View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4745-Insertion-6 (Length: 813)

Name: NF4745-Insertion-6
Description: NF4745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4745-Insertion-6
NF4745-Insertion-6
[»] chr4 (17 HSPs)
chr4 (35-813)||(30522220-30522998)
chr4 (61-176)||(30982819-30982935)
chr4 (59-113)||(8423723-8423777)
chr4 (21-106)||(22440612-22440696)
chr4 (42-106)||(13783264-13783328)
chr4 (43-106)||(36635308-36635371)
chr4 (54-113)||(40613445-40613504)
chr4 (42-106)||(903905-903969)
chr4 (24-103)||(11651149-11651228)
chr4 (59-110)||(23861439-23861490)
chr4 (45-111)||(35723391-35723458)
chr4 (32-98)||(7012039-7012105)
chr4 (39-127)||(22234880-22234970)
chr4 (45-106)||(15029751-15029812)
chr4 (60-113)||(16189710-16189763)
chr4 (17-82)||(20633443-20633508)
chr4 (59-100)||(38148743-38148784)
[»] chr1 (37 HSPs)
chr1 (42-113)||(2896126-2896197)
chr1 (18-108)||(15641040-15641130)
chr1 (45-105)||(36878447-36878507)
chr1 (42-105)||(398778-398841)
chr1 (45-100)||(17831549-17831604)
chr1 (17-105)||(1486722-1486810)
chr1 (42-106)||(6427333-6427397)
chr1 (45-113)||(13997869-13997937)
chr1 (42-113)||(6415006-6415077)
chr1 (30-113)||(9709791-9709874)
chr1 (17-100)||(41877488-41877571)
chr1 (45-111)||(7918218-7918284)
chr1 (45-106)||(5898278-5898339)
chr1 (54-166)||(9828039-9828152)
chr1 (32-105)||(34298409-34298482)
chr1 (63-127)||(44482234-44482299)
chr1 (22-158)||(47989461-47989597)
chr1 (59-111)||(17754311-17754363)
chr1 (57-113)||(34371712-34371767)
chr1 (46-113)||(10572594-10572661)
chr1 (47-106)||(19324550-19324609)
chr1 (59-106)||(25098567-25098614)
chr1 (42-113)||(38503303-38503374)
chr1 (59-106)||(40181871-40181918)
chr1 (67-113)||(1864885-1864931)
chr1 (42-100)||(5376518-5376576)
chr1 (54-100)||(12443478-12443524)
chr1 (59-113)||(20157355-20157409)
chr1 (54-127)||(25361881-25361955)
chr1 (39-113)||(39953151-39953225)
chr1 (42-100)||(42359467-42359525)
chr1 (39-100)||(1815237-1815298)
chr1 (45-113)||(9690279-9690345)
chr1 (45-98)||(10474997-10475050)
chr1 (17-114)||(10577739-10577836)
chr1 (59-100)||(26238130-26238171)
chr1 (57-113)||(29229459-29229516)
[»] chr2 (18 HSPs)
chr2 (637-797)||(38899309-38899469)
chr2 (42-106)||(21616745-21616809)
chr2 (34-113)||(18276496-18276575)
chr2 (42-113)||(23718009-23718080)
chr2 (42-113)||(24105681-24105752)
chr2 (32-105)||(27286305-27286378)
chr2 (57-113)||(44860318-44860374)
chr2 (46-100)||(21782836-21782890)
chr2 (44-113)||(20242732-20242801)
chr2 (45-106)||(28677895-28677956)
chr2 (44-105)||(31018575-31018636)
chr2 (59-112)||(37411250-37411303)
chr2 (61-105)||(25846743-25846787)
chr2 (21-100)||(12940953-12941031)
chr2 (42-100)||(30404868-30404926)
chr2 (45-111)||(31808063-31808129)
chr2 (42-100)||(39323247-39323305)
chr2 (32-113)||(34784987-34785068)
[»] chr3 (16 HSPs)
chr3 (39-109)||(29112289-29112359)
chr3 (43-104)||(2620067-2620128)
chr3 (54-118)||(34307780-34307844)
chr3 (42-105)||(8383240-8383303)
chr3 (38-113)||(18426928-18427003)
chr3 (59-113)||(7928450-7928504)
chr3 (59-113)||(10690267-10690321)
chr3 (34-100)||(26508085-26508151)
chr3 (42-111)||(49505161-49505230)
chr3 (60-127)||(8039825-8039893)
chr3 (32-100)||(14618754-14618822)
