View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4744-Insertion-9 (Length: 330)

Name: NF4744-Insertion-9
Description: NF4744
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4744-Insertion-9
NF4744-Insertion-9
[»] chr3 (46 HSPs)
chr3 (38-330)||(47578528-47578819)
chr3 (6-38)||(5560184-5560216)
chr3 (6-38)||(22399095-22399127)
chr3 (6-38)||(24100281-24100313)
chr3 (6-38)||(29625979-29626011)
chr3 (6-38)||(32234549-32234581)
chr3 (6-38)||(37313397-37313429)
chr3 (6-38)||(40131111-40131143)
chr3 (6-38)||(41464350-41464382)
chr3 (6-38)||(42291840-42291872)
chr3 (6-38)||(43125829-43125861)
chr3 (6-38)||(49330035-49330067)
chr3 (6-38)||(51102530-51102562)
chr3 (6-37)||(2665999-2666030)
chr3 (6-37)||(7755458-7755489)
chr3 (6-37)||(39053393-39053424)
chr3 (6-37)||(44806683-44806714)
chr3 (6-37)||(47257792-47257823)
chr3 (6-37)||(53943739-53943770)
chr3 (6-36)||(27067130-27067160)
chr3 (7-37)||(36368938-36368968)
chr3 (6-36)||(51452902-51452932)
chr3 (7-37)||(51942558-51942588)
chr3 (6-36)||(53637841-53637871)
chr3 (6-35)||(40804662-40804691)
chr3 (6-38)||(2228076-2228108)
chr3 (6-38)||(7855266-7855298)
chr3 (6-38)||(21597289-21597321)
chr3 (9-37)||(24376572-24376600)
chr3 (6-38)||(25353552-25353584)
chr3 (6-38)||(25641644-25641676)
chr3 (6-38)||(28048544-28048576)
chr3 (9-37)||(33550581-33550609)
chr3 (6-38)||(34279862-34279894)
chr3 (9-37)||(40419834-40419862)
chr3 (6-34)||(41293470-41293498)
chr3 (6-38)||(41732526-41732558)
chr3 (6-38)||(43612199-43612231)
chr3 (6-38)||(48546981-48547013)
chr3 (6-38)||(51170185-51170217)
chr3 (6-38)||(51224178-51224210)
chr3 (6-38)||(51415967-51415999)
chr3 (6-38)||(52638840-52638872)
chr3 (6-38)||(54159140-54159172)
chr3 (6-38)||(54707361-54707393)
chr3 (6-38)||(55453396-55453428)
[»] chr4 (44 HSPs)
chr4 (6-40)||(14017526-14017560)
chr4 (5-38)||(3170624-3170657)
chr4 (6-39)||(17555638-17555671)
chr4 (6-38)||(23437590-23437622)
chr4 (6-38)||(29478358-29478390)
chr4 (6-38)||(39077543-39077575)
chr4 (6-38)||(41632158-41632190)
chr4 (6-38)||(41702611-41702643)
chr4 (6-38)||(47344654-47344686)
chr4 (6-38)||(49881215-49881247)
chr4 (6-38)||(50233998-50234030)
chr4 (6-38)||(51363005-51363037)
chr4 (6-38)||(54805770-54805802)
chr4 (6-37)||(407753-407784)
chr4 (6-37)||(2243457-2243488)
chr4 (6-37)||(29777409-29777440)
chr4 (6-37)||(31070225-31070256)
chr4 (6-37)||(41949381-41949412)
chr4 (6-37)||(42765993-42766024)
chr4 (6-37)||(43471847-43471878)
chr4 (6-37)||(48313556-48313587)
chr4 (6-37)||(50457962-50457993)
chr4 (6-37)||(53854581-53854612)
chr4 (6-37)||(55056411-55056442)
chr4 (6-36)||(146581-146611)
chr4 (6-36)||(18462165-18462195)
chr4 (6-39)||(237474-237507)
chr4 (6-35)||(6019929-6019958)
chr4 (6-35)||(22468922-22468951)
chr4 (6-35)||(22618664-22618693)
chr4 (9-38)||(31532290-31532319)
chr4 (6-35)||(42222292-42222321)
chr4 (6-35)||(42557583-42557612)
chr4 (6-38)||(2826833-2826865)
chr4 (6-38)||(11972270-11972302)
chr4 (6-34)||(21366761-21366789)
chr4 (6-38)||(32366812-32366844)
chr4 (6-38)||(34835175-34835207)
chr4 (6-38)||(37239231-37239263)
chr4 (9-37)||(39587934-39587962)
chr4 (6-38)||(42033173-42033205)
chr4 (6-38)||(42085205-42085237)
chr4 (6-38)||(47662254-47662286)
chr4 (6-38)||(54216311-54216343)
[»] chr7 (33 HSPs)
chr7 (6-39)||(33839867-33839900)
chr7 (6-38)||(19563446-19563478)
chr7 (6-38)||(22979799-22979831)
chr7 (6-38)||(27018115-27018147)
chr7 (6-38)||(33332788-33332820)
chr7 (6-38)||(33695973-33696005)
chr7 (6-38)||(42272150-42272182)
chr7 (6-38)||(45063507-45063539)
chr7 (6-38)||(45482657-45482689)
chr7 (6-38)||(46913108-46913140)
chr7 (6-38)||(47740483-47740515)
chr7 (6-38)||(48609829-48609861)
chr7 (6-37)||(10028488-10028519)
chr7 (6-37)||(31586848-31586879)
chr7 (6-37)||(35767481-35767512)
chr7 (6-37)||(40670563-40670594)
chr7 (6-40)||(36816986-36817020)
chr7 (6-35)||(20165966-20165995)
chr7 (9-38)||(33423430-33423459)
chr7 (6-35)||(49171514-49171543)
chr7 (6-38)||(2341814-2341846)
chr7 (6-34)||(15877553-15877581)
chr7 (6-38)||(16482924-16482956)
chr7 (6-38)||(17855427-17855459)
chr7 (6-38)||(24228540-24228572)
chr7 (6-38)||(25037649-25037681)
chr7 (6-38)||(25894069-25894101)
chr7 (6-38)||(32556747-32556779)
chr7 (6-38)||(33411259-33411291)
chr7 (6-38)||(33720188-33720220)
chr7 (6-38)||(35355887-35355919)
chr7 (6-38)||(44659843-44659875)
chr7 (6-38)||(46817562-46817594)
[»] chr6 (21 HSPs)
chr6 (6-43)||(8615233-8615270)
chr6 (6-38)||(599890-599922)
chr6 (6-38)||(929657-929689)
chr6 (6-38)||(1970709-1970741)
chr6 (6-38)||(16703364-16703396)
chr6 (6-38)||(19415685-19415717)
chr6 (6-38)||(22551213-22551245)
chr6 (6-38)||(28947085-28947117)
chr6 (6-37)||(5882505-5882536)
chr6 (6-37)||(19281207-19281238)
chr6 (6-37)||(24168090-24168121)
chr6 (6-37)||(30467755-30467786)
chr6 (6-36)||(960056-960086)
chr6 (6-35)||(2892189-2892218)
chr6 (6-35)||(30743600-30743629)
chr6 (6-38)||(7167580-7167612)
chr6 (6-38)||(7393738-7393770)
chr6 (6-38)||(11743096-11743128)
chr6 (6-38)||(13329379-13329411)
chr6 (6-38)||(14891531-14891563)
chr6 (6-38)||(28948986-28949018)
[»] chr2 (30 HSPs)
chr2 (6-43)||(13815370-13815407)
chr2 (6-38)||(6594610-6594642)
chr2 (6-38)||(10424592-10424624)
chr2 (6-38)||(12814611-12814643)
chr2 (6-38)||(26710342-26710374)
chr2 (6-38)||(27400400-27400432)
chr2 (6-38)||(28019973-28020005)
chr2 (6-38)||(32608377-32608409)
chr2 (6-38)||(40735461-40735493)
chr2 (6-37)||(746464-746495)
chr2 (6-37)||(2325041-2325072)
chr2 (6-37)||(4034590-4034621)
chr2 (6-37)||(27024413-27024444)
chr2 (6-37)||(27651186-27651217)
chr2 (6-37)||(45370988-45371019)
chr2 (6-36)||(5726128-5726158)
chr2 (6-36)||(7892840-7892870)
chr2 (7-37)||(11184970-11185000)
chr2 (8-38)||(37255486-37255516)
chr2 (6-36)||(38997100-38997130)
chr2 (6-35)||(32327361-32327390)
chr2 (6-39)||(37621022-37621055)
chr2 (6-38)||(2000478-2000510)
chr2 (6-38)||(2688870-2688902)
chr2 (6-38)||(8433068-8433100)
chr2 (6-38)||(12333636-12333668)
chr2 (6-38)||(15925077-15925109)
chr2 (6-38)||(17600833-17600865)
chr2 (6-34)||(23901780-23901808)
chr2 (6-38)||(40544217-40544249)
[»] chr8 (25 HSPs)
chr8 (6-38)||(5946045-5946077)
chr8 (6-38)||(22878389-22878421)
chr8 (6-38)||(25248037-25248069)
chr8 (6-38)||(32984229-32984261)
chr8 (6-38)||(37419938-37419970)
chr8 (6-38)||(41653893-41653925)
chr8 (6-38)||(41862218-41862250)
chr8 (6-38)||(45236717-45236749)
chr8 (6-37)||(6365985-6366016)
chr8 (6-37)||(12032951-12032982)
chr8 (6-37)||(37301477-37301508)
chr8 (6-37)||(37956420-37956451)
chr8 (6-37)||(43328706-43328737)
chr8 (6-36)||(2275913-2275943)
chr8 (6-36)||(9734255-9734285)
chr8 (6-36)||(40435305-40435335)
chr8 (6-35)||(2714550-2714579)
chr8 (7-36)||(9013684-9013713)
chr8 (6-35)||(17718874-17718903)
chr8 (6-35)||(31831107-31831136)
chr8 (6-38)||(2379138-2379170)
chr8 (6-38)||(27243280-27243312)
chr8 (6-38)||(27254855-27254887)
chr8 (6-38)||(29048555-29048587)
chr8 (6-38)||(31149031-31149063)
[»] chr5 (24 HSPs)
chr5 (6-38)||(739856-739888)
chr5 (6-38)||(3466833-3466865)
chr5 (6-38)||(5137713-5137745)
chr5 (6-38)||(12558170-12558202)
chr5 (6-38)||(24253380-24253412)
chr5 (6-38)||(25831519-25831551)
chr5 (6-38)||(43326531-43326563)
chr5 (6-37)||(5184971-5185002)
chr5 (6-37)||(27278629-27278660)
chr5 (6-37)||(40886179-40886210)
chr5 (6-39)||(1402646-1402679)
chr5 (6-35)||(15398634-15398663)
chr5 (6-35)||(18479820-18479849)
chr5 (6-39)||(42247923-42247956)
chr5 (6-38)||(890904-890936)
chr5 (6-38)||(4149692-4149724)
chr5 (6-38)||(6901797-6901829)
chr5 (6-38)||(7722047-7722079)
chr5 (6-38)||(13957668-13957700)
chr5 (6-38)||(27501207-27501239)
chr5 (6-38)||(27503377-27503409)
chr5 (6-38)||(36472425-36472457)
chr5 (6-38)||(38638051-38638083)
chr5 (6-38)||(43262335-43262367)
[»] chr1 (42 HSPs)
chr1 (6-38)||(2556998-2557030)
chr1 (6-38)||(3285400-3285432)
chr1 (6-38)||(6327699-6327731)
chr1 (6-38)||(23984753-23984785)
chr1 (6-38)||(23994846-23994878)
chr1 (6-38)||(24245177-24245209)
chr1 (6-38)||(25058686-25058718)
chr1 (6-38)||(26277175-26277207)
chr1 (6-38)||(27983739-27983771)
chr1 (6-38)||(31307999-31308031)
chr1 (6-38)||(33112969-33113001)
chr1 (6-38)||(35692816-35692848)
chr1 (6-38)||(38332011-38332043)
chr1 (6-38)||(44661968-44662000)
chr1 (6-38)||(45538151-45538183)
chr1 (6-38)||(46616547-46616579)
chr1 (6-38)||(47671584-47671616)
chr1 (6-38)||(48373502-48373534)
chr1 (6-37)||(4156217-4156248)
chr1 (6-37)||(5980067-5980098)
chr1 (6-37)||(5981169-5981200)
chr1 (6-37)||(17995103-17995134)
