtcgtgtcccgtgtcc 18038968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 69 - 137
Target Start/End: Complemental strand, 7438782 - 7438714
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    |||||| |||||||||| |||| ||||||||||||||||| |||||||||| |||||||||||||||||    
T  7438782 cgtgtttgacaccgacatgacaccgacacttgtaattacattgaattatgtgattttttcaaattatta 7438714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 69 - 172
Target Start/End: Complemental strand, 13300486 - 13300385
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggt 168  Q
    ||||||||||||||||| |||| ||| ||| |||||||||||||||||| | |||||||||||||||||||| |||    || |||||||||||| ||||    
T  13300486 cgtgttcgacaccgacatgacaccgagactggtaattacactgaattatatgattttttcaaattattagttatgt--cagtatccgtgtcgtgttcggt 13300389  T
Q  169 gtcc 172  Q
    ||||    
T  13300388 gtcc 13300385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 32094014 - 32094079
Alignment:
Q  80 ccgacacgacatcgacacttgtaattacactgaattatgtta-ttttttcaaattattagttgtgt 144  Q
    ||||||||||| ||||| |||||||||||||||||||||| | |||||||||||||||||||||||    
T  32094014 ccgacacgacaccgacatttgtaattacactgaattatgtgatttttttcaaattattagttgtgt 32094079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 69 - 137
Target Start/End: Complemental strand, 6028701 - 6028633
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    |||||||||||| ||||||||| ||||| ||||||||||| | ||||||||||| ||||||||||||||    
T  6028701 cgtgttcgacactgacacgacaccgacatttgtaattacattaaattatgttatattttcaaattatta 6028633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 87 - 159
Target Start/End: Original strand, 11061077 - 11061149
Alignment:
Q  87 gacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||| ||||||||||||||| ||| |||||||| |||||||||||||||||| ||||| |||||||| |||||    
T  11061077 gacaccgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtc 11061149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 138
Target Start/End: Original strand, 43027406 - 43027521
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgtta 121  Q
    |||||||||||||| || | ||||||| |||||  |||| || ||||||||| ||   | ||||||||| ||||||||||| |||||||| ||||||| |    
T  43027406 atgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgt-cgtgtctgacacgacaccgacacttgtatttacactgcattatgtga 43027504  T
Q  122 ttttttcaaattattag 138  Q
    |||||||||||||||||    
T  43027505 ttttttcaaattattag 43027521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 25481953 - 25481894
Alignment:
Q  94 acacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtc 153  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||| || |||||    
T  25481953 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtc 25481894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 21560579 - 21560521
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttatttttt 127  Q
    |||||| |||||||| |||||| |||||||||||||||||||||||||||| |||||||    
T  21560579 cgtgtttgacaccgatacgacaccgacacttgtaattacactgaattatgtgatttttt 21560521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 70 - 159
Target Start/End: Original strand, 6630896 - 6630985
Alignment:
Q  70 gtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||| ||||||| ||||||||||||||| | |||||||||||||||| || | ||| ||||||||||||| |||| || ||||| |||||    
T  6630896 gtgtccgacaccaacacgacatcgacacatataattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtcagtgtc 6630985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 81 - 142
Target Start/End: Complemental strand, 7058490 - 7058429
Alignment:
Q  81 cgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgt 142  Q
    |||||||||| | |||||||||||||||||||||||  | ||||||||||||||||||||||    
T  7058490 cgacacgacaccaacacttgtaattacactgaattacatgattttttcaaattattagttgt 7058429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 11831508 - 11831424
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtc 153  Q
    ||||| ||||||||| ||||||   | ||||||||||||||| |||||| | |||||||||||||||||||||||| | ||||||    
T  11831508 cgtgtccgacaccgatacgacacgaatacttgtaattacactaaattatatgattttttcaaattattagttgtgtcgatgtgtc 11831424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 18215182 - 18215238
Alignment:
Q  82 gacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||||||| |||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  18215182 gacacgacaccgacacttgtaactacactgcattatgtgattttttcaaattattag 18215238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 86 - 138
Target Start/End: Complemental strand, 21880211 - 21880159
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||| |||||||||||||||||||||||||||| ||||| ||||||||||||    
T  21880211 cgacaccgacacttgtaattacactgaattatgtaattttctcaaattattag 21880159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 2334377 - 2334256
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagaca-----cgtgttcgacaccgacacgacatcgacacttgtaattacactgaatta 116  Q
    ||||| |||||||| |||| |||||||||||||| | || || ||||     ||||| |||||| ||||||||| ||||||||||||||||||| |||||    
T  2334377 atgaaacacggacactcctcggattagacgtgtttcagtgtcggacatgtgtcgtgtccgacac-gacacgacaccgacacttgtaattacactaaatta 2334279  T
Q  117 tgt--tattttttcaaattatta 137  Q
    |||  | ||||||||||||||||    
T  2334278 tgtgattttttttcaaattatta 2334256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 24105731 - 24105664
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||| ||||| || ||||| |||||    
T  24105731 cgacacttgtaattacactgaatcatgcaattttttcaaattattagctgtgtcggcgtgtcagtgtc 24105664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 92 - 158
Target Start/End: Original strand, 40287363 - 40287428
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgt 158  Q
    ||||||||||||||||||||||| || | |||||||||||||||| ||||||| || ||||||||||    
T  40287363 cgacacttgtaattacactgaat-atatgattttttcaaattattcgttgtgtcggcgtgtccgtgt 40287428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 70 - 124
Target Start/End: Complemental strand, 43243152 - 43243098
Alignment:
Q  70 gtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattt 124  Q
    |||||||||||  |||||||||||||||||||||||||| | |||||||||||||    
T  43243152 gtgttcgacacaaacacgacatcgacacttgtaattacattaaattatgttattt 43243098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 70 - 131
Target Start/End: Complemental strand, 1885648 - 1885587
Alignment:
Q  70 gtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaa 131  Q
    |||| ||||||| |||||||| |||||||||| |||||| |||||||||| |||||||||||    
T  1885648 gtgtccgacaccaacacgacaccgacacttgtgattacattgaattatgtcattttttcaaa 1885587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 81 - 138
Target Start/End: Original strand, 7328686 - 7328743
Alignment:
Q  81 cgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    |||||||||| |||||| | |||||||||| |||||||||||||| ||||||||||||    
T  7328686 cgacacgacaccgacacatataattacactaaattatgttattttctcaaattattag 7328743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 159
Target Start/End: Complemental strand, 21864867 - 21864792
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttatttttt--caaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| ||||||||||||||||||| |||||| | |||||||  ||||||||||| |||||  |||||||||||||    
T  21864867 cgacagcgacacttgtaattacactaaattatatgattttttttcaaattattagctgtgtccgtgtgtccgtgtc 21864792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 138
Target Start/End: Complemental strand, 28155629 - 28155577
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||| |||||||||||||||||| ||||||||| ||||| ||||||||||||    
T  28155629 cgacaccgacacttgtaattacaccgaattatgtaattttctcaaattattag 28155577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 99 - 159
Target Start/End: Original strand, 29763187 - 29763247
Alignment:
Q  99 tgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| |||||| |||||||| ||||||||||||||| |||||||| |||||||| |||||    
T  29763187 tgtaactacacttaattatgtgattttttcaaattataagttgtgttggtgtgtcagtgtc 29763247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 85 - 144
Target Start/End: Complemental strand, 19992061 - 19992002
Alignment:
Q  85 acgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    |||||| |||||||| ||||||||||||| ||||| ||||| |||||||||||| |||||    
T  19992061 acgacaccgacacttataattacactgaaatatgtgattttctcaaattattagctgtgt 19992002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 35862016 - 35861965
Alignment:
Q  93 gacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    |||||||  ||||||| |||||||||| ||||||||||||||||||||||||    
T  35862016 gacacttacaattacattgaattatgtgattttttcaaattattagttgtgt 35861965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 138
Target Start/End: Complemental strand, 8160493 - 8160423
Alignment:
Q  68 acgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||||||||||||||||||| | | |||| | |||||||||| |||||||| ||||| | ||||||||||    
T  8160493 acgtgttcgacaccgacacgataccaacacatataattacactaaattatgtaattttcttaaattattag 8160423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 17307958 - 17307904
Alignment:
Q  80 ccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaatta 134  Q
    ||||||||||| | |||| | ||||||||||||||||||||||||| ||||||||    
T  17307958 ccgacacgacaccaacacatataattacactgaattatgttattttctcaaatta 17307904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 82 - 144
Target Start/End: Original strand, 18013070 - 18013132
Alignment:
Q  82 gacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    |||||||||  ||||| | ||||||||||||||||||| ||||||| ||||||||||| ||||    
T  18013070 gacacgacactgacacatataattacactgaattatgtaatttttttaaattattagtagtgt 18013132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 159
Target Start/End: Complemental strand, 21930696 - 21930615
Alignment:
Q  77 acaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||| ||||||||||||||||||||||||| | |||||||| | ||||||| |||||||||| || || || ||||| |||||    
T  21930696 acactgacacgacatcgacacttgtaattaaaatgaattatctaatttttt-aaattattagctgagtcggcgtgtcagtgtc 21930615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 159
Target Start/End: Complemental strand, 32308188 - 32308106
Alignment:
Q  77 acaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||||||||||||  ||||| |  |||||||||||||||||| ||||| ||||||||||||  |||| || ||||| |||||    
T  32308188 acaccgacacgacactgacacatacaattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtc 32308106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 5835305 - 5835248
Alignment:
Q  87 gacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    |||| |||||| | ||||||||||||||||||||||||| ||||| ||||||| ||||    
T  5835305 gacaccgacacatataattacactgaattatgttattttctcaaactattagtggtgt 5835248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 11890913 - 11890970
Alignment:
Q  80 ccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    ||||||||||| | |||||  ||||||||||||||||| | |||||||||||||||||    
T  11890913 ccgacacgacacctacactcataattacactgaattatatgattttttcaaattatta 11890970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 137
Target Start/End: Complemental strand, 15902898 - 15902830
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    ||||| ||| |||||||| ||| |||||| | |||||||||| |||||||| ||||| |||||||||||    
T  15902898 cgtgtccgataccgacacaacaccgacacatataattacactaaattatgtgattttatcaaattatta 15902830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 138
Target Start/End: Complemental strand, 19213862 - 19213810
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||| ||||||||||| |||||||| ||||||| ||||||| ||||||||||    
T  19213862 cgacaccgacacttgtatttacactgcattatgtgattttttaaaattattag 19213810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 20549850 - 20549778
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgt 158  Q
    ||||| |||||| | |||||||||||||||| || ||||| ||||||||||||  |||| |||||||| ||||    
T  20549850 cgacaccgacacatataattacactgaattacgtgattttctcaaattattagcggtgtcggtgtgtcagtgt 20549778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 30813863 - 30813819
Alignment:
Q  94 acacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    |||| ||||||||||||||||||||| ||||| ||||||||||||    
T  30813863 acacctgtaattacactgaattatgtaattttctcaaattattag 30813819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 153
Target Start/End: Original strand, 7197297 - 7197364
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtc 153  Q
    ||||| ||||||||||||||||| |||||||  | ||||||| |||||||||| ||||| || |||||    
T  7197297 cgacaccgacacttgtaattacattgaattaaatgatttttttaaattattagctgtgtcggcgtgtc 7197364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 137
Target Start/End: Original strand, 8056929 - 8056995
Alignment:
Q  70 gtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    ||||| |||| |||||| |||||||  ||| ||||||||||||||||||| ||||||| |||||||||    
T  8056929 gtgtttgacatcgacacaacatcgatgcttataattacactgaattatgtaatttttt-aaattatta 8056995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 132
Target Start/End: Original strand, 22602705 - 22602756
Alignment:
Q  81 cgacacgacatcgacacttgtaattacactgaattatgttattttttcaaat 132  Q
    |||||||||| |||||| | ||||||||||||||||||| ||||| ||||||    
T  22602705 cgacacgacaccgacacatataattacactgaattatgtgattttctcaaat 22602756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 160
Target Start/End: Complemental strand, 22868086 - 22868027
Alignment:
Q  101 taattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcg 160  Q
    ||||||||||||||||||| ||||| ||| ||||||||| |||| || ||||| ||||||    
T  22868086 taattacactgaattatgtgattttctcatattattagtggtgtcggcgtgtcagtgtcg 22868027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 158
Target Start/End: Complemental strand, 33994270 - 33994199
Alignment:
Q  87 gacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgt 158  Q
    |||| |||||||||||||| ||||||||||||| |  ||||||||||| |||||| || || ||||| ||||    
T  33994270 gacaccgacacttgtaattgcactgaattatgtgaccttttcaaattagtagttgcgtcggcgtgtcagtgt 33994199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 45056925 - 45056980
Alignment:
Q  110 tgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtcc 165  Q
    |||||||||| ||||| ||||||||||||  |||| || |||||||||||||||||    
T  45056925 tgaattatgtgattttctcaaattattagcagtgttggagtgtccgtgtcgtgtcc 45056980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 101 - 166
Target Start/End: Complemental strand, 1656720 - 1656657
Alignment:
Q  101 taattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccg 166  Q
    ||||||||||||||||||| ||||||| |||   |||||||||| |  ||||||||||||||||||    
T  1656720 taattacactgaattatgtgattttttaaaaaatttagttgtgtcg--gtgtccgtgtcgtgtccg 1656657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 110 - 172
Target Start/End: Original strand, 3801229 - 3801291
Alignment:
Q  110 tgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtcc 172  Q
    |||||||||||||||| | ||||||||| |||||| ||||||||| ||| |||| | ||||||    
T  3801229 tgaattatgttattttcttaaattattatttgtgtcggtgtgtccctgttgtgttctgtgtcc 3801291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 2424658 - 2424621
Alignment:
Q  101 taattacactgaattatgttattttttcaaattattag 138  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  2424658 taattacactgaattatgtgattttctcaaattattag 2424621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 139
Target Start/End: Complemental strand, 5954294 - 5954253
Alignment:
Q  98 ttgtaattacactgaattatgttattttttcaaattattagt 139  Q
    |||||||||||||  ||||||| |||||||||||||||||||    
T  5954294 ttgtaattacactagattatgtaattttttcaaattattagt 5954253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 13557750 - 13557817
Alignment:
Q  95 cacttgtaattacactgaattatg---ttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||||||||||||||||||||||   || |||||| |||||||||||| ||| || ||||| |||||    
T  13557750 cacttgtaattacactgaattatgtgattttttttttaaattattagttttgtcggcgtgtcagtgtc 13557817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 16341561 - 16341504
Alignment:
Q  80 ccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    ||||||||||| || ||| | |||||||||| |||||||| ||||| |||||||||||    
T  16341561 ccgacacgacaccggcacatataattacacttaattatgtgattttctcaaattatta 16341504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 137
Target Start/End: Original strand, 26329372 - 26329433
Alignment:
Q  76 gacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    ||||||||||||||  |||||| | ||||||||||||||| |||  |||| |||||||||||    
T  26329372 gacaccgacacgacgccgacacatataattacactgaattgtgtgtttttctcaaattatta 26329433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 29787384 - 29787421
Alignment:
Q  101 taattacactgaattatgttattttttcaaattattag 138  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  29787384 taattacactgaattatgtgattttctcaaattattag 29787421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 137
Target Start/End: Complemental strand, 43250046 - 43250001
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    |||||||| ||||||||||| ||||||| ||||| |||||||||||    
T  43250046 cgacacttataattacactgtattatgtcattttctcaaattatta 43250001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 101 - 137
Target Start/End: Complemental strand, 5938516 - 5938480
Alignment:
Q  101 taattacactgaattatgttattttttcaaattatta 137  Q
    |||||| |||||||||||||||||| |||||||||||    
T  5938516 taattatactgaattatgttattttatcaaattatta 5938480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 86 - 138
Target Start/End: Complemental strand, 26733363 - 26733311
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||| |||||| | |||||| |||||||||||| ||||| ||||||||||||    
T  26733363 cgacaccgacacatttaattagactgaattatgtgattttgtcaaattattag 26733311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 28155671 - 28155639
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgt 54  Q
    ||||||||||||||||||||||||||| |||||    
T  28155671 atgaagcacggacattccttggattaggcgtgt 28155639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 29998974 - 29999038
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgttcgacaccgacac 86  Q
    |||||||| ||||| ||||  |||||||||||||  ||| || ||||||||| ||||||||||||    
T  29998974 atgaagcatggacactcctccgattagacgtgtttaggtgtcggacacgtgtccgacaccgacac 29999038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 48438604 - 48438560
Alignment:
Q  87 gacatcgacacttgtaattacactgaattatgttattttttcaaa 131  Q
    |||| |||||| |||||||||| |||||||||| |||||||||||    
T  48438604 gacaccgacacgtgtaattacattgaattatgtgattttttcaaa 48438560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 1e-27; HSPs: 98)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 24577182 - 24577277
Alignment:
Q  82 gacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtccttatc 177  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||  | ||||||||||||||| | |||||| ||||    
T  24577182 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcagcgtgtccgtgtcgtgttcagtgtccgtatc 24577277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 86 - 172
Target Start/End: Original strand, 22881616 - 22881702
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtcc 172  Q
    ||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||| || ||||| ||||||||||||||||||    
T  22881616 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtcgtgtccggtgtcc 22881702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 22 - 159
Target Start/End: Complemental strand, 47989625 - 47989484
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagaca-----cgtgttcgacaccgacacgacatcgacacttgtaattacactgaatta 116  Q
    |||||||||||||| |||| ||||||| |||||  || | |||||||     ||||| |||||||||||||||| |||||||||||||||||||||||||    
T  47989625 atgaagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaatta 47989526  T
Q  117 tgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||| ||||||| ||||||||| |||||| || ||||| |||||    
T  47989525 tgtgatttttttaaattatta-ttgtgtcggcgtgtcagtgtc 47989484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 144
Target Start/End: Original strand, 1486646 - 1486767
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgtta 121  Q
