View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4745-Insertion-1 (Length: 1040)

Name: NF4745-Insertion-1
Description: NF4745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4745-Insertion-1
NF4745-Insertion-1
[»] chr1 (67 HSPs)
chr1 (8-440)||(33289411-33289843)
chr1 (495-834)||(33289001-33289345)
chr1 (9-428)||(33139016-33139435)
chr1 (9-428)||(33180256-33180675)
chr1 (10-427)||(33157442-33157859)
chr1 (733-832)||(50503196-50503295)
chr1 (733-834)||(14967251-14967352)
chr1 (733-827)||(1597202-1597296)
chr1 (733-827)||(8338688-8338782)
chr1 (733-827)||(34953929-34954023)
chr1 (733-827)||(45115203-45115297)
chr1 (733-834)||(50550132-50550233)
chr1 (733-832)||(3549792-3549891)
chr1 (736-827)||(39362825-39362916)
chr1 (952-1027)||(34307185-34307260)
chr1 (748-827)||(23575351-23575430)
chr1 (713-827)||(41007710-41007824)
chr1 (733-823)||(42761466-42761556)
chr1 (733-834)||(2492502-2492603)
chr1 (734-827)||(6283549-6283642)
chr1 (733-818)||(14891780-14891865)
chr1 (733-818)||(33939339-33939424)
chr1 (734-827)||(48083537-48083630)
chr1 (734-810)||(24115765-24115841)
chr1 (734-818)||(41161479-41161563)
chr1 (751-834)||(47969516-47969599)
chr1 (733-803)||(6508410-6508480)
chr1 (733-795)||(10832059-10832121)
chr1 (741-827)||(31130846-31130932)
chr1 (733-827)||(31998222-31998316)
chr1 (750-827)||(26674219-26674296)
chr1 (733-818)||(31699000-31699085)
chr1 (741-834)||(33765808-33765901)
chr1 (734-827)||(36040179-36040272)
chr1 (733-810)||(44349943-44350020)
chr1 (751-827)||(9590777-9590853)
chr1 (734-814)||(11324479-11324559)
chr1 (734-814)||(11482500-11482580)
chr1 (752-827)||(14958714-14958789)
chr1 (727-834)||(17342354-17342461)
chr1 (733-832)||(18607113-18607212)
chr1 (733-827)||(31889076-31889170)
chr1 (713-827)||(43728179-43728293)
chr1 (741-827)||(46829893-46829979)
chr1 (741-827)||(47023211-47023297)
chr1 (733-818)||(14365407-14365492)
chr1 (734-827)||(28725499-28725592)
chr1 (741-810)||(31130744-31130813)
chr1 (738-827)||(50154325-50154413)
chr1 (733-793)||(8455066-8455126)
chr1 (748-832)||(13877013-13877097)
chr1 (734-834)||(27068806-27068906)
chr1 (734-834)||(41007691-41007791)
chr1 (741-813)||(50755224-50755296)
chr1 (952-1033)||(2509093-2509175)
chr1 (752-827)||(8984220-8984295)
chr1 (735-834)||(14967240-14967339)
chr1 (744-827)||(31325834-31325917)
chr1 (899-941)||(33288885-33288928)
chr1 (734-768)||(50878354-50878388)
chr1 (758-827)||(8397023-8397092)
chr1 (972-1033)||(19258713-19258773)
chr1 (742-827)||(20621263-20621348)
chr1 (751-828)||(29663697-29663774)
chr1 (952-1028)||(39249909-39249985)
chr1 (733-790)||(41970858-41970915)
chr1 (972-1005)||(46901803-46901836)
[»] chr2 (55 HSPs)
chr2 (740-834)||(38465815-38465909)
chr2 (733-834)||(32630419-32630520)
chr2 (733-832)||(15119805-15119904)
chr2 (733-834)||(1961322-1961423)
chr2 (733-827)||(8740532-8740626)
chr2 (733-827)||(26003468-26003562)
chr2 (733-834)||(15859577-15859678)
chr2 (733-827)||(43732151-43732245)
chr2 (741-834)||(43701380-43701473)
chr2 (733-827)||(38181793-38181887)
chr2 (952-1028)||(14573064-14573140)
chr2 (750-827)||(23377972-23378049)
chr2 (733-818)||(26234066-26234151)
chr2 (751-827)||(2050121-2050197)
chr2 (727-827)||(8383192-8383292)
chr2 (755-827)||(15916766-15916838)
chr2 (981-1033)||(16089920-16089971)
chr2 (734-794)||(20504257-20504317)
chr2 (980-1028)||(37498909-37498956)
chr2 (749-832)||(11726524-11726607)
chr2 (741-832)||(38618423-38618514)
chr2 (952-1033)||(3830938-3831019)
chr2 (952-1033)||(33732638-33732719)
chr2 (751-817)||(37195083-37195149)
chr2 (975-1025)||(44958206-44958255)
chr2 (733-834)||(7079396-7079497)
chr2 (734-827)||(19612955-19613048)
chr2 (750-827)||(31101979-31102056)
chr2 (749-834)||(33555206-33555291)
chr2 (735-827)||(37182831-37182923)
chr2 (745-832)||(800718-800805)
chr2 (751-834)||(31024197-31024280)
chr2 (733-795)||(19951510-19951572)
chr2 (733-827)||(41805287-41805381)
chr2 (733-810)||(10996259-10996336)
chr2 (734-827)||(24457133-24457226)
chr2 (734-810)||(5574160-5574236)
chr2 (750-810)||(11153235-11153295)
chr2 (733-832)||(40204453-40204555)
chr2 (733-773)||(44868525-44868565)
chr2 (733-792)||(11342038-11342097)
chr2 (763-834)||(21183370-21183441)
chr2 (733-776)||(27331843-27331886)
chr2 (733-827)||(32460754-32460849)
chr2 (752-827)||(37396236-37396311)
chr2 (733-776)||(40187327-40187370)
chr2 (732-782)||(6166101-6166151)
chr2 (785-827)||(11093563-11093605)
chr2 (749-783)||(42955110-42955144)
chr2 (734-827)||(9431230-9431323)
chr2 (762-827)||(21488069-21488134)
chr2 (733-810)||(29819820-29819897)
chr2 (733-766)||(33555271-33555304)
chr2 (733-818)||(36547354-36547439)
chr2 (972-1009)||(41188859-41188896)
[»] chr4 (70 HSPs)
chr4 (743-827)||(18626740-18626824)
chr4 (733-818)||(48603577-48603662)
chr4 (975-1033)||(35545005-35545063)
chr4 (737-806)||(48414910-48414979)
chr4 (734-827)||(3511723-3511816)
chr4 (733-834)||(4406267-4406368)
chr4 (733-834)||(40952374-40952475)
chr4 (755-827)||(10572754-10572826)
chr4 (741-832)||(19878314-19878405)
chr4 (741-827)||(16468237-16468323)
chr4 (733-823)||(36786163-36786253)
chr4 (975-1033)||(44275799-44275856)
chr4 (733-834)||(16170923-16171024)
chr4 (741-834)||(40881453-40881546)
chr4 (734-827)||(56328483-56328576)
chr4 (750-826)||(4484104-4484180)
chr4 (733-827)||(14450970-14451064)
chr4 (741-827)||(24798148-24798234)
chr4 (733-827)||(32599493-32599587)
chr4 (741-826)||(18423913-18423998)
chr4 (751-832)||(40814700-40814781)
chr4 (733-818)||(49481893-49481978)
chr4 (733-818)||(54713111-54713196)
chr4 (751-827)||(5816570-5816646)
chr4 (733-826)||(21649367-21649462)
chr4 (741-832)||(54931840-54931931)
chr4 (733-827)||(33693982-33694076)
chr4 (733-827)||(36072583-36072677)
chr4 (740-834)||(39533776-39533870)
chr4 (732-834)||(46518801-46518903)
chr4 (734-827)||(21884052-21884145)
chr4 (741-818)||(23071427-23071504)
chr4 (742-827)||(49231300-49231385)
chr4 (755-827)||(25138718-25138790)
chr4 (751-827)||(38298121-38298197)
chr4 (735-827)||(52914013-52914105)
chr4 (734-793)||(7215547-7215606)
chr4 (741-832)||(12912637-12912728)
chr4 (734-833)||(22493590-22493689)
chr4 (982-1033)||(49243915-49243965)
chr4 (741-827)||(55416321-55416405)
chr4 (952-1033)||(6112699-6112780)
chr4 (733-827)||(12672460-12672552)
chr4 (733-827)||(27537069-27537163)
chr4 (748-834)||(41654526-41654612)
chr4 (742-827)||(2440943-2441028)
chr4 (741-814)||(4708582-4708655)
chr4 (750-827)||(8826898-8826975)
chr4 (733-814)||(21113038-21113119)
chr4 (733-834)||(21142116-21142217)
chr4 (988-1033)||(21390996-21391040)
chr4 (750-827)||(26920705-26920782)
chr4 (734-827)||(44239817-44239910)
chr4 (741-810)||(51232292-51232361)
chr4 (751-827)||(2582841-2582917)
chr4 (972-1028)||(28093142-28093197)
chr4 (751-827)||(50686038-50686114)
chr4 (734-818)||(52817609-52817693)
chr4 (751-827)||(55936018-55936094)
chr4 (952-1033)||(3672343-3672425)
chr4 (975-1033)||(7217858-7217916)
chr4 (733-776)||(34616228-34616271)
chr4 (733-772)||(38716396-38716435)
chr4 (733-776)||(39160898-39160941)
chr4 (748-818)||(4044326-4044396)
chr4 (766-832)||(23003990-23004056)
chr4 (713-782)||(38539471-38539540)
chr4 (749-794)||(40575905-40575950)
chr4 (751-827)||(50371215-50371292)
chr4 (742-791)||(51829195-51829244)
[»] scaffold0036 (1 HSPs)
scaffold0036 (737-834)||(89624-89721)
[»] chr8 (47 HSPs)
chr8 (741-818)||(3225801-3225878)
chr8 (733-818)||(10117012-10117097)
chr8 (748-827)||(7258618-7258697)
chr8 (733-827)||(5888369-5888463)
chr8 (733-827)||(27518348-27518442)
chr8 (733-834)||(13080114-13080215)
chr8 (733-827)||(25267988-25268081)
chr8 (972-1033)||(18184643-18184703)
chr8 (750-827)||(24287818-24287895)
chr8 (732-832)||(18603470-18603570)
chr8 (733-823)||(2805850-2805940)
chr8 (741-827)||(9015849-9015935)
chr8 (733-827)||(31810347-31810441)
chr8 (733-795)||(45045442-45045504)
chr8 (733-834)||(24017731-24017832)
chr8 (733-827)||(11335600-11335694)
chr8 (975-1025)||(12665438-12665487)
chr8 (733-827)||(13290048-13290142)
chr8 (748-818)||(17923707-17923777)
chr8 (952-1009)||(30432408-30432466)
chr8 (733-827)||(33070198-33070292)
chr8 (733-827)||(40640311-40640405)
chr8 (750-827)||(2296507-2296584)
chr8 (733-834)||(10934616-10934717)
chr8 (733-818)||(13496477-13496562)
chr8 (734-827)||(31505052-31505145)
chr8 (767-827)||(2116139-2116199)
chr8 (712-832)||(11295656-11295776)
chr8 (748-832)||(33385199-33385283)
chr8 (972-1028)||(42162688-42162743)
chr8 (751-834)||(7484648-7484731)
chr8 (741-827)||(20546671-20546757)
chr8 (733-827)||(23627679-23627773)
chr8 (727-824)||(2382622-2382719)
chr8 (952-1028)||(31318874-31318950)
chr8 (750-827)||(36916613-36916690)
chr8 (734-834)||(11295690-11295790)
chr8 (747-827)||(24053630-24053710)
chr8 (734-806)||(33574842-33574913)
chr8 (972-1028)||(44081870-44081925)
chr8 (733-776)||(3444635-3444678)
chr8 (972-1027)||(36189306-36189360)
chr8 (748-827)||(38949001-38949080)
chr8 (733-827)||(41387795-41387889)
chr8 (778-827)||(10335200-10335249)
chr8 (734-827)||(40098793-40098886)
chr8 (746-783)||(43970959-43970996)
[»] chr3 (58 HSPs)
chr3 (733-834)||(37897695-37897796)
chr3 (733-833)||(24075474-24075572)
chr3 (733-834)||(52215893-52215994)
chr3 (733-832)||(12744914-12745013)
chr3 (750-827)||(26121569-26121646)
chr3 (752-827)||(26244412-26244487)
chr3 (975-1033)||(30735536-30735594)
chr3 (733-827)||(45736720-45736814)
chr3 (733-827)||(51060676-51060770)
chr3 (750-827)||(26243709-26243786)
chr3 (974-1031)||(29472901-29472957)
chr3 (751-834)||(29222829-29222912)
chr3 (733-827)||(8504863-8504957)
chr3 (733-827)||(10872705-10872799)
chr3 (733-818)||(3074820-3074905)
chr3 (748-821)||(14756436-14756509)
chr3 (733-834)||(24694254-24694355)
chr3 (734-827)||(25881150-25881243)
chr3 (733-818)||(38677578-38677663)
chr3 (952-1028)||(46111990-46112066)
chr3 (972-1028)||(21559651-21559706)
chr3 (736-832)||(52866445-52866541)
chr3 (752-826)||(4181965-4182039)
chr3 (748-818)||(12047287-12047356)
chr3 (733-827)||(29389340-29389434)
chr3 (952-1025)||(51339832-51339905)
chr3 (733-814)||(331844-331925)
chr3 (733-834)||(27224606-27224707)
chr3 (733-785)||(3972481-3972533)
chr3 (733-785)||(3997345-3997397)
chr3 (751-827)||(47334673-47334749)
chr3 (748-827)||(22496984-22497063)
chr3 (952-1033)||(34749938-34750020)
chr3 (748-827)||(41743623-41743702)
chr3 (751-834)||(54595816-54595899)
chr3 (735-785)||(3994561-3994611)
chr3 (733-823)||(4821418-4821508)
chr3 (733-795)||(9492689-9492751)
chr3 (715-776)||(23090035-23090096)
chr3 (734-795)||(35987496-35987557)
chr3 (972-1025)||(36370387-36370439)
chr3 (733-834)||(42929019-42929120)
chr3 (741-810)||(50466834-50466902)
chr3 (733-814)||(51253716-51253797)
chr3 (734-827)||(52315404-52315497)
chr3 (748-827)||(24722720-24722799)
chr3 (733-776)||(27224593-27224636)
chr3 (952-1033)||(36749475-36749557)
chr3 (733-776)||(43177101-43177144)
chr3 (734-776)||(22173809-22173851)
chr3 (741-827)||(26104807-26104893)
chr3 (952-1005)||(44000058-44000112)
chr3 (734-827)||(8439291-8439384)
chr3 (751-832)||(34327539-34327620)
chr3 (763-832)||(37807538-37807607)
chr3 (733-834)||(41253957-41254058)
chr3 (766-827)||(43599131-43599192)
chr3 (733-834)||(50744992-50745093)
[»] scaffold0009 (3 HSPs)
scaffold0009 (733-827)||(146001-146095)
scaffold0009 (733-817)||(7700-7784)
scaffold0009 (733-832)||(216286-216385)
[»] chr6 (37 HSPs)
chr6 (733-827)||(13281547-13281641)
chr6 (733-810)||(12383639-12383716)
chr6 (748-827)||(2827587-2827666)
chr6 (727-794)||(11746294-11746361)
chr6 (733-827)||(12383820-12383914)
chr6 (721-827)||(20704056-20704162)
chr6 (733-827)||(28554980-28555074)
chr6 (733-827)||(31398259-31398353)
chr6 (716-834)||(31996495-31996613)
chr6 (748-827)||(11637198-11637276)
chr6 (741-827)||(14310542-14310628)
chr6 (734-827)||(6560690-6560783)
chr6 (734-827)||(8145982-8146075)
chr6 (733-823)||(8449611-8449703)
chr6 (733-823)||(8458415-8458507)
chr6 (972-1033)||(13697658-13697718)
chr6 (741-834)||(31158869-31158961)
chr6 (741-834)||(31714561-31714654)
chr6 (754-834)||(12218471-12218551)
chr6 (751-827)||(15517121-15517197)
chr6 (751-834)||(34379766-34379849)
chr6 (733-827)||(3199751-3199845)
chr6 (752-834)||(10258330-10258412)
chr6 (952-1033)||(14023003-14023084)
chr6 (751-827)||(6263381-6263458)
chr6 (734-827)||(7158270-7158363)
chr6 (733-794)||(14218263-14218324)
chr6 (952-1032)||(24208513-24208593)
chr6 (734-827)||(30397739-30397831)
chr6 (751-827)||(18886341-18886417)
chr6 (733-832)||(13506847-13506946)
chr6 (737-775)||(1875050-1875088)
chr6 (952-1029)||(3986950-3987027)
chr6 (741-775)||(31759938-31759972)
chr6 (733-795)||(34170091-34170153)
chr6 (734-827)||(17773534-17773627)
chr6 (734-827)||(21506496-21506589)
[»] chr5 (45 HSPs)
chr5 (733-826)||(71272-71364)
chr5 (734-818)||(11795750-11795834)
chr5 (952-1033)||(1815657-1815738)
chr5 (742-832)||(3100433-3100523)
chr5 (733-827)||(14153382-14153476)
chr5 (733-827)||(18033388-18033482)
chr5 (972-1033)||(31800648-31800708)
chr5 (733-827)||(20518204-20518298)
chr5 (734-832)||(25773271-25773369)
chr5 (733-827)||(35032303-35032397)
chr5 (733-834)||(694219-694320)
chr5 (733-802)||(43482830-43482899)
chr5 (733-825)||(26141768-26141860)
chr5 (748-827)||(22650889-22650968)
chr5 (734-827)||(5259418-5259511)
chr5 (750-834)||(36169073-36169157)
chr5 (751-827)||(38370420-38370496)
chr5 (733-827)||(28518731-28518829)
chr5 (734-827)||(33075079-33075172)
chr5 (734-818)||(7738426-7738510)
chr5 (739-827)||(17153442-17153530)
chr5 (972-1028)||(39371017-39371072)
chr5 (733-827)||(1100090-1100184)
chr5 (733-834)||(14772574-14772673)
chr5 (952-1028)||(2237345-2237421)
chr5 (733-782)||(4082816-4082865)
chr5 (733-834)||(4297211-4297311)
chr5 (952-1028)||(9408085-9408161)
chr5 (727-827)||(29177746-29177844)
chr5 (734-794)||(13157347-13157407)
chr5 (733-781)||(15549404-15549452)
chr5 (732-812)||(26432536-26432616)
chr5 (733-781)||(32398082-32398130)
chr5 (732-827)||(1100069-1100164)
chr5 (733-800)||(5984043-5984110)
chr5 (764-827)||(31963552-31963615)
chr5 (752-818)||(2673889-2673955)
chr5 (733-834)||(7505108-7505210)
chr5 (733-775)||(31154688-31154730)
chr5 (741-827)||(31691292-31691378)
chr5 (733-775)||(36895050-36895092)
chr5 (952-1009)||(40888006-40888064)
chr5 (741-794)||(780724-780777)
chr5 (733-782)||(37067843-37067892)
chr5 (734-827)||(37944616-37944709)
[»] scaffold0113 (1 HSPs)
scaffold0113 (734-834)||(40479-40579)
[»] chr7 (62 HSPs)
chr7 (975-1033)||(42221003-42221061)
chr7 (733-832)||(6847289-6847388)
chr7 (727-834)||(30138814-30138921)
chr7 (733-827)||(6455562-6455656)
chr7 (733-827)||(8447750-8447844)
chr7 (741-827)||(21586847-21586933)
chr7 (741-832)||(10095747-10095838)
chr7 (972-1027)||(45782707-45782761)
chr7 (741-827)||(41803743-41803829)
chr7 (750-827)||(23797381-23797458)
chr7 (733-818)||(28306328-28306413)
chr7 (952-1031)||(34828134-34828213)
chr7 (748-827)||(9555288-9555367)
chr7 (952-1033)||(5811204-5811285)
chr7 (741-827)||(11002349-11002435)
chr7 (733-827)||(26477194-26477288)
chr7 (733-827)||(26553634-26553728)
chr7 (733-795)||(31813424-31813486)
chr7 (741-827)||(34275224-34275310)
chr7 (952-1028)||(28307541-28307617)
chr7 (952-1032)||(30887769-30887849)
chr7 (981-1033)||(36346605-36346657)
chr7 (734-811)||(46495417-46495494)
chr7 (734-818)||(10414953-10415037)
chr7 (741-813)||(24280868-24280940)
chr7 (972-1028)||(26972249-26972304)
chr7 (952-1031)||(31148359-31148438)
chr7 (740-827)||(26385658-26385745)
chr7 (972-1027)||(34108516-34108570)
chr7 (749-827)||(3882580-3882658)
chr7 (733-834)||(2943238-2943339)
chr7 (734-827)||(4406112-4406205)
chr7 (976-1033)||(13108241-13108297)
chr7 (734-827)||(22106681-22106774)
chr7 (734-783)||(22281457-22281506)
chr7 (734-827)||(25079221-25079314)
chr7 (733-818)||(25814724-25814809)
chr7 (735-832)||(28321592-28321688)
chr7 (734-803)||(29498797-29498866)
chr7 (734-827)||(40529577-40529670)
chr7 (733-794)||(43130246-43130307)
chr7 (733-818)||(45985573-45985658)
chr7 (733-818)||(45989933-45990018)
chr7 (733-834)||(8282452-8282555)
chr7 (751-827)||(18113266-18113342)
chr7 (759-827)||(21096220-21096288)
chr7 (740-832)||(26904801-26904893)
chr7 (762-834)||(39136608-39136680)
chr7 (733-812)||(2456349-2456428)
chr7 (741-832)||(5084458-5084549)
chr7 (752-827)||(27242447-27242522)
chr7 (740-818)||(4089831-4089909)
chr7 (734-776)||(25079291-25079333)
chr7 (733-827)||(27242579-27242673)
chr7 (768-818)||(28949323-28949373)
chr7 (734-776)||(41872135-41872177)
chr7 (733-818)||(12274851-12274936)
chr7 (976-1025)||(15020373-15020421)
chr7 (785-834)||(25245208-25245257)
chr7 (749-834)||(31115638-31115723)
chr7 (734-831)||(34703472-34703569)
chr7 (734-831)||(40416935-40417032)
[»] scaffold0020 (1 HSPs)
scaffold0020 (733-827)||(139309-139403)
[»] scaffold0149 (1 HSPs)
scaffold0149 (751-827)||(24637-24713)
[»] scaffold0341 (2 HSPs)
scaffold0341 (733-803)||(2433-2503)
scaffold0341 (733-803)||(10088-10158)
[»] scaffold0065 (1 HSPs)
scaffold0065 (733-827)||(36887-36981)
[»] scaffold0001 (1 HSPs)
scaffold0001 (742-795)||(438223-438276)
[»] scaffold0026 (1 HSPs)
scaffold0026 (733-827)||(88889-88981)
[»] scaffold1476 (1 HSPs)
scaffold1476 (753-827)||(693-766)
[»] scaffold0050 (1 HSPs)
scaffold0050 (734-827)||(6227-6320)
[»] scaffold0047 (1 HSPs)
scaffold0047 (734-827)||(61196-61288)
[»] scaffold0062 (1 HSPs)
scaffold0062 (952-1033)||(6787-6869)
[»] scaffold0181 (1 HSPs)
scaffold0181 (733-802)||(10625-10694)
[»] scaffold0043 (1 HSPs)
scaffold0043 (996-1033)||(87203-87239)
[»] scaffold0039 (1 HSPs)
scaffold0039 (734-783)||(54402-54451)


Alignment Details
Target: chr1 (Bit Score: 325; Significance: 0; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 8 - 440
Target Start/End: Complemental strand, 33289843 - 33289411
Alignment:
Q  8 gaaacaacactagcaatcctgaaaaagctctcaaactattcatgggttgcaaaaggagtgcttactctttctgcttttgctattgaatatggagagttct 107  Q
    |||||||||||| ||||||||||||||||||||||| ||| |||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  33289843 gaaacaacactaacaatcctgaaaaagctctcaaacaatttatgggttgaaaaaggagtgctaactctttctgcttttgctattgaatatggtgagttct 33289744  T
Q  108 ggaatctatcacaacatctaccaacacaaccacttgtcaaatcattagccataatgaaaagagtgcctcaactcaccaagcctgaagcactgaaaaaata 207  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |    
T  33289743 ggaatctatcacaacatctaccaacagaaccacttgccaaatcattagccataatgaaaagagtgcctcaactcaccaaaactgaagcactgaaaaaaca 33289644  T
Q  208 ttgcaatgatattttggagctcaacaatttaatcacggcaacatggcaagtgattgaaatcatcattgagttggaaagactcgccacatataatgacatc 307  Q
    | ||||||| |||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||  | ||  | ||||||||    
T  33289643 tcgcaatgaaattttggagctcaacaatttgatcaaggcaacatggaaagtgattgaaatcatcattgagttggaaagactcaactcacttcatgacatc 33289544  T
Q  308 aagaaagtgccagctcttgcactagcattggaagaattcccggttgatgtgttttgggttattaacaccattgttgcaattgttactcagtttgaatgta 407  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||| ||||||||     
T  33289543 aagaaagtgccagctcttgcactagcattggaagaattcccggttgatgtgttttgggttatcatcaccattgttacaattgttactcagattgaatgtc 33289444  T
Q  408 tcactactgattcgtaagtttttaagcctagat 440  Q
    |||||||||||||||||||||||||||||||||    
T  33289443 tcactactgattcgtaagtttttaagcctagat 33289411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 222; E-Value: 1e-121
Query Start/End: Original strand, 495 - 834
Target Start/End: Complemental strand, 33289345 - 33289001
Alignment:
Q  495 tataaagaacttactcatattttttattttcaggaattcaaggcagaacttgtctcaatttcgtcttaagattagcatcataatcaacaaactgacgaac 594  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||| ||||||||    
T  33289345 tataaagaacttactcatattttttattgtcaggaattcaaggcagaagttgtctcaatttggtcataagattagcatcataatcaacaaattgacgaac 33289246  T
Q  595 catgtgacagaatgcactacagctattggtaattattttaccacatactctctcgagtcctatatagaagaagattt-----nnnnnnnnntatattaat 689  Q
    |||||| || ||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||               | || |||    
T  33289245 catgtggcacaatgcactatatatattggtaattattttaccacatactctctcgagtcctatatagaagaagatttaaaaaaaaaataaaaaaataaat 33289146  T
Q  690 taatcatatgattttgtttactgtatacacctttcactcaccgttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaacttta 789  Q
    |||||||||||||||||||||  |||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  33289145 taatcatatgattttgtttaccatatacacctttcactcactgttataaacaaagatctacattttagatttatttaattaatgatgcatatgaacttta 33289046  T
Q  790 ttataggccacataaatcatttaatgaattaatctaaattgttga 834  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  33289045 ttataggccacataaatcatttaatgaatgaatctaaattgttga 33289001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 9 - 428
Target Start/End: Original strand, 33139016 - 33139435
Alignment:
Q  9 aaacaacactagcaatcctgaaaaagctctcaaactattcatgggttgcaaaaggagtgcttactctttctgcttttgctattgaatatggagagttctg 108  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |  |||| ||||||||||||||    
T  33139016 aaacaacactagcaatcctaaaaaagctgtcaaactattcatgggttgcaaaaggagtgcttactctttctgctttttcccttgagtatggagagttctg 33139115  T
Q  109 gaatctatcacaacatctaccaacacaaccacttgtcaaatcattagccataatgaaaagagtgcctcaactcaccaagcctgaagcactgaaaaaatat 208  Q
    |    |||||||  ||||||||||| ||||||||| ||||||| ||| |||||| || ||||| ||||||||  | ||||| |||||| |||||||| ||    
T  33139116 gctgttatcacagaatctaccaacagaaccacttgccaaatcactaggcataatcaagagagttcctcaactttcaaagccggaagcattgaaaaaacat 33139215  T
Q  209 tgcaatgatattttggagctcaacaatttaatcacggcaacatggcaagtgattgaaatcatcattgagttggaaagactcgccacatataatgacatca 308  Q
     ||||||| |||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||  | |   | |||||||||    
T  33139216 cgcaatgaaattttggagctcaacaatttgatcaaggcaacatggcaagtcattgaaatcatcattgagttggaaagactcaactcgcgtcatgacatca 33139315  T
Q  309 agaaagtgccagctcttgcactagcattggaagaattcccggttgatgtgttttgggttattaacaccattgttgcaattgttactcagtttgaatgtat 408  Q
    || |||| ||||| ||||||| ||| |||||| ||||||| |||||||| | ||||||||| | |||||||||||||||||||||||||||||||||| |    
T  33139316 aggaagttccagcccttgcaccagctttggaacaattccctgttgatgtatattgggttatcatcaccattgttgcaattgttactcagtttgaatgtct 33139415  T
Q  409 cactactgattcgtaagttt 428  Q
    ||| ||| ||||||||||||    
T  33139416 caccactaattcgtaagttt 33139435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 9 - 428
Target Start/End: Original strand, 33180256 - 33180675
Alignment:
Q  9 aaacaacactagcaatcctgaaaaagctctcaaactattcatgggttgcaaaaggagtgcttactctttctgcttttgctattgaatatggagagttctg 108  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||| || |||||    
T  33180256 aaacaacactagcaatcttgaacaagctgtcaaactattcatgggttgcaaaaggagttctcactctttctgcttttgctcttgaatatggtgacttctg 33180355  T
Q  109 gaatctatcacaacatctaccaacacaaccacttgtcaaatcattagccataatgaaaagagtgcctcaactcaccaagcctgaagcactgaaaaaatat 208  Q
    |   ||||||||  ||||||||||| ||||||||| |||||| || ||||||||||| |||||||||||||||||||| |||||| | || |||||| |     
T  33180356 gctgctatcacagtatctaccaacagaaccacttgccaaatctttggccataatgaagagagtgcctcaactcaccaaacctgaatcgctcaaaaaacac 33180455  T
Q  209 tgcaatgatattttggagctcaacaatttaatcacggcaacatggcaagtgattgaaatcatcattgagttggaaagactcgccacatataatgacatca 308  Q
     || |||  ||||||||| | |||||| | ||||  |||||||||||||||||||| |||||||||||||| ||||| |||  | ||  | | |||||||    
T  33180456 cgctatgcaattttggaggttaacaatctgatcaaagcaacatggcaagtgattgatatcatcattgagttagaaaggctcaactcacgtcacgacatca 33180555  T
Q  309 agaaagtgccagctcttgcactagcattggaagaattcccggttgatgtgttttgggttattaacaccattgttgcaattgttactcagtttgaatgtat 408  Q
    || |||||||||||||||| | ||| |||||  ||||||| |||||||| | ||||||||| ||||||||||||||||||||||||||| |||||||  |    
T  33180556 aggaagtgccagctcttgctccagctttggagcaattcccagttgatgtatattgggttatcaacaccattgttgcaattgttactcagattgaatgcct 33180655  T
Q  409 cactactgattcgtaagttt 428  Q
    ||||||||||||||||||||    
T  33180656 cactactgattcgtaagttt 33180675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 166; E-Value: 3e-88
Query Start/End: Original strand, 10 - 427
Target Start/End: Original strand, 33157442 - 33157859
Alignment:
Q  10 aacaacactagcaatcctgaaaaagctctcaaactattcatgggttgcaaaaggagtgcttactctttctgcttttgctattgaatatggagagttctgg 109  Q
    ||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||| || |||||||||||||||||| |||| ||||||||||| |||    
T  33157442 aacaacactagcaatcctgaacaagctgtcaaactactcatgggttgcaaaaggagttctcactctttctgcttttgctcttgagtatggagagttttgg 33157541  T
Q  110 aatctatcacaacatctaccaacacaaccacttgtcaaatcattagccataatgaaaagagtgcctcaactcaccaagcctgaagcactgaaaaaatatt 209  Q
       ||||||||  ||||||||||| ||||||||| ||||||||||||||| ||||| ||||| |||||||||||||| ||||||   || |||||| |      
T  33157542 ctgctatcacagtatctaccaacagaaccacttgccaaatcattagccattatgaagagagtacctcaactcaccaaacctgaattgctcaaaaaacacc 33157641  T
Q  210 gcaatgatattttggagctcaacaatttaatcacggcaacatggcaagtgattgaaatcatcattgagttggaaagactcgccacatataatgacatcaa 309  Q
    || |||   |||||||| | |||||| | |||| |||||||| |||| ||||||| |||||||||| |||||||||||||  | |   | |||| |||||    
T  33157642 gctatgcagttttggaggttaacaatctgatcaaggcaacatcgcaactgattgatatcatcattgcgttggaaagactcaactcgcgtcatgatatcaa 33157741  T
Q  310 gaaagtgccagctcttgcactagcattggaagaattcccggttgatgtgttttgggttattaacaccattgttgcaattgttactcagtttgaatgtatc 409  Q
    | |||||||||||||||| | ||| |||||  ||||||| |||||||| | ||||||||| | ||||||||||||||||||||||||| |||||||  |     
T  33157742 ggaagtgccagctcttgctccagctttggagcaattcccagttgatgtctattgggttatcatcaccattgttgcaattgttactcagattgaatgcctt 33157841  T
Q  410 actactgattcgtaagtt 427  Q
    || |||||||||||||||    
T  33157842 acaactgattcgtaagtt 33157859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 733 - 832