chr1 (6-37)||(23221081-23221112)
chr1 (6-37)||(24885500-24885531)
chr1 (6-37)||(31040708-31040739)
chr1 (6-37)||(46967193-46967224)
chr1 (6-37)||(49254127-49254158)
chr1 (6-36)||(26525041-26525071)
chr1 (7-37)||(49399141-49399171)
chr1 (6-36)||(51403159-51403189)
chr1 (6-38)||(3611134-3611166)
chr1 (6-38)||(24649863-24649895)
chr1 (6-38)||(26472320-26472352)
chr1 (6-38)||(29770668-29770700)
chr1 (6-38)||(31844374-31844406)
chr1 (6-34)||(31980087-31980115)
chr1 (7-35)||(38790350-38790378)
chr1 (6-38)||(41999813-41999845)
chr1 (6-38)||(42234838-42234870)
chr1 (6-34)||(43251713-43251741)
chr1 (7-35)||(47772306-47772334)
chr1 (6-38)||(51057069-51057101)
[»] scaffold0155 (1 HSPs)
scaffold0155 (6-37)||(2584-2615)
[»] scaffold0100 (1 HSPs)
scaffold0100 (6-37)||(32560-32591)
[»] scaffold0092 (1 HSPs)
scaffold0092 (6-37)||(39708-39739)
[»] scaffold0076 (1 HSPs)
scaffold0076 (6-37)||(13914-13945)
[»] scaffold0035 (1 HSPs)
scaffold0035 (6-37)||(75396-75427)
[»] scaffold0394 (1 HSPs)
scaffold0394 (6-35)||(3089-3118)
[»] scaffold2003 (1 HSPs)
scaffold2003 (6-38)||(100-132)


Alignment Details
Target: chr3 (Bit Score: 269; Significance: 1e-150; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 38 - 330
Target Start/End: Original strand, 47578528 - 47578819
Alignment:
Q  38 tctataacaacttataaaatggataaaacattttagaatgaattgtttccgttgatcctttattggctaaggcaatgggagttaggttggtgcctgaaat 137  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47578528 tctataacaacatataaaatggatacaacattttagaatgaattgtttccgttgatcctttattggctaaggcaatgggagttaggttggtgcctgaaat 47578627  T
Q  138 tgcaaatcaaaagtatgaaatggtgttatgtttcatgcataattacaaaagtcctcttttttcaagttttcaaaaaagaatatttccataatcaatgcac 237  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47578628 tgcaaaacaaaagtatgaaatggtgttatgtttcatgcataattacaaaagtcctcttttttcaagttttcaaaaaagaatatttccataatcaatgcac 47578727  T
Q  238 gtatggtctttaatttctataacagtaactgaagaaacccaagtaaatggaattacttgctcattatggcattgtaattttgcaatgatttaa 330  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  47578728 gtatggtctttaatttctataacagtaactgaagaaaccaaagtaaatggaattacttgctcattatggcattgtaa-tttgcaatgatttaa 47578819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 5560184 - 5560216
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  5560184 caccattcttcaaaggtaatctagaaaaaacct 5560216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 22399127 - 22399095
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  22399127 caccattcttcaaaggtaatctagaaaaaacct 22399095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 24100313 - 24100281
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  24100313 caccattcttcaaaggtaatctagaaaaaacct 24100281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 29625979 - 29626011
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  29625979 caccattcttcaaaggtaatctagaaaaaacct 29626011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 32234549 - 32234581
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  32234549 caccattcttcaaaggtaatctagaaaaaacct 32234581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 37313429 - 37313397
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  37313429 caccattcttcaaaggtaatctagaaaaaacct 37313397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 40131111 - 40131143
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  40131111 caccattcttcaaaggtaatctagaaaaaacct 40131143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 41464382 - 41464350
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  41464382 caccattcttcaaaggtaatctagaaaaaacct 41464350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 42291872 - 42291840
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  42291872 caccattcttcaaaggtaatctagaaaaaacct 42291840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 43125861 - 43125829
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  43125861 caccattcttcaaaggtaatctagaaaaaacct 43125829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 49330067 - 49330035
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  49330067 caccattcttcaaaggtaatctagaaaaaacct 49330035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 51102530 - 51102562
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  51102530 caccattcttcaaaggtaatctagaaaaaacct 51102562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 2666030 - 2665999
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  2666030 caccattcttcaaaggtaatctagaaaaaacc 2665999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 7755458 - 7755489
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  7755458 caccattcttcaaaggtaatctagaaaaaacc 7755489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 39053424 - 39053393
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  39053424 caccattcttcaaaggtaatctagaaaaaacc 39053393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 44806714 - 44806683
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  44806714 caccattcttcaaaggtaatctagaaaaaacc 44806683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 47257823 - 47257792
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  47257823 caccattcttcaaaggtaatctagaaaaaacc 47257792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 53943739 - 53943770
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  53943739 caccattcttcaaaggtaatctagaaaaaacc 53943770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 36
Target Start/End: Original strand, 27067130 - 27067160
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaac 36  Q
    |||||||||||||||||||||||||||||||    
T  27067130 caccattcttcaaaggtaatctagaaaaaac 27067160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 37
Target Start/End: Complemental strand, 36368968 - 36368938
Alignment:
Q  7 accattcttcaaaggtaatctagaaaaaacc 37  Q
    |||||||||||||||||||||||||||||||    
T  36368968 accattcttcaaaggtaatctagaaaaaacc 36368938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 36
Target Start/End: Original strand, 51452902 - 51452932
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaac 36  Q
    |||||||||||||||||||||||||||||||    
T  51452902 caccattcttcaaaggtaatctagaaaaaac 51452932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 37
Target Start/End: Original strand, 51942558 - 51942588
Alignment:
Q  7 accattcttcaaaggtaatctagaaaaaacc 37  Q
    |||||||||||||||||||||||||||||||    
T  51942558 accattcttcaaaggtaatctagaaaaaacc 51942588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 36
Target Start/End: Complemental strand, 53637871 - 53637841
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaac 36  Q
    |||||||||||||||||||||||||||||||    
T  53637871 caccattcttcaaaggtaatctagaaaaaac 53637841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 35
Target Start/End: Original strand, 40804662 - 40804691
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaa 35  Q
    ||||||||||||||||||||||||||||||    
T  40804662 caccattcttcaaaggtaatctagaaaaaa 40804691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 2228076 - 2228108
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    ||||||| |||||||||||||||||||||||||    
T  2228076 caccatttttcaaaggtaatctagaaaaaacct 2228108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 7855266 - 7855298
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||| ||||||||||||||||||    
T  7855266 caccattcttcaaaagtaatctagaaaaaacct 7855298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 21597289 - 21597321
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    ||||||| |||||||||||||||||||||||||    
T  21597289 caccatttttcaaaggtaatctagaaaaaacct 21597321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 37
Target Start/End: Complemental strand, 24376600 - 24376572
Alignment:
Q  9 cattcttcaaaggtaatctagaaaaaacc 37  Q
    |||||||||||||||||||||||||||||    
T  24376600 cattcttcaaaggtaatctagaaaaaacc 24376572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 25353584 - 25353552
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    ||||||| |||||||||||||||||||||||||    
T  25353584 caccatttttcaaaggtaatctagaaaaaacct 25353552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 25641676 - 25641644
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||| ||||||||||||    
T  25641676 caccattcttcaaaggtaatttagaaaaaacct 25641644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 28048544 - 28048576