    ||||||||| |||| |||| ||||||| |||||  |||| || ||||||||| ||   ||||||||||| |||||||| ||||||||||||||||||| |    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgt-cgtgtccgacacgacaccgacacttataattacactgaattatgtga 1486744  T
Q  122 ttttttcaaattattagttgtgt 144  Q
    ||||||||||||||||| |||||    
T  1486745 ttttttcaaattattagctgtgt 1486767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 87 - 172
Target Start/End: Original strand, 18190109 - 18190192
Alignment:
Q  87 gacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtcc 172  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    || |||||||||||||||||||||    
T  18190109 gacatcgacacttgtaattacactgaattatgtaattttttcaaattattaggtgtgt--cagtatccgtgtcgtgtccggtgtcc 18190192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 82 - 159
Target Start/End: Original strand, 1704988 - 1705065
Alignment:
Q  82 gacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||| ||||| |||||||| |||||    
T  1704988 gacacgacaccgacacttgtaattaccctgaattatgtgattttttcaaattattagatgtgtcggtgtgtcggtgtc 1705065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 6612154 - 6612222
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    ||||| ||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  6612154 cgtgtccgacatcgacacgacaccgacacttgtaattacactgaattatgtaattttttcaaattatta 6612222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 81 - 153
Target Start/End: Complemental strand, 113363 - 113291
Alignment:
Q  81 cgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtc 153  Q
    |||||||||| | |||||||||||||||||||||||||| |||||||||||||||||| ||||| || |||||    
T  113363 cgacacgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtc 113291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 22 - 166
Target Start/End: Complemental strand, 17778670 - 17778530
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgtt-cgacaccgacacgacatcgacacttgtaattacactgaattatgtt 120  Q
    |||||||||| ||| | || ||||||| | |||  |||| || |||||||||  |||||||||||||||| ||||||||||||||||||||   |||||     
T  17778670 atgaagcacgaacacttctcggattaggcatgtcccggtgtcggacacgtgtcgcgacaccgacacgacaccgacacttgtaattacactg---tatgtg 17778574  T
Q  121 attttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccg 166  Q
    |||||||||||||||||| |||||   ||| |||||||||||||||    
T  17778573 attttttcaaattattagctgtgt--ctgtctccgtgtcgtgtccg 17778530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 73 - 144
Target Start/End: Complemental strand, 6332742 - 6332672
Alignment:
Q  73 ttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||||||| |||||||| ||| |||||||||||||||||||||||| | ||||||||||||||||||||||    
T  6332742 ttcgacaccaacacgacaccgatacttgtaattacactgaattatgtga-tttttcaaattattagttgtgt 6332672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 22 - 153
Target Start/End: Complemental strand, 9828172 - 9828036
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgt----tc-gacaccgacacgacatcgacacttgtaattacactgaatta 116  Q
    |||||||||||||| |||| |||||||||||||  |||| || |||||||||    || ||||| ||||||||| |||||| |  |||||||||||||||    
T  9828172 atgaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacacgacaccgacacataaaattacactgaatta 9828073  T
Q  117 tgttattttttcaaattattagttgtgtaggtgtgtc 153  Q
    ||| ||||| ||||||||||||| |||| || |||||    
T  9828072 tgtgattttatcaaattattagtggtgtcggcgtgtc 9828036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 21378631 - 21378564
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||| ||||| ||||||||| ||||    
T  21378631 cgacacttgtaattacactgaattatgtaattttttcaatttattagctgtgtcggtgtgtccatgtc 21378564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 86 - 172
Target Start/End: Original strand, 38078661 - 38078748
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtg-tcgtgtccggtgtcc 172  Q
    ||||| ||||||||||||||||| |||||||||| |||||||||||||||||| ||||| |  ||||| ||| |||||||||||||||    
T  38078661 cgacaccgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgttcgtgtccggtgtcc 38078748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 87 - 150
Target Start/End: Original strand, 40258934 - 40258997
Alignment:
Q  87 gacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgt 150  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||    
T  40258934 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattaattgtgtcggtgt 40258997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 48450593 - 48450660
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||| || ||||| |||||    
T  48450593 cgacacttgtaattacactaaattatgttattttttcaaattattagctgtgttggcgtgtcagtgtc 48450660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 143
Target Start/End: Original strand, 32461395 - 32461520
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgtt-----cgacaccgacacgacatcgacacttgtaattacactgaatta 116  Q
    |||||||||||||| | |||||||||| |||||  | || ||||||||||||      |||||||||||| ||| | ||||||||||||||| | |||||    
T  32461395 atgaagcacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacac-acaccaacacttgtaattacattaaatta 32461493  T
Q  117 tgttattttttcaaattattagttgtg 143  Q
    ||| |||||||||||||||||||||||    
T  32461494 tgtgattttttcaaattattagttgtg 32461520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 69 - 138
Target Start/End: Original strand, 5376483 - 5376552
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||| ||||| |||||||||| |||||||| ||||||||||||||||||||||||| | ||||||||||    
T  5376483 cgtgtccgacatcgacacgacaccgacacttttaattacactgaattatgttattttcttaaattattag 5376552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 22515887 - 22515960
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| ||||||||||||||||||| |||||||| |||||||||||||||||| |||||  | |||||||||||    
T  22515887 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtctgcgtgtccgtgtc 22515960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 31672895 - 31672968
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| ||| ||||||||||||||||||||| || |||||||||||||||||| ||||| |||||||| |||||    
T  31672895 cgacaccgagacttgtaattacactgaattaagtgattttttcaaattattagctgtgtcggtgtgtcagtgtc 31672968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 3490396 - 3490475
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtc 171  Q
    ||||||||||||||||||||||| ||||  |||| ||||||||||||  |||| || ||||| |||||||||||||||||    
T  3490396 cgacacttgtaattacactgaataatgtagttttctcaaattattagcagtgtcggcgtgtcagtgtcgtgtccggtgtc 3490475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 86 - 153
Target Start/End: Original strand, 19058856 - 19058923
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtc 153  Q
    ||||| ||||||||||||||||||||||||||||||| |||| |||||||||| ||||| || |||||    
T  19058856 cgacaccgacacttgtaattacactgaattatgttatctttttaaattattagctgtgtcggcgtgtc 19058923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 22 - 166
Target Start/End: Complemental strand, 25362010 - 25361867
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagaca---cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatg 118  Q
    |||||||||||||| || | |||||||  ||||| |||| || ||||   ||||| ||||||||||||||||  ||||| | ||||||||||||||||||    
T  25362010 atgaagcacggacactcttcggattag--gtgttccggtgtcggacatgtcgtgtccgacaccgacacgacactgacacatataattacactgaattatg 25361913  T
Q  119 ttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccg 166  Q
    | ||||| ||||||||| ||| |||| |  | ||||||||||||||||    
T  25361912 tgattttctcaaattatcagtggtgtcg--gcgtccgtgtcgtgtccg 25361867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 28273071 - 28273146
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||| ||||| ||| | |||| |||||||||||||||||||||||||| | |||||||||||| |||||||||||    
T  28273071 cgtgtccgacatcgataggacaccgacacttgtaattacactgaattatatgattttttcaaatgattagttgtgt 28273146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 92 - 147
Target Start/End: Complemental strand, 31015096 - 31015041
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtagg 147  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||    
T  31015096 cgacacttgtaattacactgaattatgtgattttctcaaattattagctgtgtagg 31015041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 70 - 138
Target Start/End: Original strand, 31694694 - 31694764
Alignment:
Q  70 gtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgt--tattttttcaaattattag 138  Q
    |||| |||||||||||||||| ||||||||||||||| ||||||||||||  | |||||||||||||||||    
T  31694694 gtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgattttttttcaaattattag 31694764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 22 - 172
Target Start/End: Complemental strand, 40917877 - 40917718
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgtt-----cgacaccgacacgacatcgacacttgtaattacactgaatta 116  Q
    |||||||||||||| |||| ||||||| |||||  |||| || |||||||||      | |||||||||||||| ||| ||||||||||||||| |||      
T  40917877 atgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgacaccgagacttgtaattacacttaat-- 40917780  T
Q  117 tgttattttttcaaattattagttgtgtaggtgtg------tccgtgtcgtgtccggtgtcc 172  Q
    ||| |||||||||||||||||| ||||| || |||      |||||||||||||||||||||    
T  40917779 tgtgattttttcaaattattagctgtgtcggcgtgtcagtatccgtgtcgtgtccggtgtcc 40917718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 18337388 - 18337338
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattatt 136  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  18337388 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 24334705 - 24334779
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatg-ttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| |||||||||||||||||||||||||||  | ||||||||||| ||||| ||||| ||||||||||||||    
T  24334705 cgacaccgacacttgtaattacactgaattatgcattttttttcaaatgattagctgtgtcggtgtgtccgtgtc 24334779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 42359449 - 42359507
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||| |||||||||||||||||||||||| ||| |||||||||||||||||| |||||    
T  42359449 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagatgtgt 42359507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 44482306 - 44482240
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattat 135  Q
    ||||| |||||||||||||||| |||||| | ||||||||||||||||||| ||||| |||||||||    
T  44482306 cgtgtccgacaccgacacgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 77 - 138
Target Start/End: Original strand, 8010278 - 8010339
Alignment:
Q  77 acaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    |||||||||| |||||||||||| |||||| |||||||||| | ||||||||||||||||||    
T  8010278 acaccgacacaacatcgacacttataattatactgaattatataattttttcaaattattag 8010339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 159
Target Start/End: Complemental strand, 37598890 - 37598818
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| |||||||| ||||||||||||||| ||| |||||||||||||||||||||||| || ||||| |||||    
T  37598890 cgacaccgacacttataattacactgaatt-tgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 37598818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 46348383 - 46348456
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| ||||||||||||||||||| |||||| | |||||||||||||||||| ||||| || ||||| |||||    
T  46348383 cgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtc 46348456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 166
Target Start/End: Complemental strand, 51410084 - 51410003
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgtta-ttttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccg 166  Q
    ||||| |||||||||||||||||||||||||||| | ||||||||||||||||| ||||| ||  ||||||| | |||||||    
T  51410084 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagatgtgtcggcatgtccgttttgtgtccg 51410003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 1815315 - 1815243
Alignment:
Q  87 gacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||| |||||||||||||||||||||||||||| ||||||| |||| |||| |||||| || ||||| |||||    
T  1815315 gacaccgacacttgtaattacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 1815243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 32434723 - 32434779
Alignment:
Q  93 gacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtg 149  Q
    |||||||||||||||| |||||||||| | |||||||||||||||||||||| ||||    
T  32434723 gacacttgtaattacaatgaattatgtgactttttcaaattattagttgtgtcggtg 32434779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 93 - 177
Target Start/End: Original strand, 35702595 - 35702679
Alignment:
Q  93 gacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtccttatc 177  Q
    |||||||||||||||||| |||||| | |  ||||||||||||||| ||||| ||  |||| |||||||||||||||||| ||||    
T  35702595 gacacttgtaattacacttaattatttgaagttttcaaattattagctgtgtcggcatgtcagtgtcgtgtccggtgtccgtatc 35702679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 10233297 - 10233230
Alignment:
Q  101 taattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggt 168  Q
    ||||||||||||||||||| ||||| |||| |||||||| |||| |||||||||  ||||||||||||    
T  10233297 taattacactgaattatgtgattttctcaatttattagtggtgttggtgtgtccaagtcgtgtccggt 10233230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 6427540 - 6427440
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttatttttt---caaattattagttgtgtaggtgtgtccgtgtcgtgtcc 165  Q
    ||||| |||| || ||||||||  |||||||||| ||||| |||||||||| |||||||   ||||||||||||||||| ||  |||| |||||||||||    
T  6427540 cgtgtccgacgcctacacgacactgacacttgtagttacattgaattatgtgatttttttttcaaattattagttgtgtcggcatgtcagtgtcgtgtcc 6427441  T
Q  166 g 166  Q
    |    
T  6427440 g 6427440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 9629883 - 9629973
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| ||||| |||||||||| |||||||| |||| |||||||||||| | ||||| ||||||||||||  |||| | |||||| |||||    
T  9629883 cgtgtccgacatcgacacgacaccgacacttataatcacactgaattatatgattttatcaaattattagcggtgtcgatgtgtcggtgtc 9629973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 14359529 - 14359594
Alignment:
Q  93 gacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||||||||||||||||| |||||||| | |||||||||||||||| ||||| || |||||||||||    
T  14359529 gacacttgtaattacactaaattatgtga-tttttcaaattattagctgtgtcggcgtgtccgtgtc 14359594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 91 - 177
Target Start/End: Complemental strand, 30359442 - 30359357
Alignment:
Q  91 tcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtccttatc 177  Q
    |||||||||| | ||||||| |||||||| ||||||||||||||| |||||||  |||||||| ||||| ||||| |||||| ||||    
T  30359442 tcgacacttgcagttacactaaattatgtgattttttcaaattatcagttgtgccggtgtgtcagtgtc-tgtcccgtgtccgtatc 30359357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 81 - 143
Target Start/End: Complemental strand, 5944347 - 5944283
Alignment:
Q  81 cgacacgacatcgacacttgtaattacactgaattatgt--tattttttcaaattattagttgtg 143  Q
    |||||||||| |||||||| |||||||||||||||||||  | ||||||||||||||||| ||||    
T  5944347 cgacacgacaccgacacttataattacactgaattatgtgattttttttcaaattattagctgtg 5944283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 22 - 138
Target Start/End: Original strand, 34712325 - 34712435
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgtta 121  Q
    |||||||||||||| |||||| |||||||||||  | || |  |||||||||      |||||||||||  ||||| | |||||||||| ||||||||||    
T  34712325 atgaagcacggacactccttgaattagacgtgtcccagtgtaggacacgtgt------ccgacacgacactgacacatataattacactaaattatgtta 34712418  T
Q  122 ttttttcaaattattag 138  Q
    |||| ||||||||||||    
T  34712419 ttttctcaaattattag 34712435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 159
Target Start/End: Original strand, 40285646 - 40285727
Alignment:
Q  78 caccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||||||||||||||||||| | | | ||||||||||||||  ||||| ||||||||||||  |||| |||||||| |||||    
T  40285646 caccgacacgacatcgacacatatgactacactgaattatgcgattttctcaaattattagcggtgttggtgtgtcagtgtc 40285727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 153
Target Start/End: Complemental strand, 17754379 - 17754303
Alignment:
Q  77 acaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtc 153  Q
    |||||||||| |||  ||||| | || |||||||||||||||| ||||||||||||||||||  |||| ||||||||    
T  17754379 acaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgtc 17754303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 34298480 - 34298428
Alignment:
Q  101 taattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtc 153  Q
    ||||||||||||||||||| ||||| ||||||||||||| |||| ||||||||    
T  34298480 taattacactgaattatgtgattttctcaaattattagtggtgtcggtgtgtc 34298428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 41877470 - 41877522
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||| ||||||||||||||||||| |||||||| ||||| ||||||||||||    
T  41877470 cgacaccgacacttgtaattacactaaattatgtaattttctcaaattattag 41877522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 67 - 126
Target Start/End: Original strand, 15449213 - 15449272
Alignment:
Q  67 cacgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttt 126  Q
    ||||||| ||||||||| ||||||  |||||||||||||||||| |||||||| ||||||    
T  15449213 cacgtgtccgacaccgatacgacacagacacttgtaattacactaaattatgtgattttt 15449272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 76 - 159
Target Start/End: Original strand, 18556446 - 18556529
Alignment:
Q  76 gacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||||| ||||||| | | ||||||||||||| | |||||||| || ||||||||||||||| ||||| || ||||| |||||    
T  18556446 gacaccgtcacgacaccaatacttgtaattacattaaattatgtgatattttcaaattattagctgtgtcggcgtgtcagtgtc 18556529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 70 - 137
Target Start/End: Original strand, 24176351 - 24176418
Alignment:
Q  70 gtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    |||| ||||||||||| ||  ||||||| | |||||||||||||| |||||||||| |||||||||||    
T  24176351 gtgtccgacaccgacatgatctcgacacctataattacactgaatgatgttattttctcaaattatta 24176418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 101 - 159
Target Start/End: Original strand, 398780 - 398838
Alignment:
Q  101 taattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||||||||||||||||| ||||||||||||||||||  |||| || ||||| |||||    
T  398780 taattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtc 398838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 158
Target Start/End: Original strand, 10572579 - 10572661
Alignment:
Q  76 gacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgt 158  Q
    |||||| |||| ||| |||||| | ||||||||| ||||||||| ||||| ||||||||||||| |||| || ||||| ||||    
T  10572579 gacaccaacacaacaccgacacatttaattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgt 10572661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 12443476 - 12443530
Alignment:
Q  102 aattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgt 156  Q
    |||||||||||||||||| ||||| |||||||||||| ||||| || ||||||||    
T  12443476 aattacactgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgt 12443530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 30173745 - 30173803
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttatttttt 127  Q
    ||||| ||| || ||||||||| ||||||||||||||||||||| |||||| |||||||    
T  30173745 cgtgtccgatacggacacgacaccgacacttgtaattacactgagttatgtaatttttt 30173803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 82 - 139
Target Start/End: Original strand, 7918207 - 7918264
Alignment:
Q  82 gacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagt 139  Q
    |||||||||  ||||| | ||||||||||||||||||| ||||| |||||||||||||    
T  7918207 gacacgacactgacacatataattacactgaattatgtgattttctcaaattattagt 7918264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 9449024 - 9449080
Alignment:
Q  102 aattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgt 158  Q
    ||||| |||||||||||| ||||||||||||||||| | |||| |||||||| ||||    
T  9449024 aattatactgaattatgtgattttttcaaattattaatggtgttggtgtgtctgtgt 9449080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 17831548 - 17831616
Alignment:
Q  103 attacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtc 171  Q
    |||||||||||| |||| ||||| ||||||||||||  |||| || ||||| ||||||| |||||||||    
T  17831548 attacactgaataatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtcgtatccggtgtc 17831616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 36878519 - 36878447
Alignment:
Q  87 gacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||| |||||| | ||||||||||||||||||| ||||| ||||||||||||  |||| || ||||| |||||    
T  36878519 gacaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtc 36878447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 13011223 - 13011274
Alignment:
Q  94 acacttgtaattacactgaattatgtta-ttttttcaaattattagttgtgt 144  Q
    ||||||||||||||||| |||||||| | ||||||||||||||||| |||||    
T  13011223 acacttgtaattacacttaattatgtgatttttttcaaattattagctgtgt 13011274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 18471353 - 18471299
Alignment:
Q  92 cgacacttgtaattacactgaattatgt--tattttttcaaattattagttgtgt 144  Q
    ||||||||||||||| ||||||||||||  | ||||||||||||||||| |||||    
T  18471353 cgacacttgtaattatactgaattatgtgattttttttcaaattattagctgtgt 18471299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 144
Target Start/End: Complemental strand, 23738722 - 23738679
Alignment:
Q  101 taattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||| ||||||||||||| |||||||||||||||||| |||||    
T  23738722 taattgcactgaattatgtgattttttcaaattattagctgtgt 23738679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 138
Target Start/End: Original strand, 26238129 - 26238164
Alignment:
Q  103 attacactgaattatgttattttttcaaattattag 138  Q
    ||||||||||||||||||||||| ||||||||||||    
T  26238129 attacactgaattatgttattttctcaaattattag 26238164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 29144365 - 29144416
Alignment:
Q  93 gacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||||||||||||||||| ||||| |  ||||||||||||||||| |||||    
T  29144365 gacacttgtaattacactgcattatctatttttttcaaattattagctgtgt 29144416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 34371783 - 34371728
Alignment:
Q  75 cgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaa 130  Q
    ||||||| |||||||| |||||| | ||||||||||||||||||| ||||| ||||    
T  34371783 cgacaccaacacgacaccgacacatataattacactgaattatgtgattttctcaa 34371728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 127
Target Start/End: Original strand, 35919270 - 35919317
Alignment:
Q  80 ccgacacgacatcgacacttgtaattacactgaattatgttatttttt 127  Q
    |||||||||||  ||||||| ||||||||||||||||||| |||||||    
T  35919270 ccgacacgacacggacacttataattacactgaattatgtgatttttt 35919317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 142
Target Start/End: Original strand, 46940803 - 46940850
Alignment:
Q  96 acttgtaattacactgaattatgtta-ttttttcaaattattagttgt 142  Q
    ||||||||||||||| |||||||||| ||||||||||| |||||||||    
T  46940803 acttgtaattacacttaattatgttatttttttcaaataattagttgt 46940850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 92 - 150
Target Start/End: Original strand, 1864886 - 1864944
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgt 150  Q
    |||||| | ||||||||||||||||||| ||||| |||||||||||  ||||| |||||    
T  1864886 cgacacatataattacactgaattatgtgattttctcaaattattaactgtgtcggtgt 1864944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 8117083 - 8117024
Alignment:
Q  96 acttgtaattacactgaattatg----ttattttttcaaattattagttgtgtaggtgtg 151  Q
    |||||||||||||||||||||||    || ||| ||||||||||||| ||||||||||||    
T  8117083 acttgtaattacactgaattatgtgttttttttcttcaaattattagctgtgtaggtgtg 8117024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 10474997 - 10475063
Alignment:
Q  106 acactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtcc 172  Q
    |||||||||||||| ||||| |||| |||||||  |||| || |||||  |||||||||||||||||    
T  10474997 acactgaattatgtgattttctcaagttattagcggtgtcggcgtgtcaatgtcgtgtccggtgtcc 10475063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 105 - 143
Target Start/End: Original strand, 21366039 - 21366077
Alignment:
Q  105 tacactgaattatgttattttttcaaattattagttgtg 143  Q
    ||||||||||||||||||||||| |||||||||| ||||    
T  21366039 tacactgaattatgttattttttaaaattattagctgtg 21366077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 86 - 163
Target Start/End: Complemental strand, 21621014 - 21620932
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttatttt-----ttcaaattattagttgtgtaggtgtgtccgtgtcgtgt 163  Q
    ||||| |||| ||||||| ||||||||||||||| |||||     |||||||| |||||||||| || | |||||||||||||    
T  21621014 cgacaccgacgcttgtaaatacactgaattatgtgattttttttcttcaaatttttagttgtgttggcgagtccgtgtcgtgt 21620932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 37055866 - 37055908
Alignment:
Q  96 acttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||    
T  37055866 acttgtaattacactaaattatgtaattttctcaaattattag 37055908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 92 - 150
Target Start/End: Original strand, 39101188 - 39101246
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgt 150  Q
    |||||| | |||||||||| |||||||||||||| |||||||||||  ||||| |||||    
T  39101188 cgacacctataattacacttaattatgttattttctcaaattattatatgtgtcggtgt 39101246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 158
Target Start/End: Complemental strand, 1262928 - 1262871
Alignment:
Q  101 taattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgt 158  Q
    |||||| | |||||||||| ||||| |||||||||||| ||||| || ||||||||||    
T  1262928 taattatattgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtgt 1262871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 119
Target Start/End: Complemental strand, 2218302 - 2218265
Alignment:
Q  82 gacacgacatcgacacttgtaattacactgaattatgt 119  Q
    ||||||||| ||||||||||||||||||| ||||||||    
T  2218302 gacacgacaccgacacttgtaattacactaaattatgt 2218265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 85 - 142
Target Start/End: Complemental strand, 2283726 - 2283669
Alignment:
Q  85 acgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgt 142  Q
    |||||| | |||||| |||||||| ||||| |||| ||||||||||||||| ||||||    
T  2283726 acgacaccaacacttataattacattgaatcatgtgattttttcaaattataagttgt 2283669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 5898281 - 5898318
Alignment:
Q  101 taattacactgaattatgttattttttcaaattattag 138  Q
    ||||||||||||||||||| ||||||||| ||||||||    
T  5898281 taattacactgaattatgtgattttttcagattattag 5898318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 138
Target Start/End: Original strand, 5927347 - 5927392
Alignment:
Q  93 gacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    |||||||||||||||| | |||||| | ||||||||||||||||||    
T  5927347 gacacttgtaattacattaaattatatgattttttcaaattattag 5927392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 159
Target Start/End: Complemental strand, 6427413 - 6427336
Alignment:
Q  82 gacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||||||| | |||| | |||||||| |||||||||| ||||| ||||||||||||  |||| || ||||| |||||    
T  6427413 gacacgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtc 6427336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 159
Target Start/End: Complemental strand, 9103698 - 9103626
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| ||||||||||| ||| ||| |||||||| |||||||||||||||||  ||||| || ||||| |||||    
T  9103698 cgacaccgacacttgta-ttaaactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtc 9103626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 16927200 - 16927237
Alignment:
Q  101 taattacactgaattatgttattttttcaaattattag 138  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  16927200 taattacactgaattatatgattttttcaaattattag 16927237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 138
Target Start/End: Complemental strand, 21038159 - 21038090
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||| ||||||||||||||||  ||| | | | ||||||||||||||||| ||||| | ||||||||||    
T  21038159 cgtgtccgacaccgacacgacactgacgcatatgattacactgaattatgtaattttcttaaattattag 21038090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 22794084 - 22794129
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    |||||| | ||||||||||| ||||||| |||||||||||||||||    
T  22794084 cgacacctataattacactgtattatgtcattttttcaaattatta 22794129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 138
Target Start/End: Original strand, 27471557 - 27471618
Alignment:
Q  77 acaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||||| | |||| | |||| |||||||||||||||||||||  |||| ||||||||||||    
T  27471557 acaccgatatgacaccaacacatgtaattacactgaattatgtgcttttctcaaattattag 27471618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 152
Target Start/End: Complemental strand, 38503386 - 38503313
Alignment:
Q  79 accgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgt 152  Q
    ||||||| |||| |||||| | ||||||||||||| ||| | ||||| ||||||||||||  |||| |||||||    
T  38503386 accgacaggacaccgacacatataattacactgaaatatatgattttctcaaattattagcggtgtcggtgtgt 38503313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 40181915 - 40181878
Alignment:
Q  101 taattacactgaattatgttattttttcaaattattag 138  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  40181915 taattacactgaattatgtgattttctcaaattattag 40181878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 101 - 144
Target Start/End: Original strand, 9033022 - 9033066
Alignment:
Q  101 taattacactgaattatgtta-ttttttcaaattattagttgtgt 144  Q
    ||||||||||||||||||| | |||||||||||||||||| ||||    
T  9033022 taattacactgaattatgtgatttttttcaaattattagtggtgt 9033066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 11605943 - 11605987
Alignment:
Q  94 acacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    |||| ||||||| ||||||||||| | ||||||||||||||||||    
T  11605943 acacatgtaatttcactgaattatatgattttttcaaattattag 11605987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 93 - 137
Target Start/End: Complemental strand, 15323215 - 15323171
Alignment:
Q  93 gacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    |||||||  ||||||||| |||||||| |||||||||||||||||    
T  15323215 gacacttacaattacactaaattatgtgattttttcaaattatta 15323171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 137
Target Start/End: Original strand, 16164306 - 16164366
Alignment:
Q  77 acaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    ||||| ||||||||  ||||| | |||||||| | |||||||| |||||||||||||||||    
T  16164306 acaccaacacgacaatgacacatataattacattaaattatgtgattttttcaaattatta 16164366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 107 - 159
Target Start/End: Complemental strand, 16812581 - 16812529
Alignment:
Q  107 cactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||||||||||| ||||| ||||||||||| | |||| |||||||| |||||    
T  16812581 cactgaattatgtgattttgtcaaattattattggtgtcggtgtgtcagtgtc 16812529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 20157346 - 20157402
Alignment:
Q  82 gacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||||||| |||||| | | ||||||||||||||||| ||||| ||| ||||||||    
T  20157346 gacacgacaccgacacatatgattacactgaattatgtgattttctcacattattag 20157402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 23622012 - 23621964
Alignment:
Q  104 ttacactgaattatgttattttttcaaattattagttgtgtaggtgtgt 152  Q
    |||||||||| ||| | |||||||||||||||||| ||||| |||||||    
T  23622012 ttacactgaagtatataattttttcaaattattagctgtgtcggtgtgt 23621964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 23653040 - 23652992
Alignment:
Q  104 ttacactgaattatgttattttttcaaattattagttgtgtaggtgtgt 152  Q
    |||||||||| ||||| |||||||||||||||||| | ||| |||||||    
T  23653040 ttacactgaagtatgtgattttttcaaattattagctttgtcggtgtgt 23652992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 71 - 131
Target Start/End: Original strand, 24462255 - 24462315
Alignment:
Q  71 tgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaa 131  Q
    |||| |||||| ||||||||  || |||||| |||||| |||||||||| |||||||||||    
T  24462255 tgttagacaccaacacgacactgaaacttgtgattacattgaattatgtcattttttcaaa 24462315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 101 - 137
Target Start/End: Original strand, 26837757 - 26837793
Alignment:
Q  101 taattacactgaattatgttattttttcaaattatta 137  Q
    |||||||||| |||||| |||||||||||||||||||    
T  26837757 taattacactaaattatattattttttcaaattatta 26837793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 119
Target Start/End: Original strand, 48547974 - 48548018
Alignment:
Q  75 cgacaccgacacgacatcgacacttgtaattacactgaattatgt 119  Q
    |||||||||||||||| | | ||||||||||||| ||||||||||    
T  48547974 cgacaccgacacgacaccaatacttgtaattacattgaattatgt 48548018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 4e-27; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 22 - 159
Target Start/End: Complemental strand, 22652104 - 22651962
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagacac-----gtgttcgacaccgacacgacatcgacacttgtaattacactgaatta 116  Q
    |||||||||||||| |||| |||||||||||||  |||| || |||||     |||| |||||||||||||||| ||||||||||||||| | |||||||    
T  22652104 atgaagcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacacgacaccgacacttgtaattatattgaatta 22652005  T
Q  117 tgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||| |||||||||||||||||| ||||| || ||||| |||||    
T  22652004 tgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 22651962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 94 - 177
Target Start/End: Complemental strand, 22596045 - 22595962
Alignment:
Q  94 acacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtccttatc 177  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||| || ||||| |||| ||||||||||||| ||||    
T  22596045 acacttgtaattacactgaattatgttatttttttaaattattagctgtgtcggcgtgtcagtgttgtgtccggtgtccgtatc 22595962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 15816112 - 15816202
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| ||||||| |||||||| |||||||| |||||||||| |||||||| |||||||||||||||||||||||| || ||||| |||||    
T  15816112 cgtgtccgacaccaacacgacaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 15816202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 76 - 144
Target Start/End: Complemental strand, 25566910 - 25566842
Alignment:
Q  76 gacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    |||||| |||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  25566910 gacaccaacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgt 25566842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 2572039 - 2572114
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||| |||||| ||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||| |||||    
T  2572039 cgtgtccgacacagacacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtgt 2572114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 22 - 144
Target Start/End: Original strand, 29447041 - 29447168
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagacac-----gtgttcgacaccgacacgacatcgacacttgtaattacactgaatta 116  Q
    |||||||||||||| |||| ||||||| |||||   ||| ||||||||     |||| ||||||||||| |||| ||||||||||| ||||| |||||||    
T  29447041 atgaagcacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtccgacaccgacatgacaccgacacttgtagttacattgaatta 29447140  T
Q  117 tgttattttttcaaattattagttgtgt 144  Q
    ||| ||||| ||||||||||||||||||    
T  29447141 tgtgattttctcaaattattagttgtgt 29447168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 29510287 - 29510377
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| |||||||||||| ||| ||||||||||||||| |||||||| ||| |||||||||||||||||| ||||| || ||||| |||||    
T  29510287 cgtgtccgacaccgacactacaccgacacttgtaattatactgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 29510377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 74 - 159
Target Start/End: Original strand, 13436952 - 13437037
Alignment:
Q  74 tcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||||||||||||||| |||||||||| |||||  |||||||||| |||||||||||||||||| ||||| || ||||| |||||    
T  13436952 tcgacaccgacacgacaccgacacttgttattaccatgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 13437037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 86 - 140
Target Start/End: Complemental strand, 4948711 - 4948657
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagtt 140  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4948711 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagtt 4948657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 69 - 138
Target Start/End: Complemental strand, 28745574 - 28745505
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||| |||||||||||||||||||||| ||||| ||||| |||||||||| | ||||||||||||||||    
T  28745574 cgtgtccgacaccgacacgacatcgacatttgtagttacattgaattatgtgaatttttcaaattattag 28745505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 36450762 - 36450827
Alignment:
Q  94 acacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||| || ||||| |||||    
T  36450762 acacttgtaattacactgaattctgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 36450827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 8343032 - 8342947
Alignment:
Q  85 acgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtcc 172  Q
    |||||| ||||||||||||||||||| |||||||| |||||||||||||||||| | ||| |  ||||| |||||||||||| |||||    
T  8343032 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcg--gtgtcagtgtcgtgtccgatgtcc 8342947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 93 - 159
Target Start/End: Complemental strand, 8343368 - 8343302
Alignment:
Q  93 gacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||||||||||||||||| |||||||| |||||||||||||||||| | ||| |||||||| |||||    
T  8343368 gacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcggtgtgtcggtgtc 8343302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 30077394 - 30077460
Alignment:
Q  93 gacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||||||||||||||||||||||||| || ||||||||||||||| || || || |||||||||||    
T  30077394 gacacttgtaattacactgaattatgtgatgttttcaaattattagctgcgttggcgtgtccgtgtc 30077460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 18407772 - 18407700
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtc 164  Q
    |||||||||||||||||||||||||||| |||||||  ||||||||| ||||| ||  |||| ||||||||||    
T  18407772 cgacacttgtaattacactgaattatgtgatttttttgaattattagctgtgtcggcatgtctgtgtcgtgtc 18407700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 69 - 178
Target Start/End: Complemental strand, 21465488 - 21465387
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggt 168  Q
    ||||| |||||| ||||||||| | |||||||||||||||  ||||||| | |||||||||||||||        ||| |||||||||||||||||||||    
T  21465488 cgtgtccgacactgacacgacaccaacacttgtaattacatcgaattatatgattttttcaaattat--------tagctgtgtccgtgtcgtgtccggt 21465397  T
Q  169 gtccttatct 178  Q
    |||| |||||    
T  21465396 gtccgtatct 21465387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 137
Target Start/End: Complemental strand, 20873128 - 20873077
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    ||||| ||||||||||||||||||| |||||||| |||||||||||||||||    
T  20873128 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 20873077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 76 - 159
Target Start/End: Original strand, 24362192 - 24362275
Alignment:
Q  76 gacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||||||||||||||| ||||| | ||||||||||||||||||| ||| | ||||||||||||  |||| || ||||| |||||    
T  24362192 gacaccgacacgacattgacacatataattacactgaattatgtgattctctcaaattattagcggtgtcggcgtgtcggtgtc 24362275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 153
Target Start/End: Complemental strand, 24613579 - 24613513
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtc 153  Q
    ||||| ||||||||||||||||||| |||||||| | |||||||||||||||| ||||| ||||||||    
T  24613579 cgacaccgacacttgtaattacacttaattatgtga-tttttcaaattattagctgtgtcggtgtgtc 24613513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 13844596 - 13844674
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtc 164  Q