Target Start/End: Original strand, 50503196 - 50503295
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    ||||||||| |||| || |||||||||||||||||||||||||| |||||| ||||||||||| ||||||| |||||||||| ||| ||| |||| ||||    
T  50503196 ttataaacacaaatttatattttagatttattcaattaatgatgtatatgatctttattatagaccacatacatcatttaataaatgaatataaaatgtt 50503295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 733 - 834
Target Start/End: Complemental strand, 14967352 - 14967251
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    |||||| |||||||| |||||||||||| ||||| | ||||||| || ||| ||||||||||||||||||| |||||||||||||| ||| |||| ||||    
T  14967352 ttataagcaaaaatcaacattttagattcattcattaaatgatgtatgtgatctttattataggccacatacatcatttaatgaataaatgtaaaatgtt 14967253  T
Q  833 ga 834  Q
    ||    
T  14967252 ga 14967251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 733 - 827
Target Start/End: Original strand, 1597202 - 1597296
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||||| ||||| ||||||||| ||||||||||||||||||| |||||| ||||||||| | ||| ||| |||||||||||||| ||| ||||    
T  1597202 ttataaacgaaaatatacattttaaatttattcaattaatgatgtatatgatctttattatcgaccatatatatcatttaatgaataaatttaaa 1597296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 733 - 827
Target Start/End: Original strand, 8338688 - 8338782
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||||||||||||||||||| ||||| ||||||||||| |||| ||||||||||| ||||||| |||||| ||| ||| || |||||    
T  8338688 ttataagcaaaaatctacattttagattcattcatttaatgatgcacatgatctttattatagaccacatacatcattaaataaatgaacctaaa 8338782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 733 - 827
Target Start/End: Complemental strand, 34954023 - 34953929
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||||| || |||||||||| ||||||||||||||| |||||  ||||||||||| ||||||| |||||||||||||| ||| ||||    
T  34954023 ttataagcaaaaatttatattttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaatgaatttaaa 34953929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 733 - 827
Target Start/End: Complemental strand, 45115297 - 45115203
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||||||||||||||||||| ||||| ||||||||||| |||  ||||||||||| ||||||| |||||| ||||||| || |||||    
T  45115297 ttataagcaaaaatctacattttagattcattcatttaatgatgcacatggtctttattatagaccacatatatcattaaatgaataaacctaaa 45115203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 733 - 834
Target Start/End: Original strand, 50550132 - 50550233
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    ||||||| ||||||| ||||| || ||| ||||||||||| ||| |||||| |||||||||||  |||||| |||||||||||||| |||||||| ||||    
T  50550132 ttataaataaaaatcaacattataaattcattcaattaataatgtatatgatctttattatagatcacatacatcatttaatgaatgaatctaaaatgtt 50550231  T
Q  833 ga 834  Q
    ||    
T  50550232 ga 50550233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 733 - 832
Target Start/End: Original strand, 3549792 - 3549891
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    |||||| ||||||||||||||||||||| ||||||||||||||  ||| |  ||||||||||| ||||||| || ||||||||||| ||| |||| ||||    
T  3549792 ttataagcaaaaatctacattttagattcattcaattaatgatatatacggtctttattatagaccacatacattatttaatgaatgaatttaaaatgtt 3549891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 736 - 827
Target Start/End: Original strand, 39362825 - 39362916
Alignment:
Q  736 taaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||||| | |||||||||  ||||||||||||||||||| |||||| ||||||||||| |||||||  ||||||||| ||| ||||||||    
T  39362825 taaacaaagaactacattttttatttattcaattaatgatgtatatgatctttattatagaccacatacttcatttaataaatgaatctaaa 39362916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 952 - 1027
Target Start/End: Complemental strand, 34307260 - 34307185
Alignment:
Q  952 gcaaaaacactgaa-gaggaaatgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatggg 1027  Q
    ||||||||| |||| || || ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  34307260 gcaaaaacattgaaagaagatatgaaaaagggtgatgatatgatgtaaaattact-aaaatacccctaacacatggg 34307185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 748 - 827
Target Start/End: Complemental strand, 23575430 - 23575351
Alignment:
Q  748 tacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||||||| || ||||| |||||||||||||||| ||||||||||| ||||||| |||||| ||||||| || |||||    
T  23575430 tacattttaggttcattcatttaatgatgcatatgatctttattatagaccacatacatcattaaatgaatgaacctaaa 23575351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 713 - 827
Target Start/End: Complemental strand, 41007824 - 41007710
Alignment:
Q  713 tatacacctttcactcaccgttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcattta 812  Q
    ||||||||||||| | ||  |||||| ||||| || |||||||||||| ||||| | ||||||| || ||  ||||||||||| ||||||| ||||||||    
T  41007824 tatacacctttcagttactattataagcaaaattcaacattttagattcattcattaaatgatgtatgtggtctttattatagaccacatacatcattta 41007725  T
Q  813 atgaattaatctaaa 827  Q
    |||||| ||| ||||    
T  41007724 atgaataaatttaaa 41007710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 733 - 823
Target Start/End: Original strand, 42761466 - 42761556
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatc 823  Q
    |||||| ||||| | ||||||||||||| ||||||||||||||| || ||| ||||||||||| | | ||| |||||||||||||| ||||    
T  42761466 ttataagcaaaactttacattttagattcattcaattaatgatgtatctgatctttattatagactatatacatcatttaatgaatgaatc 42761556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 733 - 834
Target Start/End: Complemental strand, 2492603 - 2492502
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    |||||| ||||| | ||||||||||||  ||||||| ||||||| |||||| ||||||||||  ||||||| |||||| | ||||| |||||||| ||||    
T  2492603 ttataagcaaaagtttacattttagatccattcaataaatgatgtatatgatctttattataaaccacatacatcattcagtgaatgaatctaaaatgtt 2492504  T
Q  833 ga 834  Q
    ||    
T  2492503 ga 2492502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 734 - 827
Target Start/End: Original strand, 6283549 - 6283642
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||| |||||| ||||||||||| || ||||| ||||||||||| |||  ||||||||||| ||||||| |||||| ||||||| || |||||    
T  6283549 tataagcaaaaaactacattttaggttcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaatgaatgaacctaaa 6283642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 733 - 818
Target Start/End: Complemental strand, 14891865 - 14891780
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaat 818  Q
    |||||| ||||||| || ||||||||||||| |||| ||||||| |||||  ||||||||||| ||| ||| ||||||||||||||    
T  14891865 ttataagcaaaaatttaaattttagatttatccaataaatgatgtatatggtctttattatagaccatatacatcatttaatgaat 14891780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 733 - 818
Target Start/End: Complemental strand, 33939424 - 33939339
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaat 818  Q
    |||||| ||||| | ||||||||||||| ||||| ||||||||||| |||  ||||||||||| ||||||| |||||| |||||||    
T  33939424 ttataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaatgaat 33939339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 734 - 827
Target Start/End: Complemental strand, 48083630 - 48083537
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||| ||||| | || |||||||||| ||||||||||| | | |||||| ||||||||||| ||||||| |||||||||||||| || |||||    
T  48083630 tataagcaaaactttatattttagattcattcaattaataacgtatatgatctttattatagaccacatacatcatttaatgaatgaacctaaa 48083537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 734 - 810
Target Start/End: Original strand, 24115765 - 24115841
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatt 810  Q
    ||||| |||||| ||||||||||| |||||||| ||||||||||| |||| ||||||||||| ||| ||| ||||||    
T  24115765 tataagcaaaaaactacattttaggtttattcatttaatgatgcacatgatctttattatagaccatatacatcatt 24115841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 734 - 818
Target Start/End: Original strand, 41161479 - 41161563
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaat 818  Q
    ||||||||||||  |||||||||  || ||||| ||||||||||| |||| ||||||||||| ||||||| |||||| |||||||    
T  41161479 tataaacaaaaaattacattttaagttcattcatttaatgatgcacatgatctttattatagaccacatacatcattaaatgaat 41161563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 751 - 834
Target Start/End: Original strand, 47969516 - 47969599
Alignment:
Q  751 attttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgttga 834  Q
    ||||||||||  || ||||||||||| ||||||  |||||||||| |||||||||| ||||||||||  |||||||||| ||||    
T  47969516 attttagattcgtttaattaatgatgtatatgatatttattatagaccacataaattatttaatgaaagaatctaaattattga 47969599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 733 - 803
Target Start/End: Original strand, 6508410 - 6508480
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacata 803  Q
    |||||| ||||||| ||||| ||||||| ||||| ||||||||||| |||| ||||||||||| |||||||    
T  6508410 ttataagcaaaaatttacatcttagattcattcatttaatgatgcacatgatctttattatagaccacata 6508480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 733 - 795
Target Start/End: Complemental strand, 10832121 - 10832059
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattatag 795  Q
    ||||||||||||||||||||||||| || |||||||||||| |  |||||| |||||||||||    
T  10832121 ttataaacaaaaatctacattttaggttcattcaattaatggtatatatgatctttattatag 10832059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 741 - 827
Target Start/End: Complemental strand, 31130932 - 31130846
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||| ||||||||||| || ||||| ||||||||||| |||| ||||||||||| ||| ||| |||||| ||||||| || |||||    
T  31130932 aaaaaactacattttaggttcattcatttaatgatgcacatgatctttattatagaccatatacatcattaaatgaatgaacctaaa 31130846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 733 - 827
Target Start/End: Complemental strand, 31998316 - 31998222
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||| | | ||||||||||| ||||| ||||||||| |||||| |||||||||||  |||||| |||||||||| ||| ||| ||||    
T  31998316 ttataagcaaaactttgcattttagattcattcatttaatgatgtatatgatctttattatagatcacatacatcatttaataaatgaatataaa 31998222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 750 - 827
Target Start/End: Complemental strand, 26674296 - 26674219
Alignment:
Q  750 cattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||| ||| ||||||||||||||| |||||  ||||||||||| ||||||| || ||||||||||| ||| ||||    
T  26674296 cattttaaattcattcaattaatgatgtatatggtctttattatagaccacatacataatttaatgaataaatataaa 26674219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 733 - 818
Target Start/End: Original strand, 31699000 - 31699085
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaat 818  Q
    |||||| ||||||| |||||| |||||| ||||| ||||||||||| |||| |||||||||||  |||||| | |||| |||||||    
T  31699000 ttataagcaaaaatatacattgtagattcattcatttaatgatgcacatgatctttattatagagcacatacaccattaaatgaat 31699085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 741 - 834
Target Start/End: Original strand, 33765808 - 33765901
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgttga 834  Q
    |||||| || |||||| |||  || ||||||||||| |||||  ||||||||||| ||||||| |||||||||| ||| |||||||| ||||||    
T  33765808 aaaaatttatattttaaattcgtttaattaatgatgtatatggtctttattatagaccacatacatcatttaataaatgaatctaaaatgttga 33765901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 734 - 827
Target Start/End: Complemental strand, 36040272 - 36040179
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||| |||||| ||||||||||| || ||||| ||||||||||| ||   ||||||||||| ||||||| |||||| ||||||| || |||||    
T  36040272 tataagcaaaaaactacattttaggttcattcatttaatgatgcacatagtctttattatagaccacatacatcattaaatgaatgaacctaaa 36040179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 733 - 810
Target Start/End: Original strand, 44349943 - 44350020
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatt 810  Q
    |||||||||||| | || |||||||||| ||||| ||||||||||| |||  ||||||||||| ||||||| ||||||    
T  44349943 ttataaacaaaagtttatattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcatt 44350020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 751 - 827
Target Start/End: Complemental strand, 9590853 - 9590777
Alignment:
Q  751 attttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||| ||||||||||||||| |||||| ||||||||||  ||||||| ||  |||||||||| ||||||||    
T  9590853 attttaaattcattcaattaatgatgtatatgatctttattatataccacatacattgtttaatgaatgaatctaaa 9590777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 734 - 814
Target Start/End: Complemental strand, 11324559 - 11324479
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaat 814  Q
    |||||| ||||||  |||||||| ||| ||||||||||||||| |||||  ||||||||||| | ||||| ||||||||||    
T  11324559 tataaataaaaattaacattttaaattcattcaattaatgatgtatatggtctttattatagactacatacatcatttaat 11324479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 734 - 814
Target Start/End: Complemental strand, 11482580 - 11482500
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaat 814  Q
    |||||| ||||||  |||||||| ||| ||||||||||||||| |||||  ||||||||||| | ||||| ||||||||||    
T  11482580 tataaataaaaattaacattttaaattcattcaattaatgatgtatatggtctttattatagactacatacatcatttaat 11482500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 752 - 827
Target Start/End: Complemental strand, 14958789 - 14958714
Alignment:
Q  752 ttttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||||||||||||| |||||||| | ||| ||||||| ||| | ||||| |||||||| ||||| ||||||||    
T  14958789 ttttagatttattcaataaatgatgcgtgtgatctttattgtagacaacatacatcatttattgaatgaatctaaa 14958714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 727 - 834
Target Start/End: Original strand, 17342354 - 17342461
Alignment:
Q  727 tcaccgttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaa 826  Q
    |||| ||||||| ||||||| ||||||||| ||||||| | ||||||||| |  ||| |||||  |||  ||| ||| ||||||||||||| ||||||||    
T  17342354 tcactgttataagcaaaaatttacattttacatttatttacttaatgatgtacgtgatctttaaaataaaccaaatatatcatttaatgaaataatctaa 17342453  T
Q  827 attgttga 834  Q
    | ||||||    
T  17342454 aatgttga 17342461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 733 - 832
Target Start/End: Complemental strand, 18607212 - 18607113
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    ||||||||||||||||| |||||| ||| ||||||||||| ||  |||| |  |||||||||  |||| || || ||||||||||| |||||||| ||||    
T  18607212 ttataaacaaaaatctatattttaaattcattcaattaataatatatataatttttattataatccacgtacattatttaatgaataaatctaaaatgtt 18607113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 733 - 827
Target Start/End: Complemental strand, 31889170 - 31889076
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||||| ||| ||||| ||| ||||| ||||||||||| |||  ||||||||||| ||||||| |||||| ||| ||| || |||||    
T  31889170 ttataagcaaaaatttactttttacattcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaataaatgaacctaaa 31889076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 713 - 827
Target Start/End: Original strand, 43728179 - 43728293
Alignment:
Q  713 tatacacctttcactcaccgttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcattta 812  Q
    ||||||||| ||| ||||  ||||||||||||||||| ||||||| || ||| ||||||||||  |||| | ||||||||||  ||||| | |||||| |    
T  43728179 tatacacctctcagtcactattataaacaaaaatctatattttaggttaatttaattaatgatatatataatctttattataaaccacacacatcattaa 43728278  T
Q  813 atgaattaatctaaa 827  Q
     | ||| ||||||||    
T  43728279 tttaatgaatctaaa 43728293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 741 - 827
Target Start/End: Original strand, 46829893 - 46829979
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||| |||||||||||||||||||| | ||||||  || ||  ||||||||||  |||| || |||||||||||||| ||||||||    
T  46829893 aaaaaactacattttagatttattcattaaatgatctatgtggtctttattataaaccacgtacatcatttaatgaataaatctaaa 46829979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 741 - 827
Target Start/End: Original strand, 47023211 - 47023297
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||| ||||||||||| |||||||| ||||| ||||| |||  ||||||||||| ||||||| |||||| ||| ||| || |||||    
T  47023211 aaaaaactacattttaggtttattcatttaataatgcacatggtctttattatagaccacatacatcattaaataaatgaacctaaa 47023297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 733 - 818
Target Start/End: Complemental strand, 14365492 - 14365407
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaat 818  Q
    |||||||||||||| || |||||| ||| ||| ||||||||||  |||||| |||| |||||| |||| || | ||||||||||||    
T  14365492 ttataaacaaaaatatatattttatattcatttaattaatgatatatatgatcttttttatagaccacgtacaccatttaatgaat 14365407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 734 - 827
Target Start/End: Complemental strand, 28725592 - 28725499
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||| |||||| ||||||||||| || ||| | ||||||||||| |||| |||||||||||   ||||| |||||| ||||||| || |||||    
T  28725592 tataagcaaaaaactacattttaggttcatttatttaatgatgcacatgatctttattatagattacatacatcattaaatgaatgaacctaaa 28725499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 741 - 810
Target Start/End: Complemental strand, 31130813 - 31130744
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatt 810  Q
    ||||| ||||||||||| || ||||  ||||||||||| |||| ||||||||||| ||||||| ||||||    
T  31130813 aaaaaactacattttaggttcattcgtttaatgatgcacatgatctttattatagaccacatacatcatt 31130744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 738 - 827
Target Start/End: Original strand, 50154325 - 50154413
Alignment:
Q  738 aacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||| |||| |||||||||| ||| ||||||| ||| ||||||   |||||||||  |||||| |||||||||||||| ||||||||    
T  50154325 aacaaaagtcta-attttagattcatttaattaataatgtatatgattattattatagatcacatatatcatttaatgaatgaatctaaa 50154413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 733 - 793
Target Start/End: Original strand, 8455066 - 8455126
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattat 793  Q
    ||||||||||||||||||||||||| || |||||||||| |||  |||| | |||||||||    
T  8455066 ttataaacaaaaatctacattttaggttcattcaattaacgatatatataatctttattat 8455126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 748 - 832
Target Start/End: Complemental strand, 13877097 - 13877013
Alignment:
Q  748 tacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    |||||||||||||||||||||  || ||| |||||| ||||||||||   || ||| |||||||||||||| ||| |||| ||||    
T  13877097 tacattttagatttattcaatctataatgtatatgatctttattatatatcatatacatcatttaatgaataaatttaaaatgtt 13877013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 734 - 834
Target Start/End: Complemental strand, 27068906 - 27068806
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgttg 833  Q
    ||||||||||||||||||||||| ||  ||| ||||||| ||| |||||   ||||| ||||| |||| | || ||||||| ||| |||||||| |||||    
T  27068906 tataaacaaaaatctacattttaaatccattgaattaataatgtatatggtatttatgataggtcacaaacattatttaataaataaatctaaaatgttg 27068807  T
Q  834 a 834  Q
    |    
T  27068806 a 27068806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 734 - 834
Target Start/End: Original strand, 41007691 - 41007791
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgttg 833  Q
    ||||| |||||||| | |||||| ||||||||| | ||||||| || ||  || || || || ||||||| |||||||||||||| |||||||| |||||    
T  41007691 tataagcaaaaatcaatattttaaatttattcattaaatgatgtatgtggtctataataaagaccacatacatcatttaatgaatgaatctaaaatgttg 41007790  T
Q  834 a 834  Q
    |    
T  41007791 a 41007791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 741 - 813
Target Start/End: Complemental strand, 50755296 - 50755224
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaa 813  Q
    ||||||||||||||||| || ||| ||||||||||| |||||| |||||||| |  | ||||| |||||||||    
T  50755296 aaaaatctacattttaggttcatttaattaatgatgtatatgatctttattacatacaacatacatcatttaa 50755224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 952 - 1033
Target Start/End: Original strand, 2509093 - 2509175
Alignment:
Q  952 gcaaaaacactgaa-gaggaaatgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatg-gggtgtac 1033  Q
    ||||||||| |||| || || ||||||| ||||| |||||||||||||||||||| |||||| |||||| ||||| ||||||||    
T  2509093 gcaaaaacattgaaagaagagatgaaaaagggtggtgatatgatgtaaaattact-aaaatatccctaatacatgagggtgtac 2509175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 752 - 827
Target Start/End: Original strand, 8984220 - 8984295
Alignment:
Q  752 ttttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||||| ||||||| ||||||| || ||  ||||||| ||| | |||||||||||||| ||||| ||||||||    
T  8984220 ttttagattcattcaataaatgatgtatgtggtctttattgtagacaacataaatcatttattgaatgaatctaaa 8984295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 735 - 834
Target Start/End: Original strand, 14967240 - 14967339
Alignment:
Q  735 ataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgttga 834  Q
    |||| |||||||| |||||||| ||||||||| | ||||||| || ||  || || || ||  |||||| |||||||||||||| |||||||| ||||||    
T  14967240 ataagcaaaaatcaacattttacatttattcattaaatgatgtatgtggcctataataaagatcacatacatcatttaatgaatgaatctaaaatgttga 14967339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 744 - 827
Target Start/End: Original strand, 31325834 - 31325917
Alignment:
Q  744 aatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| |||||||||||||||||||||| ||| || ||  ||||||| ||| | ||||| | |||||| ||||| ||||||||    
T  31325834 aatctatattttagatttattcaattaataatgtatgtgttctttattgtagacaacatataacatttattgaatgaatctaaa 31325917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 899 - 941
Target Start/End: Complemental strand, 33288928 - 33288885
Alignment:
Q  899 attctagttctagagtttaatgac-aaactcacacatatcaagt 941  Q
    |||||||||||||||||||||||| |||||||||||||| ||||    
T  33288928 attctagttctagagtttaatgacgaaactcacacatattaagt 33288885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 734 - 768
Target Start/End: Original strand, 50878354 - 50878388
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaat 768  Q
    ||||||||||||| |||||||||||||||||||||    
T  50878354 tataaacaaaaatttacattttagatttattcaat 50878388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 758 - 827
Target Start/End: Complemental strand, 8397092 - 8397023
Alignment:
Q  758 atttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||||||||||||||  |||| | |||||||||||  |||||| |||||||||| ||| ||| ||||    
T  8397092 atttattcaattaatgatatatataatctttattatagatcacatatatcatttaataaataaatttaaa 8397023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 972 - 1033
Target Start/End: Complemental strand, 19258773 - 19258713
Alignment:
Q  972 atgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatggggtgtac 1033  Q
    ||||||||||||| |||| |||||| |||||| | ||||||  |||||||||||||||||||    
T  19258773 atgaaaaggggtggtgatgtgatgtgaaatta-ttaaaatattcctaacacatggggtgtac 19258713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 742 - 827
Target Start/End: Complemental strand, 20621348 - 20621263
Alignment:
Q  742 aaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||| ||||||||||||| ||| |||||| |||  || ||| | ||||||||| ||||||| ||| |||| ||||| ||||||||    
T  20621348 aaaatatacattttagattcattgaattaacgatatatgtgatcattattatagaccacatacatcgtttattgaatgaatctaaa 20621263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 751 - 828
Target Start/End: Original strand, 29663697 - 29663774
Alignment:
Q  751 attttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaat 828  Q
    |||||||||| ||||| | ||||||   ||||  ||||| ||||| ||||||| |||||||||||||| |||||||||    
T  29663697 attttagattcattcattaaatgatatgtatggtctttactatagaccacatatatcatttaatgaatgaatctaaat 29663774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 952 - 1028
Target Start/End: Complemental strand, 39249985 - 39249909
Alignment:
Q  952 gcaaaaacactgaa-gaggaaatgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatgggg 1028  Q
    ||||||||| |||| || || ||||||| || || |||||| ||||||||||||| ||||||||||||| ||||||||    
T  39249985 gcaaaaacattgaaagaagagatgaaaaaggatggtgatataatgtaaaattact-aaaatacccctaatacatgggg 39249909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 733 - 790
Target Start/End: Complemental strand, 41970915 - 41970858
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttat 790  Q
    ||||||| ||||||  | ||||||||||||||||||| |||||| |||||| ||||||    
T  41970915 ttataaagaaaaataaatattttagatttattcaattgatgatgtatatgacctttat 41970858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 972 - 1005
Target Start/End: Complemental strand, 46901836 - 46901803
Alignment:
Q  972 atgaaaaggggtgatgatatgatgtaaaattact 1005  Q
    ||||||| ||||||||||||||||||||||||||    
T  46901836 atgaaaaagggtgatgatatgatgtaaaattact 46901803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 8e-27; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 740 - 834
Target Start/End: Complemental strand, 38465909 - 38465815
Alignment:
Q  740 caaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgttga 834  Q
    ||||||||||||||||||||| ||||||||||||||| |||||  ||||||||| | ||||||| ||||||||||||||||||||||| ||||||    
T  38465909 caaaaatctacattttagattcattcaattaatgatgtatatggtctttattatggaccacatacatcatttaatgaattaatctaaaatgttga 38465815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 733 - 834
Target Start/End: Original strand, 32630419 - 32630520
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    ||||||||||||||||||||||| |||| ||||||||||||||| |||||  ||||||||||| | ||||| |||||||||||||| |||||||| ||||    
T  32630419 ttataaacaaaaatctacattttggattcattcaattaatgatgtatatggtctttattatagactacatacatcatttaatgaataaatctaaaatgtt 32630518  T