chr3 (46-100)||(4987309-4987363)
chr3 (59-97)||(13620785-13620823)
chr3 (42-100)||(21720747-21720805)
chr3 (42-100)||(55401058-55401116)
chr3 (59-139)||(16192728-16192809)
[»] chr6 (28 HSPs)
chr6 (32-113)||(9658852-9658933)
chr6 (42-175)||(5000568-5000702)
chr6 (43-113)||(7265598-7265668)
chr6 (42-113)||(9027161-9027232)
chr6 (48-111)||(19040341-19040404)
chr6 (54-140)||(26562684-26562771)
chr6 (54-148)||(18367831-18367926)
chr6 (59-113)||(9025499-9025553)
chr6 (67-113)||(11784221-11784267)
chr6 (42-112)||(13851719-13851789)
chr6 (57-110)||(5462684-5462737)
chr6 (44-113)||(5732515-5732584)
chr6 (60-113)||(30866149-30866202)
chr6 (67-166)||(5970059-5970159)
chr6 (44-100)||(16766682-16766738)
chr6 (57-105)||(32511679-32511727)
chr6 (54-113)||(9629378-9629437)
chr6 (42-105)||(17341677-17341740)
chr6 (42-113)||(20371115-20371186)
chr6 (47-94)||(32320693-32320740)
chr6 (59-113)||(7377979-7378033)
chr6 (44-106)||(7996390-7996452)
chr6 (44-106)||(8022349-8022411)
chr6 (42-100)||(12696307-12696365)
chr6 (42-100)||(17841607-17841665)
chr6 (122-180)||(24831861-24831919)
chr6 (42-127)||(34073337-34073423)
chr6 (39-88)||(19147433-19147482)
[»] chr7 (29 HSPs)
chr7 (40-100)||(23191877-23191937)
chr7 (44-157)||(32308105-32308219)
chr7 (23-113)||(19206014-19206104)
chr7 (47-113)||(22602715-22602781)
chr7 (45-113)||(5835233-5835301)
chr7 (23-95)||(11722121-11722193)
chr7 (42-105)||(1401008-1401071)
chr7 (46-113)||(20549778-20549845)
chr7 (39-113)||(9482914-9482988)
chr7 (45-111)||(22868028-22868094)
chr7 (45-134)||(26329365-26329455)
chr7 (42-100)||(27945024-27945082)
chr7 (54-100)||(29787387-29787433)
chr7 (17-113)||(18213038-18213135)
chr7 (32-113)||(26733277-26733358)
chr7 (45-113)||(3520347-3520415)
chr7 (34-118)||(43249968-43250052)
chr7 (42-113)||(1433437-1433508)
chr7 (45-112)||(6630918-6630985)
chr7 (25-100)||(13770657-13770732)
chr7 (44-158)||(24339627-24339742)
chr7 (45-88)||(25791639-25791682)
chr7 (42-100)||(24105661-24105719)
chr7 (54-100)||(30731032-30731078)
chr7 (59-113)||(32287468-32287522)
chr7 (45-111)||(42720897-42720963)
chr7 (48-113)||(2425738-2425803)
chr7 (42-99)||(8842354-8842411)
chr7 (62-111)||(17851434-17851483)
[»] scaffold0004 (1 HSPs)
scaffold0004 (39-100)||(92787-92848)
[»] chr5 (27 HSPs)
chr5 (39-100)||(39698521-39698582)
chr5 (60-111)||(12264836-12264887)
chr5 (30-100)||(15410466-15410536)
chr5 (44-113)||(3966488-3966557)
chr5 (42-97)||(19579684-19579739)
chr5 (22-100)||(6326315-6326393)
chr5 (42-127)||(22423802-22423888)
chr5 (45-111)||(27144449-27144515)
chr5 (57-106)||(6471901-6471950)
chr5 (60-113)||(30502393-30502446)
chr5 (60-113)||(30542736-30542789)
chr5 (59-112)||(41091263-41091316)
chr5 (62-110)||(17593730-17593778)
chr5 (54-105)||(28588687-28588738)
chr5 (45-134)||(6035469-6035558)
chr5 (34-100)||(6247597-6247663)
chr5 (42-104)||(9449452-9449514)
chr5 (42-100)||(14674252-14674310)
chr5 (42-100)||(21191074-21191132)
chr5 (46-100)||(21576763-21576817)
chr5 (54-100)||(27932230-27932276)
chr5 (43-113)||(30098310-30098380)
chr5 (42-99)||(6770526-6770583)
chr5 (34-111)||(12927629-12927706)
chr5 (44-113)||(17123033-17123102)
chr5 (46-158)||(18592060-18592173)
chr5 (60-113)||(36838544-36838597)