    ||||| |||||| | |||||||||| |||||||| ||||| ||||||||||||  |||| || ||||||||||||||||    
T  13844596 cgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgtccgtgtcgtgtc 13844674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 171
Target Start/End: Original strand, 4786338 - 4786423
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtc 171  Q
    ||||| |||||| | ||||||||||||||||||| ||||| | ||||||||| | |||| || ||||| ||||||||| |||||||    
T  4786338 cgacaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtcagtgtcgtgttcggtgtc 4786423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 159
Target Start/End: Complemental strand, 5813651 - 5813578
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| ||||||||||| ||||||| || ||||| | |||||||||||||||| ||||| || |||||||||||    
T  5813651 cgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 5813578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 76 - 137
Target Start/End: Original strand, 11927076 - 11927137
Alignment:
Q  76 gacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    |||||| |||||||| |||||| | ||||||||||||||||||| ||||| |||||||||||    
T  11927076 gacaccaacacgacaccgacacatataattacactgaattatgtgattttatcaaattatta 11927137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 18170482 - 18170555
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| ||||| ||||||||||| |||||||||| ||||||||||||| ||| |||||| || ||||| |||||    
T  18170482 cgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtc 18170555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 18634050 - 18634123
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| ||||| ||||||||||| |||||||||| ||||||||||||| ||| |||||| || ||||| |||||    
T  18634050 cgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtc 18634123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 82 - 159
Target Start/End: Original strand, 30271287 - 30271364
Alignment:
Q  82 gacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||||||||  | ||||||||||||||||| ||||||| |||||||||||| ||||| ||||| || ||||| |||||    
T  30271287 gacacgacactggcacttgtaattacactgcattatgtgattttttcaaatgattagctgtgtcggcgtgtcagtgtc 30271364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 41831946 - 41831991
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||    
T  41831946 cgacacttgtagttacactgaattatgtgattttttcaaattatta 41831991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 27067283 - 27067356
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||| ||||||||||||||||  ||||||||||||||||  ||||||||| ||||| |||||| |||||| ||||    
T  27067283 cgtgtccgacaccgacacgacactgacacttgtaattaca--gaattatgtaattttctcaaatcattagtggtgt 27067356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 138
Target Start/End: Complemental strand, 34897144 - 34897092
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    |||||||||||| | ||||||||||||||||||| ||||| ||||||||||||    
T  34897144 cgacatcgacacatataattacactgaattatgtgattttctcaaattattag 34897092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 40332244 - 40332200
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattatt 136  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||    
T  40332244 cgacacttgtaattacactgaattatgtgattttctcaaattatt 40332200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 17468503 - 17468566
Alignment:
Q  81 cgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    |||||||||| | |||||||||||||||| | ||||||| |||||| ||||||||| |||||||    
T  17468503 cgacacgacaccaacacttgtaattacaccgcattatgtgatttttacaaattatttgttgtgt 17468566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 22197749 - 22197800
Alignment:
Q  93 gacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    |||||||||||||||||| |||||||| | |||||||||||||||| |||||    
T  22197749 gacacttgtaattacactaaattatgtgaatttttcaaattattagctgtgt 22197800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 86 - 137
Target Start/End: Complemental strand, 24669492 - 24669441
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    ||||| |||||||||||||||||||||||||||| ||||  |||||||||||    
T  24669492 cgacaccgacacttgtaattacactgaattatgtaatttcctcaaattatta 24669441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 25192353 - 25192420
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||||||| |||||| |||||||||||| | |||||||||||||||| ||||| || ||||| |||||    
T  25192353 cgacacttataattatactgaattatgtcactttttcaaattattagctgtgtcggcgtgtcagtgtc 25192420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 4298887 - 4298937
Alignment:
Q  87 gacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    |||| ||||||||||||||||| | |||||||| |||||||||||||||||    
T  4298887 gacaccgacacttgtaattacattaaattatgtgattttttcaaattatta 4298937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 101 - 151
Target Start/End: Complemental strand, 4611578 - 4611528
Alignment:
Q  101 taattacactgaattatgttattttttcaaattattagttgtgtaggtgtg 151  Q
    ||||||||||||||||||||||||| ||||||||||||  |||| ||||||    
T  4611578 taattacactgaattatgttattttctcaaattattagcggtgtcggtgtg 4611528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 159
Target Start/End: Original strand, 4673356 - 4673498
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagaca-----cgtgttcgacaccgacacgacatcgacacttgtaattacactgaatta 116  Q
    ||||||||| |||| |||||||||||| |||||| |||| || || |     ||||| ||||| | ||| ||||  || ||||||||||||||||||||     
T  4673356 atgaagcacagacactccttggattaggcgtgttccggtgtcggatatgcgtcgtgtccgacatcaacaagacactgatacttgtaattacactgaattt 4673455  T
Q  117 tgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    | | |||||||||||||||||  ||||| || ||||| |||||    
T  4673456 tatgattttttcaaattattatctgtgtcggcgtgtcagtgtc 4673498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 7442896 - 7442852
Alignment:
Q  94 acacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    |||||||||||||||||||||||||| ||||| | ||||||||||    
T  7442896 acacttgtaattacactgaattatgtaattttatgaaattattag 7442852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 159
Target Start/End: Complemental strand, 22204693 - 22204625
Alignment:
Q  93 gacacttgtaattacactgaattatgt-tat-tttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||||||||||||||||||||||| | ||| ||||| |||||||||||||||| || ||||| |||||    
T  22204693 gacacttgtaattacactgaattatatatatattttttaaattattagttgtgtcggcgtgtcagtgtc 22204625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 144
Target Start/End: Original strand, 24727737 - 24727812
Alignment:
Q  71 tgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttatttt--ttcaaattattagttgtgt 144  Q
    ||||||| ||||||| ||||   ||||||| |||||||||| ||||||| |||||  |||||||||||||||||||    
T  24727737 tgttcgataccgacatgacactaacacttgaaattacactgcattatgtaattttttttcaaattattagttgtgt 24727812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 159
Target Start/End: Complemental strand, 24858076 - 24857995
Alignment:
Q  80 ccgacacgacatcgacacttgtaattacactgaattatg---ttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||||||||| ||||||||||| |||||||||||||||   || ||||||||||||||||  ||||| || |||||| ||||    
T  24858076 ccgacacgacaacgacacttgta-ttacactgaattatgtgatttttttttcaaattattaactgtgtcggcgtgtccatgtc 24857995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 144
Target Start/End: Complemental strand, 7658507 - 7658464
Alignment:
Q  101 taattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||||||||||||||||| ||||| ||||||||||||| ||||    
T  7658507 taattacactgaattatgtaattttctcaaattattagtggtgt 7658464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 160
Target Start/End: Complemental strand, 14134743 - 14134684
Alignment:
Q  101 taattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcg 160  Q
    ||||||||||||||||||| ||||| |||||||||||||  ||| |  ||||||||||||    
T  14134743 taattacactgaattatgtgattttctcaaattattagtattgtcgacgtgtccgtgtcg 14134684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 117
Target Start/End: Original strand, 15023257 - 15023288
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattat 117  Q
    ||||||||||||||||||||||||||||||||    
T  15023257 cgacatcgacacttgtaattacactgaattat 15023288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 16867202 - 16867259
Alignment:
Q  83 acacgacatcgacacttgtaattacactgaattatg---ttattttttcaaattatta 137  Q
    |||||||| |||||||| |||||||||| |||||||   |||||||||||||||||||    
T  16867202 acacgacaccgacacttataattacactaaattatgttattattttttcaaattatta 16867259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 138
Target Start/End: Original strand, 20679396 - 20679447
Alignment:
Q  87 gacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    |||| |||||||| ||||||||||||| ||||| ||||| ||||||||||||    
T  20679396 gacaccgacacttataattacactgaactatgtgattttctcaaattattag 20679447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 31514924 - 31514873
Alignment:
Q  94 acacttgtaattacactgaattatgttatttttt-caaattattagttgtgt 144  Q
    ||||||||| |||| ||||||||||| ||||||| |||||||||||||||||    
T  31514924 acacttgtagttacgctgaattatgtgatttttttcaaattattagttgtgt 31514873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 11944727 - 11944673
Alignment:
Q  83 acacgacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    |||||||| |||||| | |||||||||||| |||||| ||||| |||||||||||    
T  11944727 acacgacaccgacacatataattacactgagttatgtgattttatcaaattatta 11944673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 101 - 139
Target Start/End: Complemental strand, 13203685 - 13203647
Alignment:
Q  101 taattacactgaattatgttattttttcaaattattagt 139  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  13203685 taattacactgaattatgtaattttctcaaattattagt 13203647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 31557054 - 31557005
Alignment:
Q  87 gacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    |||| ||| |||||||||||||||||||||||| | |||||||||||||||    
T  31557054 gacaccgaaacttgtaattacactgaattatgtga-tttttcaaattatta 31557005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 41838131 - 41838181
Alignment:
Q  94 acacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||||||| || ||||||||||||| ||||||| |||||||||| |||||    
T  41838131 acacttgtagttgcactgaattatgtgatttttttaaattattagctgtgt 41838181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 3025595 - 3025558
Alignment:
Q  101 taattacactgaattatgttattttttcaaattattag 138  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  3025595 taattacactgaattatgtgattttctcaaattattag 3025558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 137
Target Start/End: Complemental strand, 28642457 - 28642416
Alignment:
Q  96 acttgtaattacactgaattatgttattttttcaaattatta 137  Q
    ||||||| |||||||||||||||| | |||||||||||||||    
T  28642457 acttgtagttacactgaattatgtaaatttttcaaattatta 28642416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 137
Target Start/End: Complemental strand, 44067569 - 44067524
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    |||||||| ||||||||||| ||||||| ||||| |||||||||||    
T  44067569 cgacacttataattacactgtattatgtcattttctcaaattatta 44067524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 71 - 131
Target Start/End: Original strand, 10497801 - 10497861
Alignment:
Q  71 tgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaa 131  Q
    |||||||||||||||||| |  ||||||||| ||||||   |||||||||||||| |||||    
T  10497801 tgttcgacaccgacacgatactgacacttgtgattacatcaaattatgttattttctcaaa 10497861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 25886999 - 25887071
Alignment:
Q  92 cgacacttgtaattacactgaattatgttatttt-ttcaaattattagttgtgtaggtgtgtccgtgtcgtgt 163  Q
    |||||||| |||||||| | |||||||| ||||| ||||||||||||   ||||  |||||||||||||||||    
T  25886999 cgacacttataattacattaaattatgtaatttttttcaaattattaacggtgtttgtgtgtccgtgtcgtgt 25887071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 31236583 - 31236647
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgt 156  Q
    |||||| | |||||||| |||||||||| ||||| ||||||||||||  |||| || ||||||||    
T  31236583 cgacacatataattacattgaattatgtgattttctcaaattattagcagtgtcggcgtgtccgt 31236647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 103 - 170
Target Start/End: Complemental strand, 40063993 - 40063928
Alignment:
Q  103 attacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgt 170  Q
    |||||| |||||||||| ||||| ||||||||||| | |||| |  ||||||||||||||||| ||||    
T  40063993 attacaatgaattatgtcattttctcaaattattattggtgtcg--gtgtccgtgtcgtgtccagtgt 40063928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 2e-26; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 36756273 - 36756402
Alignment:
Q  20 taatgaagcacggacattccttggattagacgtgttgcggtatcagaca-----cgtgttcgacaccgacacgacatcgacacttgtaattacactgaat 114  Q
    ||||||||||| |||| |||| ||||||| ||||||||||| || ||||      |||||||||||  |||||||| |||||||| ||||||||||||||    
T  36756273 taatgaagcacagacactcctaggattaggcgtgttgcggtgtcggacatgtgttgtgttcgacactaacacgacaccgacacttataattacactgaat 36756372  T
Q  115 tatgttattttttcaaattattagttgtgt 144  Q
    |||||||||| |||||||||||||||||||    
T  36756373 tatgttatttcttcaaattattagttgtgt 36756402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 30717513 - 30717603
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||| ||| |||| |||||    
T  30717513 cgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctttgtcggtttgtcagtgtc 30717603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 22 - 144
Target Start/End: Original strand, 11223795 - 11223921
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagaca----cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattat 117  Q
    |||||||||||||| ||||  |||||| |||||  |||| |||||||    ||||| ||||||| ||| |||| ||||||||||||||||||||||||||    
T  11223795 atgaagcacggacactcctcagattaggcgtgtcccggtgtcagacagtgtcgtgtccgacacctacatgacaccgacacttgtaattacactgaattat 11223894  T
Q  118 gttattttttcaaattattagttgtgt 144  Q
    |||||||||||||| |||||| |||||    
T  11223895 gttattttttcaaaatattagctgtgt 11223921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 69 - 172
Target Start/End: Complemental strand, 26769587 - 26769484
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggt 168  Q
    ||||| ||| ||||||| |||| ||||||||||||||||||   || |||| || ||||||||||||||||||||| || ||||| ||||||||||||||    
T  26769587 cgtgtccgataccgacatgacaccgacacttgtaattacaccagataatgtgatattttcaaattattagttgtgtcggcgtgtctgtgtcgtgtccggt 26769488  T
Q  169 gtcc 172  Q
    ||||    
T  26769487 gtcc 26769484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 37419871 - 37419752
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagaca-----cgtgttcgacaccgacacgacatcgacacttgtaattacactgaatta 116  Q
    |||||||||||||| |||| ||||||| |||||  |||| || ||||     ||||| |||||||||||||||| || |||||||||||||||||||||     
T  37419871 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacacgacaccggcacttgtaattacactgaattt 37419772  T
Q  117 tgttattttttcaaattatt 136  Q
    ||| ||||||||||||||||    
T  37419771 tgtgattttttcaaattatt 37419752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 94 - 177
Target Start/End: Original strand, 38117167 - 38117250
Alignment:
Q  94 acacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtccttatc 177  Q
    |||||||||||||||| ||| ||||| |||||||||||||||||| ||||| || ||||| |||||||||||||||||| ||||    
T  38117167 acacttgtaattacaccgaagtatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtcgtgtccggtgtccgtatc 38117250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 76 - 138
Target Start/End: Original strand, 4882686 - 4882748
Alignment:
Q  76 gacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||    
T  4882686 gacaccgacacgacatcgacacttgtaattacactgaattatatcattttttcaaataattag 4882748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 79 - 153
Target Start/End: Original strand, 12668416 - 12668490
Alignment:
Q  79 accgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtc 153  Q
    |||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||| ||| || |||||    
T  12668416 accgacacgacaccgacacttataattacactgaattatgtcattttttcaaattattagttatgtcggcgtgtc 12668490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 86 - 178
Target Start/End: Original strand, 19536397 - 19536496
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgtta-ttttttcaaattattagttgtgtaggtg------tgtccgtgtcgtgtccggtgtccttatct 178  Q
    ||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||| || |      ||||||||||||||||||||||| |||||    
T  19536397 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatct 19536496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 93 - 172
Target Start/End: Original strand, 21374706 - 21374786
Alignment:
Q  93 gacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgt-cgtgtccggtgtcc 172  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||| || ||||  |||| ||||||||||||||    
T  21374706 gacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtccggtgtcc 21374786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 974809 - 974748
Alignment:
Q  83 acacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    |||||||| ||||||||||||||||||||||| |||| || |||||||||||||||||||||    
T  974809 acacgacaccgacacttgtaattacactgaataatgtgatcttttcaaattattagttgtgt 974748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 86 - 159
Target Start/End: Complemental strand, 15972932 - 15972859
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| |||||||||||||||||||||||| ||| ||||||||||||||||| |||||| || ||||| |||||    
T  15972932 cgacaccgacacttgtaattacactgaattgtgtaattttttcaaattattaattgtgtcggcgtgtcagtgtc 15972859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 18841014 - 18841071
Alignment:
Q  87 gacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    |||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  18841014 gacaccgacacttgtaattacacttaattatgtaattttttcaaattattagttgtgt 18841071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 77 - 153
Target Start/End: Original strand, 23058433 - 23058510
Alignment:
Q  77 acaccgacacgacatcgacacttgtaattacactgaattatgtta-ttttttcaaattattagttgtgtaggtgtgtc 153  Q
    |||||||||||||| |||||||||||||||||||| ||||||| | |||||||||||||||| |||||| || |||||    
T  23058433 acaccgacacgacaccgacacttgtaattacactggattatgtgatttttttcaaattattaattgtgtgggcgtgtc 23058510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 2438719 - 2438777
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||| |||||||||||||||||||||||||||| ||||||| |||||||||| |||||    
T  2438719 cgacaccgacacttgtaattacactgaattatgtgattttttgaaattattagctgtgt 2438777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 83 - 141
Target Start/End: Complemental strand, 15657926 - 15657868
Alignment:
Q  83 acacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttg 141  Q
    |||||||| ||||| |||||||||||||||||||||| |||||| ||||||||||||||    
T  15657926 acacgacaccgacatttgtaattacactgaattatgtgatttttacaaattattagttg 15657868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 20473381 - 20473323
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    |||||||||||||||||||||||||||||||| | | ||||| ||||||||||||||||    
T  20473381 cgacatcgacacttgtaattacactgaattatatgagttttttaaattattagttgtgt 20473323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 30335476 - 30335418
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||| ||||| ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  30335476 cgacaccgacatttgtaattacactaaattatgtcattttttcaaattattagttgtgt 30335418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 12940940 - 12940993
Alignment:
Q  91 tcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    |||||| |||||||||||||||||||| | ||||||||||||||||||||||||    
T  12940940 tcgacatttgtaattacactgaattatatgattttttcaaattattagttgtgt 12940993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 159
Target Start/End: Complemental strand, 18422022 - 18421949
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| |||||||||||||||||||||||||||| || |||| ||||||||| |||||| || ||||| |||||    
T  18422022 cgacaccgacacttgtaattacactgaattatgtgatatttttaaattattaattgtgtcggcgtgtcagtgtc 18421949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 30404856 - 30404901