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||| ||||||||||||    
T  28048544 caccattcttcaaaggtaatttagaaaaaacct 28048576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 37
Target Start/End: Original strand, 33550581 - 33550609
Alignment:
Q  9 cattcttcaaaggtaatctagaaaaaacc 37  Q
    |||||||||||||||||||||||||||||    
T  33550581 cattcttcaaaggtaatctagaaaaaacc 33550609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 34279862 - 34279894
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||| ||||||||||||    
T  34279862 caccattcttcaaaggtaatttagaaaaaacct 34279894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 37
Target Start/End: Complemental strand, 40419862 - 40419834
Alignment:
Q  9 cattcttcaaaggtaatctagaaaaaacc 37  Q
    |||||||||||||||||||||||||||||    
T  40419862 cattcttcaaaggtaatctagaaaaaacc 40419834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 34
Target Start/End: Original strand, 41293470 - 41293498
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaa 34  Q
    |||||||||||||||||||||||||||||    
T  41293470 caccattcttcaaaggtaatctagaaaaa 41293498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 41732558 - 41732526
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    ||||||| |||||||||||||||||||||||||    
T  41732558 caccatttttcaaaggtaatctagaaaaaacct 41732526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 43612199 - 43612231
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||| ||||||||||||||||||    
T  43612199 caccattcttcaaatgtaatctagaaaaaacct 43612231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 48546981 - 48547013
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    ||||||||||||||| |||||||||||||||||    
T  48546981 caccattcttcaaagataatctagaaaaaacct 48547013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 51170185 - 51170217
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    ||||||||||||||||||||||| |||||||||    
T  51170185 caccattcttcaaaggtaatctaaaaaaaacct 51170217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 51224178 - 51224210
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||| ||||||||||||    
T  51224178 caccattcttcaaaggtaatttagaaaaaacct 51224210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 51415999 - 51415967
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||| ||||||||||||    
T  51415999 caccattcttcaaaggtaatttagaaaaaacct 51415967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 52638872 - 52638840
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||| ||||||||||||||||||||||    
T  52638872 caccattctttaaaggtaatctagaaaaaacct 52638840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 54159140 - 54159172
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||| ||||||||||||||||||    
T  54159140 caccattcttcaaaagtaatctagaaaaaacct 54159172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 54707361 - 54707393
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||| ||||||||||||    
T  54707361 caccattcttcaaaggtaatttagaaaaaacct 54707393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 55453396 - 55453428
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    ||||||||||||||||||| |||||||||||||    
T  55453396 caccattcttcaaaggtaacctagaaaaaacct 55453428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.0000000001; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 40
Target Start/End: Original strand, 14017526 - 14017560
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacctct 40  Q
    |||||||||||||||||||||||||||||||||||    
T  14017526 caccattcttcaaaggtaatctagaaaaaacctct 14017560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 3170657 - 3170624
Alignment:
Q  5 acaccattcttcaaaggtaatctagaaaaaacct 38  Q
    ||||||||||||||||||||||||||||||||||    
T  3170657 acaccattcttcaaaggtaatctagaaaaaacct 3170624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 17555638 - 17555671
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacctc 39  Q
    ||||||||||||||||||||||||||||||||||    
T  17555638 caccattcttcaaaggtaatctagaaaaaacctc 17555671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 23437622 - 23437590
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  23437622 caccattcttcaaaggtaatctagaaaaaacct 23437590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 29478390 - 29478358
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  29478390 caccattcttcaaaggtaatctagaaaaaacct 29478358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 39077575 - 39077543
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  39077575 caccattcttcaaaggtaatctagaaaaaacct 39077543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 41632158 - 41632190
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  41632158 caccattcttcaaaggtaatctagaaaaaacct 41632190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 41702611 - 41702643
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  41702611 caccattcttcaaaggtaatctagaaaaaacct 41702643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 47344686 - 47344654
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  47344686 caccattcttcaaaggtaatctagaaaaaacct 47344654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 49881215 - 49881247
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  49881215 caccattcttcaaaggtaatctagaaaaaacct 49881247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 50234030 - 50233998
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  50234030 caccattcttcaaaggtaatctagaaaaaacct 50233998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 51363037 - 51363005
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  51363037 caccattcttcaaaggtaatctagaaaaaacct 51363005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 54805770 - 54805802
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  54805770 caccattcttcaaaggtaatctagaaaaaacct 54805802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 407784 - 407753
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  407784 caccattcttcaaaggtaatctagaaaaaacc 407753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 2243488 - 2243457
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  2243488 caccattcttcaaaggtaatctagaaaaaacc 2243457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 29777409 - 29777440
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  29777409 caccattcttcaaaggtaatctagaaaaaacc 29777440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 31070225 - 31070256
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  31070225 caccattcttcaaaggtaatctagaaaaaacc 31070256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 41949412 - 41949381
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  41949412 caccattcttcaaaggtaatctagaaaaaacc 41949381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 42765993 - 42766024
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  42765993 caccattcttcaaaggtaatctagaaaaaacc 42766024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 43471847 - 43471878
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  43471847 caccattcttcaaaggtaatctagaaaaaacc 43471878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 48313587 - 48313556
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  48313587 caccattcttcaaaggtaatctagaaaaaacc 48313556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 50457962 - 50457993
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  50457962 caccattcttcaaaggtaatctagaaaaaacc 50457993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 53854581 - 53854612
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  53854581 caccattcttcaaaggtaatctagaaaaaacc 53854612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 55056411 - 55056442
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  55056411 caccattcttcaaaggtaatctagaaaaaacc 55056442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 36
Target Start/End: Original strand, 146581 - 146611
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaac 36  Q
    |||||||||||||||||||||||||||||||    
T  146581 caccattcttcaaaggtaatctagaaaaaac 146611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 36
Target Start/End: Original strand, 18462165 - 18462195
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaac 36  Q
    |||||||||||||||||||||||||||||||    
T  18462165 caccattcttcaaaggtaatctagaaaaaac 18462195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 237507 - 237474