Q  833 ga 834  Q
    ||    
T  32630519 ga 32630520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 733 - 832
Target Start/End: Complemental strand, 15119904 - 15119805
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    |||||| ||||||||||||||||||||||||||| ||||||||| ||||   ||||||||||| ||||||| |||||||||||||| |||||||| ||||    
T  15119904 ttataagcaaaaatctacattttagatttattcatttaatgatgtatattgtctttattatagaccacatacatcatttaatgaatgaatctaaaatgtt 15119805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 733 - 834
Target Start/End: Original strand, 1961322 - 1961423
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    |||||| ||||||| |||||||||||||| || ||||||||||| |||||  ||||||||||| ||||||| |||||||||||||| |||||||| ||||    
T  1961322 ttataagcaaaaatttacattttagatttgtttaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaatgaatctaaaatgtt 1961421  T
Q  833 ga 834  Q
    ||    
T  1961422 ga 1961423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 733 - 827
Target Start/End: Original strand, 8740532 - 8740626
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||||||||||||||||||| ||||| ||||||||||| |||  ||||||||||| ||||||| |||||| ||||||| || |||||    
T  8740532 ttataagcaaaaatctacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaatgaatgaacctaaa 8740626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 733 - 827
Target Start/End: Complemental strand, 26003562 - 26003468
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||||||||||||||||||| ||||||||||||||| |||||  ||||||||||  | ||||| |||||||||||||| || |||||    
T  26003562 ttataagcaaaaatctacattttagattcattcaattaatgatgtatatggtctttattatatactacatacatcatttaatgaatgaacctaaa 26003468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 733 - 834
Target Start/End: Complemental strand, 15859678 - 15859577
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    |||||| |||||||||| |||||||||| ||||||||||||||| ||||||  |||||||||| | ||||| || ||||||||||| ||| | |||||||    
T  15859678 ttataagcaaaaatctatattttagattcattcaattaatgatgtatatgatatttattatagacaacatacattatttaatgaatgaatttgaattgtt 15859579  T
Q  833 ga 834  Q
    ||    
T  15859578 ga 15859577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 733 - 827
Target Start/End: Original strand, 43732151 - 43732245
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||||| ||||||||||||| ||||||||||||||| |||||  | |||| |||  ||||||| |||||||||||||| ||||||||    
T  43732151 ttataagcaaaaatatacattttagattcattcaattaatgatgaatatggtcattatcatataccacatacatcatttaatgaatgaatctaaa 43732245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 741 - 834
Target Start/End: Complemental strand, 43701473 - 43701380
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgttga 834  Q
    |||||||| ||||||||||||||||||||||||||| |||||   |||||| |||| || | | |||||||||||||| |||||||| ||||||    
T  43701473 aaaaatcttcattttagatttattcaattaatgatgtatatggtttttattgtaggtcatacacatcatttaatgaatgaatctaaaatgttga 43701380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 733 - 827
Target Start/End: Complemental strand, 38181887 - 38181793
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| |||||| |||||||||| ||| ||||||||||||||| ||||   ||||||| |||  |||||| |||||||||||||| ||||||||    
T  38181887 ttataagcaaaaaactacattttacattcattcaattaatgatgtatatagtctttattgtagatcacatacatcatttaatgaatgaatctaaa 38181793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 952 - 1028
Target Start/End: Original strand, 14573064 - 14573140
Alignment:
Q  952 gcaaaaacactgaa-gaggaaatgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatgggg 1028  Q
    ||||||||| |||| || || ||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14573064 gcaaaaacattgaaagaagagatggaaaagggtgatgatatgatgtaaaattact-aaaatacccctaacacatgggg 14573140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 750 - 827
Target Start/End: Original strand, 23377972 - 23378049
Alignment:
Q  750 cattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||||||| ||||||||||||||| |||||| ||||||| |||  |||||| |||||||||| ||| ||||||||    
T  23377972 cattttagattcattcaattaatgatgtatatgatctttattgtagatcacatacatcatttaataaatgaatctaaa 23378049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 733 - 818
Target Start/End: Complemental strand, 26234151 - 26234066
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaat 818  Q
    |||||| ||||| | ||||||||||||| ||||| ||||||||||| |||  ||||||||||| ||||||| |||||| |||||||    
T  26234151 ttataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaatgaat 26234066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 751 - 827
Target Start/End: Original strand, 2050121 - 2050197
Alignment:
Q  751 attttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||||||||||| | ||||||||| |||||| ||||||||||  ||||||| |||||||||| ||| ||||||||    
T  2050121 attttagatttatttatttaatgatgtatatgatctttattataaaccacatacatcatttaataaatgaatctaaa 2050197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 727 - 827
Target Start/End: Original strand, 8383192 - 8383292
Alignment:
Q  727 tcaccgttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaa 826  Q
    ||||| ||||||||||||||||| |||||||||| ||||| ||||| ||| | |||  |||||||||||  |||||| |||||| ||| ||| |||||||    
T  8383192 tcaccattataaacaaaaatctatattttagattcattcatttaataatgtacatggtctttattatagatcacatacatcattaaataaatgaatctaa 8383291  T
Q  827 a 827  Q
    |    
T  8383292 a 8383292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 755 - 827
Target Start/End: Complemental strand, 15916838 - 15916766
Alignment:
Q  755 tagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||||||||||||||||||| |||||| |||| |||||| | ||||| || ||||||||||| ||||||||    
T  15916838 tagatttattcaattaatgatgtatatgatctttgttatagactacatacattatttaatgaatgaatctaaa 15916766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 981 - 1033
Target Start/End: Original strand, 16089920 - 16089971
Alignment:
Q  981 ggtgatgatatgatgtaaaattactaaaaatacccctaacacatggggtgtac 1033  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  16089920 ggtggtgatatgatgtaaaattactaaaa-tacccctaacacatggggtgtac 16089971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 734 - 794
Target Start/End: Original strand, 20504257 - 20504317
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattata 794  Q
    ||||||||||||||||| |||||||| |||||||||||||||| |||| | ||||||||||    
T  20504257 tataaacaaaaatctactttttagatatattcaattaatgatgtatataatctttattata 20504317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 980 - 1028
Target Start/End: Complemental strand, 37498956 - 37498909
Alignment:
Q  980 gggtgatgatatgatgtaaaattactaaaaatacccctaacacatgggg 1028  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  37498956 gggtgatgatatgatgtaaaattact-aaaatacccctaacacatgggg 37498909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 749 - 832
Target Start/End: Original strand, 11726524 - 11726607
Alignment:
Q  749 acattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    |||||||||||| ||||||| ||||||| |||| | ||||||||| |  |||||| |||||||||||||| |||||||| ||||    
T  11726524 acattttagattcattcaatcaatgatgtatataatctttattatggatcacatacatcatttaatgaatgaatctaaaatgtt 11726607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 741 - 832
Target Start/End: Complemental strand, 38618514 - 38618423
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    |||||| ||||||||| ||| ||||||||||  ||| ||| || ||||||||||| ||||||| ||||||||| |||| |||||||| ||||    
T  38618514 aaaaatttacattttacattcattcaattaaaaatgtataagatctttattatagaccacatacatcatttaacgaatgaatctaaaatgtt 38618423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 952 - 1033
Target Start/End: Complemental strand, 3831019 - 3830938
Alignment:
Q  952 gcaaaaacactgaa-gaggaaatgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatggggtgtac 1033  Q
    ||||||||| |||| || || |||||||| |||||| || ||||||||||||||||| | |||||||||||||||||||||||    
T  3831019 gcaaaaacattgaaagaagagatgaaaagtggtgattatctgatgtaaaattactaata-tacccctaacacatggggtgtac 3830938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 952 - 1033
Target Start/End: Original strand, 33732638 - 33732719
Alignment:
Q  952 gcaaaaacactgaa-gaggaaatgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatggggtgtac 1033  Q
    ||||||||| |||| || || ||||||| ||||| |||||||||||||||||||| ||||||||||||| | |||||||||||    
T  33732638 gcaaaaacattgaaagaagagatgaaaaagggtggtgatatgatgtaaaattact-aaaatacccctaatatatggggtgtac 33732719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 751 - 817
Target Start/End: Original strand, 37195083 - 37195149
Alignment:
Q  751 attttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaa 817  Q
    |||||||||| | ||||||||||||| |||||  ||||||||||| ||||||| |||||||||||||    
T  37195083 attttagattcactcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaa 37195149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 975 - 1025
Target Start/End: Original strand, 44958206 - 44958255
Alignment:
Q  975 aaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatg 1025  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  44958206 aaaaagggtgatgatatgatgtaaaattact-aaaatacccctaacacatg 44958255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 733 - 834
Target Start/End: Complemental strand, 7079497 - 7079396
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    |||||| ||||||  || |||||||||| ||| ||||||||||| |||||  ||| ||||||| ||||||| ||||||||||| || ||| |||| ||||    
T  7079497 ttataagcaaaaacatatattttagattcatttaattaatgatgtatatggtcttaattatagaccacatatatcatttaatggatgaatttaaaatgtt 7079398  T
Q  833 ga 834  Q
    ||    
T  7079397 ga 7079396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 734 - 827
Target Start/End: Original strand, 19612955 - 19613048
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||| |||||||||| |||||||||| ||||| ||||||||||| ||    |||||||||| ||||||| |||||| ||||||| || |||||    
T  19612955 tataagcaaaaatctatattttagattcattcatttaatgatgcacatagtttttattatagaccacatacatcattaaatgaatgaacctaaa 19613048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 750 - 827
Target Start/End: Original strand, 31101979 - 31102056
Alignment:
Q  750 cattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||||||| ||||  ||||||||  |||||| ||||||||||  ||||||| |||||||||||||| ||||||||    
T  31101979 cattttagattcattcggttaatgatatatatgatctttattataaaccacatacatcatttaatgaatgaatctaaa 31102056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 749 - 834
Target Start/End: Original strand, 33555206 - 33555291
Alignment:
Q  749 acattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgttga 834  Q
    |||||||| ||| ||||||||||||||| |||||  |||||| ||||  |||||| ||||||| |||||| |||||||| ||||||    
T  33555206 acattttaaattcattcaattaatgatgtatatgctctttatcatagatcacatacatcattttatgaataaatctaaaatgttga 33555291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 735 - 827
Target Start/End: Original strand, 37182831 - 37182923
Alignment:
Q  735 ataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||| ||||||| ||||||||||||| ||| | | ||||||| ||||   ||||||||||| ||||||| |||||||||||||| ||| ||||    
T  37182831 ataagcaaaaatttacattttagattcattaattaaatgatgtatatagcctttattatagaccacatacatcatttaatgaatgaatttaaa 37182923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 745 - 832
Target Start/End: Original strand, 800718 - 800805
Alignment:
Q  745 atctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    ||||||||||||  ||||||||||||| |||| ||||||  |||||||||  ||| ||| |||||||||||||| ||| |||| ||||    
T  800718 atctacattttaagtttattcaattaacgatgtatatgatttttattataaaccatatacatcatttaatgaatgaatttaaaatgtt 800805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 751 - 834
Target Start/End: Complemental strand, 31024280 - 31024197
Alignment:
Q  751 attttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgttga 834  Q
    |||||||||| ||||| | ||||||| ||||   ||||||||| | ||||||| |||||||||||||| |||||||| ||||||    
T  31024280 attttagattcattcattaaatgatgtatatcgtctttattatcgaccacatacatcatttaatgaatgaatctaaaatgttga 31024197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 733 - 795
Target Start/End: Complemental strand, 19951572 - 19951510
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattatag 795  Q
    ||||||||||||||| | |||||| ||| ||||||||||||||| |||||  |||||||||||    
T  19951572 ttataaacaaaaatcaatattttatattcattcaattaatgatgtatatgctctttattatag 19951510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 733 - 827
Target Start/End: Original strand, 41805287 - 41805381
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||| | | ||||||| ||| ||||||||||||||| ||||   ||||||||||| ||| ||| |||||||||||| | ||||||||    
T  41805287 ttataagcaaaattttgcattttaaattcattcaattaatgatgtatatagtctttattatagaccatatacatcatttaatgagtgaatctaaa 41805381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 733 - 810
Target Start/End: Original strand, 10996259 - 10996336
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatt 810  Q
    |||||| ||||||| || |||||| ||| ||| ||||||||||| |||||  ||||||||||| ||||||| ||||||    
T  10996259 ttataagcaaaaatttatattttaaattcattgaattaatgatgtatatggtctttattatagaccacatacatcatt 10996336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 734 - 827
Target Start/End: Complemental strand, 24457226 - 24457133
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||| |||||| ||||||||||  || ||||| ||||||||||| ||   ||||||||||| ||||||| |||||| ||||||| || |||||    
T  24457226 tataagcaaaaaactacattttatgttcattcatttaatgatgcacatagtctttattatagaccacatacatcattaaatgaatgaacctaaa 24457133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 734 - 810
Target Start/End: Complemental strand, 5574236 - 5574160
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatt 810  Q
    ||||| ||||||||||| ||||||||  ||||||||||||||| || ||  |||||||||| | |||||| ||||||    
T  5574236 tataagcaaaaatctactttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatatatcatt 5574160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 750 - 810
Target Start/End: Original strand, 11153235 - 11153295
Alignment:
Q  750 cattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatt 810  Q
    ||||||||||| ||||||||||||||| || ||  ||||||||||| ||||||| ||||||    
T  11153235 cattttagattcattcaattaatgatgtatgtgggctttattatagaccacatacatcatt 11153295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 733 - 832
Target Start/End: Original strand, 40204453 - 40204555
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcat---atgaactttattataggccacataaatcatttaatgaattaatctaaatt 829  Q
    |||||| |||||||||| ||| || ||| ||||||||||||||| ||   |||| |||||||||||  |||||| ||||||||||| |  |||||||| |    
T  40204453 ttataagcaaaaatctatattatacattcattcaattaatgatgtatatgatgatctttattatagatcacatacatcatttaatgtaggaatctaaaat 40204552  T
Q  830 gtt 832  Q
    |||    
T  40204553 gtt 40204555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 733 - 773
Target Start/End: Original strand, 44868525 - 44868565
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatg 773  Q
    ||||||||||||||| |||||||| ||||||||||||||||    
T  44868525 ttataaacaaaaatcaacattttaaatttattcaattaatg 44868565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 733 - 792
Target Start/End: Complemental strand, 11342097 - 11342038
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttatta 792  Q
    |||||| |||||||||| |||||||||| ||| ||||||||||| ||||||  |||||||    
T  11342097 ttataagcaaaaatctatattttagattcatttaattaatgatgtatatgatttttatta 11342038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 763 - 834
Target Start/End: Original strand, 21183370 - 21183441
Alignment:
Q  763 ttcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgttga 834  Q
    |||||||||| |||||| |   ||||||| ||| ||||||| |||||||||||||| |||||||| ||||||    
T  21183370 ttcaattaataatgcatgtagtctttattgtagaccacatacatcatttaatgaatgaatctaaaatgttga 21183441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 733 - 776
Target Start/End: Complemental strand, 27331886 - 27331843
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatg 776  Q
    |||||| |||||||| |||||||||||| |||||||||||||||    
T  27331886 ttataagcaaaaatcaacattttagattcattcaattaatgatg 27331843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 733 - 827
Target Start/End: Original strand, 32460754 - 32460849
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaatt-aatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||||| ||||||||||||| |||  ||| ||||||| |||| | |||||||||||  |||||| |||||||||| ||| ||| ||||    
T  32460754 ttataagcaaaaatttacattttagattaattttatttaatgatgtatattatctttattatagaacacatacatcatttaataaataaatttaaa 32460849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 752 - 827
Target Start/End: Original strand, 37396236 - 37396311
Alignment:
Q  752 ttttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||||| ||||||||||||||| ||||||  | |||||||| ||||||| |||||| | ||||| || |||||    
T  37396236 ttttagattcattcaattaatgatgtatatgatttatattatagaccacatacatcattgattgaatgaacctaaa 37396311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 733 - 776
Target Start/End: Complemental strand, 40187370 - 40187327
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatg 776  Q
    |||||||||||||| ||||||||||||| ||||| |||||||||    
T  40187370 ttataaacaaaaatttacattttagattgattcagttaatgatg 40187327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 732 - 782
Target Start/End: Complemental strand, 6166151 - 6166101
Alignment:
Q  732 gttataaacaaaaatctacattttagatttattcaattaatgatgcatatg 782  Q
    ||||||||||||||||||||||||| ||| ||||||| ||| ||| |||||    
T  6166151 gttataaacaaaaatctacattttaaattcattcaataaattatgtatatg 6166101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 785 - 827
Target Start/End: Complemental strand, 11093605 - 11093563
Alignment:
Q  785 ctttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||||||| ||||||| |||||||||||||| ||||||||    
T  11093605 ctttattatagaccacatacatcatttaatgaatcaatctaaa 11093563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 749 - 783
Target Start/End: Complemental strand, 42955144 - 42955110
Alignment:
Q  749 acattttagatttattcaattaatgatgcatatga 783  Q
    |||||||||||||||||||||||||||| ||||||    
T  42955144 acattttagatttattcaattaatgatgtatatga 42955110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 734 - 827
Target Start/End: Complemental strand, 9431323 - 9431230
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||| |||||| ||  ||||||| || ||||| ||||||||||| ||   ||||||||||| ||||||| |||||| ||||||| || |||||    
T  9431323 tataagcaaaaaactgtattttaggttcattcatttaatgatgcacatagtctttattatagaccacatacatcattaaatgaatgaacctaaa 9431230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 762 - 827
Target Start/End: Original strand, 21488069 - 21488134
Alignment:
Q  762 attcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||| ||||||||||| |||  ||||||||||  ||||||| |||||| ||||||| ||||||||    
T  21488069 attcatttaatgatgcacatggtctttattataaaccacatacatcattaaatgaatgaatctaaa 21488134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 733 - 810
Target Start/End: Complemental strand, 29819897 - 29819820
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatt 810  Q
    |||||| ||||||||||  ||||||||| ||||| ||||| ||||| ||   ||||||||||| ||||||| ||||||    
T  29819897 ttataagcaaaaatctatgttttagattcattcatttaataatgcacatagtctttattatagaccacatacatcatt 29819820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 733 - 766
Target Start/End: Complemental strand, 33555304 - 33555271
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattca 766  Q
    ||||||||||||||| ||||||||||||||||||    
T  33555304 ttataaacaaaaatcaacattttagatttattca 33555271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 733 - 818
Target Start/End: Original strand, 36547354 - 36547439
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaat 818  Q
    ||||||||||||||  |||||||| ||| ||| ||| ||||||| || ||| ||||| |||||  |||||| |||||||| |||||    
T  36547354 ttataaacaaaaattgacattttaaattcatttaataaatgatgtatgtgatctttaatatagatcacatacatcatttattgaat 36547439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 972 - 1009
Target Start/End: Original strand, 41188859 - 41188896
Alignment:
Q  972 atgaaaaggggtgatgatatgatgtaaaattactaaaa 1009  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  41188859 atgaaaagggatgatgatgtgatgtaaaattactaaaa 41188896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 1e-25; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 743 - 827
Target Start/End: Complemental strand, 18626824 - 18626740
Alignment:
Q  743 aaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||  ||||||| |||||||||||||| ||||||||    
T  18626824 aaatttacattttagatttattcaattaatgatgcatatgatctttattataaaccacatacatcatttaatgaatgaatctaaa 18626740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 733 - 818
Target Start/End: Original strand, 48603577 - 48603662
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaat 818  Q
    |||||| ||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||  |||||| ||||||||||||||    
T  48603577 ttataagcaagaatctatattttagatttattcaattaatgatgcatatgatctttattatagatcacatacatcatttaatgaat 48603662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 975 - 1033
Target Start/End: Original strand, 35545005 - 35545063
Alignment:
Q  975 aaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatggggtgtac 1033  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  35545005 aaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatggagtgtac 35545063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 737 - 806
Target Start/End: Complemental strand, 48414979 - 48414910
Alignment:
Q  737 aaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaat 806  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||| ||||||||||    
T  48414979 aaacaaaaatctacattttagatttattcatttaatgatgcacatgatctttattatagaccacataaat 48414910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 734 - 827
Target Start/End: Original strand, 3511723 - 3511816
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||| ||||| | ||||||||||||| ||||||||||||||| |||||| ||||||||||| ||||||  |||||||||||||| ||| ||||    
T  3511723 tataagcaaaactttacattttagattcattcaattaatgatgtatatgatctttattatagaccacattcatcatttaatgaataaatttaaa 3511816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 733 - 834
Target Start/End: Complemental strand, 4406368 - 4406267
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    |||||| ||||||| || ||||| |||| ||||||||||||||| || ||  ||||||||||| ||||||| |||||||||||||| |||||||| ||||    
T  4406368 ttataagcaaaaatttatattttggattcattcaattaatgatgtatgtggtctttattatagaccacatacatcatttaatgaataaatctaaaatgtt 4406269  T
Q  833 ga 834  Q
    ||    
T  4406268 ga 4406267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 733 - 834
Target Start/End: Complemental strand, 40952475 - 40952374
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    |||||| ||||||| || |||||||||| ||||||||||  ||| ||||||  |||||||||| ||||||| |||||||||||||| |||||||| ||||    
T  40952475 ttataagcaaaaatttatattttagattcattcaattaaatatgtatatgatttttattatagaccacatatatcatttaatgaatgaatctaaaatgtt 40952376  T
Q  833 ga 834  Q
    ||    
T  40952375 ga 40952374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 755 - 827
Target Start/End: Complemental strand, 10572826 - 10572754
Alignment:
Q  755 tagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||||||||||||||||||| |||||| ||||||||||| ||||||| |||||| ||||||| ||||||||    
T  10572826 tagatttattcaattaatgatgtatatgatctttattatagaccacatacatcattcaatgaatgaatctaaa 10572754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 741 - 832
Target Start/End: Complemental strand, 19878405 - 19878314
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    |||||| ||||||||| ||| ||| ||||||||||| |||||| ||||||||||| ||||||| ||| |||||||||| |||||||| ||||    
T  19878405 aaaaatttacattttaaattcatttaattaatgatgtatatgatctttattatagtccacatacatcgtttaatgaatgaatctaaaatgtt 19878314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 741 - 827
Target Start/End: Complemental strand, 16468323 - 16468237
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||||||||||||||||||||||| |||||||| || |||| ||||||||||| ||||||| |||||| ||| ||| || |||||    
T  16468323 aaaaatctacattttagatttattcatttaatgattcacatgatctttattatagaccacatacatcattaaataaatgaacctaaa 16468237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 733 - 823
Target Start/End: Original strand, 36786163 - 36786253
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatc 823  Q
    ||||||||||||||| |||||||||||| ||||||||||||||| ||||   ||||||||||  ||||||| ||||||| |||||| ||||    
T  36786163 ttataaacaaaaatcaacattttagattcattcaattaatgatgtatatagtctttattataaaccacatacatcatttgatgaatgaatc 36786253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 975 - 1033
Target Start/End: Original strand, 44275799 - 44275856
Alignment:
Q  975 aaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatggggtgtac 1033  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  44275799 aaaaagggtgatgatatgatgtaaaattact-aaaatacccctaacacatggggtgtac 44275856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 733 - 834
Target Start/End: Original strand, 16170923 - 16171024
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    ||||||| |||| | ||||||||||||| |||||||||||| || |||||  ||||||||||| | ||||| |||||||||| ||| |||||||| ||||    
T  16170923 ttataaaaaaaactttacattttagattcattcaattaatggtgtatatggtctttattatagactacatacatcatttaattaataaatctaaaatgtt 16171022  T