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  30404856 cgacacttgtaattacactgaattatgtgattttttcaaattatta 30404901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 159
Target Start/End: Complemental strand, 37559036 - 37558963
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| ||||||||||||||||| |||||||||| |||||| ||||||||||| ||||| || ||||| |||||    
T  37559036 cgacaccgacacttgtaattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtc 37558963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 84 - 144
Target Start/End: Original strand, 20539672 - 20539732
Alignment:
Q  84 cacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||||| ||||||||||||||||||| |||||| | |||||||||||||||||| |||||    
T  20539672 cacgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgt 20539732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 32 - 144
Target Start/End: Original strand, 14996171 - 14996282
Alignment:
Q  32 gacattccttggattagacgtgttgcggtatcagacacgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgtta-ttttttcaa 130  Q
    |||| |||| ||||||| |||||| |||| ||||||||||||  | |  ||||| |||| ||||||||||||||||||| |||||| | | |||||||||    
T  14996171 gacactcctcggattaggcgtgttccggtgtcagacacgtgtgtgtc--cgacaagacaccgacacttgtaattacactaaattatatgatttttttcaa 14996268  T
Q  131 attattagttgtgt 144  Q
    |||||||| |||||    
T  14996269 attattagctgtgt 14996282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 93 - 159
Target Start/End: Complemental strand, 21091775 - 21091709
Alignment:
Q  93 gacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||||||||||||||||||| ||||||||||| | ||||||||||  |||| |||||||| |||||    
T  21091775 gacacttgtaattacactgaagtatgttattttcttaaattattagcggtgtcggtgtgtcagtgtc 21091709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 86 - 159
Target Start/End: Complemental strand, 21624326 - 21624252
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgtta-ttttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| ||||||||||||||||||||||||||| || |||||| |||||||||| ||||| || ||||| |||||    
T  21624326 cgacaccgacacttgtaattacactgaattatgctatttttttaaaattattagctgtgtcggcgtgtcagtgtc 21624252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 34784965 - 34785055
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| ||| |||||||||||| |||||| | |||||||||| |||||||| ||||| | |||  ||||||||||| |||||||| |||||    
T  34784965 cgtgtccgataccgacacgacaccgacacatataattacactaaattatgtgattttctaaaaaaattagttgtgtcggtgtgtcagtgtc 34785055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 87 - 172
Target Start/End: Original strand, 42832277 - 42832363
Alignment:
Q  87 gacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgt-cgtgtccggtgtcc 172  Q
    |||| |||||||| ||||||||||||| ||||| ||||| ||||||||||||  |||| |||||||| | || ||||||||||||||    
T  42832277 gacaccgacacttataattacactgaaatatgtaattttctcaaattattagcggtgtcggtgtgtctgagtccgtgtccggtgtcc 42832363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 33153488 - 33153431
Alignment:
Q  81 cgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||||||||  ||||||||||||||||||||||||||| ||||||| |||| |||||    
T  33153488 cgacacgacacggacacttgtaattacactgaattatgtgatttttttaaatcattag 33153431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 39323316 - 39323271
Alignment:
Q  93 gacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||    
T  39323316 gacacttgtaattacactgaattatgtaattttgtcaaattattag 39323271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 6940308 - 6940241
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||||||||||||||||| |||||||| | ||||| |||||||||| ||||| || ||||| |||||    
T  6940308 cgacacttgtaattacacttaattatgtaactttttaaaattattagctgtgtcggcgtgtcagtgtc 6940241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 80 - 159
Target Start/End: Complemental strand, 24894454 - 24894375
Alignment:
Q  80 ccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||||||| | | |||||| ||||| ||||||||||||| ||||||| |||||||||| ||||| || ||||| |||||    
T  24894454 ccgacacgaaaccaacacttttaattgcactgaattatgtgatttttttaaattattagctgtgtcggcgtgtcagtgtc 24894375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 101 - 159
Target Start/End: Complemental strand, 21616806 - 21616748
Alignment:
Q  101 taattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||||||||||||||||| ||||| ||||||||||||  |||| || |||||||||||    
T  21616806 taattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtc 21616748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 170
Target Start/End: Complemental strand, 44860388 - 44860297
Alignment:
Q  77 acaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgt 170  Q
    ||||| |||||||| |||||| | ||||||||||||||||||  ||||| ||||||||||||  ||||    |||||||||||||||| |||||    
T  44860388 acaccaacacgacaccgacacatataattacactgaattatgcgattttctcaaattattagcggtgt--cagtgtccgtgtcgtgtctggtgt 44860297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 28677953 - 28677916
Alignment:
Q  101 taattacactgaattatgttattttttcaaattattag 138  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  28677953 taattacactgaattatgtgattttttcaaattattag 28677916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 44605145 - 44605190
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    |||||| |||||||||| |||||||||||||||| |||||||||||    
T  44605145 cgacacatgtaattacattgaattatgttattttctcaaattatta 44605190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 82 - 166
Target Start/End: Original strand, 29970545 - 29970629
Alignment:
Q  82 gacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccg 166  Q
    |||||||||||||||| | | ||||||||||| ||||  ||||| ||||||||||||  ||||   |||||| ||||||||||||    
T  29970545 gacacgacatcgacacatatgattacactgaactatgcgattttctcaaattattagcggtgtcaatgtgtcagtgtcgtgtccg 29970629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 35056944 - 35056896
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattat 117  Q
    ||||| |||||||||||||||| |||||| | |||||||||||||||||    
T  35056944 cgtgtccgacaccgacacgacaccgacacatataattacactgaattat 35056896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 37411244 - 37411296
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    |||||||||||| | |||| |||||||||||||| ||||| ||||||||||||    
T  37411244 cgacatcgacacatataatcacactgaattatgtgattttctcaaattattag 37411296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 137
Target Start/End: Complemental strand, 40682050 - 40681990
Alignment:
Q  77 acaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    ||||| ||||||||| ||||| || ||||||| |||||||||| ||||| |||||||||||    
T  40682050 acaccaacacgacattgacacgtgcaattacattgaattatgtcattttctcaaattatta 40681990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 138
Target Start/End: Complemental strand, 5040793 - 5040739
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgt--tattttttcaaattattag 138  Q
    ||||| ||||||||||||||||| ||||||||||  | |||||||||||||||||    
T  5040793 cgacaccgacacttgtaattacattgaattatgtgattttttttcaaattattag 5040739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 18054718 - 18054769
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgt 73  Q
    |||||||||||||||||||||||| || |||||| | || ||||||||||||    
T  18054718 atgaagcacggacattccttggataaggcgtgtttccgtgtcagacacgtgt 18054769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 23718079 - 23718012
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||||| | ||||||||||||||||||| | ||| ||||||||||||  |||| |||||||| |||||    
T  23718079 cgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtc 23718012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 24105751 - 24105684
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||||| | ||||||||||||||||||| | ||| ||||||||||||  |||| |||||||| |||||    
T  24105751 cgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtc 24105684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 29176501 - 29176579
Alignment:
Q  94 acacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtcc 172  Q
    |||||| ||||||||||||||||||| |  ||||||||||||||  |||||  | ||||  ||||||||| ||||||||    
T  29176501 acacttataattacactgaattatgtgaccttttcaaattattaactgtgtctgcgtgtaagtgtcgtgtgcggtgtcc 29176579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 98 - 159
Target Start/End: Original strand, 29367381 - 29367443
Alignment:
Q  98 ttgtaattacactgaattatgtta-ttttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||||||||||||||||||||| | |||||| ||||||||| |||||  || |||||||||||    
T  29367381 ttgtaattacactgaattatgtgatttttttaaaattattaattgtgccggcgtgtccgtgtc 29367443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 101 - 159
Target Start/End: Complemental strand, 31808121 - 31808063
Alignment:
Q  101 taattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||||||||||||||||| ||||| | ||||||||||  |||| |||||||| |||||    
T  31808121 taattacactgaattatgtgattttgttaaattattagcggtgtcggtgtgtcagtgtc 31808063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 139
Target Start/End: Complemental strand, 5367251 - 5367198
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagt 139  Q
    ||||| |||||| | ||||||||||||||||||| ||||  |||||||||||||    
T  5367251 cgacaccgacacatataattacactgaattatgtgatttcctcaaattattagt 5367198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 10535765 - 10535810
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    |||||||| | ||||||||||||||||| ||||| |||||||||||    
T  10535765 cgacacttatgattacactgaattatgtcattttctcaaattatta 10535810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 139
Target Start/End: Complemental strand, 18622669 - 18622612
Alignment:
Q  82 gacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagt 139  Q
    ||||||||| | |||| | ||||||||||||||||||| ||||| | |||||||||||    
T  18622669 gacacgacaccaacacgtataattacactgaattatgtgattttattaaattattagt 18622612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 20242727 - 20242800
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| |||||| | ||||||||||||||||||| ||||| | |||  ||||||||||| || ||||| |||||    
T  20242727 cgacaccgacacatataattacactgaattatgtgattttctaaaaaaattagttgtgtcggcgtgtcagtgtc 20242800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 21782833 - 21782870
Alignment:
Q  101 taattacactgaattatgttattttttcaaattattag 138  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  21782833 taattacactgaattatgtgattttctcaaattattag 21782870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 138
Target Start/End: Original strand, 27286275 - 27286344
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||| ||||| ||||| ||||| ||||| | |||||||||| |||||||| || || ||||||||||||    
T  27286275 cgtgtccgacatcgacatgacattgacacctataattacacttaattatgtgatcttatcaaattattag 27286344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 34337165 - 34337225
Alignment:
Q  70 gtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattat 135  Q
    |||| ||||||||||| |||| |||||||||||||||     |||||||| |||||||||||||||    
T  34337165 gtgtccgacaccgacaggacaccgacacttgtaatta-----aattatgtgattttttcaaattat 34337225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 103 - 135
Target Start/End: Original strand, 11308021 - 11308053
Alignment:
Q  103 attacactgaattatgttattttttcaaattat 135  Q
    ||||||||||||||||| |||||||||||||||    
T  11308021 attacactgaattatgtcattttttcaaattat 11308053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 18420430 - 18420486
Alignment:
Q  82 gacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||| ||| |||||||| ||||| || |||||||||| ||||| ||||||||||||    
T  18420430 gacacaacaccgacacttataattgcattgaattatgtgattttctcaaattattag 18420486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 101 - 137
Target Start/End: Complemental strand, 19574022 - 19573986
Alignment:
Q  101 taattacactgaattatgttattttttcaaattatta 137  Q
    ||||||||||||||||||||||||| | |||||||||    
T  19574022 taattacactgaattatgttattttcttaaattatta 19573986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 101 - 137
Target Start/End: Complemental strand, 23921297 - 23921261
Alignment:
Q  101 taattacactgaattatgttattttttcaaattatta 137  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  23921297 taattacactgaattatgtaattttctcaaattatta 23921261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 101 - 137
Target Start/End: Complemental strand, 28412394 - 28412358
Alignment:
Q  101 taattacactgaattatgttattttttcaaattatta 137  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  28412394 taattacactgaattatgtgattttatcaaattatta 28412358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 34221503 - 34221555
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    |||||||||||||| ||  |||||||||  ||||||||||||||||| |||||    
T  34221503 cgacacttgtaattgcatagaattatgtatttttttcaaattattagctgtgt 34221555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 34691805 - 34691857
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||| |||||| | ||||||||||||||||| | ||||| ||||||||||||    
T  34691805 cgacaccgacacatataattacactgaattatatgattttatcaaattattag 34691857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 34714217 - 34714269
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||| |||||| | ||||||||||||||||| | ||||| ||||||||||||    
T  34714217 cgacaccgacacatataattacactgaattatatgattttatcaaattattag 34714269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 69 - 137
Target Start/End: Complemental strand, 36281761 - 36281693
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    ||||| |||||| ||||| ||||||| || | | |||||||| |||||||| ||||| |||||||||||    
T  36281761 cgtgtccgacacggacaccacatcgaaacatatgattacactaaattatgtgattttctcaaattatta 36281693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 135
Target Start/End: Original strand, 36409607 - 36409676
Alignment:
Q  64 agacacgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattat 135  Q
    ||||||||||  |||||| ||| |||| |||||| |  ||||||||| |||||||| |||||||||||||||    
T  36409607 agacacgtgtcagacaccaacatgacaccgacacat--aattacactaaattatgtgattttttcaaattat 36409676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 101 - 137
Target Start/End: Original strand, 40361769 - 40361805
Alignment:
Q  101 taattacactgaattatgttattttttcaaattatta 137  Q
    |||||||||| |||||||| |||||||||||||||||    
T  40361769 taattacactaaattatgtaattttttcaaattatta 40361805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 6e-26; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 22 - 153
Target Start/End: Complemental strand, 34910434 - 34910309
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgtta 121  Q
    |||||||||||||| |||| |||||||||||||  |||| |||      ||| ||||||||| |||||| |||| ||||||||||||||||||||||| |    
T  34910434 atgaagcacggacactcctcggattagacgtgtcccggtgtca------tgtccgacaccgatacgacaccgactcttgtaattacactgaattatgtga 34910341  T
Q  122 ttttttcaaattattagttgtgtaggtgtgtc 153  Q
    ||||||||||||||||||||||| || |||||    
T  34910340 ttttttcaaattattagttgtgtcggcgtgtc 34910309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 86 - 177
Target Start/End: Complemental strand, 10955011 - 10954919
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtg-tcgtgtccggtgtccttatc 177  Q
    ||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||| || ||||| ||| ||||||||||||||| ||||    
T  10955011 cgacaccgacacttgtgattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgttcgtgtccggtgtccgtatc 10954919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 14209189 - 14209105
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtc 153  Q
    ||||| ||||||||||||||||  ||||||||||||||||||||||||||| ||||||| |||||||||||||||| || |||||    
T  14209189 cgtgtccgacaccgacacgacactgacacttgtaattacactgaattatgtgattttttaaaattattagttgtgtcggcgtgtc 14209105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 92 - 166
Target Start/End: Complemental strand, 20503518 - 20503444
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccg 166  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||| || ||||| ||||||||||||    
T  20503518 cgacacttgtaattacactgaattatgtcattttttcaaattatttgttgtgtcggcgtgtcagtgtcgtgtccg 20503444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 86 - 172
Target Start/End: Complemental strand, 21479177 - 21479091
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtcc 172  Q
    ||||| ||||||| |||||||||||||||| ||| |||||||||||||||||| ||||| || ||||| ||||||||||||||||||    
T  21479177 cgacaccgacactagtaattacactgaattgtgtgattttttcaaattattagctgtgtcggcgtgtcagtgtcgtgtccggtgtcc 21479091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 158
Target Start/End: Original strand, 4987220 - 4987363
Alignment:
Q  20 taatgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgtt-----cgacaccgacacgacatcgacacttgtaattacactgaat 114  Q
    |||||||| ||||||| |||| ||||||| |||||  |||| || |||||||||      | ||||||||||| || | |||||||||||||||||||||    
T  4987220 taatgaagtacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaat 4987319  T
Q  115 tatgttattttttcaaattattagttgtgtaggtgtgtccgtgt 158  Q
    ||||| |||||||||||||||||| ||||| || ||||| ||||    
T  4987320 tatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 4987363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 22 - 172
Target Start/End: Original strand, 15796225 - 15796386
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgtt-----cgacaccgacacgacatcgacacttgtaattacactgaatta 116  Q
    |||||||||| ||| || ||||||||| |||||| |||| |  ||||||||||     ||||||| |||||||| ||||| |||||||||||||||||||    
T  15796225 atgaagcacgaacactctttggattaggcgtgttccggtgttggacacgtgttgtgtccgacacctacacgacaccgacaattgtaattacactgaatta 15796324  T
Q  117 tgttattttttcaaattattagttgtgtaggtg------tgtccgtgtcgtgtccggtgtcc 172  Q
    | | |||||||||||||||||  ||||| || |      |||||||||||||||||||||||    
T  15796325 tatgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtcc 15796386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 16000016 - 16000089
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||| || ||||| |||||    
T  16000016 cgacaccgacacttgtagttacactgaattatgttatttttttaaattattagttgtgtcggcgtgtcagtgtc 16000089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 76 - 153
Target Start/End: Complemental strand, 28812584 - 28812507
Alignment:
Q  76 gacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtc 153  Q
    |||||| |||||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||||| || |||||    
T  28812584 gacaccaacacgacaccgacacttgtaactacactgaattatgtgatttcttcaaattattagttgtgtcggcgtgtc 28812507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 170
Target Start/End: Original strand, 34185054 - 34185207
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgtt-----cgacaccgacacgacatcgacacttgtaattacactgaatta 116  Q
    |||||||||||||| |||| ||||||| |||||  |||| || ||||| |||      |||||  ||||||||| ||||||||||||||||||||||||     
T  34185054 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacatgtcttgtccgacatggacacgacaccgacacttgtaattacactgaattg 34185153  T
Q  117 tgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgt 170  Q
    ||| ||||||| ||||||||||  |||| || |||||  |||||||||||||||    
T  34185154 tgtgattttttgaaattattagccgtgtcggcgtgtcactgtcgtgtccggtgt 34185207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 76 - 144
Target Start/End: Complemental strand, 1509608 - 1509540
Alignment:
Q  76 gacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    |||||||| |||||| ||||||||||||||||||| |||||||| |||||||||||||||||| |||||    
T  1509608 gacaccgaaacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 1509540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 14747625 - 14747529
Alignment:
Q  82 gacacgacatcgacacttgtaattacactgaattatgttatttttt-caaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtccttatc 177  Q
    |||||||||  ||| |||||||||||||| |||||||| ||||||| ||||||||||| ||||| || ||||| |||||||||||||||||| ||||    
T  14747625 gacacgacacggacccttgtaattacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtcagtgtcgtgtccggtgtccgtatc 14747529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 84 - 172
Target Start/End: Complemental strand, 28918062 - 28917968