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacctc 39  Q
    |||||||||| |||||||||||||||||||||||    
T  237507 caccattctttaaaggtaatctagaaaaaacctc 237474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 35
Target Start/End: Complemental strand, 6019958 - 6019929
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaa 35  Q
    ||||||||||||||||||||||||||||||    
T  6019958 caccattcttcaaaggtaatctagaaaaaa 6019929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 35
Target Start/End: Original strand, 22468922 - 22468951
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaa 35  Q
    ||||||||||||||||||||||||||||||    
T  22468922 caccattcttcaaaggtaatctagaaaaaa 22468951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 35
Target Start/End: Original strand, 22618664 - 22618693
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaa 35  Q
    ||||||||||||||||||||||||||||||    
T  22618664 caccattcttcaaaggtaatctagaaaaaa 22618693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 38
Target Start/End: Original strand, 31532290 - 31532319
Alignment:
Q  9 cattcttcaaaggtaatctagaaaaaacct 38  Q
    ||||||||||||||||||||||||||||||    
T  31532290 cattcttcaaaggtaatctagaaaaaacct 31532319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 35
Target Start/End: Complemental strand, 42222321 - 42222292
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaa 35  Q
    ||||||||||||||||||||||||||||||    
T  42222321 caccattcttcaaaggtaatctagaaaaaa 42222292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 35
Target Start/End: Complemental strand, 42557612 - 42557583
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaa 35  Q
    ||||||||||||||||||||||||||||||    
T  42557612 caccattcttcaaaggtaatctagaaaaaa 42557583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 2826833 - 2826865
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||| ||||||||||||||||    
T  2826833 caccattcttcaaagggaatctagaaaaaacct 2826865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 11972270 - 11972302
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||| ||||||||||||    
T  11972270 caccattcttcaaaggtaatttagaaaaaacct 11972302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 34
Target Start/End: Original strand, 21366761 - 21366789
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaa 34  Q
    |||||||||||||||||||||||||||||    
T  21366761 caccattcttcaaaggtaatctagaaaaa 21366789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 32366812 - 32366844
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    ||||||||||||||| |||||||||||||||||    
T  32366812 caccattcttcaaagataatctagaaaaaacct 32366844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 34835207 - 34835175
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    ||||||| |||||||||||||||||||||||||    
T  34835207 caccatttttcaaaggtaatctagaaaaaacct 34835175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 37239231 - 37239263
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||| ||||||||||||    
T  37239231 caccattcttcaaaggtaatttagaaaaaacct 37239263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 37
Target Start/End: Original strand, 39587934 - 39587962
Alignment:
Q  9 cattcttcaaaggtaatctagaaaaaacc 37  Q
    |||||||||||||||||||||||||||||    
T  39587934 cattcttcaaaggtaatctagaaaaaacc 39587962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 42033205 - 42033173
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    ||||||||||||||||||||||| |||||||||    
T  42033205 caccattcttcaaaggtaatctaaaaaaaacct 42033173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 42085237 - 42085205
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||| ||||||||||||||||||||||    
T  42085237 caccattctttaaaggtaatctagaaaaaacct 42085205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 47662254 - 47662286
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    ||||||| |||||||||||||||||||||||||    
T  47662254 caccattattcaaaggtaatctagaaaaaacct 47662286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 54216343 - 54216311
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||| ||||||||||||    
T  54216343 caccattcttcaaaggtaatttagaaaaaacct 54216311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000005; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 33839867 - 33839900
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacctc 39  Q
    ||||||||||||||||||||||||||||||||||    
T  33839867 caccattcttcaaaggtaatctagaaaaaacctc 33839900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 19563478 - 19563446
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  19563478 caccattcttcaaaggtaatctagaaaaaacct 19563446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 22979799 - 22979831
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  22979799 caccattcttcaaaggtaatctagaaaaaacct 22979831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 27018147 - 27018115
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  27018147 caccattcttcaaaggtaatctagaaaaaacct 27018115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 33332820 - 33332788
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  33332820 caccattcttcaaaggtaatctagaaaaaacct 33332788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 33695973 - 33696005
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  33695973 caccattcttcaaaggtaatctagaaaaaacct 33696005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 42272182 - 42272150
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  42272182 caccattcttcaaaggtaatctagaaaaaacct 42272150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 45063507 - 45063539
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  45063507 caccattcttcaaaggtaatctagaaaaaacct 45063539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 45482689 - 45482657
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  45482689 caccattcttcaaaggtaatctagaaaaaacct 45482657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 46913140 - 46913108
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  46913140 caccattcttcaaaggtaatctagaaaaaacct 46913108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 47740483 - 47740515
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  47740483 caccattcttcaaaggtaatctagaaaaaacct 47740515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 48609829 - 48609861
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  48609829 caccattcttcaaaggtaatctagaaaaaacct 48609861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 10028519 - 10028488
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  10028519 caccattcttcaaaggtaatctagaaaaaacc 10028488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 31586879 - 31586848
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  31586879 caccattcttcaaaggtaatctagaaaaaacc 31586848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 35767512 - 35767481
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  35767512 caccattcttcaaaggtaatctagaaaaaacc 35767481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 40670594 - 40670563
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  40670594 caccattcttcaaaggtaatctagaaaaaacc 40670563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 40
Target Start/End: Original strand, 36816986 - 36817020
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacctct 40  Q
    |||||||||||||||||||| ||||||||||||||    
T  36816986 caccattcttcaaaggtaatttagaaaaaacctct 36817020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 35
Target Start/End: Original strand, 20165966 - 20165995
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaa 35  Q
    ||||||||||||||||||||||||||||||    
T  20165966 caccattcttcaaaggtaatctagaaaaaa 20165995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 38
Target Start/End: Original strand, 33423430 - 33423459
Alignment:
Q  9 cattcttcaaaggtaatctagaaaaaacct 38  Q
    ||||||||||||||||||||||||||||||    
T  33423430 cattcttcaaaggtaatctagaaaaaacct 33423459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 35
Target Start/End: Original strand, 49171514 - 49171543
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaa 35  Q
    ||||||||||||||||||||||||||||||    
T  49171514 caccattcttcaaaggtaatctagaaaaaa 49171543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 2341814 - 2341846
