View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4745-Insertion-20 (Length: 314)
Name: NF4745-Insertion-20
Description: NF4745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4745-Insertion-20 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 6 - 314
Target Start/End: Original strand, 2305733 - 2306041
Alignment:
| Q |
6 |
catatgaagctaggacatagctgcataatattaagtaaatataatagttagttgagtatcaacaagattaattggttgtttcaaataaaatcatcaaaga |
105 |
Q |
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| T |
2305733 |
catatgaagctaggacataactgcataatattaagtaaatataatagttagttaagtatcaacaagattaattggttgtttcaaataaaatcatcaaaga |
2305832 |
T |
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| Q |
106 |
ttatgccaaaatttaactcattatataacacttaatatggagaggaaagaaagaaaatcctttgctatattttataatacatcaatgttacaaccaataa |
205 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
2305833 |
ttatgtcaaaatttaactcattatataacacttaatatggagaggaaagaaagaaaatcctttgctatattttataatacatcaatgttacacccaataa |
2305932 |
T |
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| Q |
206 |
tttataataaccatgaacttgaagataaaatatttttacacatatgtcataattcaaattttactataaaacagtaatattattttttgaagtaactata |
305 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2305933 |
tttataataaccatgaacttgaagataaaatatttttacacatatgtcataattcaaattttactataaaacagtaatattattttttgaagtaactata |
2306032 |
T |
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| Q |
306 |
taaatgtaa |
314 |
Q |
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||||||||| |
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| T |
2306033 |
taaatgtaa |
2306041 |
T |
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