[»] scaffold0168 (1 HSPs)
scaffold0168 (17-134)||(21001-21119)
[»] scaffold0036 (1 HSPs)
scaffold0036 (66-159)||(9705-9799)
[»] chr8 (19 HSPs)
chr8 (42-112)||(34897068-34897138)
chr8 (52-158)||(11927045-11927152)
chr8 (66-113)||(14134706-14134753)
chr8 (51-113)||(7658455-7658517)
chr8 (45-111)||(24362209-24362275)
chr8 (42-111)||(31109525-31109594)
chr8 (45-106)||(39954291-39954352)
chr8 (45-113)||(4786343-4786411)
chr8 (46-106)||(11803246-11803306)
chr8 (45-113)||(13844601-13844669)
chr8 (58-98)||(18067954-18067994)
chr8 (32-100)||(37283828-37283896)
chr8 (59-106)||(4611534-4611581)
chr8 (45-100)||(24669419-24669474)
chr8 (18-105)||(25192360-25192447)
chr8 (54-113)||(31236582-31236641)
chr8 (24-103)||(41838138-41838217)
chr8 (39-105)||(14692440-14692505)
chr8 (39-105)||(15816142-15816208)
[»] scaffold0123 (1 HSPs)
scaffold0123 (56-113)||(44530-44587)
[»] scaffold0018 (1 HSPs)
scaffold0018 (32-100)||(192267-192335)
[»] scaffold0652 (1 HSPs)
scaffold0652 (42-100)||(480-538)
[»] scaffold0103 (1 HSPs)
scaffold0103 (42-100)||(51794-51852)
[»] scaffold1528 (1 HSPs)
scaffold1528 (59-111)||(1035-1087)
[»] scaffold0027 (1 HSPs)
scaffold0027 (17-113)||(46640-46736)
[»] scaffold0306 (1 HSPs)
scaffold0306 (42-97)||(13383-13438)
[»] scaffold0152 (1 HSPs)
scaffold0152 (42-97)||(21889-21944)
[»] scaffold0223 (1 HSPs)
scaffold0223 (42-100)||(20155-20213)
[»] scaffold0020 (1 HSPs)
scaffold0020 (59-113)||(135317-135371)
[»] scaffold0022 (1 HSPs)
scaffold0022 (67-112)||(90851-90896)


Alignment Details
Target: chr4 (Bit Score: 618; Significance: 0; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 618; E-Value: 0
Query Start/End: Original strand, 35 - 813
Target Start/End: Complemental strand, 30522998 - 30522220
Alignment:
Q  35 acaagatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgggtcgggtcggtgtcaaacacg 134  Q
    |||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||| ||||||||||    
T  30522998 acaagacacggatactgatacgctcacaccgctaattatttgagaaaatcacataattcagtgtaactatatatgttgggtcggatcggcgtcaaacacg 30522899  T
Q  135 gcacatatctgacatcgagacacgtccaatccaaaaagtgtctgtgatagaaacaagtcattcgaaataaattgagatcaaattcttaacttaaacaatt 234  Q
     ||||||||||||| ||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||| |||||||||||    
T  30522898 acacatatctgacaccgagacacgtctaatccaaagagtgtctgtcatagaaacaagtcattcgaaataatctgagatcaaattcttagcttaaacaatt 30522799  T
Q  235 ttcttcttcttcagattttatttatctttcggtcgaactccatattatcataatttttccctaagatgcattcaaattagagatggaaatttgttagatt 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  30522798 ttcttcttcttcagattttatttatctttcggtcgaactccatattatcataatttttccctaagatgccttcaaattagagatggaaatttattagatt 30522699  T
Q  335 gcacattcaactctaaaatgacatgtggttttccttgagttaatttgaatctagacaaagtaagaaatgaacatacccttggtgacaacaatttgctttt 434  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  30522698 gcacattcaactctaaaatgacatgtggttttccttgagttaatttgaatcaagacaaagtaagaaatgaacatacccttggtgacaacaatttgctttt 30522599  T
Q  435 ccctaaacctatctgttttcaattggctactactactatttctaactatgttaagctactgagtgagagagaagattgtaatatttttatggaggaggga 534  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30522598 ccctaaacctatttgttttcaattggctactactactatttctaactatgttaagctactgagtgagagagaagattgtaatatttttatggaggaggga 30522499  T