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    ||||||||||||||||||||||| |||||||||    
T  2341814 caccattcttcaaaggtaatctaaaaaaaacct 2341846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 34
Target Start/End: Complemental strand, 15877581 - 15877553
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaa 34  Q
    |||||||||||||||||||||||||||||    
T  15877581 caccattcttcaaaggtaatctagaaaaa 15877553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 16482924 - 16482956
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    ||||||| |||||||||||||||||||||||||    
T  16482924 caccatttttcaaaggtaatctagaaaaaacct 16482956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 17855459 - 17855427
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||| ||||||||||||||||||||||    
T  17855459 caccattctttaaaggtaatctagaaaaaacct 17855427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 24228572 - 24228540
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||| ||||||||||||    
T  24228572 caccattcttcaaaggtaatttagaaaaaacct 24228540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 25037649 - 25037681
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||| ||||||||||||    
T  25037649 caccattcttcaaaggtaatttagaaaaaacct 25037681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 25894069 - 25894101
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||| ||||||||||||    
T  25894069 caccattcttcaaaggtaatttagaaaaaacct 25894101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 32556747 - 32556779
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||| ||||||||||||    
T  32556747 caccattcttcaaaggtaatttagaaaaaacct 32556779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 33411291 - 33411259
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    ||||||||||||||||||||| |||||||||||    
T  33411291 caccattcttcaaaggtaatcaagaaaaaacct 33411259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 33720188 - 33720220
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||| ||||||||||||||||||    
T  33720188 caccattcttcaaaagtaatctagaaaaaacct 33720220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 35355919 - 35355887
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    ||||||||||||||| |||||||||||||||||    
T  35355919 caccattcttcaaagataatctagaaaaaacct 35355887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 44659875 - 44659843
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||| ||||||||||||    
T  44659875 caccattcttcaaaggtaatttagaaaaaacct 44659843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 46817562 - 46817594
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||| ||||||||||||    
T  46817562 caccattcttcaaaggtaatttagaaaaaacct 46817594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000005; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 8615270 - 8615233
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacctctata 43  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  8615270 caccattcttcaaaggtaatctagaaaaaacctttata 8615233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 599922 - 599890
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  599922 caccattcttcaaaggtaatctagaaaaaacct 599890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 929689 - 929657
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  929689 caccattcttcaaaggtaatctagaaaaaacct 929657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 1970741 - 1970709
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  1970741 caccattcttcaaaggtaatctagaaaaaacct 1970709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 16703396 - 16703364
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  16703396 caccattcttcaaaggtaatctagaaaaaacct 16703364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 19415685 - 19415717
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  19415685 caccattcttcaaaggtaatctagaaaaaacct 19415717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 22551213 - 22551245
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  22551213 caccattcttcaaaggtaatctagaaaaaacct 22551245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 28947117 - 28947085
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  28947117 caccattcttcaaaggtaatctagaaaaaacct 28947085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 5882536 - 5882505
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  5882536 caccattcttcaaaggtaatctagaaaaaacc 5882505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 19281207 - 19281238
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  19281207 caccattcttcaaaggtaatctagaaaaaacc 19281238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 24168121 - 24168090
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  24168121 caccattcttcaaaggtaatctagaaaaaacc 24168090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 30467755 - 30467786
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  30467755 caccattcttcaaaggtaatctagaaaaaacc 30467786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 36
Target Start/End: Original strand, 960056 - 960086
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaac 36  Q
    |||||||||||||||||||||||||||||||    
T  960056 caccattcttcaaaggtaatctagaaaaaac 960086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 35
Target Start/End: Complemental strand, 2892218 - 2892189
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaa 35  Q
    ||||||||||||||||||||||||||||||    
T  2892218 caccattcttcaaaggtaatctagaaaaaa 2892189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 35
Target Start/End: Original strand, 30743600 - 30743629
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaa 35  Q
    ||||||||||||||||||||||||||||||    
T  30743600 caccattcttcaaaggtaatctagaaaaaa 30743629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 7167612 - 7167580
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    ||||||| |||||||||||||||||||||||||    
T  7167612 caccatttttcaaaggtaatctagaaaaaacct 7167580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 7393738 - 7393770
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||| ||||||||||||||||||||||    
T  7393738 caccattctttaaaggtaatctagaaaaaacct 7393770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 11743096 - 11743128
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    ||||||||||||| |||||||||||||||||||    
T  11743096 caccattcttcaagggtaatctagaaaaaacct 11743128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 13329411 - 13329379
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||| ||||||||||||    
T  13329411 caccattcttcaaaggtaatttagaaaaaacct 13329379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 14891531 - 14891563
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||| ||||||||||||||||    
T  14891531 caccattcttcaaaggcaatctagaaaaaacct 14891563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 28948986 - 28949018
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||| ||||||||||||    
T  28948986 caccattcttcaaaggtaatttagaaaaaacct 28949018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000005; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 13815370 - 13815407
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacctctata 43  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  13815370 caccattcttcaaaggtaatctagaaaaaacctatata 13815407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 6594610 - 6594642
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  6594610 caccattcttcaaaggtaatctagaaaaaacct 6594642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 10424624 - 10424592
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  10424624 caccattcttcaaaggtaatctagaaaaaacct 10424592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 12814643 - 12814611
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  12814643 caccattcttcaaaggtaatctagaaaaaacct 12814611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 26710374 - 26710342
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  26710374 caccattcttcaaaggtaatctagaaaaaacct 26710342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 27400432 - 27400400
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  27400432 caccattcttcaaaggtaatctagaaaaaacct 27400400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 28019973 - 28020005