Q  833 ga 834  Q
    ||    
T  16171023 ga 16171024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 741 - 834
Target Start/End: Complemental strand, 40881546 - 40881453
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgttga 834  Q
    ||||||| ||| |||||||| ||||||||||||||| |||||| |||||||||| | |||||| |||||||||| ||| ||| |||| ||||||    
T  40881546 aaaaatcaacactttagattcattcaattaatgatgtatatgatctttattatatgtcacatacatcatttaataaataaatttaaaatgttga 40881453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 734 - 827
Target Start/End: Complemental strand, 56328576 - 56328483
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||| |||||| |||||||||||||| ||||| ||||||||||||||   ||||||||||| ||||||| |||||| ||||||| || |||||    
T  56328576 tataagcaaaaaactacattttagattcattcatttaatgatgcatatagtctttattatagaccacatacatcattaaatgaatgaacctaaa 56328483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 750 - 826
Target Start/End: Original strand, 4484104 - 4484180
Alignment:
Q  750 cattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaa 826  Q
    ||||||||||| ||||||||||||||| |||||  ||||||||||| ||||||| |||||||||||||  |||||||    
T  4484104 cattttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaacaaatctaa 4484180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 733 - 827
Target Start/End: Original strand, 14450970 - 14451064
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||||||||||||||||||| ||||| ||||||||||| |||  |||||||||||  |||||| |||||| || |||| || |||||    
T  14450970 ttataagcaaaaatctacattttagattcattcatttaatgatgcacatggtctttattatagatcacatacatcattaaacgaatgaacctaaa 14451064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 741 - 827
Target Start/End: Original strand, 24798148 - 24798234
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||||||| ||||||||| |||||| || |||||| ||||||||||| |||| || |||||||||||||| ||| ||||    
T  24798148 aaaaatttacattttatatttattcatttaatggtgtatatgatctttattatagaccacgtacatcatttaatgaatgaatttaaa 24798234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 733 - 827
Target Start/End: Original strand, 32599493 - 32599587
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||||||||| ||| |||||| ||||||| ||||||| ||| |||||  ||||||||||  ||||||| |||||||||| ||| ||||||||    
T  32599493 ttataaacaaaaaactatattttatatttattaaattaattatgtatatggtctttattataaaccacatacatcatttaataaatgaatctaaa 32599587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 741 - 826
Target Start/End: Original strand, 18423913 - 18423998
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaa 826  Q
    |||||| || |||||||||| ||||||||||||||| |||||| ||||||||||   || ||| |||||||||||||| |||||||    
T  18423913 aaaaatttatattttagattcattcaattaatgatgtatatgatctttattataaatcatatacatcatttaatgaataaatctaa 18423998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 751 - 832
Target Start/End: Original strand, 40814700 - 40814781
Alignment:
Q  751 attttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    |||||||||| |||||| |||||||  |||||| ||||||||||  ||||||| |||||||||||||| |||||||| ||||    
T  40814700 attttagattcattcaactaatgatatatatgatctttattataaaccacatatatcatttaatgaatgaatctaaaatgtt 40814781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 733 - 818
Target Start/End: Original strand, 49481893 - 49481978
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaat 818  Q
    |||||| ||||| | ||||||||||||| ||||| ||||||||||| |||  ||||||||||| ||||||| |||||| |||||||    
T  49481893 ttataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaatgaat 49481978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 733 - 818
Target Start/End: Original strand, 54713111 - 54713196
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaat 818  Q
    |||||| ||||||| ||||||||||||| ||||| ||||||||||| |||  ||||||| ||| ||||||| |||||| |||||||    
T  54713111 ttataagcaaaaatttacattttagattcattcatttaatgatgcacatggtctttattgtagaccacatacatcattaaatgaat 54713196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 751 - 827
Target Start/End: Original strand, 5816570 - 5816646
Alignment:
Q  751 attttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||| ||| ||||||||||| |||||| |||||||||||  |||||| |||||||||||||| ||||||||    
T  5816570 attttaaattcatttaattaatgatgtatatgatctttattatagatcacatatatcatttaatgaatgaatctaaa 5816646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 733 - 826
Target Start/End: Complemental strand, 21649462 - 21649367
Alignment:
Q  733 ttataaacaaaaatctacattttagatt--tattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaa 826  Q
    |||||| ||||| |||| |||||| |||  |||||||||||||||| | |||| ||||||||||| ||||||| |||||||||||||  |||||||    
T  21649462 ttataagcaaaattctatattttaaattcatattcaattaatgatgtacatgatctttattatagaccacatatatcatttaatgaaagaatctaa 21649367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 741 - 832
Target Start/End: Original strand, 54931840 - 54931931
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    ||||||||| |||||| ||||||||||||||| ||| ||||||  |||||||||  ||  ||| |||||||||||||| |||||||| ||||    
T  54931840 aaaaatctatattttaaatttattcaattaattatgtatatgatttttattatataccgtatacatcatttaatgaatgaatctaaaatgtt 54931931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 733 - 827
Target Start/End: Original strand, 33693982 - 33694076
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||| | | |||||||||||  |||||||||||||| |||||  ||||||||||| ||||||| || ||||||||||| || |||||    
T  33693982 ttataagcaaaattttgcattttagattcgttcaattaatgatgtatatggtctttattatagaccacatacataatttaatgaatgaacctaaa 33694076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 733 - 827
Target Start/End: Original strand, 36072583 - 36072677
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||| | | ||||||||||| |||||||| |||||| |||||  ||||||||||| | ||||| |||||||||||||| ||| ||||    
T  36072583 ttataagcaaaattttgcattttagattcattcaatttatgatgtatatggtctttattatagactacatacatcatttaatgaatgaatttaaa 36072677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 740 - 834
Target Start/End: Original strand, 39533776 - 39533870
Alignment:
Q  740 caaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgttga 834  Q
    |||||||  |||||||||||| ||| | | ||||||| |||| | |||||||||||  |||||| |||||||||||||| |||||||| ||||||    
T  39533776 caaaaattaacattttagattcatttattaaatgatgtatataatctttattatagatcacatacatcatttaatgaataaatctaaaatgttga 39533870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 732 - 834
Target Start/End: Complemental strand, 46518903 - 46518801
Alignment:
Q  732 gttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgt 831  Q
    ||||||||||||||||||||||||| |||  | |||||||||||| |||||    ||||||||| | | ||| | |||||||||||| |||||||| |||    
T  46518903 gttataaacaaaaatctacattttaaattcttacaattaatgatgtatatggtagttattatagacaatatataacatttaatgaatgaatctaaaatgt 46518804  T
Q  832 tga 834  Q
    |||    
T  46518803 tga 46518801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 734 - 827
Target Start/End: Complemental strand, 21884145 - 21884052
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||| |||||| ||| ||||||| || ||||| ||||||||||| |||  ||||||||||| ||||||| |||||| ||||||| || |||||    
T  21884145 tataagcaaaaaactatattttaggttcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaatgaatgaacctaaa 21884052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 741 - 818
Target Start/End: Original strand, 23071427 - 23071504
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaat 818  Q
    |||||| || |||||||||| ||||| ||||||||||| |||| ||||||||||| ||| ||| |||||| |||||||    
T  23071427 aaaaatttatattttagattcattcatttaatgatgcacatgatctttattatagaccatatacatcattaaatgaat 23071504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 742 - 827
Target Start/End: Original strand, 49231300 - 49231385
Alignment:
Q  742 aaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||||| |||||| ||| ||| ||||||||||  |||||| ||||||| ||| ||||||  |||||||||||||| ||||||||    
T  49231300 aaaatctatattttaaattcatttaattaatgatatatatgatctttattgtagaccacatgcatcatttaatgaatgaatctaaa 49231385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 755 - 827
Target Start/End: Original strand, 25138718 - 25138790
Alignment:
Q  755 tagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| || |||||||||||| ||||   ||||||||||| |||| || |||||||||||||||||||||||    
T  25138718 tagattcatgcaattaatgatgtatattgtctttattatagaccacgtatatcatttaatgaattaatctaaa 25138790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 751 - 827
Target Start/End: Original strand, 38298121 - 38298197
Alignment:
Q  751 attttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||||||| ||||||||||||||| |||||  ||||||||||  |||||||  ||| ||||||||| ||||||||    
T  38298121 attttagattcattcaattaatgatgtatatggtctttattataaaccacatacttcaattaatgaatgaatctaaa 38298197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 735 - 827
Target Start/End: Original strand, 52914013 - 52914105
Alignment:
Q  735 ataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||| |||||||  |||||||||||| |||||   ||||||| ||||   ||||||||||| ||||||| |||||||||||||| ||||||||    
T  52914013 ataagcaaaaattaacattttagattcattcatgaaatgatgtatatagtctttattatagaccacatacatcatttaatgaatgaatctaaa 52914105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 734 - 793
Target Start/End: Complemental strand, 7215606 - 7215547
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattat 793  Q
    ||||||||||||| || |||||| |||  ||||||||||||||||||||| |||||||||    
T  7215606 tataaacaaaaatttatattttaaattcgttcaattaatgatgcatatgatctttattat 7215547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 741 - 832
Target Start/End: Complemental strand, 12912728 - 12912637
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    ||||||||||||| |||||| ||||| |||||||   ||||||  |||||||||  ||| ||| |||||||||||||| |||||||| ||||    
T  12912728 aaaaatctacattatagattcattcacttaatgacatatatgatttttattatataccatatacatcatttaatgaataaatctaaaatgtt 12912637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 734 - 833
Target Start/End: Original strand, 22493590 - 22493689
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgttg 833  Q
    ||||||||||||| |  ||| | ||||||||||||| |||||| |||||  |||||||||||  |||||| |||||||||| ||| ||| |||| |||||    
T  22493590 tataaacaaaaatttgtattatggatttattcaattgatgatgtatatggtctttattatagatcacatacatcatttaataaatgaatataaaatgttg 22493689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 982 - 1033
Target Start/End: Original strand, 49243915 - 49243965
Alignment:
Q  982 gtgatgatatgatgtaaaattactaaaaatacccctaacacatggggtgtac 1033  Q
    |||||||||||||||||||||||| ||||||||||||| |||||| ||||||    
T  49243915 gtgatgatatgatgtaaaattact-aaaatacccctaatacatggagtgtac 49243965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 741 - 827
Target Start/End: Original strand, 55416321 - 55416405
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| || |||| ||||| ||||||||||||||| |||||  ||||||||||| ||||||| || ||||||||||| ||| ||||    
T  55416321 aaaaatttatatttgagattcattcaattaatgatgtatatg--ctttattatagaccacatacattatttaatgaatgaatataaa 55416405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 952 - 1033
Target Start/End: Original strand, 6112699 - 6112780
Alignment:
Q  952 gcaaaaacactgaa-gaggaaatgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatggggtgtac 1033  Q
    ||||||||| |||| || || ||||||| || |||||||||||||||||||||||  |||||||||||| |||||| ||||||    
T  6112699 gcaaaaacattgaaagaagagatgaaaaaggatgatgatatgatgtaaaattact-caaatacccctaatacatggagtgtac 6112780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 733 - 827
Target Start/End: Original strand, 12672460 - 12672552
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||||||||||| ||||||||||||| ||||||||||| || | |||   ||||||| | | ||||||| |||||||||||||| ||||||||    
T  12672460 ttataaacaaaaatttacattttagattcattcaattaat-at-cgtatagtctttattgtggaccacatacatcatttaatgaataaatctaaa 12672552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 733 - 827
Target Start/End: Original strand, 27537069 - 27537163
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||||| ||||||||||||| ||||| | ||||||| |  ||| ||||||||||  | ||||| |||||||||||||| ||| ||||    
T  27537069 ttataagcaaaaatttacattttagattcattcattaaatgatgtaagtgatctttattataaccaacatacatcatttaatgaatgaatttaaa 27537163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 748 - 834
Target Start/End: Complemental strand, 41654612 - 41654526
Alignment:
Q  748 tacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgttga 834  Q
    ||||||||||||| ||| |  |||||||| ||||||  |||||||||| ||| ||| |||| ||||| |||||||||||| ||||||    
T  41654612 tacattttagattcattaacgtaatgatgtatatgatatttattatagaccatatacatcaattaattaattaatctaaaatgttga 41654526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 742 - 827
Target Start/End: Complemental strand, 2441028 - 2440943
Alignment:
Q  742 aaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||| ||||||||||| || ||||| ||||||||||| |||  ||||||||||| ||||||| |||||| ||| ||| || |||||    
T  2441028 aaaaactacattttaggttcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaataaatgaacctaaa 2440943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 741 - 814
Target Start/End: Complemental strand, 4708655 - 4708582
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaat 814  Q
    |||||| || |||||| ||| ||| ||||||| ||| |||||| ||||||||||| ||||||| ||||||||||    
T  4708655 aaaaatttatattttaaattcatttaattaataatgtatatgatctttattatagaccacatacatcatttaat 4708582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 750 - 827
Target Start/End: Complemental strand, 8826975 - 8826898
Alignment:
Q  750 cattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||||||| ||| | ||||||||| |||||  |||||||||||  |||||| |||||||||||||| ||| ||||    
T  8826975 cattttagattcatttatttaatgatgtatatggtctttattatagatcacatacatcatttaatgaataaatttaaa 8826898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 733 - 814
Target Start/End: Complemental strand, 21113119 - 21113038
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaat 814  Q
    |||||||||||||||||||||||| |||  || ||||||||||| |||| |  |||||||||  ||||||| || |||||||    
T  21113119 ttataaacaaaaatctacattttatattcgtttaattaatgatgtatattatttttattatataccacatatattatttaat 21113038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 733 - 834
Target Start/End: Complemental strand, 21142217 - 21142116
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    |||||| ||||| | || |||||||||| ||| ||||||||||| |||||  ||||||||||  | | ||| ||||||||||| || |||||||| ||||    
T  21142217 ttataagcaaaagtttatattttagattcatttaattaatgatgtatatggtctttattataaactaaatacatcatttaatgcatgaatctaaaatgtt 21142118  T
Q  833 ga 834  Q
    ||    
T  21142117 ga 21142116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 988 - 1033
Target Start/End: Complemental strand, 21391040 - 21390996
Alignment:
Q  988 atatgatgtaaaattactaaaaatacccctaacacatggggtgtac 1033  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||    
T  21391040 atatgatgtaaaattactaaaa-tacccctaacacatgaggtgtac 21390996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 750 - 827
Target Start/End: Complemental strand, 26920782 - 26920705
Alignment:
Q  750 cattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||||||| ||||||||||||||| | ||   ||||||||||| |||| || ||||||||| |||| ||||||||    
T  26920782 cattttagattcattcaattaatgatgtacatcgtctttattatagaccacgtacatcatttaacgaatgaatctaaa 26920705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 734 - 827
Target Start/End: Complemental strand, 44239910 - 44239817
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||||||||| ||  ||||| ||| || |||| ||||||| |||||| ||||| ||||| | ||||| |||||||| | ||||||||||||    
T  44239910 tataaacaaaaatttatgttttaaattcatccaataaatgatgtatatgatctttagtatagacaacatatatcatttattaaattaatctaaa 44239817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 741 - 810
Target Start/End: Original strand, 51232292 - 51232361
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatt 810  Q
    ||||| ||||||||||| || ||| | ||||||||||| |||| ||||||||||| ||||||| ||||||    
T  51232292 aaaaaactacattttaggttcatttatttaatgatgcacatgatctttattatagaccacatacatcatt 51232361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 751 - 827
Target Start/End: Complemental strand, 2582917 - 2582841
Alignment:
Q  751 attttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||||||| ||||| | ||| |||  ||||| ||||||||||| | ||||| |||||||||||||| ||||||||    
T  2582917 attttagattcattcattaaattatgtttatgacctttattatagactacatacatcatttaatgaatcaatctaaa 2582841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 972 - 1028
Target Start/End: Complemental strand, 28093197 - 28093142
Alignment:
Q  972 atgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatgggg 1028  Q
    ||||||| ||||||||||||||||||||| ||||  |||||||||||| ||||||||    
T  28093197 atgaaaaagggtgatgatatgatgtaaaaatact-caaatacccctaatacatgggg 28093142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 751 - 827
Target Start/End: Complemental strand, 50686114 - 50686038
Alignment:
Q  751 attttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||||||| |||||||||| |||| |||||| |||||||||||  |||||| || ||||||| ||| ||| ||||    
T  50686114 attttagattcattcaattaacgatgtatatgatctttattatagatcacatacattatttaataaatgaatttaaa 50686038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 734 - 818
Target Start/End: Complemental strand, 52817693 - 52817609
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaat 818  Q
    ||||| |||||||| || ||||||||  ||||||||||||||| || ||| |||||||||| | |||||| ||| || |||||||    
T  52817693 tataagcaaaaatccactttttagatacattcaattaatgatgtatgtgatctttattatatgtcacatacatccttaaatgaat 52817609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 751 - 827
Target Start/End: Original strand, 55936018 - 55936094
Alignment:
Q  751 attttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||||||| ||||| | ||||||| ||||   ||||||||| | ||||||| |||||||||||||| ||||||||    
T  55936018 attttagattcattcattaaatgatgtatatcgtctttattatcgaccacatacatcatttaatgaatgaatctaaa 55936094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 952 - 1033
Target Start/End: Original strand, 3672343 - 3672425
Alignment:
Q  952 gcaaaaacactgaa-gaggaaatgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatg-gggtgtac 1033  Q
    ||||||||| |||| || || ||||||| |||||||||||||||||| |||||||  |||||||||||| ||||| ||||||||    
T  3672343 gcaaaaacattgaaagaagagatgaaaaagggtgatgatatgatgtataattact-caaatacccctaatacatgagggtgtac 3672425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 975 - 1033
Target Start/End: Original strand, 7217858 - 7217916
Alignment:
Q  975 aaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatg-gggtgtac 1033  Q
    |||| |||||||||||||||||||||||||| ||||||||  ||||||||| ||||||||    
T  7217858 aaaaagggtgatgatatgatgtaaaattact-aaaatacctataacacatgagggtgtac 7217916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 733 - 776
Target Start/End: Original strand, 34616228 - 34616271
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatg 776  Q
    |||||||||||||||||||||||||||| ||||| | |||||||    
T  34616228 ttataaacaaaaatctacattttagattcattcattaaatgatg 34616271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 733 - 772
Target Start/End: Complemental strand, 38716435 - 38716396
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaat 772  Q
    |||||||||||||| ||||||||||||| |||||||||||    
T  38716435 ttataaacaaaaatttacattttagattcattcaattaat 38716396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 733 - 776
Target Start/End: Complemental strand, 39160941 - 39160898
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatg 776  Q
    |||||||||||||||||||||||||||| ||||| | |||||||    
T  39160941 ttataaacaaaaatctacattttagattcattcattaaatgatg 39160898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 748 - 818
Target Start/End: Original strand, 4044326 - 4044396
Alignment:
Q  748 tacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaat 818  Q
    |||||||||  || ||||| ||||||||||| |||  ||||||||||| ||||||| |||||| |||||||    
T  4044326 tacattttaagttcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaatgaat 4044396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 766 - 832
Target Start/End: Complemental strand, 23004056 - 23003990
Alignment:
Q  766 aattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    ||||||||||| |||||| ||||||||||| | ||||| || ||||||||||  |||||||| ||||    
T  23004056 aattaatgatgtatatgatctttattatagactacatacattatttaatgaacgaatctaaaatgtt 23003990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 713 - 782
Target Start/End: Original strand, 38539471 - 38539540
Alignment:
Q  713 tatacacctttcactcaccgttataaacaaaaatctacattttagatttattcaattaatgatgcatatg 782  Q
    |||||||||| || ||||  |||||| ||||||| || |||||| ||||||||||| ||||||| |||||    
T  38539471 tatacaccttccaatcactattataagcaaaaatttatattttaaatttattcaataaatgatgtatatg 38539540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 749 - 794
Target Start/End: Complemental strand, 40575950 - 40575905
Alignment:
Q  749 acattttagatttattcaattaatgatgcatatgaactttattata 794  Q
    |||||||||||||||||||||||| ||| ||||||  |||||||||    
T  40575950 acattttagatttattcaattaataatgtatatgatttttattata 40575905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 751 - 827
Target Start/End: Complemental strand, 50371292 - 50371215
Alignment:
Q  751 attttagatttattcaattaa-tgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||||||| |||||||||| |||||||||||  |||||||||||   ||| | ||||||||||||||  |||||||    
T  50371292 attttagattcattcaattaaatgatgcatatggtctttattatagattacacacatcatttaatgaatggatctaaa 50371215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 742 - 791
Target Start/End: Original strand, 51829195 - 51829244
Alignment:
Q  742 aaaatctacattttagatttattcaattaatgatgcatatgaactttatt 791  Q
    ||||||||||||||| ||||||| ||||||||||| ||| || |||||||    
T  51829195 aaaatctacattttaaatttatttaattaatgatgtatacgatctttatt 51829244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 58; Significance: 7e-24; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 737 - 834
Target Start/End: Complemental strand, 89721 - 89624
Alignment:
Q  737 aaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgttga 834  Q
    |||||||||| ||||||||| ||||||||||||||||||| |||||| |||||||||||  |||||| |||||||||||||  |||||||| ||||||    
T  89721 aaacaaaaatttacattttaaatttattcaattaatgatgtatatgatctttattatagatcacatacatcatttaatgaaagaatctaaaatgttga 89624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 7e-24; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 741 - 818
Target Start/End: Original strand, 3225801 - 3225878
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaat 818  Q
    |||||||||||||||| ||||||||||||||||||| |||||| ||||||||||| ||||||| ||||||||||||||    
T  3225801 aaaaatctacattttaaatttattcaattaatgatgtatatgatctttattatagaccacatacatcatttaatgaat 3225878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 733 - 818
Target Start/End: Complemental strand, 10117097 - 10117012
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaat 818  Q
    |||||| ||||||| ||||||||||||| ||||||||||||||| ||||||  |||||||||| ||||||| ||||||||||||||    
T  10117097 ttataagcaaaaatttacattttagattcattcaattaatgatgtatatgatatttattatagaccacatacatcatttaatgaat 10117012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 748 - 827
Target Start/End: Complemental strand, 7258697 - 7258618
Alignment:
Q  748 tacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||||||||| |||||||||||||||||||||  ||||||||||| ||||||| || ||||||||||| ||||||||    
T  7258697 tacattttagattcattcaattaatgatgcatatggtctttattatagaccacatacattatttaatgaatgaatctaaa 7258618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 733 - 827
Target Start/End: Complemental strand, 5888463 - 5888369
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||||||||| || |||||| ||||||||||||||| |||||  ||||||||||| | ||||| |||||||||||||| ||||||||    
T  5888463 ttataagcaaaaatctactttgtagattcattcaattaatgatgtatatggtctttattatagacaacatacatcatttaatgaatgaatctaaa 5888369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 733 - 827
Target Start/End: Complemental strand, 27518442 - 27518348
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||| ||   ||||||||||| ||||||| |||||| ||||||| || |||||    
T  27518442 ttataaacaaaaatctacattttagattcattcatttaatgatgcacatagtctttattatagaccacatatatcattaaatgaatgaacctaaa 27518348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 733 - 834
Target Start/End: Complemental strand, 13080215 - 13080114
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||| || ||  |||||||| || | ||||| |||||||||||||| |||||||| ||||    
T  13080215 ttataaacaaaaatctacattttacattcattgaattaatgatgtatgtggtctttattaaagactacatacatcatttaatgaatgaatctaaaatgtt 13080116  T
Q  833 ga 834  Q
    ||    
T  13080115 ga 13080114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 733 - 827
Target Start/End: Original strand, 25267988 - 25268081
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||||||||||||||||||||||||| ||| ||||||||||  |||||| ||||||||||  ||| ||| |||||||||| ||| ||||||||    
T  25267988 ttataaacaaaaatctacattttagattcatttaattaatgat-tatatgatctttattataaaccatatacatcatttaataaataaatctaaa 25268081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 972 - 1033
Target Start/End: Original strand, 18184643 - 18184703
Alignment:
Q  972 atgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatggggtgtac 1033  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||    