Alignment:
Q  84 cacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtg------tccgtgtcgtgtccggtgtcc 172  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||||| | ||| || |||      |||||||||||||||||||||    
T  28918062 cacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctatgtcggcgtgtcagtttccgtgtcgtgtccggtgtcc 28917968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 86 - 178
Target Start/End: Complemental strand, 55401134 - 55401036
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtagg------tgtgtccgtgtcgtgtccggtgtccttatct 178  Q
    ||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||       ||||||||||||| |||||||||| |||||    
T  55401134 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtatcagtgtccgtgtcgtatccggtgtccgtatct 55401036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 143
Target Start/End: Original strand, 41961633 - 41961707
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtg 143  Q
    ||||| ||| |||||||||||| |||||||||||||||||| |||| |||| || ||||||||||||||||||||    
T  41961633 cgtgtccgataccgacacgacaccgacacttgtaattacaccgaataatgtgatattttcaaattattagttgtg 41961707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 80 - 138
Target Start/End: Original strand, 49651780 - 49651838
Alignment:
Q  80 ccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||    
T  49651780 ccgacacgacaccgacacttgtaattacagtgaattatgtgattttttcaaattattag 49651838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 81 - 172
Target Start/End: Original strand, 3164020 - 3164117
Alignment:
Q  81 cgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt--aggtg----tgtccgtgtcgtgtccggtgtcc 172  Q
    |||||||||||| ||||||||  |||||||||||||||| |||||||||||||||||| |||||  | |||    |||||||||||||||||||||||    
T  3164020 cgacacgacatcaacacttgttcttacactgaattatgtgattttttcaaattattagctgtgtcgacgtgccattgtccgtgtcgtgtccggtgtcc 3164117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 76 - 137
Target Start/End: Original strand, 16192740 - 16192801
Alignment:
Q  76 gacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    ||||||||||||||||| |||| | ||||||||||||||||||||||||| |||||||||||    
T  16192740 gacaccgacacgacatcaacacatataattacactgaattatgttattttctcaaattatta 16192801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 26508163 - 26508111
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  26508163 cgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgt 26508111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 750601 - 750676
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||| ||| |||||||||||| |||||||||||||| ||  ||||||||| || |||||||||||||||||||||    
T  750601 cgtgtccgataccgacacgacaccgacacttgtaattgcagcgaattatgtgatattttcaaattattagttgtgt 750676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 14832175 - 14832088
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgt 156  Q
    ||||| ||| ||||||||||||  |||||||||||||||| ||| |||||| |||||||||||||||||| ||| | || ||||||||    
T  14832175 cgtgtccgataccgacacgacactgacacttgtaattacattgagttatgtgattttttcaaattattagctgtatcggcgtgtccgt 14832088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 82 - 177
Target Start/End: Complemental strand, 39756299 - 39756204
Alignment:
Q  82 gacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtccttatc 177  Q
    ||||||||| ||||||||||||||| | | |||||||| ||||||| ||||||||| || ||| || ||||| |||||||||||| ||||| ||||    
T  39756299 gacacgacaccgacacttgtaattatattaaattatgtgatttttttaaattattaattttgtcggcgtgtcagtgtcgtgtccgatgtccgtatc 39756204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 77 - 159
Target Start/End: Complemental strand, 14829757 - 14829676
Alignment:
Q  77 acaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||||||||||||| ||||||||||||||||  |||||||||| | |||||||||||||||| ||||| || ||||| |||||    
T  14829757 acaccgacacgacaccgacacttgtaattaccatgaattatgtga-tttttcaaattattagctgtgtcggcgtgtcagtgtc 14829676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 80 - 138
Target Start/End: Original strand, 25948881 - 25948939
Alignment:
Q  80 ccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||||||||| | |||||| ||||||||||||||||||| ||||||||||||||||||    
T  25948881 ccgacacgacaccaacacttataattacactgaattatgtgattttttcaaattattag 25948939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 144
Target Start/End: Complemental strand, 27505368 - 27505247
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgtta 121  Q
    |||||||||||||| |||| ||||||| | |||  |||| || ||||||||| ||   | ||||||||| ||||||||||||||||||| |||||||| |    
T  27505368 atgaagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgt-cgtgtcagacacgacaccgacacttgtaattacacttaattatgtga 27505270  T
Q  122 ttttttcaaattattagttgtgt 144  Q
    |||||  |||||||||| |||||    
T  27505269 tttttaaaaattattagctgtgt 27505247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 51206353 - 51206411
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||| ||||||||||| |||||||||||||||| |||||||||||||||||| |||||    
T  51206353 cgacaccgacacttgtatttacactgaattatgtgattttttcaaattattagctgtgt 51206411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 8587021 - 8587094
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| ||||||||||||||||||| |||||||| |||||||||||||| ||| ||||| || ||||| |||||    
T  8587021 cgacaccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtc 8587094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 153
Target Start/End: Complemental strand, 29508568 - 29508436
Alignment:
Q  21 aatgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgttcgacaccgacacga-catcgacacttgtaattacactgaattatgt 119  Q
    ||||||||||||||| | ||||||||||||||||  |||| || |||  |||| ||   ||||||| | ||||||||| | ||||||||||||||||| |    
T  29508568 aatgaagcacggacacttcttggattagacgtgtcccggtgtcggacgtgtgt-cgtgtccgacaccaacatcgacacatataattacactgaattatat 29508470  T
Q  120 tattttttcaaattattagttgtgtaggtgtgtc 153  Q
     ||||||||||||||||||| || | ||||||||    
T  29508469 gattttttcaaattattagtggtatcggtgtgtc 29508436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 21256992 - 21257044
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||| |||||    
T  21256992 cgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgt 21257044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 3610710 - 3610619
Alignment:
Q  69 cgtgttcgacaccgacacg-acatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| ||||||||| ||| ||| ||||||| ||||||||||||| |||||||||||||| |||||||||  ||||| || ||||| |||||    
T  3610710 cgtgtccgacaccgatacggacaacgacactggtaattacactgagttatgttatttttttaaattattaactgtgttggcgtgtcagtgtc 3610619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 75 - 138
Target Start/End: Original strand, 8039824 - 8039887
Alignment:
Q  75 cgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    |||||||||||||||| |||||| | ||||||||||||||||| | ||||| ||||||||||||    
T  8039824 cgacaccgacacgacaccgacacatataattacactgaattatataattttctcaaattattag 8039887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 177
Target Start/End: Original strand, 8789550 - 8789641
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtccttatc 177  Q
    ||||| |||||| | ||||||||| ||||||||| ||||| ||||||||| ||  |||| |||||||| |||| ||||||||||||| ||||    
T  8789550 cgacaccgacacatataattacacggaattatgtgattttctcaaattataagccgtgtcggtgtgtctgtgttgtgtccggtgtccgtatc 8789641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 144
Target Start/End: Complemental strand, 14216968 - 14216893
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||| ||||||  ||||||||  ||||||||||||||||||||||||| | || |||| ||||||||||||||||    
T  14216968 cgtgtccgacactaacacgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgt 14216893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 144
Target Start/End: Complemental strand, 14223097 - 14223022
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||| ||||||  ||||||||  ||||||||||||||||||||||||| | || |||| ||||||||||||||||    
T  14223097 cgtgtccgacactaacacgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgt 14223022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 76 - 159
Target Start/End: Original strand, 17005609 - 17005692
Alignment:
Q  76 gacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||||| |||| ||| |||||||| ||||||||||||||||| | ||||| ||||||||||||| |||| |||| ||| |||||    
T  17005609 gacaccaacacaacaccgacacttataattacactgaattatatgattttatcaaattattagtggtgttggtgagtcagtgtc 17005692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 10268493 - 10268559
Alignment:
Q  93 gacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||||||||||||||||| |||||||| |||||||||||||||||  ||||| || ||||| |||||    
T  10268493 gacacttgtaattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtc 10268559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 86 - 159
Target Start/End: Complemental strand, 25775568 - 25775494
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttatt-ttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| |||||||||||||||||||||||||||| ||| ||||||||||||||  ||||| || ||||| |||||    
T  25775568 cgacaccgacacttgtaattacactgaattatgtgattattttcaaattattaaatgtgttggcgtgtcagtgtc 25775494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 10335286 - 10335359
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| ||||||||||| ||||||| || ||||| | |||||||||||||||||||||| || ||||| |||||    
T  10335286 cgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagttgtgtcggcgtgtcagtgtc 10335359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 138
Target Start/End: Complemental strand, 7928509 - 7928457
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||| |||||| | ||||||||||||||||||| ||||||||||||||||||    
T  7928509 cgacaccgacacatataattacactgaattatgtgattttttcaaattattag 7928457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 35994744 - 35994795
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    |||||||||||||||||||||||||||| | |||||||||||||||| |||||    
T  35994744 cgacacttgtaattacactgaattatgtga-tttttcaaattattagctgtgt 35994795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 40052367 - 40052311
Alignment:
Q  110 tgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccg 166  Q
    |||||||||| |||||||||||||||||| ||||| || ||||| ||||||||||||    
T  40052367 tgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtcgtgtccg 40052311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 4990964 - 4991019
Alignment:
Q  83 acacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    |||||||  |||||||||||||||||||||||||||| ||||| ||||| ||||||    
T  4990964 acacgacgccgacacttgtaattacactgaattatgtaattttctcaaactattag 4991019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 79 - 138
Target Start/End: Complemental strand, 9800106 - 9800047
Alignment:
Q  79 accgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    |||||||||||| ||||||||  |||||||| ||||||||| ||||| ||||||||||||    
T  9800106 accgacacgacaccgacacttacaattacacggaattatgtaattttctcaaattattag 9800047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 138
Target Start/End: Complemental strand, 11666070 - 11665951
Alignment:
Q  24 gaagcacggacattccttggattagacgtgttgcggtatcagacacgtgt----tc-gacaccgacacgacatcgacacttgtaattacactgaattatg 118  Q
    |||||||||||| |||||| ||||| |||||| || ||||||||||||||    ||  ||| | |||||||| |||||| | |||||||||| |||| ||    
T  11666070 gaagcacggacactccttgaattaggcgtgttccgatatcagacacgtgtcgtgtctaacatcaacacgacaccgacacatataattacactaaattgtg 11665971  T
Q  119 ttattttttcaaattattag 138  Q
    | ||||| ||||||||||||    
T  11665970 tgattttatcaaattattag 11665951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 144
Target Start/End: Complemental strand, 14979224 - 14979182
Alignment:
Q  102 aattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    |||||||||||||||||| |||||||||||||||||| |||||    
T  14979224 aattacactgaattatgtgattttttcaaattattagctgtgt 14979182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 137
Target Start/End: Complemental strand, 16789082 - 16789020
Alignment:
Q  75 cgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    |||||| ||||||||| | |||||| ||||||||||||||||| | ||||||| |||||||||    
T  16789082 cgacactgacacgacaccaacacttataattacactgaattatatgatttttttaaattatta 16789020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 101 - 159
Target Start/End: Complemental strand, 18426993 - 18426935
Alignment:
Q  101 taattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||||||| ||||||||| ||||||| ||||||||||| |||| || |||||||||||    
T  18426993 taattacaccgaattatgtgattttttgaaattattagtggtgtcggcgtgtccgtgtc 18426935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 41319326 - 41319388
Alignment:
Q  102 aattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtc 164  Q
    ||||||| |||||||||| ||||||||||||||||| | |||| |  ||||||||||||||||    
T  41319326 aattacattgaattatgtcattttttcaaattattattggtgtcgacgtgtccgtgtcgtgtc 41319388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 137
Target Start/End: Complemental strand, 55213032 - 55212971
Alignment:
Q  75 cgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    |||||||||||| ||| |||||||||||||| |||| |||||||| ||||||| |||||||||    
T  55213032 cgacaccgacac-acaccgacacttgtaattgcactaaattatgtgattttttaaaattatta 55212971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 11610573 - 11610528
Alignment:
Q  93 gacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||||||||| ||||||||||||||| ||||||| ||||||||||    
T  11610573 gacacttgtaactacactgaattatgtgatttttttaaattattag 11610528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 26492205 - 26492278
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| ||| |||||||||||||||||||| | | |||||||||||||||||| | ||| || ||||| |||||    
T  26492205 cgacaccgatacttgtaattacactgaattgtatgattttttcaaattattagctctgtcggcgtgtcagtgtc 26492278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 86 - 166
Target Start/End: Original strand, 40993335 - 40993416
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgtta-ttttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccg 166  Q
    ||||| |||||| | ||||||||||||||||||| | |||||| ||||||||||  |||| |  ||||||||||||||||||    
T  40993335 cgacaccgacacatataattacactgaattatgtgattttttttaaattattagcggtgtcgaggtgtccgtgtcgtgtccg 40993416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 138
Target Start/End: Complemental strand, 8383316 - 8383264
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||| |||||||| ||||||||||||||||| | ||||| ||||||||||||    
T  8383316 cgacaccgacacttataattacactgaattatatgattttctcaaattattag 8383264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 8593196 - 8593137
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttatttttt-caaattattagttgtgt 144  Q
    ||||| ||||||||||||||| |||||||||||| ||||||| ||||||| ||| |||||    
T  8593196 cgacaccgacacttgtaattatactgaattatgtgattttttccaaattagtagctgtgt 8593137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 158
Target Start/End: Complemental strand, 11155094 - 11155012
Alignment:
Q  80 ccgacacgacatcgacacttgtaattacact-----gaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgt 158  Q
    ||||||||||| ||| |||||||||||||||     ||||||||| | ||||||||||||||||  |||| |||||||||||||    
T  11155094 ccgacacgacaccgatacttgtaattacactacactgaattatgtaaatttttcaaattattag-cgtgtcggtgtgtccgtgt 11155012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 139
Target Start/End: Complemental strand, 12083955 - 12083909
Alignment:
Q  93 gacacttgtaattacactgaattatgttattttttcaaattattagt 139  Q
    |||||||||||||||||||||||||||  |||| |||| ||||||||    
T  12083955 gacacttgtaattacactgaattatgtagttttctcaatttattagt 12083909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 34307786 - 34307832
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    |||||||| ||||||||||||| ||||| ||||| ||||||||||||    
T  34307786 cgacacttataattacactgaaatatgtgattttctcaaattattag 34307832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 138
Target Start/End: Complemental strand, 1550208 - 1550147
Alignment:
Q  77 acaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    |||| |||||||||  ||||| | ||||||||||||||  ||| ||||||||||||||||||    
T  1550208 acactgacacgacactgacacctataattacactgaatagtgtgattttttcaaattattag 1550147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 11252022 - 11251985
Alignment:
Q  101 taattacactgaattatgttattttttcaaattattag 138  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  11252022 taattacactgaattatgtgattttctcaaattattag 11251985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 12704051 - 12703998
Alignment:
Q  101 taattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtcc 154  Q
    |||||||||||||||||||  |||| ||||||||||||| |||| || ||||||    
T  12704051 taattacactgaattatgtgcttttctcaaattattagtggtgtcggcgtgtcc 12703998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 15314873 - 15314934
Alignment:
Q  83 acacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    |||||||| | |||| | |||||||||| |||||||| |||||||||||||| || ||||||    
T  15314873 acacgacaccaacacatataattacactaaattatgtgattttttcaaattaataattgtgt 15314934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 144
Target Start/End: Original strand, 22774063 - 22774128
Alignment:
Q  79 accgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||||| |||| |||||||| ||||||||||||| ||||| | ||| || |||||||||| ||||    
T  22774063 accgacatgacaccgacacttataattacactgaaatatgtgactttgtctaattattagtggtgt 22774128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 24205047 - 24205092
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    |||||||| ||||||||||| ||||||| ||||| |||||||||||    
T  24205047 cgacacttataattacactgtattatgtcattttctcaaattatta 24205092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 25948847 - 25948880
Alignment:
Q  21 aatgaagcacggacattccttggattagacgtgt 54  Q
    ||||||||||||||||||||||||||| ||||||    
T  25948847 aatgaagcacggacattccttggattacacgtgt 25948880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 137
Target Start/End: Complemental strand, 35312107 - 35312062
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    |||||||||||||||||||||||||||| |  |||| |||||||||    
T  35312107 cgacacttgtaattacactgaattatgtaacatttttaaattatta 35312062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 1438848 - 1438784
Alignment:
Q  101 taattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtcc 165  Q
    |||||| |||||||||||| ||||| ||||||| ||||   ||| |||||||| |||||||||||    
T  1438848 taattatactgaattatgtgattttctcaaattgttagcgatgtcggtgtgtcagtgtcgtgtcc 1438784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 101 - 137
Target Start/End: Complemental strand, 4201440 - 4201404
Alignment:
Q  101 taattacactgaattatgttattttttcaaattatta 137  Q
    |||||||||| |||||||| |||||||||||||||||    
T  4201440 taattacacttaattatgtgattttttcaaattatta 4201404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 8412960 - 8413012
Alignment:
Q  101 taattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtc 153  Q
    |||||| ||||||||||||  |||| |||||||||||||||||| ||| ||||    
T  8412960 taattaaactgaattatgtgtttttctcaaattattagttgtgtcggtctgtc 8413012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 14028067 - 14027982
Alignment:
Q  85 acgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtcc 172  Q
    |||||| |||||| | ||||||||||| ||| ||| ||||| | |||  ||||| ||||| |||||  ||||||||||||||||||||    
T  14028067 acgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggtgt--ccgtgtcgtgtccggtgtcc 14027982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 93 - 172
Target Start/End: Complemental strand, 33359813 - 33359733
Alignment:
Q  93 gacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc-gtgtccggtgtcc 172  Q
    |||||||||| ||||||| || ||||| |  ||||||||||||||| |||||  | ||||| ||||| |||||||||||||    
T  33359813 gacacttgtatttacactaaaatatgtgaccttttcaaattattagctgtgtcagcgtgtcagtgtctgtgtccggtgtcc 33359733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 86 - 138
Target Start/End: Complemental strand, 38731277 - 38731225
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||| |||||| | ||| ||||||||||||||| ||||||| ||||||||||    