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  28019973 caccattcttcaaaggtaatctagaaaaaacct 28020005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 32608409 - 32608377
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  32608409 caccattcttcaaaggtaatctagaaaaaacct 32608377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 40735493 - 40735461
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  40735493 caccattcttcaaaggtaatctagaaaaaacct 40735461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 746495 - 746464
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  746495 caccattcttcaaaggtaatctagaaaaaacc 746464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 2325041 - 2325072
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  2325041 caccattcttcaaaggtaatctagaaaaaacc 2325072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 4034621 - 4034590
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  4034621 caccattcttcaaaggtaatctagaaaaaacc 4034590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 27024444 - 27024413
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  27024444 caccattcttcaaaggtaatctagaaaaaacc 27024413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 27651186 - 27651217
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  27651186 caccattcttcaaaggtaatctagaaaaaacc 27651217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 45371019 - 45370988
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  45371019 caccattcttcaaaggtaatctagaaaaaacc 45370988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 36
Target Start/End: Complemental strand, 5726158 - 5726128
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaac 36  Q
    |||||||||||||||||||||||||||||||    
T  5726158 caccattcttcaaaggtaatctagaaaaaac 5726128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 36
Target Start/End: Original strand, 7892840 - 7892870
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaac 36  Q
    |||||||||||||||||||||||||||||||    
T  7892840 caccattcttcaaaggtaatctagaaaaaac 7892870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 37
Target Start/End: Complemental strand, 11185000 - 11184970
Alignment:
Q  7 accattcttcaaaggtaatctagaaaaaacc 37  Q
    |||||||||||||||||||||||||||||||    
T  11185000 accattcttcaaaggtaatctagaaaaaacc 11184970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 38
Target Start/End: Original strand, 37255486 - 37255516
Alignment:
Q  8 ccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||    
T  37255486 ccattcttcaaaggtaatctagaaaaaacct 37255516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 36
Target Start/End: Complemental strand, 38997130 - 38997100
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaac 36  Q
    |||||||||||||||||||||||||||||||    
T  38997130 caccattcttcaaaggtaatctagaaaaaac 38997100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 35
Target Start/End: Complemental strand, 32327390 - 32327361
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaa 35  Q
    ||||||||||||||||||||||||||||||    
T  32327390 caccattcttcaaaggtaatctagaaaaaa 32327361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 37621022 - 37621055
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacctc 39  Q
    ||||||||||||||||||||||| ||||||||||    
T  37621022 caccattcttcaaaggtaatctaaaaaaaacctc 37621055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 2000478 - 2000510
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||| ||||||||||||    
T  2000478 caccattcttcaaaggtaatttagaaaaaacct 2000510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 2688870 - 2688902
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||| ||||||||||||    
T  2688870 caccattcttcaaaggtaatttagaaaaaacct 2688902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 8433068 - 8433100
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    ||||||||||||||| |||||||||||||||||    
T  8433068 caccattcttcaaagataatctagaaaaaacct 8433100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 12333636 - 12333668
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||| ||||||||||||    
T  12333636 caccattcttcaaaggtaatttagaaaaaacct 12333668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 15925109 - 15925077
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||| ||||||||||||||||||||||    
T  15925109 caccattcttgaaaggtaatctagaaaaaacct 15925077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 17600865 - 17600833
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    ||||||| |||||||||||||||||||||||||    
T  17600865 caccatttttcaaaggtaatctagaaaaaacct 17600833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 34
Target Start/End: Complemental strand, 23901808 - 23901780
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaa 34  Q
    |||||||||||||||||||||||||||||    
T  23901808 caccattcttcaaaggtaatctagaaaaa 23901780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 40544217 - 40544249
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||| ||||||||||||    
T  40544217 caccattcttcaaaggtaatttagaaaaaacct 40544249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 5946077 - 5946045
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  5946077 caccattcttcaaaggtaatctagaaaaaacct 5946045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 22878421 - 22878389
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  22878421 caccattcttcaaaggtaatctagaaaaaacct 22878389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 25248069 - 25248037
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  25248069 caccattcttcaaaggtaatctagaaaaaacct 25248037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 32984229 - 32984261
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  32984229 caccattcttcaaaggtaatctagaaaaaacct 32984261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 37419970 - 37419938
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  37419970 caccattcttcaaaggtaatctagaaaaaacct 37419938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 41653925 - 41653893
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  41653925 caccattcttcaaaggtaatctagaaaaaacct 41653893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 41862250 - 41862218
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  41862250 caccattcttcaaaggtaatctagaaaaaacct 41862218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 45236717 - 45236749
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  45236717 caccattcttcaaaggtaatctagaaaaaacct 45236749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 6366016 - 6365985
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  6366016 caccattcttcaaaggtaatctagaaaaaacc 6365985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 12032982 - 12032951
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  12032982 caccattcttcaaaggtaatctagaaaaaacc 12032951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 37301477 - 37301508
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  37301477 caccattcttcaaaggtaatctagaaaaaacc 37301508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 37956451 - 37956420
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  37956451 caccattcttcaaaggtaatctagaaaaaacc 37956420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 43328737 - 43328706
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  43328737 caccattcttcaaaggtaatctagaaaaaacc 43328706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 36
Target Start/End: Complemental strand, 2275943 - 2275913
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaac 36  Q
    |||||||||||||||||||||||||||||||    
T  2275943 caccattcttcaaaggtaatctagaaaaaac 2275913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 36
Target Start/End: Complemental strand, 9734285 - 9734255
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaac 36  Q
    |||||||||||||||||||||||||||||||    
T  9734285 caccattcttcaaaggtaatctagaaaaaac 9734255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 36
Target Start/End: Original strand, 40435305 - 40435335
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaac 36  Q
    |||||||||||||||||||||||||||||||    
T  40435305 caccattcttcaaaggtaatctagaaaaaac 40435335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 35
Target Start/End: Complemental strand, 2714579 - 2714550
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaa 35  Q
    ||||||||||||||||||||||||||||||    