T  18184643 atgaaaaggggtgatgatatgatataaaattact-aaaatacccctaacacatgaggtgtac 18184703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 750 - 827
Target Start/End: Complemental strand, 24287895 - 24287818
Alignment:
Q  750 cattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||||||||||||| ||||||||| |||||  ||||||||||| ||| ||| |||||||||||||| ||||||||    
T  24287895 cattttagatttattcagttaatgatgtatatggtctttattatagaccatatacatcatttaatgaatgaatctaaa 24287818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 732 - 832
Target Start/End: Original strand, 18603470 - 18603570
Alignment:
Q  732 gttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgt 831  Q
    ||||||||||||| |  |||||||||||| ||| ||||||| ||| |||||| ||||||||||  ||||||| |||||||||| ||| |||||||| |||    
T  18603470 gttataaacaaaagttcacattttagattcatttaattaataatgtatatgatctttattatataccacatacatcatttaattaataaatctaaaatgt 18603569  T
Q  832 t 832  Q
    |    
T  18603570 t 18603570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 733 - 823
Target Start/End: Complemental strand, 2805940 - 2805850
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatc 823  Q
    ||||||| |||| | ||||||||| ||| ||||||||||| ||| |||||| ||||||||||| ||||||| |||||||||| ||| ||||    
T  2805940 ttataaataaaattttacattttaaattcattcaattaataatgtatatgatctttattatagaccacatatatcatttaataaatgaatc 2805850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 741 - 827
Target Start/End: Complemental strand, 9015935 - 9015849
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||||| |||||||||| ||||||||||||||| |||||| ||||||||||| || ||||  || |||||| ||| ||||||||    
T  9015935 aaaaatctatattttagattcattcaattaatgatgtatatgatctttattatagacctcatacgtcctttaataaatgaatctaaa 9015849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 733 - 827
Target Start/End: Original strand, 31810347 - 31810441
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| |||||  |||||||||||||| ||||| ||||||||||| |||  ||||||||||| || |||| |||||| ||||||| ||||||||    
T  31810347 ttataagcaaaatgctacattttagattcattcatttaatgatgcacatggtctttattatagaccgcatacatcattaaatgaatgaatctaaa 31810441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 733 - 795
Target Start/End: Complemental strand, 45045504 - 45045442
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattatag 795  Q
    ||||||||||||||||| |||||||||| ||||||||||||||| |||||  |||||||||||    
T  45045504 ttataaacaaaaatctatattttagattcattcaattaatgatgtatatggtctttattatag 45045442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 733 - 834
Target Start/End: Original strand, 24017731 - 24017832
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    |||||| |||||||   ||||||| |||  |||||||||||||| |||||| |||||||| || ||||||| |||||||||| ||| |||||||| ||||    
T  24017731 ttataagcaaaaattaccattttaaattccttcaattaatgatgtatatgatctttattacagaccacatacatcatttaattaataaatctaaaatgtt 24017830  T
Q  833 ga 834  Q
    ||    
T  24017831 ga 24017832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 733 - 827
Target Start/End: Complemental strand, 11335694 - 11335600
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||| | | ||||||||||| ||||||||||| ||| |||||| |||| ||| ||  |||||| |||||||||||||| ||||||||    
T  11335694 ttataagcaaaactttgcattttagattcattcaattaataatgtatatgatctttgttagagagcacatacatcatttaatgaatgaatctaaa 11335600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 975 - 1025
Target Start/End: Original strand, 12665438 - 12665487
Alignment:
Q  975 aaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatg 1025  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  12665438 aaaaagggtgatgatatgatgtaaaattact-aaaatacccctaacacatg 12665487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 733 - 827
Target Start/End: Original strand, 13290048 - 13290142
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||||  |||||||| |||| |||||||||||  || |||||  ||| ||||||| ||||||| |||||||||||||| ||||||||    
T  13290048 ttataagcaaaaaattacattttggattcattcaattaatagtgtatatggtcttcattatagaccacatatatcatttaatgaatgaatctaaa 13290142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 748 - 818
Target Start/End: Complemental strand, 17923777 - 17923707
Alignment:
Q  748 tacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaat 818  Q
    ||||||||||||||||||||||||||||| || ||| | ||||||||  | ||||| ||||||||||||||    
T  17923777 tacattttagatttattcaattaatgatgtatttgatcattattataaacaacatacatcatttaatgaat 17923707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 952 - 1009
Target Start/End: Original strand, 30432408 - 30432466
Alignment:
Q  952 gcaaaaacactgaa-gaggaaatgaaaaggggtgatgatatgatgtaaaattactaaaa 1009  Q
    ||||||||| |||| || || ||||||||||||||||||||||||||||||||||||||    
T  30432408 gcaaaaacattgaaagaagagatgaaaaggggtgatgatatgatgtaaaattactaaaa 30432466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 733 - 827
Target Start/End: Complemental strand, 33070292 - 33070198
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||| | | ||||||||||| ||||| |||||| || |||||  ||||||||||| | ||||| |||||||||||||| ||||||||    
T  33070292 ttataagcaaaattttgcattttagattcattcatttaatggtgtatatggtctttattatagactacatacatcatttaatgaatgaatctaaa 33070198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 733 - 827
Target Start/End: Complemental strand, 40640405 - 40640311
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||| | | ||||||||||| ||||||||||||||| | ||   ||||||||||| |||| || |||||||||||||| ||||||||    
T  40640405 ttataagcaaaactttgcattttagattcattcaattaatgatgtacatagtctttattatagaccacgtacatcatttaatgaatgaatctaaa 40640311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 750 - 827
Target Start/End: Complemental strand, 2296584 - 2296507
Alignment:
Q  750 cattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||||||| ||||||||||| ||| | |||  ||||||||||| ||| ||| |||||||||||||| ||||||||    
T  2296584 cattttagattcattcaattaataatgtacatggtctttattatagaccatatacatcatttaatgaatgaatctaaa 2296507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 733 - 834
Target Start/End: Original strand, 10934616 - 10934717
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    |||||| |||||| ||| |||||| ||| ||| ||||||||||| || |   ||||||| ||| ||||||| |||||||||||||| |||||||| ||||    
T  10934616 ttataagcaaaaaactatattttacattcatttaattaatgatgtatgtagtctttattgtagaccacatacatcatttaatgaatgaatctaaaatgtt 10934715  T
Q  833 ga 834  Q
    ||    
T  10934716 ga 10934717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 733 - 818
Target Start/End: Complemental strand, 13496562 - 13496477
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaat 818  Q
    |||||| ||||||| ||||||||| ||| ||||| ||||||||||| |||  ||||||||||| ||| ||| |||||| |||||||    
T  13496562 ttataagcaaaaatttacattttaaattcattcatttaatgatgcacatggtctttattatagaccaaatacatcattaaatgaat 13496477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 734 - 827
Target Start/End: Original strand, 31505052 - 31505145
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||| |||||| ||||||||||| || ||||| ||||||||||| ||   ||||||||||| ||||||| |||||| ||||||| || |||||    
T  31505052 tataagcaaaaaactacattttaggttcattcatttaatgatgcacatagtctttattatagaccacatacatcattaaatgaatgaacctaaa 31505145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 767 - 827
Target Start/End: Complemental strand, 2116199 - 2116139
Alignment:
Q  767 attaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||||||||| |||| ||||||||||| ||||||| |||||| ||||||| ||||||||    
T  2116199 attaatgatgcacatgatctttattatagaccacatacatcattaaatgaatgaatctaaa 2116139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 712 - 832
Target Start/End: Original strand, 11295656 - 11295776
Alignment:
Q  712 gtatacacctttcactcaccgttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcattt 811  Q
    ||||||||||| |  ||||  |||||| |||||||| |||||||||||  ||||| | ||||||| || ||  ||||||||||  ||||||  |||||||    
T  11295656 gtatacaccttccggtcactattataagcaaaaatcaacattttagatacattcattaaatgatgtatgtggtctttattataaaccacatgcatcattt 11295755  T
Q  812 aatgaattaatctaaattgtt 832  Q
    ||||||| |||||||| ||||    
T  11295756 aatgaatgaatctaaaatgtt 11295776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 748 - 832
Target Start/End: Complemental strand, 33385283 - 33385199
Alignment:
Q  748 tacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    ||||||||||||| ||||||||||||||  |||| |  |||||||||| ||||||| |||||||||  ||| |||||||| ||||    
T  33385283 tacattttagattcattcaattaatgatatatataatatttattatagaccacatacatcatttaaaaaataaatctaaaatgtt 33385199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 972 - 1028
Target Start/End: Original strand, 42162688 - 42162743
Alignment:
Q  972 atgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatgggg 1028  Q
    ||||||| ||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  42162688 atgaaaaagggtgatgatatgatgtaaaattact-caaatacccctaatacatgggg 42162743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 751 - 834
Target Start/End: Original strand, 7484648 - 7484731
Alignment:
Q  751 attttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgttga 834  Q
    |||||||||| ||||| | ||||||| ||||   ||||||||| | ||||||| |||||||||||||| |||||||| ||||||    
T  7484648 attttagattcattcattaaatgatgtatatcgtctttattatcgaccacatacatcatttaatgaatgaatctaaaatgttga 7484731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 741 - 827
Target Start/End: Complemental strand, 20546757 - 20546671
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||||||||||||| ||| ||||||||||||||  ||| |  ||||||||| |  |||||| |||| ||||||||| ||||||||    
T  20546757 aaaaatctacattttaaattaattcaattaatgatatataaggtctttattattgatcacatacatcaattaatgaatgaatctaaa 20546671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 733 - 827
Target Start/End: Original strand, 23627679 - 23627773
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| |||||||||  |||||||||||||||| ||||||||| | ||   ||||||| ||| ||||||| |||||| ||||||| || |||||    
T  23627679 ttataagcaaaaatctgtattttagatttattcatttaatgatgtacatagtctttattttagaccacatacatcattaaatgaatgaacctaaa 23627773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 727 - 824
Target Start/End: Complemental strand, 2382719 - 2382622
Alignment:
Q  727 tcaccgttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatct 824  Q
    |||| ||||||| ||||| | | ||||| ||||  ||||| ||||||||  |||||| ||||||||||| ||| ||| |||||||||||||| |||||    
T  2382719 tcactgttataagcaaaactttgcatttcagatacattcatttaatgatatatatgatctttattatagaccaaatacatcatttaatgaatgaatct 2382622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 952 - 1028
Target Start/End: Original strand, 31318874 - 31318950
Alignment:
Q  952 gcaaaaacactgaa-gaggaaatgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatgggg 1028  Q
    ||||||||| |||| || || ||||||| ||||||||||||||||||||||||||  |||||| ||||| ||||||||    
T  31318874 gcaaaaacattgaaagaagagatgaaaaagggtgatgatatgatgtaaaattact-caaatactcctaatacatgggg 31318950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 750 - 827
Target Start/End: Original strand, 36916613 - 36916690
Alignment:
Q  750 cattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||||||||||||||||||||||  || |   ||||||||||| ||||||| || ||||||| ||| ||||||||    
T  36916613 cattttagatttattcaattaatgatatatttagtctttattatagaccacatacattatttaataaataaatctaaa 36916690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 734 - 834
Target Start/End: Complemental strand, 11295790 - 11295690
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgttg 833  Q
    |||||||||||||  |||||||||||| ||||| | |||||||||| ||   | || || || ||||||| ||||||||||||||  ||||||| |||||    
T  11295790 tataaacaaaaattaacattttagattcattcattaaatgatgcatgtggtttataataaagaccacatacatcatttaatgaatgtatctaaaatgttg 11295691  T
Q  834 a 834  Q
    |    
T  11295690 a 11295690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 747 - 827
Target Start/End: Complemental strand, 24053710 - 24053630
Alignment:
Q  747 ctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||||||  || ||||| ||||||||||| |||  ||||||||||| ||||||| |||||| ||||||| || |||||    
T  24053710 ctacattttatgttcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaatgaatgaacctaaa 24053630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 734 - 806
Target Start/End: Complemental strand, 33574913 - 33574842
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaat 806  Q
    |||||||||||||| |||||||||||  ||||||||||||||| || ||  |||||||||| | |||||||||    
T  33574913 tataaacaaaaatccacattttagatacattcaattaatgatgtatgtg-gctttattatatgtcacataaat 33574842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 972 - 1028
Target Start/End: Original strand, 44081870 - 44081925
Alignment:
Q  972 atgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatgggg 1028  Q
    ||||||| |||||||||||| |||||||||||||  |||||||||||| ||||||||    
T  44081870 atgaaaaagggtgatgatataatgtaaaattact-caaatacccctaatacatgggg 44081925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 733 - 776
Target Start/End: Original strand, 3444635 - 3444678
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatg 776  Q
    |||||||||||||| ||||||||| ||| |||||||||||||||    
T  3444635 ttataaacaaaaatttacattttatattcattcaattaatgatg 3444678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 972 - 1027
Target Start/End: Original strand, 36189306 - 36189360
Alignment:
Q  972 atgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatggg 1027  Q
    ||||||||| ||||||||||||| |||||||| | ||||||||||||||| |||||    
T  36189306 atgaaaaggagtgatgatatgatataaaatta-ttaaaatacccctaacatatggg 36189360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 748 - 827
Target Start/End: Complemental strand, 38949080 - 38949001
Alignment:
Q  748 tacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||||||||| ||||| ||||||||||| ||||  |||||||||  ||||||| ||| || ||||||  ||||||||    
T  38949080 tacattttagattcattcatttaatgatgcacatgatttttattatataccacatacatcgttaaatgaacaaatctaaa 38949001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 733 - 827
Target Start/End: Complemental strand, 41387889 - 41387795
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| |||||| ||| |||||||||| ||||| | ||| ||| || ||  ||||||||||  |||| || |||||||||| ||||||||||||    
T  41387889 ttataagcaaaaaactatattttagattcattcattaaataatgtatgtggtctttattataaaccacgtacatcatttaataaattaatctaaa 41387795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 778 - 827
Target Start/End: Original strand, 10335200 - 10335249
Alignment:
Q  778 atatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||||||||||||||| |||| || |||||||||| ||| ||||||||    
T  10335200 atatgaactttattatagaccacctatatcatttaataaatgaatctaaa 10335249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 734 - 827
Target Start/End: Complemental strand, 40098886 - 40098793
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||| |||||||| || ||||||||  ||||||||||||||| || ||  |||||||||| | |||||| |||||| | |||||  |||||||    
T  40098886 tataagcaaaaatccactttttagatacattcaattaatgatgtatgtggtctttattatatgtcacatatatcattaattgaatgtatctaaa 40098793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 746 - 783
Target Start/End: Complemental strand, 43970996 - 43970959
Alignment:
Q  746 tctacattttagatttattcaattaatgatgcatatga 783  Q
    ||||||||||||||| ||||||||||||||| ||||||    
T  43970996 tctacattttagattaattcaattaatgatgtatatga 43970959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 7e-24; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 733 - 834
Target Start/End: Original strand, 37897695 - 37897796
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    |||||| |||||||||| |||||||||| ||||||||||||||| |||||| ||||||||||| ||||||| || ||||||||||| ||| |||| ||||    
T  37897695 ttataagcaaaaatctaaattttagattcattcaattaatgatgtatatgatctttattatagaccacatacataatttaatgaatgaatttaaaatgtt 37897794  T
Q  833 ga 834  Q
    ||    
T  37897795 ga 37897796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 733 - 833
Target Start/End: Complemental strand, 24075572 - 24075474
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    |||||| ||||||||||||||||||||| |||||||| |||||| |||||  ||||||  ||| |||||||||||||||||||||| |||||||| ||||    
T  24075572 ttataagcaaaaatctacattttagattcattcaattcatgatgtatatgctctttat--tagaccacataaatcatttaatgaatgaatctaaaatgtt 24075475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 733 - 834
Target Start/End: Original strand, 52215893 - 52215994
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    |||||| ||||||| ||||||||||||| || ||||| |||||| |||||| ||||||||||| ||||||| |||||||||||| | |||||||| ||||    
T  52215893 ttataagcaaaaatttacattttagattcatgcaattgatgatgtatatgatctttattatagaccacatacatcatttaatgagtgaatctaaaatgtt 52215992  T
Q  833 ga 834  Q
    ||    
T  52215993 ga 52215994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 733 - 832
Target Start/End: Original strand, 12744914 - 12745013
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    |||||| ||||||  ||||||||||||| ||||||||||||||| |||||  ||||||||||| ||||||| ||||||||||||||  ||||||| ||||    
T  12744914 ttataagcaaaaacttacattttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaatgtatctaaaatgtt 12745013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 750 - 827
Target Start/End: Original strand, 26121569 - 26121646
Alignment:
Q  750 cattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||||||| ||||||||||||||| |||||  ||||||||||| ||||||| |||||||||||||| ||||||||    
T  26121569 cattttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaataaatctaaa 26121646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 752 - 827
Target Start/End: Original strand, 26244412 - 26244487
Alignment:
Q  752 ttttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||||| ||||||||||||||| |||||  ||||||||||| ||||||| |||||||||||||| ||||||||    
T  26244412 ttttagattcattcaattaatgatgtatatggtctttattatagaccacatacatcatttaatgaataaatctaaa 26244487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 975 - 1033
Target Start/End: Complemental strand, 30735594 - 30735536
Alignment:
Q  975 aaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatggggtgtac 1033  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  30735594 aaaaagggtgatgatatgatgttaaattactaaaaatacccctaacacatggagtgtac 30735536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 733 - 827
Target Start/End: Complemental strand, 45736814 - 45736720
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||| | || |||||| ||| ||||||||||||||| | |||| ||||||||||| ||||||| |||||||||||||| ||||||||    
T  45736814 ttataagcaaaattttatattttaaattcattcaattaatgatgtacatgatctttattatagaccacatacatcatttaatgaatgaatctaaa 45736720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 733 - 827
Target Start/End: Original strand, 51060676 - 51060770
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||||| ||||||||||||| ||||||||||| ||| |||||| ||||||||||   ||| || |||||||||| ||||||||||||    
T  51060676 ttataagcaaaaatttacattttagattaattcaattaataatgtatatgatctttattatatatcacgtacatcatttaataaattaatctaaa 51060770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 750 - 827
Target Start/End: Original strand, 26243709 - 26243786
Alignment:
Q  750 cattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||||||| ||||||||||| ||| |||| | ||||||||||| ||||||| |||||||||||||| ||||||||    
T  26243709 cattttagattcattcaattaataatgtatatcatctttattatagaccacatacatcatttaatgaataaatctaaa 26243786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 974 - 1031
Target Start/End: Original strand, 29472901 - 29472957
Alignment:
Q  974 gaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatggggtgt 1031  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  29472901 gaaaagggatgatgatatgatgtaaaattact-aaaatacccctaacacatggggtgt 29472957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 751 - 834
Target Start/End: Complemental strand, 29222912 - 29222829
Alignment:
Q  751 attttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgttga 834  Q
    |||||| ||||||||||||||| ||| |||||| ||||||||||| | ||||| |||||||||| ||| |||||||| ||||||    
T  29222912 attttaaatttattcaattaataatgtatatgatctttattatagacaacatacatcatttaataaatgaatctaaaatgttga 29222829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 733 - 827
Target Start/End: Original strand, 8504863 - 8504957
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||||||||||||||||||| ||||| ||| ||||||| |||  ||||||||||| ||||||| |||||| ||| ||| || |||||    
T  8504863 ttataagcaaaaatctacattttagattcattcatttattgatgcacatggtctttattatagaccacatacatcattaaataaatgaacctaaa 8504957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 733 - 827
Target Start/End: Complemental strand, 10872799 - 10872705
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||||| || |||||||||| ||||||||||||||| |||||  ||||||||||   |||||| |||||||||||||| ||| ||||    
T  10872799 ttataagcaaaaatttatattttagattcattcaattaatgatgtatatggtctttattataaatcacatacatcatttaatgaatgaatttaaa 10872705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 733 - 818
Target Start/End: Complemental strand, 3074905 - 3074820
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaat 818  Q
    |||||| ||||||| ||||||||||||| ||||| ||||||||||| |||| ||||||| |||  |||||| |||||| |||||||    
T  3074905 ttataagcaaaaatttacattttagattcattcatttaatgatgcacatgatctttattgtagatcacatacatcattaaatgaat 3074820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 748 - 821
Target Start/End: Original strand, 14756436 - 14756509
Alignment:
Q  748 tacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaa 821  Q
    ||||||||||||||||||| ||||||||| |||||  ||||||||||| ||||||| |||||| ||| ||||||    
T  14756436 tacattttagatttattcatttaatgatgtatatggtctttattatagaccacatacatcattaaataaattaa 14756509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 733 - 834
Target Start/End: Complemental strand, 24694355 - 24694254
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    ||||||||||||||| ||||||| |||||||| ||||||||||| |||  |  ||||||||| ||  |||| |||||||||| ||| |||||||| ||||    
T  24694355 ttataaacaaaaatcaacatttttgatttatttaattaatgatgtatacaatttttattatatgcagcatacatcatttaataaatgaatctaaaatgtt 24694256  T
Q  833 ga 834  Q
    ||    
T  24694255 ga 24694254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 734 - 827
Target Start/End: Original strand, 25881150 - 25881243
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||| |||||| ||||||||||| || ||||| ||||||||||| |||  ||||||||||| ||||||| |||||| ||||||| || |||||    
T  25881150 tataagcaaaaaactacattttaggttcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaatgaatgaacctaaa 25881243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 733 - 818
Target Start/End: Original strand, 38677578 - 38677663
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaat 818  Q
    |||||| ||||| | ||||||||||||| ||||| ||||||||||| |||  ||||||||||| ||||||| |||||| |||||||    
T  38677578 ttataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaatgaat 38677663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 952 - 1028
Target Start/End: Complemental strand, 46112066 - 46111990
Alignment:
Q  952 gcaaaaacactgaa-gaggaaatgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatgggg 1028  Q
    ||||||||| |||| || || ||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  46112066 gcaaaaacattgaaagaagagatgaaaaagggtgatgatatgatgtaaaattact-aaaatacccctaatacatgggg 46111990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 972 - 1028
Target Start/End: Original strand, 21559651 - 21559706
Alignment:
Q  972 atgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatgggg 1028  Q
    ||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  21559651 atgaaaaagggtaatgatatgatgtaaaattact-aaaatacccctaacacatgggg 21559706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 736 - 832
Target Start/End: Complemental strand, 52866541 - 52866445
Alignment:
Q  736 taaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    |||||||||||  |||||||||||| ||||| | ||| ||  |||| | ||||||||||| ||||||| |||||||||||||| |||||||| ||||    
T  52866541 taaacaaaaattaacattttagattcattcattaaataatatatataatctttattatagaccacatacatcatttaatgaatgaatctaaaatgtt 52866445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 752 - 826
Target Start/End: Complemental strand, 4182039 - 4181965
Alignment:
Q  752 ttttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaa 826  Q
    ||||||||||||||||| ||||||| |||||| || |||||||| ||||||| |||||| | ||||| |||||||    
T  4182039 ttttagatttattcaatcaatgatgtatatgatctatattatagaccacatacatcattaattgaataaatctaa 4181965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 748 - 818
Target Start/End: Complemental strand, 12047356 - 12047287
Alignment:
Q  748 tacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaat 818  Q
    ||||||||||||||||||| ||||||||||| |||  ||||||||||| ||||||| |||||| |||||||    
T  12047356 tacattttagatttattcatttaatgatgcacatg-tctttattatagaccacatacatcattaaatgaat 12047287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 733 - 827
Target Start/End: Original strand, 29389340 - 29389434
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||||| || ||||||||||  |||||||||||||| |||||| |||||||||||  |||||| |||  |||||||||  |||||||    
T  29389340 ttataagcaaaaatttatattttagattcgttcaattaatgatgtatatgatctttattatagatcacatacatcgattaatgaatagatctaaa 29389434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 952 - 1025
Target Start/End: Complemental strand, 51339905 - 51339832
Alignment:
Q  952 gcaaaaacactgaa-gaggaaatgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatg 1025  Q
    ||||||||| |||| || || ||||||| |||||||||||||||||||||||||| |||||||| ||||||||||    
T  51339905 gcaaaaacattgaaagaagagatgaaaaagggtgatgatatgatgtaaaattact-aaaatacctctaacacatg 51339832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 733 - 814
Target Start/End: Complemental strand, 331925 - 331844
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaat 814  Q
    |||||| |||||||  |||||||||||| ||||| | ||||||| |||| | ||||||||||| ||||||| ||||||||||    
T  331925 ttataagcaaaaattaacattttagattcattcattaaatgatgtatataatctttattatagaccacatacatcatttaat 331844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 733 - 834
Target Start/End: Complemental strand, 27224707 - 27224606
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    |||||| |||||||   ||||||||||| ||||| | ||||||| |||| |  ||||||||||  |||||| |||||||||||||| |||||||| ||||    
T  27224707 ttataagcaaaaattagcattttagattgattcattaaatgatgtatataatttttattatagatcacatacatcatttaatgaataaatctaaaatgtt 27224608  T
Q  833 ga 834  Q
    ||    
T  27224607 ga 27224606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 733 - 785
Target Start/End: Original strand, 3972481 - 3972533
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaac 785  Q
    ||||||| |||||||||||||||||||| ||||||||||||||| || |||||    
T  3972481 ttataaataaaaatctacattttagattcattcaattaatgatgtatgtgaac 3972533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 733 - 785
Target Start/End: Complemental strand, 3997397 - 3997345
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaac 785  Q
    ||||||| |||||||||||||||||||| ||||||||||||||| || |||||    
T  3997397 ttataaataaaaatctacattttagattcattcaattaatgatgtatgtgaac 3997345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 751 - 827
Target Start/End: Original strand, 47334673 - 47334749
Alignment:
Q  751 attttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||| ||||||||||||||| ||||||  ||||||||||  || ||| |||||||||||||| ||||||||    
T  47334673 attttaaattcattcaattaatgatgtatatgatttttattatagatcatatacatcatttaatgaatgaatctaaa 47334749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 748 - 827
Target Start/End: Complemental strand, 22497063 - 22496984
Alignment:
Q  748 tacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||||||||| ||||||||||| | | ||||   |||||| |||| ||||||| |||||||||||||| ||||||||    
T  22497063 tacattttagattcattcaattaataacgtatattgtctttatcatagaccacatacatcatttaatgaatgaatctaaa 22496984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 952 - 1033
Target Start/End: Complemental strand, 34750020 - 34749938
Alignment:
Q  952 gcaaaaacactgaa-gaggaaatgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacat-ggggtgtac 1033  Q
    ||||||||| |||| || || ||||||| ||||||||||||||||||||||||||  |||||||||||| |||| |||||||||    
T  34750020 gcaaaaacattgaaagaagagatgaaaaagggtgatgatatgatgtaaaattact-caaatacccctaatacataggggtgtac 34749938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 748 - 827
Target Start/End: Complemental strand, 41743702 - 41743623
Alignment:
Q  748 tacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||||| |||| ||||| ||||||||| |||||  ||||||||||| ||| ||| |||||||||||||  ||||||||    
T  41743702 tacattttggattcattcagttaatgatgtatatggtctttattatagaccatatacatcatttaatgaacgaatctaaa 41743623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 751 - 834
Target Start/End: Complemental strand, 54595899 - 54595816
Alignment:
Q  751 attttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgttga 834  Q
    |||||||||| ||||| | ||||||| ||||   ||||||||| | ||||||| |||||||||||||| |||||||| ||||||    
T  54595899 attttagattcattcattaaatgatgtatatcgtctttattatcgaccacatacatcatttaatgaatgaatctaaaatgttga 54595816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 735 - 785
Target Start/End: Complemental strand, 3994611 - 3994561
Alignment:
Q  735 ataaacaaaaatctacattttagatttattcaattaatgatgcatatgaac 785  Q
    ||||| |||||||||||||||||||| ||||||||||||||| || |||||    
T  3994611 ataaataaaaatctacattttagattcattcaattaatgatgtatgtgaac 3994561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 733 - 823
Target Start/End: Complemental strand, 4821508 - 4821418
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatc 823  Q
    |||||| | ||||| ||||||||| ||||||||||| || |||| |||||| ||||||||| | |||||||  | ||||||||||| ||||    
T  4821508 ttataagcgaaaatttacattttaaatttattcaatcaacgatgaatatgatctttattattgaccacataccttatttaatgaatgaatc 4821418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 733 - 795
Target Start/End: Original strand, 9492689 - 9492751
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattatag 795  Q
    |||||||||||||| ||||||||||||||||| ||||||| ||| || ||  |||||||||||    
T  9492689 ttataaacaaaaatttacattttagatttatttaattaattatgtatgtggtctttattatag 9492751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 715 - 776
Target Start/End: Complemental strand, 23090096 - 23090035
Alignment:
Q  715 tacacctttcactcaccgttataaacaaaaatctacattttagatttattcaattaatgatg 776  Q
    |||||| |||| ||||  |||||||||||||| ||||| ||||||| |||||||||||||||    
T  23090096 tacaccattcaatcactattataaacaaaaatatacatgttagattcattcaattaatgatg 23090035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 734 - 795
Target Start/End: Complemental strand, 35987557 - 35987496
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattatag 795  Q
    ||||||||||| | || |||||||||||||||||||||| ||| |||||  |||||||||||    
T  35987557 tataaacaaaattttatattttagatttattcaattaataatgtatatgttctttattatag 35987496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 972 - 1025
Target Start/End: Complemental strand, 36370439 - 36370387
Alignment:
Q  972 atgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatg 1025  Q
    ||||||| ||||||||||||||||||||||||||  |||||||||||| |||||    
T  36370439 atgaaaaagggtgatgatatgatgtaaaattact-caaatacccctaatacatg 36370387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 733 - 834
Target Start/End: Original strand, 42929019 - 42929120
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    |||||| ||||| |||| |||||| ||| ||||||||||||||  || ||  |||| |||||| ||||||  |||||||| | |||||||||||| ||||    
T  42929019 ttataagcaaaattctaaattttatattcattcaattaatgatctatgtggtctttcttatagaccacatgcatcatttactaaattaatctaaaatgtt 42929118  T
Q  833 ga 834  Q
    ||    
T  42929119 ga 42929120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 741 - 810
Target Start/End: Original strand, 50466834 - 50466902
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatt 810  Q
    |||||| || |||||||||| ||||||||||||||| |||||| ||||| ||||| ||||||| ||||||    
T  50466834 aaaaatttatattttagattcattcaattaatgatgtatatgatcttta-tatagaccacatatatcatt 50466902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 733 - 814
Target Start/End: Complemental strand, 51253797 - 51253716
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaat 814  Q
    |||||| |||||||  | ||| |||||| ||||||| ||| ||| |||||||||||||||||| | ||||| ||||||||||    
T  51253797 ttataagcaaaaattaatattgtagattcattcaatcaataatgtatatgaactttattatagacaacatacatcatttaat 51253716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 734 - 827
Target Start/End: Original strand, 52315404 - 52315497
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||| |||||||| || |||||||| |||||||||||||||| || ||  |||||||||| | |||||| |||||| | |||||  |||||||    
T  52315404 tataagcaaaaatccactttttagatatattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaatgtatctaaa 52315497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 748 - 827
Target Start/End: Complemental strand, 24722799 - 24722720
Alignment:
Q  748 tacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||||||||| | ||||||||| ||| ||||    |||||||||| ||||||| |||||||||| ||| ||||||||    
T  24722799 tacattttagattcactcaattaataatgtatattgtatttattatagaccacatacatcatttaataaatgaatctaaa 24722720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 733 - 776
Target Start/End: Original strand, 27224593 - 27224636
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatg 776  Q
    ||||||||||||||| |||||||||||||||||| | |||||||    
T  27224593 ttataaacaaaaatcaacattttagatttattcattaaatgatg 27224636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 952 - 1033
Target Start/End: Original strand, 36749475 - 36749557
Alignment:
Q  952 gcaaaaacactgaa-gaggaaatgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatg-gggtgtac 1033  Q
    ||||||||| |||| || || ||||||| ||||||||||||||||||||||||||  ||||||| |||| ||||| ||||||||    
T  36749475 gcaaaaacattgaaagaagagatgaaaaagggtgatgatatgatgtaaaattact-caaatacctctaatacatgagggtgtac 36749557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 733 - 776
Target Start/End: Original strand, 43177101 - 43177144
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatg 776  Q
    |||||||||||||||||||||||| ||| ||| |||||||||||    
T  43177101 ttataaacaaaaatctacattttaaattcatttaattaatgatg 43177144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 734 - 776
Target Start/End: Original strand, 22173809 - 22173851
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatg 776  Q
    ||||| ||||||||||||||||||||  |||||||||||||||    
T  22173809 tataagcaaaaatctacattttagatacattcaattaatgatg 22173851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 741 - 827
Target Start/End: Complemental strand, 26104893 - 26104807
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| |||||||||  || ||||| ||||||||||| |||| ||||||||||| | | ||| |||||| ||||||| || |||||    
T  26104893 aaaaatttacattttaagttcattcatttaatgatgcacatgatctttattatagactatatacatcattaaatgaatgaacctaaa 26104807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 952 - 1005
Target Start/End: Original strand, 44000058 - 44000112
Alignment:
Q  952 gcaaaaacactgaa-gaggaaatgaaaaggggtgatgatatgatgtaaaattact 1005  Q
    ||||||||| |||| || || ||||||| ||||||||||||||||||||||||||    
T  44000058 gcaaaaacattgaaagaagagatgaaaaagggtgatgatatgatgtaaaattact 44000112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 734 - 827
Target Start/End: Complemental strand, 8439384 - 8439291
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||| ||||||  || ||||||| || ||||| ||||||||||| ||   ||||||||||| ||||||| |||||| ||||||| || |||||    
T  8439384 tataagcaaaaaattatattttaggttcattcatttaatgatgcacatagtctttattatagaccacatacatcattaaatgaatgaacctaaa 8439291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 751 - 832
Target Start/End: Original strand, 34327539 - 34327620
Alignment:
Q  751 attttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    |||||| ||||||| ||||||||||| ||||||  || ||||||   || ||| |||||||||||||| |||||||| ||||    
T  34327539 attttatatttatttaattaatgatgtatatgattttgattataaatcatatacatcatttaatgaatgaatctaaaatgtt 34327620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 763 - 832
Target Start/End: Complemental strand, 37807607 - 37807538
Alignment:
Q  763 ttcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    |||||||||||||| |||||  ||||||||||  ||||||| |||||| ||||||| ||| |||| ||||    
T  37807607 ttcaattaatgatgtatatggtctttattataaaccacatacatcattcaatgaataaatttaaaatgtt 37807538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 733 - 834
Target Start/End: Complemental strand, 41254058 - 41253957
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    |||||| |||||||| |||||||||||  ||| | | ||||||| || | |  |||||||||  ||||||| |||||||||||||| ||| |||| ||||    
T  41254058 ttataagcaaaaatcaacattttagatacatttattaaatgatgtatgtaatatttattataaaccacatacatcatttaatgaatgaatataaaatgtt 41253959  T
Q  833 ga 834  Q
    ||    
T  41253958 ga 41253957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 766 - 827
Target Start/End: Complemental strand, 43599192 - 43599131
Alignment:
Q  766 aattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||||||| |||| | |||||||||||  |||||| ||||||||| |||| ||||||||    
T  43599192 aattaatgatgtatattatctttattatagatcacatacatcatttaaggaatgaatctaaa 43599131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 733 - 834
Target Start/End: Complemental strand, 50745093 - 50744992
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    ||||||| |||||| ||||||||| |||  || ||||||||||| ||||    |||||||||   |||||| |||||||||| ||| |||||||| ||||    
T  50745093 ttataaataaaaatttacattttatattcgtttaattaatgatgtatatagtatttattataaatcacatacatcatttaataaataaatctaaaatgtt 50744994  T
Q  833 ga 834  Q
    ||    
T  50744993 ga 50744992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 55; Significance: 5e-22; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 733 - 827
Target Start/End: Complemental strand, 146095 - 146001
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||||||||||| | ||||||||||| ||||||||||||||| |||||  ||||||| ||| ||||||| |||||||||||||| ||||||||    
T  146095 ttataaacaaaaatttgcattttagattcattcaattaatgatgtatatggtctttattttagaccacatacatcatttaatgaatgaatctaaa 146001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 733 - 817
Target Start/End: Complemental strand, 7784 - 7700
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaa 817  Q
    |||||| ||||||||||||||||||||| ||||| ||||||||||| |||  ||||||||||| ||||||| |||||| ||||||    
T  7784 ttataagcaaaaatctacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaatgaa 7700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 733 - 832
Target Start/End: Original strand, 216286 - 216385
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    ||||| |||||||| || |||||| ||| ||| |||||||||||||||||| ||||||||||  | ||||| |||||||||||||||||| |||| ||||    
T  216286 ttatatacaaaaatttatattttaaattcatttaattaatgatgcatatgatctttattataaacgacatacatcatttaatgaattaatttaaaatgtt 216385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 5e-22; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 733 - 827
Target Start/End: Original strand, 13281547 - 13281641
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| |||||||||| |||||||||| ||||||||||||||| |||||| |||| |||||| ||||||| |||||||||| ||| ||||||||    
T  13281547 ttataagcaaaaatctagattttagattcattcaattaatgatgtatatgatctttcttatagtccacatacatcatttaatcaatgaatctaaa 13281641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 733 - 810
Target Start/End: Complemental strand, 12383716 - 12383639
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatt 810  Q
    |||||||||||||||||||||||||||| ||||||||||||||| | |||| ||||||||||| | ||||| ||||||    
T  12383716 ttataaacaaaaatctacattttagattaattcaattaatgatgtacatgatctttattatagactacatacatcatt 12383639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 748 - 827
Target Start/End: Original strand, 2827587 - 2827666
Alignment:
Q  748 tacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||||||||| ||| | ||||||||| |||||||||||||||||| ||||||  |||||||||| ||| ||||||||    
T  2827587 tacattttagattcatttatttaatgatgtatatgaactttattatagaccacatgcatcatttaataaatgaatctaaa 2827666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 727 - 794
Target Start/End: Complemental strand, 11746361 - 11746294
Alignment:
Q  727 tcaccgttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattata 794  Q
    |||| |||||||| |||||| ||||||||||||| ||||||||||||||| |||||| ||||||||||    
T  11746361 tcactgttataaaaaaaaatttacattttagattcattcaattaatgatgtatatgatctttattata 11746294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 733 - 827
Target Start/End: Complemental strand, 12383914 - 12383820
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||||||||||||||||| | ||||||||||| ||| ||||   ||||||||||| ||| ||| |  ||||||||||||||||||||    
T  12383914 ttataagcaaaaatctacattttagactcattcaattaattatgtatatattctttattatagaccatatacactatttaatgaattaatctaaa 12383820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 721 - 827
Target Start/End: Complemental strand, 20704162 - 20704056
Alignment:
Q  721 tttcactcaccgttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaatta 820  Q
    ||||| |||| ||||||| ||||| | |||||| || ||||||||||||||||||| |||||  ||||||||||| ||||||| || ||| ||||||| |    
T  20704162 tttcagtcactgttataatcaaaattttacattctaaatttattcaattaatgatgtatatggtctttattatagaccacatatattattgaatgaatga 20704063  T
Q  821 atctaaa 827  Q
    || ||||    
T  20704062 atttaaa 20704056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 733 - 827
Target Start/End: Complemental strand, 28555074 - 28554980
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||||||||||||||||||| ||| | ||||||||||| |||  ||||||||||| ||| ||| |||||| ||||||| || |||||    
T  28555074 ttataagcaaaaatctacattttagattcatttatttaatgatgcacatggtctttattatagaccatatacatcattaaatgaatgaacctaaa 28554980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 733 - 827
Target Start/End: Complemental strand, 31398353 - 31398259
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||| | ||||||||||||| ||||| ||||||||||| |||  ||||||||||| ||||||| |||||| ||||||| || |||||    
T  31398353 ttataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaatgaatgaacctaaa 31398259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 716 - 834
Target Start/End: Original strand, 31996495 - 31996613
Alignment:
Q  716 acacctttcactcaccgttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatg 815  Q
    |||||||||  ||||| |||||| |||||||| |||||| ||||| ||||||||||| ||| |||||   |||||||||| | ||||| ||||||||||     
T  31996495 acacctttcggtcaccattataagcaaaaatcaacatttcagattcattcaattaataatgtatatggtatttattatagactacatacatcatttaata 31996594  T
Q  816 aattaatctaaattgttga 834  Q
    ||| || ||||| ||||||    
T  31996595 aatgaacctaaaatgttga 31996613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 748 - 827
Target Start/End: Original strand, 11637198 - 11637276
Alignment:
Q  748 tacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||||| ||| ||||||||||||||| |||||| ||||||||||| ||| ||||| |||||||||||| ||| ||||    
T  11637198 tacattttaaattcattcaattaatgatgtatatgatctttattatagaccaaataaa-catttaatgaatgaatataaa 11637276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 741 - 827
Target Start/End: Original strand, 14310542 - 14310628
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||||||||||||  || ||||| ||||||||||| |||  ||||||||||  ||||||| |||||| ||||||| ||||||||    
T  14310542 aaaaatctacattttatgttcattcatttaatgatgcacatggtctttattatataccacatacatcattaaatgaatgaatctaaa 14310628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 734 - 827
Target Start/End: Complemental strand, 6560783 - 6560690
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||| ||||||  ||||||||||||| ||||| ||||||||||| ||   ||||||||||| ||||||| |||||| ||||||| || |||||    
T  6560783 tataagcaaaaaattacattttagattcattcatttaatgatgcacatagtctttattatagaccacatacatcattaaatgaatgaacctaaa 6560690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 734 - 827
Target Start/End: Complemental strand, 8146075 - 8145982
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||| ||||||  ||||||||||||| ||||| ||||||||| | |||  ||||||||||| ||||||| |||||| ||||||| || |||||    
T  8146075 tataagcaaaaaattacattttagattcattcatttaatgatgtacatggtctttattatagaccacatacatcattaaatgaatgaacctaaa 8145982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 733 - 823
Target Start/End: Complemental strand, 8449703 - 8449611
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttat--tataggccacataaatcatttaatgaattaatc 823  Q
    |||||| |||||||  | |||||||||| |||||||||||||||||||||| ||| ||  ||||| ||||||| |||||||| ||||| ||||    
T  8449703 ttataagcaaaaattaatattttagattcattcaattaatgatgcatatgatcttgattatatagaccacatacatcatttattgaataaatc 8449611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 733 - 823
Target Start/End: Complemental strand, 8458507 - 8458415
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttat--tataggccacataaatcatttaatgaattaatc 823  Q
    |||||| |||||||  | |||||||||| |||||||||||||||||||||| ||| ||  ||||| ||||||| |||||||| ||||| ||||    
T  8458507 ttataagcaaaaattaatattttagattcattcaattaatgatgcatatgatcttgattatatagaccacatacatcatttattgaataaatc 8458415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 972 - 1033
Target Start/End: Original strand, 13697658 - 13697718
Alignment:
Q  972 atgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatggggtgtac 1033  Q
    ||||||| ||||||||||||||| |||||||||| |||||| | ||||||||||||||||||    
T  13697658 atgaaaacgggtgatgatatgatataaaattact-aaaatatctctaacacatggggtgtac 13697718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 741 - 834
Target Start/End: Complemental strand, 31158961 - 31158869
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgttga 834  Q
    |||||||||||||||||||| ||| ||||||||||  | |||| ||||||||||| ||||||| || ||| ||| ||| |||||||| ||||||    
T  31158961 aaaaatctacattttagattcattaaattaatgatata-atgatctttattatagaccacatacattattcaattaataaatctaaaatgttga 31158869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 741 - 834
Target Start/End: Complemental strand, 31714654 - 31714561
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgttga 834  Q
    ||||||||||||||||| || ||||||||||||||| ||||||  |||||||||   || ||| ||| |||||||||| || ||||| ||||||    
T  31714654 aaaaatctacattttaggttcattcaattaatgatgtatatgatatttattatatatcatatacatcgtttaatgaatgaaactaaaatgttga 31714561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 754 - 834
Target Start/End: Complemental strand, 12218551 - 12218471
Alignment:
Q  754 ttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgttga 834  Q
    ||||||| ||||||||||||||| ||| || |||||||||||   ||||| |||||||||||||| ||| |||| ||||||    
T  12218551 ttagattcattcaattaatgatgtataagatctttattatagattacatatatcatttaatgaatgaatataaaatgttga 12218471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 751 - 827
Target Start/End: Original strand, 15517121 - 15517197
Alignment:
Q  751 attttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||||||| ||||| | ||||||| ||||   ||||||||||| ||||||| |||||||||||||| ||||||||    
T  15517121 attttagattcattcattaaatgatgtatatcgtctttattatagaccacatacatcatttaatgaatgaatctaaa 15517197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 751 - 834
Target Start/End: Original strand, 34379766 - 34379849
Alignment:
Q  751 attttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgttga 834  Q
    |||||||||| ||||| | ||||||| ||||   ||||||||| | ||||||| |||||||||||||| |||||||| ||||||    
T  34379766 attttagattcattcattaaatgatgtatatcgtctttattatcgaccacatacatcatttaatgaatgaatctaaaatgttga 34379849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 733 - 827
Target Start/End: Complemental strand, 3199845 - 3199751
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||||  ||||||||| ||| |||||||||||  || |||||| ||||||||||  ||||||| | |||||||||||| ||| ||||    
T  3199845 ttataagcaaaaacttacattttatattcattcaattaatagtgtatatgatctttattataaaccacatacaacatttaatgaatgaatttaaa 3199751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 752 - 834
Target Start/End: Complemental strand, 10258412 - 10258330
Alignment:
Q  752 ttttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgttga 834  Q
    ||||||||| ||||||||||||||| |||||  | ||||||||| |||  || |||||||||| ||| |||||||| ||||||    
T  10258412 ttttagattcattcaattaatgatgtatatggtcattattatagaccatgtacatcatttaataaatgaatctaaaatgttga 10258330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 952 - 1033
Target Start/End: Original strand, 14023003 - 14023084
Alignment:
Q  952 gcaaaaacactgaa-gaggaaatgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatggggtgtac 1033  Q
    ||||||||| |||| || || |||| ||||||||| ||| |||||| |||||||||||| ||||||||||||||| |||||||    
T  14023003 gcaaaaacattgaaagaagagatgacaaggggtgacgatgtgatgtgaaattactaaaa-tacccctaacacatgaggtgtac 14023084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 751 - 827
Target Start/End: Original strand, 6263381 - 6263458
Alignment:
Q  751 attttagatttattcaattaa-tgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||||||| |||||||||| ||||| |||||| ||||||||||  ||||| | |||||||||||||  ||||||||    
T  6263381 attttagattaattcaattaaatgatgtatatgatctttattatataccacacacatcatttaatgaaggaatctaaa 6263458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 734 - 827
Target Start/End: Original strand, 7158270 - 7158363
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||| ||||||||||  ||||||||||||||||| ||||||| || ||  ||||||| ||| | | ||| |||||||| ||||| ||||||||    
T  7158270 tataagcaaaaatctatgttttagatttattcaataaatgatgtatgtggtctttattgtagacaatatacatcatttattgaatgaatctaaa 7158363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 733 - 794
Target Start/End: Complemental strand, 14218324 - 14218263
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattata 794  Q
    |||||| || |||||||||||||| ||||||| ||||||||||| |||||  ||||||||||    
T  14218324 ttataagcataaatctacattttaaatttatttaattaatgatgtatatggtctttattata 14218263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 952 - 1032
Target Start/End: Original strand, 24208513 - 24208593
Alignment:
Q  952 gcaaaaacactgaa-gaggaaatgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatggggtgta 1032  Q
    ||||||||| |||| || || ||||||| |||||| ||| |||||| |||||||| ||||||||||||||||||| ||||||    
T  24208513 gcaaaaacattgaaagaagagatgaaaaagggtgaggatgtgatgtgaaattact-aaaatacccctaacacatgaggtgta 24208593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 734 - 827
Target Start/End: Original strand, 30397739 - 30397831
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||||||||||| |||||||||||  ||||||||||||||| || ||  |||||||||| | |||||| |||||| | |||||  |||||||    
T  30397739 tataaacaaaaatccacattttagatacattcaattaatgatgtatgtg-gctttattatatgtcacatacatcattaattgaatgtatctaaa 30397831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 751 - 827