T  38731277 cgacaccgacacatataactacactgaattatgtgattttttaaaattattag 38731225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 78 - 178
Target Start/End: Complemental strand, 20239 - 20133
Alignment:
Q  78 caccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtg------tgtccgtgtcgtgtccggtgtc 171  Q
    |||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||| ||||| || |      ||||||||||||||||||||||    
T  20239 caccgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtc 20140  T
Q  172 cttatct 178  Q
    | |||||    
T  20139 cgtatct 20133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 22 - 177
Target Start/End: Complemental strand, 71853 - 71691
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgtt-----cgacaccgacacgacatcgacacttgtaattacactgaatta 116  Q
    ||||||||| |||| |||| ||||||| |||||  |||| || ||||||||||     ||||||||||||||||  |||||| ||||||||||||||||     
T  71853 atgaagcaccgacactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacactgacactagtaattacactgaattg 71754  T
Q  117 tgt--tattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtccttatc 177  Q
    |||  | ||||||||||||||||| ||||| || ||||| |||||||||||| ||||| ||||    
T  71753 tgtgattttttttcaaattattagctgtgtcggcgtgtcagtgtcgtgtccgatgtccgtatc 71691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 144
Target Start/End: Original strand, 24613632 - 24613759
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgt----tc-gacaccgacacgacatcgacacttgtaattacactgaatta 116  Q
    |||||||||||||| |||| |||||||||||||   ||| ||||||||||||    || |||||||||| |||| ||||||||||| ||||| |||||||    
T  24613632 atgaagcacggacactcctaggattagacgtgtcctggtgtcagacacgtgtcgtgtctgacaccgacatgacaccgacacttgtacttacattgaatta 24613731  T
Q  117 tgttattttttcaaattattagttgtgt 144  Q
    ||| ||||| ||||||||||||||||||    
T  24613732 tgtgattttctcaaattattagttgtgt 24613759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 69 - 144
Target Start/End: Complemental strand, 51701334 - 51701259
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||||||||||||||||||||   ||||||||||||||||| |||||||| |||||||||||||||||| |||||    
T  51701334 cgtgttcgacaccgacacgacactaacacttgtaattacactcaattatgtaattttttcaaattattagctgtgt 51701259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 159
Target Start/End: Original strand, 3947703 - 3947839
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgtta 121  Q
    |||||||||||||| |||| |||||||  ||||   ||| || ||||||||| ||   |||||||||||  ||||||||||||||||||||||||||  |    
T  3947703 atgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgt-cgtgtccgacacgacactgacacttgtaattacactgaattatgcga 3947801  T
Q  122 ttttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||||||||||||||| ||||| ||  ||||||||||    
T  3947802 ttttttcaaattattagctgtgtcggcatgtccgtgtc 3947839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 57 - 163
Target Start/End: Complemental strand, 50280970 - 50280863
Alignment:
Q  57 cggtatcagacacgtgttcgacaccgacacgacatcgacacttgtaattacac--tgaattatgttattttttcaaattattagttgtgtaggtgtgtcc 154  Q
    |||| |||||||||||| |||||| ||||||||| || |||||||||||||||  | |||||||| | |||||||||||||||| ||||| || ||||||    
T  50280970 cggtgtcagacacgtgtccgacac-gacacgacaccggcacttgtaattacacacttaattatgtgaatttttcaaattattagctgtgtcggcgtgtcc 50280872  T
Q  155 gtgtcgtgt 163  Q
    |||||||||    
T  50280871 gtgtcgtgt 50280863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 79 - 159
Target Start/End: Complemental strand, 19482734 - 19482654
Alignment:
Q  79 accgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||||||||||| | |||||||||||||||| ||||||||| || ||||||||||||||||||||| || ||||| |||||    
T  19482734 accgacacgacaccaacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtc 19482654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 22 - 153
Target Start/End: Original strand, 32273463 - 32273593
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgtta 121  Q
    ||||||||| |||| |||||||||| | |||||  | ||||| || |||||| ||   ||||| ||||||||| |||| ||||||  |||||||||||||    
T  32273463 atgaagcaccgacactccttggatttgtcgtgtccccgtatcggatacgtgt-cgtgtccgactcgacatcgaaacttataattattctgaattatgtta 32273561  T
Q  122 ttttttcaaattattagttgtgtaggtgtgtc 153  Q
    ||||||||||||||||||||||| || |||||    
T  32273562 ttttttcaaattattagttgtgttggcgtgtc 32273593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 21945562 - 21945504
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  21945562 cgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagctgtgt 21945504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 54580023 - 54580081
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  54580023 cgacaccgacacttataattacactgaattatgtgattttttcaaattattagttgtgt 54580081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 4383443 - 4383371
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgt 142  Q
    |||||| |||||||||||||||  |||| |||||||||||||||||||||| | ||||||||||||||||||||    
T  4383443 cgtgtttgacaccgacacgacactgacatttgtaattacactgaattatgtga-tttttcaaattattagttgt 4383371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 86 - 172
Target Start/End: Original strand, 23292986 - 23293078
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtg------tgtccgtgtcgtgtccggtgtcc 172  Q
    ||||| ||||||||||||||| |||||||||||| |||||||||||||||||| ||||| || |      |||||||||||||||||||||||    
T  23292986 cgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtcc 23293078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 11596348 - 11596404
Alignment:
Q  82 gacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||    
T  11596348 gacacgacacctacacttgtaattacactgaattatgtgattttttcaaattattag 11596404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 30299008 - 30298932
Alignment:
Q  84 cacgacatcgacacttgtaattacactgaattatgtta-ttttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||||||||||| ||||| || ||||| |||||    
T  30299008 cacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtc 30298932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 30327876 - 30327800
Alignment:
Q  84 cacgacatcgacacttgtaattacactgaattatgtta-ttttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||||||||||| ||||| || ||||| |||||    
T  30327876 cacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtc 30327800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 138
Target Start/End: Original strand, 30982809 - 30982930
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgt----tc-gacaccgacacgacatcgacacttgtaattacactgaatta 116  Q
    |||||||||||||| || ||||||||| |||||  |||| || |||||||||    || ||||||||||||||| |||||||| ||||||||||||| ||    
T  30982809 atgaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacgacaccgacacttataattacactgaaata 30982908  T
Q  117 tgttattttttcaaattattag 138  Q
    ||| ||||| |||||| |||||    
T  30982909 tgtgattttctcaaatcattag 30982930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 86 - 153
Target Start/End: Original strand, 2361975 - 2362042
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtc 153  Q
    ||||| |||||||| |||||||||| |||||||| |||||||||||||||||| ||||| ||||||||    
T  2361975 cgacaccgacacttttaattacactaaattatgtaattttttcaaattattagctgtgtcggtgtgtc 2362042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 82 - 144
Target Start/End: Complemental strand, 12708210 - 12708147
Alignment:
Q  82 gacacgacatcgacacttgtaattacactgaattatgttatttttt-caaattattagttgtgt 144  Q
    |||||||||||||||||||||||||||||||||||| | |||||||  ||||||||||||||||    
T  12708210 gacacgacatcgacacttgtaattacactgaattatttcattttttaaaaattattagttgtgt 12708147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 80 - 138
Target Start/End: Original strand, 12895110 - 12895168
Alignment:
Q  80 ccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||||||||| ||||||||||||||||  |||||||||| ||||||||||||||||||    
T  12895110 ccgacacgacaccgacacttgtaattactttgaattatgtgattttttcaaattattag 12895168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 153
Target Start/End: Complemental strand, 28084640 - 28084513
Alignment:
Q  23 tgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgtta- 121  Q
    ||||||||||||| |||| ||||||| |||||  | || || |||||||||    |||||||||||||  |||||||||||||||| |||||||||| |     
T  28084640 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgt----caccgacacgacacagacacttgtaattacattgaattatgtgat 28084545  T
Q  122 ttttttcaaattattagttgtgtaggtgtgtc 153  Q
    |||||||||||| |||| ||||| || |||||    
T  28084544 ttttttcaaattcttagctgtgtcggcgtgtc 28084513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 29205497 - 29205451
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  29205497 cgacacttgtaattacactgaattatgtgattttttcaaattattag 29205451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 93 - 138
Target Start/End: Original strand, 28964255 - 28964300
Alignment:
Q  93 gacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  28964255 gacacttgtaattacactgaattatgtgattttttcaaattattag 28964300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 7377390 - 7377342
Alignment:
Q  124 ttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtcc 172  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||    
T  7377390 ttttcaaattattagttgtgtaggcgtgtccgtgtcgtgtctggtgtcc 7377342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 86 - 165
Target Start/End: Complemental strand, 42640588 - 42640506
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatg---ttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtcc 165  Q
    ||||| |||||||||||||||||||||||||||   || |||||||||||||| || ||||| || |||||||||| ||||||    
T  42640588 cgacaccgacacttgtaattacactgaattatgtgatttttttttcaaattatcagctgtgtcggcgtgtccgtgttgtgtcc 42640506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 86 - 140
Target Start/End: Original strand, 12797338 - 12797391
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagtt 140  Q
    ||||| |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  12797338 cgacaccgacacttgtaattacactgaattatgtga-tttttcaaattattagtt 12797391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 76 - 138
Target Start/End: Complemental strand, 47264055 - 47263993
Alignment:
Q  76 gacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    |||||| ||| |||||||||| |||||||||||| ||||||||| |||||| |||||||||||    
T  47264055 gacaccaacatgacatcgacatttgtaattacacagaattatgtgatttttacaaattattag 47263993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 138
Target Start/End: Complemental strand, 848027 - 847958
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||| ||||||| ||| |||| ||||||||||||||| | |||||||||| ||||| ||||||||||||    
T  848027 cgtgtccgacaccaacaagacaccgacacttgtaattatagtgaattatgtaattttctcaaattattag 847958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 6485617 - 6485662
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||    
T  6485617 cgacacttgtaattacactaaattatgtgattttttcaaattatta 6485662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 14465088 - 14465161
Alignment:
Q  99 tgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc-gtgtccggtgtc 171  Q
    |||||||||| |||||||||| |||||||||||||||||| |||||  | ||||| ||||| ||||||||||||    
T  14465088 tgtaattacattgaattatgtgattttttcaaattattaggtgtgttagagtgtcagtgtctgtgtccggtgtc 14465161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 40481687 - 40481623
Alignment:
Q  94 acacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||| | || ||||| |||||    
T  40481687 acacttgtaattacactgaattatgtga-tttttcaaattattagttgtatcggcgtgtcagtgtc 40481623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 76 - 159
Target Start/End: Original strand, 22234880 - 22234964
Alignment:
Q  76 gacaccgacacgacatcgacacttgtaattacactgaattatgtta-ttttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||||||||||||| |||||| |  |||||||||||||||||| | |||||||||||| ||||  |||| || |||||||||||    
T  22234880 gacaccgacacgacaccgacacatagaattacactgaattatgtgatttttttcaaatttttagcggtgtcggcgtgtccgtgtc 22234964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 159
Target Start/End: Original strand, 35157986 - 35158058
Alignment:
Q  87 gacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||| |||||||| |||||||||| |||||||| |||||| |||||||||||||| || || ||||| |||||    
T  35157986 gacaccgacacttataattacactaaattatgtgatttttccaaattattagttgcgtcggcgtgtcagtgtc 35158058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 37203315 - 37203271
Alignment:
Q  94 acacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||    
T  37203315 acacttgtaattacactaaattatgtcattttttcaaattattag 37203271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 153
Target Start/End: Original strand, 38847019 - 38847079
Alignment:
Q  93 gacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtc 153  Q
    |||||||||||||||||||||| || | |||||||||||||||||| ||||| || |||||    
T  38847019 gacacttgtaattacactgaataatatgattttttcaaattattagctgtgtcggagtgtc 38847079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 153
Target Start/End: Complemental strand, 49431085 - 49431017
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgtta-ttttttcaaattattagttgtgtaggtgtgtc 153  Q
    ||||| |||||||| ||||||||||||||||||| | ||||||||||||||||| ||||| || |||||    
T  49431085 cgacaccgacacttttaattacactgaattatgtgatttttttcaaattattagctgtgtcggcgtgtc 49431017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 715615 - 715674
Alignment:
Q  94 acacttgtaattacactgaattatgtta-ttttttcaaattattagttgtgtaggtgtgt 152  Q
    |||||||||||||||||||||||||| | |||||| |||||||||| ||||| |||||||    
T  715615 acacttgtaattacactgaattatgtgattttttttaaattattagctgtgtcggtgtgt 715674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 752941 - 753000
Alignment:
Q  94 acacttgtaattacactgaattatgtta-ttttttcaaattattagttgtgtaggtgtgt 152  Q
    |||||||||||||||||||||||||| | |||||| |||||||||| ||||| |||||||    
T  752941 acacttgtaattacactgaattatgtgattttttttaaattattagctgtgtcggtgtgt 753000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 86 - 172
Target Start/End: Complemental strand, 4157208 - 4157125
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtcc 172  Q
    ||||| |||||||||||||| |||| |||||||| | ||||||||||||||||||||||    ||||| |||||||||| |||||||    
T  4157208 cgacaccgacacttgtaattgcactaaattatgtga-tttttcaaattattagttgtgt--cagtgtctgtgtcgtgtctggtgtcc 4157125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 86 - 153
Target Start/End: Original strand, 12895274 - 12895341
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtc 153  Q
    ||||| |||||||| |||||||||  |||||||| ||||||||||||||||| |||||| || |||||    
T  12895274 cgacaccgacacttataattacacaaaattatgtgattttttcaaattattatttgtgtcggcgtgtc 12895341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 15029809 - 15029742
Alignment:
Q  101 taattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggt 168  Q
    ||||||||||||||||||| || |||||||||||||||  ||||  | ||||| ||||||||||||||    
T  15029809 taattacactgaattatgtgatattttcaaattattagcagtgtctgcgtgtcagtgtcgtgtccggt 15029742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 86 - 153
Target Start/End: Complemental strand, 16073453 - 16073387
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtc 153  Q
    ||||| |||||||||||||||||||||||||||  | ||||||||||||||| |||||| || |||||    
T  16073453 cgacaccgacacttgtaattacactgaattatgcga-tttttcaaattattacttgtgttggcgtgtc 16073387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 16303263 - 16303317
Alignment:
Q  83 acacgacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    |||||||| ||||||||||||||||||| |||||| | ||||||||||| |||||    
T  16303263 acacgacaccgacacttgtaattacactaaattatatcattttttcaaaatatta 16303317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 27706185 - 27706235
Alignment:
Q  94 acacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||||||||||||||| |||||||| ||||||| ||||||||| ||||||    
T  27706185 acacttgtaattacactaaattatgtgatttttttaaattattaattgtgt 27706235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 92 - 158
Target Start/End: Original strand, 31800484 - 31800550
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgt 158  Q
    ||||||||||||||||| | |||||| | ||||||| |||||||||| ||||| |||||||| ||||    
T  31800484 cgacacttgtaattacattaaattatttaattttttaaaattattagctgtgtcggtgtgtcggtgt 31800550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 101 - 159
Target Start/End: Complemental strand, 36635368 - 36635310
Alignment:
Q  101 taattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||||||||||||||||| ||||| ||||||||||||| |||| || ||||| |||||    
T  36635368 taattacactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtgtc 36635310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 137
Target Start/End: Complemental strand, 40742669 - 40742599
Alignment:
Q  67 cacgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    |||||||  |||||||||||||||||||||| | ||||||||||  ||||| | ||||| |||||||||||    
T  40742669 cacgtgtctgacaccgacacgacatcgacacatataattacactagattatatgattttctcaaattatta 40742599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 13134525 - 13134460
Alignment:
Q  70 gtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattat 135  Q
    |||||||||  ||||||||||||||||| | |||||||||| |||||||| ||||| | |||||||    
T  13134525 gtgttcgacgtcgacacgacatcgacacatataattacactaaattatgtgattttcttaaattat 13134460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 77 - 138
Target Start/End: Original strand, 38148716 - 38148777
Alignment:
Q  77 acaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||| |||||||||||||| ||  |||||||||||||||||| ||||| ||||| ||||||    
T  38148716 acaccaacacgacatcgacatttaaaattacactgaattatgtgattttctcaaactattag 38148777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 482184 - 482248
Alignment:
Q  21 aatgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgttcgacaccgaca 85  Q
    ||||||||| ||||| || | ||||||||||||||  ||| |||||||||||| |||||||||||    
T  482184 aatgaagcatggacactcatcggattagacgtgttcaggtgtcagacacgtgtccgacaccgaca 482248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 8423718 - 8423770
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||| ||||| || ||||||||||||||||||| ||||| ||||||||||||    
T  8423718 cgacaccgacatttataattacactgaattatgtgattttctcaaattattag 8423770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 24544035 - 24543967
Alignment:
Q  92 cgacacttgtaattacactgaattatgt-tattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||||||||||||||| || |||| || |||||||| |||||||||||||||| || ||||| |||||    
T  24544035 cgacacttgtaattacaatgcattaagtgtatttttttaaattattagttgtgtcggcgtgtcagtgtc 24543967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 166
Target Start/End: Complemental strand, 46160963 - 46160875
Alignment:
Q  78 caccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccg 166  Q
    ||||||||||||| |||||| | |||| |||||||||||||||||||| ||| ||| |||   | || || ||||| ||||||||||||    
T  46160963 caccgacacgacaccgacacatataataacactgaattatgttattttctcatatttttaacggcgtcggcgtgtctgtgtcgtgtccg 46160875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 137
Target Start/End: Complemental strand, 11931351 - 11931288
Alignment:
Q  74 tcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    |||| ||||||| ||||||||||| | || ||||||| |||||||| ||||||||| |||||||    
T  11931351 tcgataccgacatgacatcgacacatatatttacactaaattatgtgattttttcatattatta 11931288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 15835675 - 15835730
Alignment:
Q  122 ttttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtccttatc 177  Q
    ||||||||||||||||   |||| |||||||| |||||||||||||||||| ||||    
T  15835675 ttttttcaaattattaacagtgtcggtgtgtctgtgtcgtgtccggtgtccatatc 15835730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 138
Target Start/End: Complemental strand, 30838280 - 30838217
Alignment:
Q  75 cgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    |||||| ||||||||| ||| |||| |||||||||| |||||| | ||||| ||||||||||||    
T  30838280 cgacactgacacgacaccgatacttataattacactaaattatataattttatcaaattattag 30838217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 11651142 - 11651192