T  2714579 caccattcttcaaaggtaatctagaaaaaa 2714550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 9013713 - 9013684
Alignment:
Q  7 accattcttcaaaggtaatctagaaaaaac 36  Q
    ||||||||||||||||||||||||||||||    
T  9013713 accattcttcaaaggtaatctagaaaaaac 9013684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 35
Target Start/End: Original strand, 17718874 - 17718903
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaa 35  Q
    ||||||||||||||||||||||||||||||    
T  17718874 caccattcttcaaaggtaatctagaaaaaa 17718903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 35
Target Start/End: Original strand, 31831107 - 31831136
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaa 35  Q
    ||||||||||||||||||||||||||||||    
T  31831107 caccattcttcaaaggtaatctagaaaaaa 31831136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 2379170 - 2379138
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||| ||||||||||||    
T  2379170 caccattcttcaaaggtaatttagaaaaaacct 2379138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 27243280 - 27243312
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||| ||||||||||||    
T  27243280 caccattcttcaaaggtaatttagaaaaaacct 27243312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 27254855 - 27254887
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||| ||||||||||||    
T  27254855 caccattcttcaaaggtaatttagaaaaaacct 27254887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 29048555 - 29048587
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    ||||||||||||||| |||||||||||||||||    
T  29048555 caccattcttcaaagataatctagaaaaaacct 29048587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 31149031 - 31149063
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    ||||||| |||||||||||||||||||||||||    
T  31149031 caccatttttcaaaggtaatctagaaaaaacct 31149063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 739856 - 739888
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  739856 caccattcttcaaaggtaatctagaaaaaacct 739888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 3466833 - 3466865
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  3466833 caccattcttcaaaggtaatctagaaaaaacct 3466865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 5137745 - 5137713
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  5137745 caccattcttcaaaggtaatctagaaaaaacct 5137713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 12558170 - 12558202
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  12558170 caccattcttcaaaggtaatctagaaaaaacct 12558202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 24253412 - 24253380
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  24253412 caccattcttcaaaggtaatctagaaaaaacct 24253380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 25831551 - 25831519
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  25831551 caccattcttcaaaggtaatctagaaaaaacct 25831519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 43326531 - 43326563
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  43326531 caccattcttcaaaggtaatctagaaaaaacct 43326563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 5185002 - 5184971
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  5185002 caccattcttcaaaggtaatctagaaaaaacc 5184971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 27278629 - 27278660
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  27278629 caccattcttcaaaggtaatctagaaaaaacc 27278660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 40886179 - 40886210
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  40886179 caccattcttcaaaggtaatctagaaaaaacc 40886210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 1402646 - 1402679
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacctc 39  Q
    ||||||| ||||||||||||||||||||||||||    
T  1402646 caccatttttcaaaggtaatctagaaaaaacctc 1402679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 35
Target Start/End: Original strand, 15398634 - 15398663
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaa 35  Q
    ||||||||||||||||||||||||||||||    
T  15398634 caccattcttcaaaggtaatctagaaaaaa 15398663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 35
Target Start/End: Original strand, 18479820 - 18479849
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaa 35  Q
    ||||||||||||||||||||||||||||||    
T  18479820 caccattcttcaaaggtaatctagaaaaaa 18479849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 42247923 - 42247956
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacctc 39  Q
    |||||||||||||||||||| |||||||||||||    
T  42247923 caccattcttcaaaggtaatttagaaaaaacctc 42247956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 890936 - 890904
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||| ||||||||||||||||||    
T  890936 caccattcttcaaaagtaatctagaaaaaacct 890904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 4149724 - 4149692
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||| ||||||||||||    
T  4149724 caccattcttcaaaggtaatatagaaaaaacct 4149692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 6901829 - 6901797
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    ||||||||||||||| |||||||||||||||||    
T  6901829 caccattcttcaaagataatctagaaaaaacct 6901797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 7722079 - 7722047
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||| ||||||||||||||||    
T  7722079 caccattcttcaaaggcaatctagaaaaaacct 7722047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 13957700 - 13957668
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||| ||||||||||||    
T  13957700 caccattcttcaaaggtaatttagaaaaaacct 13957668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 27501207 - 27501239
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    ||||||||||||||||||||||| |||||||||    
T  27501207 caccattcttcaaaggtaatctaaaaaaaacct 27501239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 27503409 - 27503377
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||| ||||||||||||    
T  27503409 caccattcttcaaaggtaatttagaaaaaacct 27503377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 36472425 - 36472457
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    ||||||| |||||||||||||||||||||||||    
T  36472425 caccatttttcaaaggtaatctagaaaaaacct 36472457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 38638051 - 38638083
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    ||||||| |||||||||||||||||||||||||    
T  38638051 caccatttttcaaaggtaatctagaaaaaacct 38638083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 43262335 - 43262367
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||| ||||||||||||    
T  43262335 caccattcttcaaaggtaatatagaaaaaacct 43262367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 2556998 - 2557030
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  2556998 caccattcttcaaaggtaatctagaaaaaacct 2557030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 3285432 - 3285400
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  3285432 caccattcttcaaaggtaatctagaaaaaacct 3285400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 6327699 - 6327731
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  6327699 caccattcttcaaaggtaatctagaaaaaacct 6327731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 23984785 - 23984753
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  23984785 caccattcttcaaaggtaatctagaaaaaacct 23984753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 23994878 - 23994846
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  23994878 caccattcttcaaaggtaatctagaaaaaacct 23994846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 24245177 - 24245209
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  24245177 caccattcttcaaaggtaatctagaaaaaacct 24245209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 25058718 - 25058686
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  25058718 caccattcttcaaaggtaatctagaaaaaacct 25058686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 26277207 - 26277175
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  26277207 caccattcttcaaaggtaatctagaaaaaacct 26277175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 27983739 - 27983771
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  27983739 caccattcttcaaaggtaatctagaaaaaacct 27983771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 31308031 - 31307999
