View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4744_low_5 (Length: 275)
Name: NF4744_low_5
Description: NF4744
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4744_low_5 |
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Alignment Details
Target: chr4 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 41705671 - 41705927
Alignment:
| Q |
1 |
cttccgatctatgcacaatggcttattgccctttagactccattgaacccaaagactgcggttcatttcactgcccaccattctactacgcttacggcga |
100 |
Q |
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||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
41705671 |
cttccgatctatgcacaatggctcattgccctttagactccattgaaaccaaagactgcggttcatttcactgtccaccattctactacgcttacggcga |
41705770 |
T |
|
| Q |
101 |
tggaagcttaatagcttctctctatcgcgatacactttctctttctactcttcaacttacaaaattcacattcggttgtgctcatacaactttctccgaa |
200 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
41705771 |
tggaagcttaatagcttctctctatcgcgatacactttctctttctactcttcaacttacaaacttcacattcggttgtgctcatacaactttctccgaa |
41705870 |
T |
|
| Q |
201 |
cccaccggagtcgctggcttcggtcgtggattactttctctcccagctcagttagct |
257 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41705871 |
cccaccggagtcgctggcttcggtcgtggattactttctctcccagctcagttagct |
41705927 |
T |
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