Target Start/End: Complemental strand, 18886417 - 18886341
Alignment:
Q  751 attttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||||| | ||||||||||| | | ||||   ||||||||||| ||||||| |||||||||||||| ||||||||    
T  18886417 attttagagtcattcaattaataacgtatattgcctttattatagaccacatatatcatttaatgaatgaatctaaa 18886341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 733 - 832
Target Start/End: Original strand, 13506847 - 13506946
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    |||||| ||||| | ||||| ||| ||| ||| ||||||||||| |||||| ||||||||||| | | ||  |||||||||||||| ||| |||| ||||    
T  13506847 ttataagcaaaagtttacatcttaaattcatttaattaatgatgtatatgatctttattatagactagatgcatcatttaatgaataaatttaaaatgtt 13506946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 737 - 775
Target Start/End: Complemental strand, 1875088 - 1875050
Alignment:
Q  737 aaacaaaaatctacattttagatttattcaattaatgat 775  Q
    ||||||||||| |||||||||||||||||||| ||||||    
T  1875088 aaacaaaaatcaacattttagatttattcaataaatgat 1875050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 952 - 1029
Target Start/End: Complemental strand, 3987027 - 3986950
Alignment:
Q  952 gcaaaaacactgaa-gaggaaatgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatggggt 1029  Q
    ||||||||| |||| || || |||||||||| |||| ||||||||||||||||||  |||||||| ||| |||||||||    
T  3987027 gcaaaaacattgaaagaagagatgaaaagggatgataatatgatgtaaaattact-caaatacccttaatacatggggt 3986950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 741 - 775
Target Start/End: Original strand, 31759938 - 31759972
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgat 775  Q
    ||||||| |||||||||||||||||||||||||||    
T  31759938 aaaaatcaacattttagatttattcaattaatgat 31759972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 733 - 795
Target Start/End: Original strand, 34170091 - 34170153
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattatag 795  Q
    ||||||||||||||| |||||||||||| ||||| | ||||||| || ||| || ||||||||    
T  34170091 ttataaacaaaaatcaacattttagattcattcattaaatgatgtatgtgatctatattatag 34170153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 734 - 827
Target Start/End: Complemental strand, 17773627 - 17773534
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||| ||||||||||| ||||||||  ||||||||||||||| || |||  | || || || ||||||| |||||||| |||||  |||||||    
T  17773627 tataagcaaaaatctactttttagatacattcaattaatgatgtatgtgatatataataaagaccacatacatcatttattgaatgtatctaaa 17773534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 734 - 827
Target Start/End: Complemental strand, 21506589 - 21506496
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||| ||||||| ||  ||||||||  ||||||||||||||| || ||| |||||||||| | |||||| |||||| | |||||  |||||||    
T  21506589 tataagcaaaaatttaatttttagatacattcaattaatgatgtatgtgatctttattatatgtcacatacatcattaattgaatgtatctaaa 21506496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 2e-21; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 733 - 826
Target Start/End: Original strand, 71272 - 71364
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaa 826  Q
    |||||| |||||||||| |||||||||| ||||||||||||||| |||||| ||||||||||| ||||||| | |||||||||||| |||||||    
T  71272 ttataagcaaaaatctatattttagattcattcaattaatgatgtatatgatctttattatagaccacataca-catttaatgaatgaatctaa 71364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 734 - 818
Target Start/End: Original strand, 11795750 - 11795834
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaat 818  Q
    ||||| |||||||| |||||||||||| ||||||||||||||| |||||  ||||||||||| ||||||| ||||||||||||||    
T  11795750 tataagcaaaaatcaacattttagattcattcaattaatgatgtatatggtctttattatagaccacatatatcatttaatgaat 11795834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 952 - 1033
Target Start/End: Complemental strand, 1815738 - 1815657
Alignment:
Q  952 gcaaaaacactgaa-gaggaaatgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatggggtgtac 1033  Q
    ||||||||| |||| || || |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  1815738 gcaaaaacattgaaagaagagatgaaaaggggtgatgatatgatgtaaaattact-aaaatacccctaacacatagggtgtac 1815657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 742 - 832
Target Start/End: Complemental strand, 3100523 - 3100433
Alignment:
Q  742 aaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    ||||| ||||||||||||| ||||||||||||||| |||||| ||||||||||| | ||||| |||||||| ||||| |||||||| ||||    
T  3100523 aaaatttacattttagattcattcaattaatgatgtatatgatctttattatagactacatacatcatttattgaatgaatctaaaatgtt 3100433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 733 - 827
Target Start/End: Original strand, 14153382 - 14153476
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||||||||| ||||| ||| ||||| |||||||||||||||| ||||||||||| ||||||| |||||| ||||||| || |||||    
T  14153382 ttataagcaaaaatctactttttatattcattcatttaatgatgcatatgatctttattatagaccacatatatcattaaatgaatgaacctaaa 14153476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 733 - 827
Target Start/End: Complemental strand, 18033482 - 18033388
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||||||||||||||||||||||||| ||||||||| | |||  ||||||||||| ||||||| |||||| ||||||| || |||||    
T  18033482 ttataagcaaaaatctacattttagatttattcatttaatgatgtacatggtctttattatagaccacatacatcattaaatgaatgaacctaaa 18033388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 972 - 1033
Target Start/End: Original strand, 31800648 - 31800708
Alignment:
Q  972 atgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatggggtgtac 1033  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  31800648 atgaaaaggggtgatgatatgatgtaaaattact-aaaatacccctaacatatggggtgtac 31800708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 733 - 827
Target Start/End: Complemental strand, 20518298 - 20518204
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||||||||| ||||| ||| ||||| ||||||||||| |||  ||||||||||| ||||||| |||||| ||||||| ||||||||    
T  20518298 ttataagcaaaaatctactttttacattcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaatgaataaatctaaa 20518204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 734 - 832
Target Start/End: Complemental strand, 25773369 - 25773271
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    ||||||||||||| ||||||||| ||| | ||||||||||||| |||||  |||||||||||  || ||| |||||||||||||| |||||||| ||||    
T  25773369 tataaacaaaaatttacattttacattcaatcaattaatgatgtatatggtctttattatagatcaaatacatcatttaatgaatgaatctaaaatgtt 25773271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 733 - 827
Target Start/End: Complemental strand, 35032397 - 35032303
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||||| ||||||||||||| ||||||||||| ||| ||||||  ||| |||||| | ||||| |||||||||||||| ||||||||    
T  35032397 ttataagcaaaaatttacattttagattcattcaattaattatgtatatgatttttgttatagactacatacatcatttaatgaatgaatctaaa 35032303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 733 - 834
Target Start/End: Original strand, 694219 - 694320
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    |||||||||||||| || |||||| ||||||||||||||| ||| |||||| ||||||||||| ||||||| || ||||| | ||| || ||||| ||||    
T  694219 ttataaacaaaaatataaattttaaatttattcaattaattatgtatatgatctttattatagaccacatacataatttattaaataaacctaaaatgtt 694318  T
Q  833 ga 834  Q
    ||    
T  694319 ga 694320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 733 - 802
Target Start/End: Complemental strand, 43482899 - 43482830
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacat 802  Q
    |||||||||||||| ||||||||| ||||||||| ||||||||| |||||| ||||||||||| ||||||    
T  43482899 ttataaacaaaaatttacattttatatttattcatttaatgatgtatatgatctttattatagaccacat 43482830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 733 - 825
Target Start/End: Original strand, 26141768 - 26141860
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatcta 825  Q
    |||||| ||||| | ||||||||||||| ||||| ||||||||||| |||  ||||||||||| ||||||| |||||| ||||||| ||||||    
T  26141768 ttataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaatgaatgaatcta 26141860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 748 - 827
Target Start/End: Complemental strand, 22650968 - 22650889
Alignment:
Q  748 tacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||||||||||||| | ||||||||| |||||  ||||||||||| ||||||| |||||||||| ||| ||||||||    
T  22650968 tacattttagatttatttatttaatgatgtatatggtctttattatagaccacatacatcatttaataaatgaatctaaa 22650889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 734 - 827
Target Start/End: Complemental strand, 5259511 - 5259418
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||| |||||| |||||||||||||| ||||| ||||||||||| ||   ||||||||||| ||||||| |||||| ||||||| || |||||    
T  5259511 tataagcaaaaaactacattttagattcattcatttaatgatgcacatagtctttattatagaccacatacatcattaaatgaatgaacctaaa 5259418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 750 - 834
Target Start/End: Original strand, 36169073 - 36169157
Alignment:
Q  750 cattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgttga 834  Q
    |||||||||||||||||| |||||||| | ||| |||||||||||  | ||||| |||||||||||||| ||| |||| ||||||    
T  36169073 cattttagatttattcaactaatgatgtacatggactttattataaactacatatatcatttaatgaataaatataaaatgttga 36169157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 751 - 827
Target Start/End: Complemental strand, 38370496 - 38370420
Alignment:
Q  751 attttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||||| ||||||||||| |||||| ||||||||||| | ||||| |||||||||||||  ||||||||    
T  38370496 attttatatttatttaattaatgatgtatatgatctttattatagactacatacatcatttaatgaacgaatctaaa 38370420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 733 - 827
Target Start/End: Original strand, 28518731 - 28518829
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaat----gatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| |||||||| ||||||| |||| |||||||||||    |||  | |||| ||||||||||| ||||||| |||||||||||||| ||||||||    
T  28518731 ttataagcaaaaatcaacattttggattcattcaattaattaatgattaaaatgatctttattatagaccacatacatcatttaatgaatcaatctaaa 28518829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 734 - 827
Target Start/End: Original strand, 33075079 - 33075172
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||| ||||| | || |||||||||| ||||||||||| | | |||||| ||||| ||||| ||||||| |||||||||||||| || |||||    
T  33075079 tataagcaaaactttatattttagattcattcaattaataacgtatatgatctttactatagaccacatacatcatttaatgaatgaacctaaa 33075172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 734 - 818
Target Start/End: Original strand, 7738426 - 7738510
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaat 818  Q
    ||||| |||||| ||||||||||| || ||  | ||||||||||| |||| ||||||||||| ||||||| |||||| |||||||    
T  7738426 tataagcaaaaaactacattttaggttcatcgatttaatgatgcacatgatctttattatagaccacatacatcattaaatgaat 7738510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 739 - 827
Target Start/End: Original strand, 17153442 - 17153530
Alignment:
Q  739 acaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||||| |||| |||||||| |||||||||||||||  ||||| ||||||||||   |||||| ||||||||| |||| ||| ||||    
T  17153442 acaaaaatgtacaatttagattcattcaattaatgatgtgtatgatctttattatacatcacatacatcatttaacgaatgaatttaaa 17153530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 972 - 1028
Target Start/End: Original strand, 39371017 - 39371072
Alignment:
Q  972 atgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatgggg 1028  Q
    ||||||| ||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  39371017 atgaaaaagggtgatgatatgatgtaaaattact-caaatacccctaatacatgggg 39371072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 733 - 827
Target Start/End: Complemental strand, 1100184 - 1100090
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||| | | ||||||||||| ||||| | ||||||| || |   ||||||||||| ||||||| |||||||||||||| ||||||||    
T  1100184 ttataagcaaaactttgcattttagattaattcattaaatgatgtatgtagtctttattatagaccacatacatcatttaatgaatgaatctaaa 1100090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 733 - 834
Target Start/End: Complemental strand, 14772673 - 14772574
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    |||||| ||||| | || |||||||||| ||||||||||||||| ||||   ||||||||||| ||||  | |||||||||||||| || ||||| ||||    
T  14772673 ttataagcaaaactttatattttagattaattcaattaatgatgtatatagtctttattatagaccac--acatcatttaatgaatgaacctaaaatgtt 14772576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 952 - 1028
Target Start/End: Original strand, 2237345 - 2237421
Alignment:
Q  952 gcaaaaacactgaa-gaggaaatgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatgggg 1028  Q
    ||||||||| |||| || || ||||||| ||||||||||||||||||||||||||  |||||||||||| || |||||    
T  2237345 gcaaaaacattgaaagaagagatgaaaaagggtgatgatatgatgtaaaattact-caaatacccctaatacttgggg 2237421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 733 - 782
Target Start/End: Complemental strand, 4082865 - 4082816
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatg 782  Q
    ||||||||||||||  |||||||||||||||||||| ||||||| |||||    
T  4082865 ttataaacaaaaattcacattttagatttattcaataaatgatgtatatg 4082816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 733 - 834
Target Start/End: Original strand, 4297211 - 4297311
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    |||||| |||||||||||| || ||||||||||||||||||||| |||||   |||||||||   || ||| |||||||||| ||| ||| |||| ||||    
T  4297211 ttataagcaaaaatctacaatt-agatttattcaattaatgatgtatatgttatttattatatatcaaatacatcatttaattaatgaatataaaatgtt 4297309  T
Q  833 ga 834  Q
    ||    
T  4297310 ga 4297311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 952 - 1028
Target Start/End: Complemental strand, 9408161 - 9408085
Alignment:
Q  952 gcaaaaacactgaa-gaggaaatgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatgggg 1028  Q
    ||||||||| |||| || || ||||||| ||||||||||||||||||||||||||  |||||||||||| | ||||||    
T  9408161 gcaaaaacattgaaagaagagatgaaaaagggtgatgatatgatgtaaaattact-caaatacccctaatatatgggg 9408085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 727 - 827
Target Start/End: Complemental strand, 29177844 - 29177746
Alignment:
Q  727 tcaccgttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaa 826  Q
    |||| ||||||||||||||| ||||||||||||| |||||||||| |   | |||   ||||||| ||| ||||||| ||||||||||| || |||||||    
T  29177844 tcactgttataaacaaaaatttacattttagattcattcaattaacg--tcgtatagtctttattgtagaccacatacatcatttaatgtataaatctaa 29177747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 734 - 794
Target Start/End: Original strand, 13157347 - 13157407
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattata 794  Q
    ||||| |||||||| || |||||||| |||||||||||||||| |||||  ||||||||||    
T  13157347 tataagcaaaaatccactttttagatatattcaattaatgatgtatatggtctttattata 13157407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 733 - 781
Target Start/End: Complemental strand, 15549452 - 15549404
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatat 781  Q
    ||||||||||||||| |||||||||||| ||||||||||| ||| ||||    
T  15549452 ttataaacaaaaatcaacattttagattcattcaattaataatgtatat 15549404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 732 - 812
Target Start/End: Complemental strand, 26432616 - 26432536
Alignment:
Q  732 gttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcattta 812  Q
    ||||||| ||||||| || |||||||||||||||| | ||  |||||| ||| |||||||| || ||| ||||||||||||    
T  26432616 gttataatcaaaaatttatattttagatttattcattgaactatgcatgtgacctttattaaagaccatataaatcattta 26432536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 733 - 781
Target Start/End: Complemental strand, 32398130 - 32398082
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatat 781  Q
    ||||||||||||||||| |||||| ||| ||||||||||||||| ||||    
T  32398130 ttataaacaaaaatctatattttaaattcattcaattaatgatgtatat 32398082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 732 - 827
Target Start/End: Original strand, 1100069 - 1100164
Alignment:
Q  732 gttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||| ||||| | ||||||||||||| ||||| | ||||||| || ||  || || || || | ||||| |||||||||||||||||||||||    
T  1100069 gttataagcaaaagtttacattttagattcattcattaaatgatgtatgtggtctataataaagactacatacatcatttaatgaattaatctaaa 1100164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 733 - 800
Target Start/End: Complemental strand, 5984110 - 5984043
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccac 800  Q
    |||||| ||||| | | ||||||||||| ||||||||||||||| |||||  ||||||||||| ||||    
T  5984110 ttataagcaaaactttgcattttagattcattcaattaatgatgtatatggtctttattatagaccac 5984043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 764 - 827
Target Start/End: Complemental strand, 31963615 - 31963552
Alignment:
Q  764 tcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||||||||| |||||  ||||||||||| | ||||| |||||||||| ||| ||||||||    
T  31963615 tcaattaatgatgtatatggtctttattatagactacatacatcatttaataaatgaatctaaa 31963552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 752 - 818
Target Start/End: Complemental strand, 2673955 - 2673889
Alignment:
Q  752 ttttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaat 818  Q
    ||||||||||||||||| |||||||||| |   || |||||||| ||||||| |||||||| |||||    
T  2673955 ttttagatttattcaataaatgatgcatgtagtctatattatagaccacatacatcatttattgaat 2673889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 733 - 834
Target Start/End: Original strand, 7505108 - 7505210
Alignment:
Q  733 ttataaacaaaaa-tctacattttagatttattcaattaatgatgcatatgaact--ttattataggccacataaatcatttaatgaattaatctaaatt 829  Q
    ||||||||||||| |||| |||||||||| ||||| |||| |||  ||||| |||  |||||||||  |||||| |||||||||||||| |||| ||| |    
T  7505108 ttataaacaaaaaatctatattttagattgattcatttaaagat--atatgtactatttattatagatcacatacatcatttaatgaatgaatccaaaat 7505205  T
Q  830 gttga 834  Q
    |||||    
T  7505206 gttga 7505210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 733 - 775
Target Start/End: Original strand, 31154688 - 31154730
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgat 775  Q
    ||||||| |||||| ||| ||||||||||||||||||||||||    
T  31154688 ttataaataaaaatttaccttttagatttattcaattaatgat 31154730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 741 - 827
Target Start/End: Complemental strand, 31691378 - 31691292
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| || |||| ||||| ||||||||||||||| ||||    ||||||| || ||||||| || ||||||||||| ||||||||    
T  31691378 aaaaatttatatttgagattcattcaattaatgatgtatatattatttattacagaccacatacataatttaatgaatgaatctaaa 31691292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 733 - 775
Target Start/End: Original strand, 36895050 - 36895092
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgat 775  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||    
T  36895050 ttataaacaaaattctacattttaaatttatttaattaatgat 36895092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 952 - 1009
Target Start/End: Complemental strand, 40888064 - 40888006
Alignment:
Q  952 gcaaaaacactgaa-gaggaaatgaaaaggggtgatgatatgatgtaaaattactaaaa 1009  Q
    ||||||||| |||| || || ||||||| ||||| ||||||||||||||||||||||||    
T  40888064 gcaaaaacattgaaagaagagatgaaaaagggtggtgatatgatgtaaaattactaaaa 40888006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 741 - 794
Target Start/End: Complemental strand, 780777 - 780724
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattata 794  Q
    |||||| || |||||| ||| ||||||||||||||| |||||| ||||||||||    
T  780777 aaaaatatatattttaaattcattcaattaatgatgtatatgatctttattata 780724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 733 - 782
Target Start/End: Complemental strand, 37067892 - 37067843
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatg 782  Q
    |||||| ||||||||||||||||||||| | | ||||||||||| |||||    
T  37067892 ttataagcaaaaatctacattttagattcaattaattaatgatgtatatg 37067843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 734 - 827
Target Start/End: Original strand, 37944616 - 37944709
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||| |||||||  || ||||||||  ||||||||||||||| || ||| |||||||||| | |||||| |||||| | |||||  |||||||    
T  37944616 tataagcaaaaattcactttttagatacattcaattaatgatgtatgtgatctttattatatgtcacatacatcattaattgaatgtatctaaa 37944709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 53; Significance: 7e-21; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 734 - 834
Target Start/End: Complemental strand, 40579 - 40479
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgttg 833  Q
    ||||| |||||||| | ||||| ||||||||||||||||| || |||||| ||||||||||| || |||| |||||||||||||| |||||||| |||||    
T  40579 tataagcaaaaatcaatattttggatttattcaattaatgttgtatatgatctttattatagaccgcatacatcatttaatgaataaatctaaaatgttg 40480  T
Q  834 a 834  Q
    |    
T  40479 a 40479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 1e-19; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 975 - 1033
Target Start/End: Complemental strand, 42221061 - 42221003
Alignment:
Q  975 aaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatggggtgtac 1033  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  42221061 aaaaggggtgatgatatgatgttaaattactaaaaatacccctaacacatggagtgtac 42221003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 733 - 832
Target Start/End: Original strand, 6847289 - 6847388
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    |||||| ||||||| | ||||||| ||||||||||||||||||| |||||| ||||||||| |  |||||| || ||||||||||| |||||||| ||||    
T  6847289 ttataagcaaaaatttgcattttatatttattcaattaatgatgtatatgatctttattatggaacacatacataatttaatgaatgaatctaaaatgtt 6847388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 727 - 834
Target Start/End: Complemental strand, 30138921 - 30138814
Alignment:
Q  727 tcaccgttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaa 826  Q
    |||| |||||||  |||||| ||||||||||||| ||||||||||||||| ||||   ||||||||||| ||||| | |||||||||||||| |||| ||    
T  30138921 tcactgttataagtaaaaatttacattttagattcattcaattaatgatgtatatagtctttattatagaccacacacatcatttaatgaatgaatccaa 30138822  T
Q  827 attgttga 834  Q
    | ||||||    
T  30138821 aatgttga 30138814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 733 - 827
Target Start/End: Original strand, 6455562 - 6455656
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||||| ||||||||||||| ||||| ||||||||||| |||  ||||||||||| ||||||| |||||| ||||||| || |||||    
T  6455562 ttataagcaaaaatttacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaatgaatgaacctaaa 6455656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 733 - 827
Target Start/End: Complemental strand, 8447844 - 8447750
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||||||||||||||||||| ||||| | ||||||||| |||| ||||||||||| ||| ||| |||||| ||||||| || |||||    
T  8447844 ttataagcaaaaatctacattttagattcattcattgaatgatgcacatgatctttattatagaccatatacatcattaaatgaatgaacctaaa 8447750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 741 - 827
Target Start/End: Complemental strand, 21586933 - 21586847
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||| | |||||||||| ||||||||||||||| |||||| ||||||||||| ||||||| |||||| ||| ||| ||||||||    
T  21586933 aaaaatcaatattttagattcattcaattaatgatgtatatgatctttattatagaccacatacatcattgaataaatgaatctaaa 21586847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 741 - 832
Target Start/End: Complemental strand, 10095838 - 10095747
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    ||||| |||||||||||||||||| | ||||| ||| |||||  |||||| |||| ||||||| |||||||||||||| |||||||| ||||    
T  10095838 aaaaaactacattttagatttatttatttaattatgtatatggtctttatcatagaccacatacatcatttaatgaatgaatctaaaatgtt 10095747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 972 - 1027
Target Start/End: Complemental strand, 45782761 - 45782707
Alignment:
Q  972 atgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatggg 1027  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  45782761 atgaaaaagggtgatgatatgatgtaaaattact-aaaatacccctaacacatggg 45782707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 741 - 827
Target Start/End: Original strand, 41803743 - 41803829
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||||||||||||||||||||| | ||||||||||| |||  ||||||||||| ||| ||| |||||| ||||||| || |||||    
T  41803743 aaaaatctacattttagatttatttatttaatgatgcacatggtctttattatagaccatatacatcattaaatgaatgaacctaaa 41803829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 750 - 827
Target Start/End: Complemental strand, 23797458 - 23797381
Alignment:
Q  750 cattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||||||| ||||||||||||||| || ||  ||||||||||| | ||||| |||||||||||||| ||||||||    
T  23797458 cattttagattcattcaattaatgatgtatctggtctttattatagactacatacatcatttaatgaatgaatctaaa 23797381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 733 - 818
Target Start/End: Original strand, 28306328 - 28306413
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaat 818  Q
    |||||| ||||||||||||||||||||| ||||| ||||||||||| || |  |||||||||| ||| ||| |||||| |||||||    
T  28306328 ttataaccaaaaatctacattttagattcattcatttaatgatgcacataatttttattatagaccatatacatcattaaatgaat 28306413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 952 - 1031
Target Start/End: Original strand, 34828134 - 34828213
Alignment:
Q  952 gcaaaaacactgaa-gaggaaatgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatggggtgt 1031  Q