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  31308031 caccattcttcaaaggtaatctagaaaaaacct 31307999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 33112969 - 33113001
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  33112969 caccattcttcaaaggtaatctagaaaaaacct 33113001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 35692816 - 35692848
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  35692816 caccattcttcaaaggtaatctagaaaaaacct 35692848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 38332011 - 38332043
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  38332011 caccattcttcaaaggtaatctagaaaaaacct 38332043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 44662000 - 44661968
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  44662000 caccattcttcaaaggtaatctagaaaaaacct 44661968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 45538183 - 45538151
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  45538183 caccattcttcaaaggtaatctagaaaaaacct 45538151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 46616579 - 46616547
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  46616579 caccattcttcaaaggtaatctagaaaaaacct 46616547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 47671616 - 47671584
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  47671616 caccattcttcaaaggtaatctagaaaaaacct 47671584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 48373534 - 48373502
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||||||||||||||||    
T  48373534 caccattcttcaaaggtaatctagaaaaaacct 48373502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 4156217 - 4156248
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  4156217 caccattcttcaaaggtaatctagaaaaaacc 4156248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 5980098 - 5980067
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  5980098 caccattcttcaaaggtaatctagaaaaaacc 5980067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 5981200 - 5981169
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  5981200 caccattcttcaaaggtaatctagaaaaaacc 5981169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 17995103 - 17995134
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  17995103 caccattcttcaaaggtaatctagaaaaaacc 17995134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 23221081 - 23221112
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  23221081 caccattcttcaaaggtaatctagaaaaaacc 23221112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 24885531 - 24885500
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  24885531 caccattcttcaaaggtaatctagaaaaaacc 24885500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 31040739 - 31040708
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  31040739 caccattcttcaaaggtaatctagaaaaaacc 31040708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 46967193 - 46967224
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  46967193 caccattcttcaaaggtaatctagaaaaaacc 46967224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 49254127 - 49254158
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  49254127 caccattcttcaaaggtaatctagaaaaaacc 49254158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 36
Target Start/End: Original strand, 26525041 - 26525071
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaac 36  Q
    |||||||||||||||||||||||||||||||    
T  26525041 caccattcttcaaaggtaatctagaaaaaac 26525071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 37
Target Start/End: Original strand, 49399141 - 49399171
Alignment:
Q  7 accattcttcaaaggtaatctagaaaaaacc 37  Q
    |||||||||||||||||||||||||||||||    
T  49399141 accattcttcaaaggtaatctagaaaaaacc 49399171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 36
Target Start/End: Original strand, 51403159 - 51403189
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaac 36  Q
    |||||||||||||||||||||||||||||||    
T  51403159 caccattcttcaaaggtaatctagaaaaaac 51403189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 3611166 - 3611134
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||| ||||||||||||    
T  3611166 caccattcttcaaaggtaatttagaaaaaacct 3611134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 24649863 - 24649895
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    ||||||| |||||||||||||||||||||||||    
T  24649863 caccatttttcaaaggtaatctagaaaaaacct 24649895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 26472320 - 26472352
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||| ||||||||||||    
T  26472320 caccattcttcaaaggtaatttagaaaaaacct 26472352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 29770700 - 29770668
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||| ||||||||||||    
T  29770700 caccattcttcaaaggtaatttagaaaaaacct 29770668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 31844406 - 31844374
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||| ||||||||||||||||||||||||    
T  31844406 caccattcctcaaaggtaatctagaaaaaacct 31844374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 34
Target Start/End: Original strand, 31980087 - 31980115
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaa 34  Q
    |||||||||||||||||||||||||||||    
T  31980087 caccattcttcaaaggtaatctagaaaaa 31980115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 35
Target Start/End: Original strand, 38790350 - 38790378
Alignment:
Q  7 accattcttcaaaggtaatctagaaaaaa 35  Q
    |||||||||||||||||||||||||||||    
T  38790350 accattcttcaaaggtaatctagaaaaaa 38790378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 41999845 - 41999813
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    ||||||| |||||||||||||||||||||||||    
T  41999845 caccatttttcaaaggtaatctagaaaaaacct 41999813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 42234870 - 42234838
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||| ||||||||||||    
T  42234870 caccattcttcaaaggtaatttagaaaaaacct 42234838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 34
Target Start/End: Complemental strand, 43251741 - 43251713
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaa 34  Q
    |||||||||||||||||||||||||||||    
T  43251741 caccattcttcaaaggtaatctagaaaaa 43251713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 35
Target Start/End: Original strand, 47772306 - 47772334
Alignment:
Q  7 accattcttcaaaggtaatctagaaaaaa 35  Q
    |||||||||||||||||||||||||||||    
T  47772306 accattcttcaaaggtaatctagaaaaaa 47772334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 51057101 - 51057069
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    |||||||||||||||||||| ||||||||||||    
T  51057101 caccattcttcaaaggtaatttagaaaaaacct 51057069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 2584 - 2615
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  2584 caccattcttcaaaggtaatctagaaaaaacc 2615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Complemental strand, 32591 - 32560
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  32591 caccattcttcaaaggtaatctagaaaaaacc 32560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 39708 - 39739
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  39708 caccattcttcaaaggtaatctagaaaaaacc 39739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 13914 - 13945
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  13914 caccattcttcaaaggtaatctagaaaaaacc 13945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 37
Target Start/End: Original strand, 75396 - 75427
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacc 37  Q
    ||||||||||||||||||||||||||||||||    
T  75396 caccattcttcaaaggtaatctagaaaaaacc 75427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 35
Target Start/End: Complemental strand, 3118 - 3089
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaa 35  Q
    ||||||||||||||||||||||||||||||    
T  3118 caccattcttcaaaggtaatctagaaaaaa 3089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2003 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold2003
Description:

Target: scaffold2003; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 132 - 100
Alignment:
Q  6 caccattcttcaaaggtaatctagaaaaaacct 38  Q
    ||||||| |||||||||||||||||||||||||    
T  132 caccatttttcaaaggtaatctagaaaaaacct 100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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