Alignment:
Q  94 acacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||||||| || ||||||||||||| ||||||| |||||||||| |||||    
T  11651142 acacttgtagttgcactgaattatgtgatttttttaaattattagctgtgt 11651192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 34306804 - 34306861
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||| |||||||||||||||||||  ||||| | ||||| ||||||||||||||||||    
T  34306804 cgacaccgacacttgtaattacactacattatctgatttt-tcaaattattagttgtgt 34306861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 75 - 164
Target Start/End: Original strand, 35723373 - 35723463
Alignment:
Q  75 cgacaccgacacgacatcgacacttgtaattacactgaattatgt-tattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtc 164  Q
    ||||||||| ||||||  ||||| | |||||||| |||||||||| |||||| ||||||||||||  |||| || ||||| ||||| ||||    
T  35723373 cgacaccgatacgacactgacacatataattacattgaattatgtgtattttctcaaattattagcggtgtcggcgtgtcagtgtcatgtc 35723463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 131
Target Start/End: Original strand, 6879465 - 6879510
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaa 131  Q
    ||||| ||||||||||||||||||| |||||||| |||||| ||||    
T  6879465 cgacaccgacacttgtaattacacttaattatgtgatttttccaaa 6879510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 19230315 - 19230360
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    |||||| | |||||||| |||||||||||||||| |||||||||||    
T  19230315 cgacacctataattacattgaattatgttattttctcaaattatta 19230360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 137
Target Start/End: Complemental strand, 24343560 - 24343515
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    |||||| | ||||||||||||||||||| ||||| |||||||||||    
T  24343560 cgacacctataattacactgaattatgtaattttctcaaattatta 24343515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 44796975 - 44797012
Alignment:
Q  99 tgtaattacactgaattatgttattttttcaaattatt 136  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  44796975 tgtaattacattgaattatgttattttctcaaattatt 44797012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 136
Target Start/End: Original strand, 46180953 - 46180986
Alignment:
Q  103 attacactgaattatgttattttttcaaattatt 136  Q
    ||||||||||||||||||||||| ||||||||||    
T  46180953 attacactgaattatgttattttctcaaattatt 46180986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 101 - 137
Target Start/End: Complemental strand, 903966 - 903930
Alignment:
Q  101 taattacactgaattatgttattttttcaaattatta 137  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  903966 taattacactgaattatgtgattttctcaaattatta 903930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 1074830 - 1074782
Alignment:
Q  113 attatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgt 161  Q
    ||||||| ||||| ||||||||||||| ||||  |||||||||||||||    
T  1074830 attatgtgattttctcaaattattagtggtgtcagtgtgtccgtgtcgt 1074782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 5775353 - 5775409
Alignment:
Q  81 cgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    ||||| |||| |||||| | |||||||||| |||||||| ||||| |||||||||||    
T  5775353 cgacatgacaccgacacatataattacacttaattatgtgattttctcaaattatta 5775409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 93 - 137
Target Start/End: Original strand, 14126118 - 14126162
Alignment:
Q  93 gacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    ||||||| ||||||||||||||||||| | ||| |||||||||||    
T  14126118 gacacttataattacactgaattatgtgactttatcaaattatta 14126162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 19312405 - 19312353
Alignment:
Q  75 cgacaccgacacgacatcgacacttgtaattacactgaattatgttatttttt 127  Q
    ||||| |||||||||| ||| |||| |||||||||||||| |||| |||||||    
T  19312405 cgacaacgacacgacaccgatacttataattacactgaatcatgtgatttttt 19312353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 20633535 - 20633492
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||||||||||||||| |||||||||   |||||||||||||||||    
T  20633535 cgacacttgtaattacattgaattatg---ttttttcaaattattag 20633492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 101 - 137
Target Start/End: Original strand, 22440615 - 22440651
Alignment:
Q  101 taattacactgaattatgttattttttcaaattatta 137  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  22440615 taattacactgaattatgtgattttctcaaattatta 22440651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 28000738 - 28000794
Alignment:
Q  82 gacacgacatcgacacttgtaattacactgaattatgttatt-ttttcaaattatta 137  Q
    |||| |||| |||||||||||||||||||||||||| | ||| |||| |||||||||    
T  28000738 gacatgacaccgacacttgtaattacactgaattatatgattattttaaaattatta 28000794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 31602989 - 31603067
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatg---ttattttttcaaattattagttgtgt 144  Q
    |||||| |||||||||||||| |||| || | | |||||| |||||||||   || |||||||||||||||||| ||||    
T  31602989 cgtgtttgacaccgacacgacttcgaaacatatgattacattgaattatgtgatttttttttcaaattattagtggtgt 31603067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 101 - 137
Target Start/End: Complemental strand, 32910595 - 32910559
Alignment:
Q  101 taattacactgaattatgttattttttcaaattatta 137  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  32910595 taattacactgaattatgtcattttctcaaattatta 32910559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 101 - 137
Target Start/End: Original strand, 40179651 - 40179687
Alignment:
Q  101 taattacactgaattatgttattttttcaaattatta 137  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  40179651 taattacactgaattatgtgattttttcaaactatta 40179687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 95 - 155
Target Start/End: Complemental strand, 14580 - 14520
Alignment:
Q  95 cacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccg 155  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||    
T  14580 cacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtccg 14520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 51862 - 51797
Alignment:
Q  94 acacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||| || ||||| |||||    
T  51862 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 51797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 17750 - 17807
Alignment:
Q  87 gacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    |||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgt 17807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 3832 - 3900
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    ||||| ||||||| ||||||||  ||||||||||||||||||||||||||| ||||||| |||||||||    
T  3832 cgtgtccgacaccaacacgacactgacacttgtaattacactgaattatgtgatttttttaaattatta 3900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 8618 - 8693
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||| ||| |||||||||||| ||||| ||||||||| || ||||||||| || |||||||||||||||||||||    
T  8618 cgtgtccgataccgacacgacaccgacatttgtaattataccgaattatgtgatattttcaaattattagttgtgt 8693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 21 - 159
Target Start/End: Complemental strand, 13524 - 13386
Alignment:
Q  21 aatgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgttcgacaccgacac-gacatcgacacttgtaattacactgaattatgt 119  Q
    ||||||||||||||| ||||||||||||  ||||    || |||||| ||||| ||   ||||||| |||| |||| ||||||||| |||||||||||||    
T  13524 aatgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgt-cgtgtccgacaccgacaccgacccttgtaattgcactgaattatgt 13426  T
Q  120 tattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
     ||||| |||||||||||||||||| || ||||| |||||    
T  13425 gattttctcaaattattagttgtgtcggcgtgtcagtgtc 13386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 21 - 159
Target Start/End: Original strand, 21803 - 21941
Alignment:
Q  21 aatgaagcacggacattccttggattagacgtgttgcggtatcagacacgtgttcgacaccgacac-gacatcgacacttgtaattacactgaattatgt 119  Q
    ||||||||||||||| ||||||||||||  ||||    || |||||| ||||| ||   ||||||| |||| |||| ||||||||| |||||||||||||    
T  21803 aatgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgt-cgtgtccgacaccgacaccgacccttgtaattgcactgaattatgt 21901  T
Q  120 tattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
     ||||| |||||||||||||||||| || ||||| |||||    
T  21902 gattttctcaaattattagttgtgtcggcgtgtcagtgtc 21941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 86 - 137
Target Start/End: Complemental strand, 70337 - 70286
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  70337 cgacaccgacacttataattacactgaattatgttattttttcaaattatta 70286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 27 - 170
Target Start/End: Complemental strand, 53303 - 53153
Alignment:
Q  27 gcacggacattccttggattagacgtgttgcggtatcagacacgtgtt-----cgacaccgacacgacatcgacacttgtaattacactgaattatgtta 121  Q
    ||||||||| | ||||||||| ||||||  |||| || |||||||||      ||||||||||||| || |||||||| ||||||||||||||||||| |    
T  53303 gcacggacacttcttggattaaacgtgtcccggtgtcggacacgtgtcatgtccgacaccgacacggcaccgacacttataattacactgaattatgtga 53204  T
Q  122 ttttttcaaattattagttgtgtaggtgtgtc--cgtgtcgtgtccggtgt 170  Q
    |||| |||||||||| |  || | || |||||  |||||||||||||||||    
T  53203 ttttctcaaattattggcggtatcggcgtgtcagcgtgtcgtgtccggtgt 53153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 44; Significance: 9e-16; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 93 - 159
Target Start/End: Original strand, 178825 - 178892
Alignment:
Q  93 gacacttgtaattacactgaattatgtt-attttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||| || ||||| |||||    
T  178825 gacacttgtaattacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtc 178892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 137
Target Start/End: Original strand, 192256 - 192300
Alignment:
Q  93 gacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    ||||||||||||||||| ||||||||| ||||| |||||||||||    
T  192256 gacacttgtaattacaccgaattatgtaattttctcaaattatta 192300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 241670 - 241580
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| ||||||| |||||||| |||||||  |||||||||| |||||||| |||||| ||||||||||| ||||| || ||||| |||||    
T  241670 cgtgtccgacaccaacacgacaccgacactcataattacactaaattatgtgatttttccaaattattagctgtgtcggcgtgtcagtgtc 241580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 462 - 514
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||| |||||||||||||||||||||||| ||| ||||||||||||||||||    
T  462 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattattag 514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 86 - 166
Target Start/End: Complemental strand, 8068 - 7989
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccg 166  Q
    ||||| |||||||| ||||||||||| ||||| | |||||||||||||||||||||||| || ||||| || |||||||||    
T  8068 cgacaccgacactt-taattacactgtattatatgattttttcaaattattagttgtgtcggcgtgtctgtatcgtgtccg 7989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 137
Target Start/End: Complemental strand, 46741 - 46690
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattatta 137  Q
    ||||| ||||| |||||||||||||||||||||| |||||||||||||||||    
T  46741 cgacaccgacatttgtaattacactgaattatgtgattttttcaaattatta 46690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 23832 - 23777
Alignment:
Q  83 acacgacatcgacacttgtaattacactgaattatgtta-ttttttcaaattatta 137  Q
    |||||||| |||||||||||||||||||||||||||| | ||||||||||||||||    
T  23832 acacgacaccgacacttgtaattacactgaattatgtgatttttttcaaattatta 23777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 22 - 139
Target Start/End: Original strand, 9678 - 9800
Alignment:
Q  22 atgaagcacggacattccttggattagacgtgttgcggtatcagaca-----cgtgttcgacaccgacacgacatcgacacttgtaattacactgaatta 116  Q
    |||||||||||||| |||| |||||| ||||||  || | |||||||     |||||  |||||| |||||||| |||||| | ||||||||||||||||    
T  9678 atgaagcacggacactcctcggattatacgtgtcccgatgtcagacaagtgtcgtgtctgacaccaacacgacaccgacacatataattacactgaatta 9777  T
Q  117 tgttattttttcaaattattagt 139  Q
     || ||||| |||||||||||||    
T  9778 agtgattttctcaaattattagt 9800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 92 - 172
Target Start/End: Complemental strand, 130535 - 130449
Alignment:
Q  92 cgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtagg--tg----tgtccgtgtcgtgtccggtgtcc 172  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||  ||||| ||  ||    |||||||||||||||||||||||    
T  130535 cgacacttgtaattacactgaattatgtgattttttcaaactattaactgtgtcggcttgtcattgtccgtgtcgtgtccggtgtcc 130449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 76 - 138
Target Start/End: Original strand, 263362 - 263424
Alignment:
Q  76 gacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    |||||||||||||||  ||||||| |||||||||||||||||||  |||| ||||||||||||    
T  263362 gacaccgacacgacactgacacttataattacactgaattatgtggttttctcaaattattag 263424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 93 - 159
Target Start/End: Complemental strand, 92859 - 92793
Alignment:
Q  93 gacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||  |||| || ||||| |||||    
T  92859 gacacttgtaattacactgaattatgtaattttctcaaattattagcggtgtcggcgtgtcagtgtc 92793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 123686 - 123607
Alignment:
Q  87 gacatcgacacttgtaattacactgaattatg---ttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgt 163  Q
    |||| |||||||||||||||||||||||||||   || |||||| |||||||||| ||||| || ||||| |||| ||||    
T  123686 gacaccgacacttgtaattacactgaattatgtgattctttttttaaattattagctgtgttggcgtgtcagtgtagtgt 123607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 83220 - 83172
Alignment:
Q  85 acgacatcgacacttgtaattacactgaattatgttattttttcaaatt 133  Q
    |||||| ||||| |||||||||||||||||||||| ||||||| |||||    
T  83220 acgacaccgacatttgtaattacactgaattatgtcatttttttaaatt 83172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 19626 - 19562
Alignment:
Q  94 acacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||| | || ||||| |||||    
T  19626 acacttgtaattacactgaattatgtga-tttttcaaattattagttgtatcggcgtgtcagtgtc 19562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 155
Target Start/End: Original strand, 7319 - 7380
Alignment:
Q  94 acacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccg 155  Q
    |||||| |||||||||| |||||||| |||||| ||||||||||||||||| || |||||||    
T  7319 acacttataattacactaaattatgtgatttttccaaattattagttgtgtcggcgtgtccg 7380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 159
Target Start/End: Complemental strand, 8857 - 8784
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||| ||||||||||||||||||| ||| || | |||||||||||||||||| ||||| || ||||| |||||    
T  8857 cgacaccgacacttgtaattacactaaataatatgattttttcaaattattagctgtgtcggcgtgtcagtgtc 8784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 153
Target Start/End: Complemental strand, 1103 - 1027
Alignment:
Q  77 acaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtc 153  Q
    |||||||||| |||  ||||| | || |||||||||||||||| ||||||||||||||||||  |||| ||||||||    
T  1103 acaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgtc 1027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 4891 - 4950
Alignment:
Q  94 acacttgtaattacactgaattatgtta-ttttttcaaattattagttgtgtaggtgtgt 152  Q
    |||||||||||||||||||||||||| | |||||| |||||||||| ||||| |||||||    
T  4891 acacttgtaattacactgaattatgtgattttttttaaattattagctgtgtcggtgtgt 4950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 80 - 127
Target Start/End: Complemental strand, 23485 - 23438
Alignment:
Q  80 ccgacacgacatcgacacttgtaattacactgaattatgttatttttt 127  Q
    ||||||||||| |||||||| ||||||||||||||||||| |||||||    
T  23485 ccgacacgacaccgacacttataattacactgaattatgtgatttttt 23438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 23587 - 23529
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttatttttt 127  Q
    ||||| ||||||||| ||||||  ||||||| ||||||||||||||||||| |||||||    
T  23587 cgtgtccgacaccgaaacgacactgacacttataattacactgaattatgtgatttttt 23529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 87 - 138
Target Start/End: Complemental strand, 63831 - 63780
Alignment:
Q  87 gacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    |||| |||||||||||||| ||||||||||||| ||||| ||||||||||||    
T  63831 gacaccgacacttgtaattgcactgaattatgtaattttctcaaattattag 63780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 135
Target Start/End: Complemental strand, 56989 - 56932
Alignment:
Q  78 caccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattat 135  Q
    |||||||||||||  ||||||| | ||||||||||||||| | ||||| |||||||||    
T  56989 caccgacacgacactgacacttatgattacactgaattatatcattttctcaaattat 56932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 7040 - 7090
Alignment:
Q  94 acacttgtaattacactgaattatgttattttttcaaattattagttgtgt 144  Q
    ||||||||||||| ||| |||||||| |||||||||||||||||| |||||    
T  7040 acacttgtaattatactaaattatgtaattttttcaaattattagctgtgt 7090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 171
Target Start/End: Original strand, 44516 - 44610
Alignment:
Q  77 acaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtcgtgtccggtgtc 171  Q
    |||||||||||| | |||||| | ||||||||||||||||||| ||||| ||||||| ||||  ||||  |  ||||| ||||||||| ||||||    
T  44516 acaccgacacgataccgacacatataattacactgaattatgtgattttctcaaatttttagcggtgtcagcttgtccctgtcgtgtctggtgtc 44610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 82 - 152
Target Start/End: Original strand, 135308 - 135378
Alignment:
Q  82 gacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgt 152  Q
    ||||||||| |||||| | ||||||||| ||||||||| ||||| ||||||||||||  |||| |||||||    
T  135308 gacacgacaccgacacatataattacacagaattatgtgattttctcaaattattagcagtgtcggtgtgt 135378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 90901 - 90829
Alignment:
Q  87 gacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgtccgtgtc 159  Q
    ||||||||||  | ||||||||||||||||| | ||||| ||||||||||| | |||| |||||||| |||||    
T  90901 gacatcgacatatataattacactgaattatatgattttctcaaattattaatggtgttggtgtgtcagtgtc 90829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 70 - 152
Target Start/End: Complemental strand, 24099 - 24018
Alignment:
Q  70 gtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattagttgtgtaggtgtgt 152  Q
    |||| ||||||||||||||||  || ||| ||||||||||| |||||||  ||||||  |||||||||| ||||| |||||||    
T  24099 gtgtccgacaccgacacgacactgaaact-gtaattacactaaattatgagatttttgaaaattattagctgtgtcggtgtgt 24018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 138
Target Start/End: Complemental strand, 6380 - 6319
Alignment:
Q  77 acaccgacacgacatcgacacttgtaattacactgaattatgttattttttcaaattattag 138  Q
    ||||||| |||||| |||||| | |||||||| |||||||||  ||||| ||||||||||||    
T  6380 acaccgatacgacaccgacacatataattacattgaattatgcaattttgtcaaattattag 6319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 127
Target Start/End: Complemental strand, 3052 - 2946
Alignment:
Q  26 agcacggacattccttggattagacgtgttgcggtatcagacacgtgt----tc-gacaccgacacgacatcgacacttgtaattacactgaattatgtt 120  Q
    |||||||||| |||| ||||||| |||||| |||| ||  ||||||||    || || ||||||||||||  || ||||||||||||||| ||||||||     
T  3052 agcacggacactcctcggattaggcgtgttccggtgtcgaacacgtgtcgtgtctgataccgacacgacactgatacttgtaattacactaaattatgtg 2953  T
Q  121 atttttt 127  Q
    |||||||    
T  2952 atttttt 2946  T

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Target: scaffold0083 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 119
Target Start/End: Original strand, 45530 - 45563
Alignment:
Q  86 cgacatcgacacttgtaattacactgaattatgt 119  Q
    ||||| ||||||||||||||||||||||||||||    
T  45530 cgacaccgacacttgtaattacactgaattatgt 45563  T

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Target: scaffold0623 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 5979 - 6035
Alignment:
Q  69 cgtgttcgacaccgacacgacatcgacacttgtaattacactgaattatgttatttt 125  Q
    ||||||||||||||| |||||| |||||| | ||||||||||| ||| ||| |||||    
T  5979 cgtgttcgacaccgatacgacaccgacacatataattacactgcattttgtgatttt 6035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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