    ||||||||| |||| || || |||||||| | ||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  34828134 gcaaaaacattgaaagaagagatgaaaagtgatgatgatatgatgtaaaattact-aaaatacccctaacatatggggtgt 34828213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 748 - 827
Target Start/End: Original strand, 9555288 - 9555367
Alignment:
Q  748 tacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||||| ||||||||||||||||||| ||||   |||||| |||  ||||||| |||||||||||||| ||||||||    
T  9555288 tacattttaaatttattcaattaatgatgtatatagtctttatcataaaccacatacatcatttaatgaatgaatctaaa 9555367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 952 - 1033
Target Start/End: Complemental strand, 5811285 - 5811204
Alignment:
Q  952 gcaaaaacactgaa-gaggaaatgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatggggtgtac 1033  Q
    ||||||||| |||| || || |||||||||||||| ||| |||||| |||||||| ||||||||||||||||||| |||||||    
T  5811285 gcaaaaacattgaaagaagagatgaaaaggggtgaggatgtgatgtgaaattact-aaaatacccctaacacatgaggtgtac 5811204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 741 - 827
Target Start/End: Complemental strand, 11002435 - 11002349
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||||||||||||||||| ||||| ||||||||||| |||  |||| |||||| ||||||| |||||| ||| ||| || |||||    
T  11002435 aaaaatctacattttagattcattcatttaatgatgcacatggtcttttttatagaccacatacatcattaaataaatgaacctaaa 11002349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 733 - 827
Target Start/End: Complemental strand, 26477288 - 26477194
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||||||||||| || |||| ||||||||| ||||||||||| |||||| ||||| ||||  ||| ||| | |||||||| ||| ||||||||    
T  26477288 ttataaacaaaaatttatatttaagatttatttaattaatgatgtatatgatctttaatataaaccatatacaccatttaataaataaatctaaa 26477194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 733 - 827
Target Start/End: Complemental strand, 26553728 - 26553634
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||||||||||| || |||| ||||||||| ||||||||||| |||||| ||||| ||||  ||| ||| | |||||||| ||| ||||||||    
T  26553728 ttataaacaaaaatttatatttaagatttatttaattaatgatgtatatgatctttaatataaaccatatacaccatttaataaataaatctaaa 26553634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 733 - 795
Target Start/End: Original strand, 31813424 - 31813486
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattatag 795  Q
    |||||||||||||| ||||||||||||| ||||||||||||||| |||||  ||| |||||||    
T  31813424 ttataaacaaaaatttacattttagattcattcaattaatgatgtatatggtcttcattatag 31813486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 741 - 827
Target Start/End: Complemental strand, 34275310 - 34275224
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||| |||||||||||||| ||||| ||||||||||| ||   ||||||||||| ||||||| |||||| ||||||| || |||||    
T  34275310 aaaaaactacattttagattcattcatttaatgatgcacatagtctttattatagaccacatacatcattaaatgaatgaacctaaa 34275224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 952 - 1028
Target Start/End: Complemental strand, 28307617 - 28307541
Alignment:
Q  952 gcaaaaacactgaa-gaggaaatgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatgggg 1028  Q
    ||||||||| |||| || || ||||||| |||||||||||||||||||||||||| ||||||||| ||||| ||||||    
T  28307617 gcaaaaacattgaaagaagagatgaaaaagggtgatgatatgatgtaaaattact-aaaatacccttaacatatgggg 28307541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 952 - 1032
Target Start/End: Original strand, 30887769 - 30887849
Alignment:
Q  952 gcaaaaacactgaa-gaggaaatgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatggggtgta 1032  Q
    ||||||||| |||| || || ||||||| ||||||||||||||||||||||||||  ||||||| |||| ||||||||||||    
T  30887769 gcaaaaacattgaatgaagagatgaaaaagggtgatgatatgatgtaaaattact-taaatacctctaatacatggggtgta 30887849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 981 - 1033
Target Start/End: Complemental strand, 36346657 - 36346605
Alignment:
Q  981 ggtgatgatatgatgtaaaattactaaaaatacccctaacacatg-gggtgtac 1033  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  36346657 ggtgatgatatgatgtaaaattact-aaaatacccctaacacatgagggtgtac 36346605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 734 - 811
Target Start/End: Complemental strand, 46495494 - 46495417
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcattt 811  Q
    |||||| |||||| ||||||||| ||||||| ||||||||||| |||| | ||||||||||| | ||||| |||||||    
T  46495494 tataaataaaaatatacattttaaatttatttaattaatgatgtatattatctttattatagactacatacatcattt 46495417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 734 - 818
Target Start/End: Original strand, 10414953 - 10415037
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaat 818  Q
    ||||| |||||| ||||||||||| || ||| | ||||||||||| |||  ||||||||||| ||||||| |||||| |||||||    
T  10414953 tataagcaaaaaactacattttaggttcattgatttaatgatgcacatggtctttattatagaccacatacatcattaaatgaat 10415037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 741 - 813
Target Start/End: Complemental strand, 24280940 - 24280868
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaa 813  Q
    |||||||||||||||| ||| ||||||||||||||| |||| |  |||||||||| ||||||| || ||||||    
T  24280940 aaaaatctacattttaaattcattcaattaatgatgtatataatatttattatagaccacatacattatttaa 24280868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 972 - 1028
Target Start/End: Complemental strand, 26972304 - 26972249
Alignment:
Q  972 atgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatgggg 1028  Q
    ||||||| ||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  26972304 atgaaaaagggtgatgatatgatgtaaaattact-caaatacccctaatacatgggg 26972249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 952 - 1031
Target Start/End: Original strand, 31148359 - 31148438
Alignment:
Q  952 gcaaaaacactgaa-gaggaaatgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatggggtgt 1031  Q
    ||||||||| |||| || || ||||||| |||||||||||||||||||||||||| ||||||  ||||||| |||||||||    
T  31148359 gcaaaaacattgaaagaagagatgaaaatgggtgatgatatgatgtaaaattact-aaaataagcctaacatatggggtgt 31148438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 740 - 827
Target Start/End: Complemental strand, 26385745 - 26385658
Alignment:
Q  740 caaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||| ||||||| ||||| ||| ||||||||||| || ||  ||||||||||| ||||||| || ||||| ||||| ||||||||    
T  26385745 caaaaatttacatttaagattcatttaattaatgatgtatgtggtctttattatagaccacatacataatttattgaatgaatctaaa 26385658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 972 - 1027
Target Start/End: Original strand, 34108516 - 34108570
Alignment:
Q  972 atgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatggg 1027  Q
    ||||||| ||||||||||||||||||||||||||  |||||||||||| |||||||    
T  34108516 atgaaaaagggtgatgatatgatgtaaaattact-caaatacccctaatacatggg 34108570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 749 - 827
Target Start/End: Original strand, 3882580 - 3882658
Alignment:
Q  749 acattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||||||||| |||||||||||| || || | | ||| ||||||| ||||||| || ||||||||||| ||||||||    
T  3882580 acattttagattcattcaattaatggtgtatttaatcttgattatagaccacatatataatttaatgaatgaatctaaa 3882658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 733 - 834
Target Start/End: Complemental strand, 2943339 - 2943238
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    |||||| ||||||  || |||||| ||| ||||||||||| ||| || |   ||||||| ||| ||||||| |||||||||||||| |||||||| ||||    
T  2943339 ttataagcaaaaaattatattttacattcattcaattaataatgtatgtactctttattgtagaccacatacatcatttaatgaatgaatctaaaatgtt 2943240  T
Q  833 ga 834  Q
    ||    
T  2943239 ga 2943238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 734 - 827
Target Start/End: Complemental strand, 4406205 - 4406112
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||| |||||| ||| ||||||  || ||||| ||||||||||| |||  ||||||||||| ||||||| |||||| ||||||| || |||||    
T  4406205 tataagcaaaaaactatattttaagttcattcatttaatgatgcacatggtctttattatagaccacatacatcattaaatgaatgaacctaaa 4406112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 976 - 1033
Target Start/End: Original strand, 13108241 - 13108297
Alignment:
Q  976 aaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatggggtgtac 1033  Q
    |||||||||| ||| |||||| |||||||||||| ||||||||||||||| |||||||    
T  13108241 aaaggggtgaggatgtgatgtgaaattactaaaa-tacccctaacacatgaggtgtac 13108297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 734 - 827
Target Start/End: Original strand, 22106681 - 22106774
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||| ||||||||||  |||||||| |||||||||||||||| || ||  |||||||||| | |||||| |||||| | |||||  |||||||    
T  22106681 tataagcaaaaatctattttttagatatattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaatgtatctaaa 22106774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 734 - 783
Target Start/End: Original strand, 22281457 - 22281506
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatga 783  Q
    ||||||||||||||||  |||||||| |||||||||||||||| ||||||    
T  22281457 tataaacaaaaatctaatttttagatatattcaattaatgatgtatatga 22281506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 734 - 827
Target Start/End: Original strand, 25079221 - 25079314
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||| ||||||||||| ||||||||  ||||||||||||||| || ||| | |||||||| | |||||| |||||| | |||||  |||||||    
T  25079221 tataagcaaaaatctactttttagatacattcaattaatgatgtatgtgatccttattatatgtcacatacatcattaattgaatgtatctaaa 25079314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 733 - 818
Target Start/End: Complemental strand, 25814809 - 25814724
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaat 818  Q
    |||||||||||| ||||||||||||||||||||| ||||| ||| | ||   ||||||||||  | ||||| |||||| |||||||    
T  25814809 ttataaacaaaactctacattttagatttattcatttaataatgtacatagtctttattataaactacatacatcattaaatgaat 25814724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 735 - 832
Target Start/End: Complemental strand, 28321688 - 28321592
Alignment:
Q  735 ataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    ||||| |||| ||||||||||||||||||||||||||||||  ||||   ||||||||| | ||| ||| || ||||| ||||| |||||||| ||||    
T  28321688 ataaataaaattctacattttagatttattcaattaatgatatatatagtctttattat-gaccatatacataatttattgaatgaatctaaaatgtt 28321592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 734 - 803
Target Start/End: Original strand, 29498797 - 29498866
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacata 803  Q
    ||||| |||||||| ||||||||||| |||||||||||||||| || ||  |||||||||| | ||||||    
T  29498797 tataagcaaaaatccacattttagatatattcaattaatgatgtatgtggtctttattatatgtcacata 29498866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 734 - 827
Target Start/End: Complemental strand, 40529670 - 40529577
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||| ||||||||||  |||||||| |||||||||||||||| || ||  |||||||||| | |||||| |||||| | |||||  |||||||    
T  40529670 tataagcaaaaatctattttttagatatattcaattaatgatgtatgtggtctttattatatgtcacatacatcattaattgaatgtatctaaa 40529577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 733 - 794
Target Start/End: Original strand, 43130246 - 43130307
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattata 794  Q
    ||||||| |||||||||| ||||||||| ||||||||||||||| |||| |  |||||||||    
T  43130246 ttataaataaaaatctacgttttagattcattcaattaatgatgtatataatttttattata 43130307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 733 - 818
Target Start/End: Original strand, 45985573 - 45985658
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaat 818  Q
    |||||| | |||||| | ||||||| |||||| ||||||||||| ||||||  ||||||||||| |||| | |||||||| |||||    
T  45985573 ttataagctaaaatcaatattttaggtttatttaattaatgatgtatatgatatttattataggtcacaaatatcatttattgaat 45985658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 733 - 818
Target Start/End: Original strand, 45989933 - 45990018
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaat 818  Q
    |||||| | |||||| | ||||||| |||||| ||||||||||| ||||||  ||||||||||| |||| | |||||||| |||||    
T  45989933 ttataagctaaaatcaatattttaggtttatttaattaatgatgtatatgatatttattataggtcacaaatatcatttattgaat 45990018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 733 - 834
Target Start/End: Original strand, 8282452 - 8282555
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatg--atgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattg 830  Q
    ||||||| |||||| | ||||||  ||| ||||||||||||  ||  |||||| ||||||||||| ||| |||||||||||| | |||| ||||||| ||    
T  8282452 ttataaataaaaatttgcattttgaattcattcaattaatggtatatatatgatctttattatagaccatataaatcatttattaaattgatctaaaatg 8282551  T
Q  831 ttga 834  Q
    ||||    
T  8282552 ttga 8282555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 751 - 827
Target Start/End: Original strand, 18113266 - 18113342
Alignment:
Q  751 attttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||||||| ||||| ||||||||||| |||  ||||||||||| ||||||| |||||| ||  ||| ||||||||    
T  18113266 attttagattaattcatttaatgatgcaaatggtctttattatagaccacatatatcattaaacaaatgaatctaaa 18113342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 759 - 827
Target Start/End: Complemental strand, 21096288 - 21096220
Alignment:
Q  759 tttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||||||||| ||||||  ||||||||||  |||||| || ||||||||||| ||||||||    
T  21096288 tttatttaattaatgatgtatatgatatttattatagatcacatatattatttaatgaataaatctaaa 21096220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 740 - 832
Target Start/End: Original strand, 26904801 - 26904893
Alignment:
Q  740 caaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    ||||||| || ||||||  || ||||||||||||||| ||| || ||||||||||| ||||||| |||||| ||| ||| |||| ||| ||||    
T  26904801 caaaaatttatattttactttcattcaattaatgatgtatacgatctttattatagaccacatacatcattaaataaatgaatccaaaatgtt 26904893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 762 - 834
Target Start/End: Original strand, 39136608 - 39136680
Alignment:
Q  762 attcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgttga 834  Q
    ||||||||||||||| |||| |  |||||||||| ||||||  |||||||||||||  |||||||| ||||||    
T  39136608 attcaattaatgatgtatataatatttattatagaccacattcatcatttaatgaacgaatctaaaatgttga 39136680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 733 - 812
Target Start/End: Original strand, 2456349 - 2456428
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcattta 812  Q
    |||||| ||||||||||| |||||| || ||| ||||||||||| || || || ||| ||||| ||||||| ||||||||    
T  2456349 ttataagcaaaaatctactttttaggttcattgaattaatgatgtatgtggacattaatatagaccacatatatcattta 2456428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 741 - 832
Target Start/End: Complemental strand, 5084549 - 5084458
Alignment:
Q  741 aaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgtt 832  Q
    ||||||| |||||||| ||| ||||||||||||||| |||| | |||||||||||   ||||| || || |||||||| ||| |||| ||||    
T  5084549 aaaaatcaacattttatattaattcaattaatgatgtatattatctttattatagaaaacatacatgatataatgaatgaatttaaaatgtt 5084458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 752 - 827
Target Start/End: Complemental strand, 27242522 - 27242447
Alignment:
Q  752 ttttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||||| ||||||| |||||||||| ||  ||||||||||| | ||||| |||||| | ||||| ||||||||    
T  27242522 ttttagattcattcaataaatgatgcatgtggtctttattatagacaacatacatcattcattgaatgaatctaaa 27242447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 740 - 818
Target Start/End: Complemental strand, 4089909 - 4089831
Alignment:
Q  740 caaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaat 818  Q
    ||||||| || |||||| ||| ||||||||||||||| |||||  ||||||||| |  || ||| ||||||||||||||    
T  4089909 caaaaatttatattttatattcattcaattaatgatgtatatggtctttattatggagcatatacatcatttaatgaat 4089831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 734 - 776
Target Start/End: Complemental strand, 25079333 - 25079291
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatg 776  Q
    ||||||||||||||||| ||||||||  |||||||||||||||    
T  25079333 tataaacaaaaatctactttttagatacattcaattaatgatg 25079291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 733 - 827
Target Start/End: Complemental strand, 27242673 - 27242579
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||||||||||||||  ||| | || ||||||| || || ||| ||||||||||  ||||||| |||||| ||||||| ||| ||||    
T  27242673 ttataagcaaaaatctacattttgaattcaatctattaatgttgtatgtgatctttattataaaccacatacatcattcaatgaataaatgtaaa 27242579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 768 - 818
Target Start/End: Original strand, 28949323 - 28949373
Alignment:
Q  768 ttaatgatgcatatgaactttattataggccacataaatcatttaatgaat 818  Q
    |||||||||||||||  ||||||||||| ||||||| |||||| |||||||    
T  28949323 ttaatgatgcatatggtctttattatagaccacatacatcattaaatgaat 28949373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 734 - 776
Target Start/End: Complemental strand, 41872177 - 41872135
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatg 776  Q
    ||||| ||||||||||||||||||||| ||||| |||||||||    
T  41872177 tataagcaaaaatctacattttagattcattcatttaatgatg 41872135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 733 - 818
Target Start/End: Complemental strand, 12274936 - 12274851
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaat 818  Q
    |||||| ||||||| ||| ||||||||| |||||||  || ||| || ||  || |||||||||||||||| |||||||| |||||    
T  12274936 ttataagcaaaaatgtactttttagattcattcaatatataatgtatgtggtctatattataggccacatacatcatttattgaat 12274851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 976 - 1025
Target Start/End: Original strand, 15020373 - 15020421
Alignment:
Q  976 aaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatg 1025  Q
    |||||||||| |||||||||| |||||||| |||||| ||||||||||||    
T  15020373 aaaggggtgaagatatgatgtgaaattact-aaaatatccctaacacatg 15020421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 785 - 834
Target Start/End: Original strand, 25245208 - 25245257
Alignment:
Q  785 ctttattataggccacataaatcatttaatgaattaatctaaattgttga 834  Q
    ||||||| ||| ||||||| |||||||||||||| |||||||| ||||||    
T  25245208 ctttattgtagaccacatacatcatttaatgaatgaatctaaaatgttga 25245257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 749 - 834
Target Start/End: Original strand, 31115638 - 31115723
Alignment:
Q  749 acattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgttga 834  Q
    |||||||||||| || || | ||||||| ||||   ||||||||||| ||||||| || ||||||||||| || ||||| ||||||    
T  31115638 acattttagattcatccattaaatgatgtatatattctttattatagaccacatacataatttaatgaatgaagctaaaatgttga 31115723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 734 - 831
Target Start/End: Complemental strand, 34703569 - 34703472
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgt 831  Q
    ||||| |||||||  || ||||||||  ||||||||||||||| |||||  |||||||||| | |||||  |||||| | |||||  |||||||||||    
T  34703569 tataagcaaaaattcactttttagatacattcaattaatgatgtatatggtctttattatatgtcacatgcatcattaattgaatgtatctaaattgt 34703472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 734 - 831
Target Start/End: Complemental strand, 40417032 - 40416935
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaattgt 831  Q
    ||||| |||||||  || ||||||||  ||||||||||||||| |||||  |||||||||| | |||||  |||||| | |||||  |||||||||||    
T  40417032 tataagcaaaaattcactttttagatacattcaattaatgatgtatatggtctttattatatgtcacatgcatcattaattgaatgtatctaaattgt 40416935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 47; Significance: 3e-17; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 733 - 827
Target Start/End: Original strand, 139309 - 139403
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||| ||||||||||  ||||| ||| ||||| ||||||||||| |||| ||||||||||| ||||||| |||||| ||||||| ||||||||    
T  139309 ttataagcaaaaatctattttttacattcattcatttaatgatgcacatgatctttattatagaccacatacatcattaaatgaatgaatctaaa 139403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 751 - 827
Target Start/End: Original strand, 24637 - 24713
Alignment:
Q  751 attttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||||||| ||||||||||| | | |||| | ||||||||||| ||||||| |||||||||||||| ||||||||    
T  24637 attttagattcattcaattaataacgtatattatctttattatagaccacatacatcatttaatgaatgaatctaaa 24713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 39; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 733 - 803
Target Start/End: Original strand, 2433 - 2503
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacata 803  Q
    |||||| ||||||| ||||| ||||||| ||||| ||||||||||| |||| ||||||||||| |||||||    
T  2433 ttataagcaaaaatttacatcttagattcattcatttaatgatgcacatgatctttattatagaccacata 2503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341; HSP #2
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 733 - 803
Target Start/End: Original strand, 10088 - 10158
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacata 803  Q
    |||||| ||||||| ||||| ||||||| ||||| ||||||||||| |||| ||||||||||| |||||||    
T  10088 ttataagcaaaaatttacatcttagattcattcatttaatgatgcacatgatctttattatagaccacata 10158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 733 - 827
Target Start/End: Complemental strand, 36981 - 36887
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||||||||||| |||||||||||| ||||| | ||||||| || ||| || | |||| | ||| ||| |||||||||||||| ||||||||    
T  36981 ttataaacaaaaatcaacattttagattcattcattaaatgatgtatttgatctatgttattgaccaaatacatcatttaatgaatgaatctaaa 36887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 742 - 795
Target Start/End: Complemental strand, 438276 - 438223
Alignment:
Q  742 aaaatctacattttagatttattcaattaatgatgcatatgaactttattatag 795  Q
    ||||||||||||||| ||||||||||||||||||| ||||  ||||||||||||    
T  438276 aaaatctacattttaaatttattcaattaatgatgtatatatactttattatag 438223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 733 - 827
Target Start/End: Complemental strand, 88981 - 88889
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||||||||||||||| |||||| ||| |||||||||||||||  ||||  |||||| ||||  || ||| |||||||||| ||| ||||||||    
T  88981 ttataaacaaaaatctatattttatattcattcaattaatgatg--tatgttctttatcatagatcatatacatcatttaataaataaatctaaa 88889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1476 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1476
Description:

Target: scaffold1476; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 753 - 827
Target Start/End: Original strand, 693 - 766
Alignment:
Q  753 tttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||||||||||||||||||||| ||||| | ||||||||||  | | || |||||||||||||| ||||||||    
T  693 tttagatttattcaattaatgatgtatatg-attttattatagatcgcgtacatcatttaatgaatgaatctaaa 766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 734 - 827
Target Start/End: Original strand, 6227 - 6320
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    ||||| ||||||  |||||||| |||| ||||| ||||||||||| |||  |||||||||||  |||||| |||||| ||||||| || |||||    
T  6227 tataagcaaaaaattacattttcgattcattcatttaatgatgcacatggtctttattatagatcacatacatcattaaatgaatgaacctaaa 6320  T

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Target: scaffold0047 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 734 - 827
Target Start/End: Complemental strand, 61288 - 61196
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacataaatcatttaatgaattaatctaaa 827  Q
    |||||||||||||| |||||||||||  ||||||||||||||| || ||  |||||||||| | |||||| |||||| | |||||  |||||||    
T  61288 tataaacaaaaatccacattttagatacattcaattaatgatgtatgtg-gctttattatatgtcacatacatcattaattgaatgtatctaaa 61196  T

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Target: scaffold0062 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 952 - 1033
Target Start/End: Original strand, 6787 - 6869
Alignment:
Q  952 gcaaaaacactgaa-gaggaaatgaaaaggggtgatgatatgatgtaaaattactaaaaatacccctaacacatg-gggtgtac 1033  Q
    ||||||||| |||| || || ||||||| ||||||||||||||||||||||||||  ||||| |||||| ||||| ||||||||    
T  6787 gcaaaaacattgaaagaagagatgaaaaagggtgatgatatgatgtaaaattact-taaatatccctaatacatgagggtgtac 6869  T

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Target: scaffold0181 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 733 - 802
Target Start/End: Complemental strand, 10694 - 10625
Alignment:
Q  733 ttataaacaaaaatctacattttagatttattcaattaatgatgcatatgaactttattataggccacat 802  Q
    ||||||||| || |||| || ||||||||||||||||||||||  ||||||   ||||||||| ||||||    
T  10694 ttataaacataactctatatgttagatttattcaattaatgatatatatgattcttattatagaccacat 10625  T

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Target: scaffold0043 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 996 - 1033
Target Start/End: Complemental strand, 87239 - 87203
Alignment:
Q  996 taaaattactaaaaatacccctaacacatggggtgtac 1033  Q
    |||||||||||||| |||||||||||||||||||||||    
T  87239 taaaattactaaaa-tacccctaacacatggggtgtac 87203  T

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Target: scaffold0039 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 734 - 783
Target Start/End: Original strand, 54402 - 54451
Alignment:
Q  734 tataaacaaaaatctacattttagatttattcaattaatgatgcatatga 783  Q
    ||||| ||||||||||| ||||||||  ||||||||||||||| ||||||    
T  54402 tataagcaaaaatctactttttagatacattcaattaatgatgtatatga 54451  T

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