Q  535 ccctaaggagtttgaacaggaatctcacaaggccttgaaagttgaaacctttnnnnnnnnnnnnnnnnnnnnnnggtgagaatattctaaggccaccaca 634  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||                      ||||||||||||||||||||||||||    
T  30522498 ccctaaggagtttgaacaggaatctcacaaggccttgaaagttgaaacctttgagagaggagagagttggagagggtgagaatattctaaggccaccaca 30522399  T
Q  635 gttcaacaactaaattccaaagattttatattaaacaatgttagaaagggaaaacatcattagattatgattatggatgagaaattttttgcaggaaaag 734  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  30522398 gttcaacaactaaattccaaagattttatattaaacaatgttagaaa-ggaaaacatcattagattatgattatggatgagaaaatttttgcaggaaaag 30522300  T
Q  735 tcagcccacaacgagacgactgctcaaacttccaaaaa-tcactgcctttgtcagctggctgtcccttttcctatagtat 813  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  30522299 tcagcccacaacgagacgactgctcaaacttccaaaaattcactgcctttgtcagctggctgtcccttttcctatagtat 30522220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 61 - 176
Target Start/End: Complemental strand, 30982935 - 30982819
Alignment:
Q  61 caccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg-gtcgggtcggtgtcaaacacggcacatatctgacatcgagacacgt 159  Q
    |||||||||| |||||||||||||||||  |||||||||| ||||  |||||| |||| |||||||||| ||||| ||| | || |||| || ||||||     
T  30982935 caccgctaatgatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgtgtcggtgtcagacacgacacgtgtccgacaccgggacacgc 30982836  T
Q  160 ccaatccaaaaagtgtc 176  Q
    | |||||||| ||||||    
T  30982835 ctaatccaaagagtgtc 30982819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 8423777 - 8423723
Alignment:
Q  59 gacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    |||||||||||| ||||||||||||||||| ||||||||||| |||| |||||||    
T  8423777 gacaccgctaataatttgagaaaatcacataattcagtgtaattataaatgtcgg 8423723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 22440696 - 22440612
Alignment:
Q  21 aacacggatatcagacaagatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatat 106  Q
    |||||||||| |||||| || | ||||||||||||   ||||||| |||| ||||||||||||||||| ||||||||||| |||||    
T  22440696 aacacggata-cagacacgacatggacactgatacatcgacaccgttaataatttgagaaaatcacataattcagtgtaattatat 22440612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 106
Target Start/End: Original strand, 13783264 - 13783328
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatat 106  Q
    ||||||||||| || | |||||||||||||||||||||| ||||||  ||||||||||| |||||    
T  13783264 acggacactgacacaccgacaccgctaattatttgagaagatcacaaaattcagtgtaattatat 13783328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 36635308 - 36635371
Alignment:
Q  43 cggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatat 106  Q
    |||||||||| ||||  ||||| ||||| ||||||||||||||||| ||||||||||| |||||    
T  36635308 cggacactgacacgccaacaccactaataatttgagaaaatcacataattcagtgtaattatat 36635371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 113
Target Start/End: Original strand, 40613445 - 40613504
Alignment:
Q  54 acgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    |||| ||||||||||||  |||||||||||||||| ||||||||||| ||||| ||||||    
T  40613445 acgccgacaccgctaatattttgagaaaatcacataattcagtgtaattatatgtgtcgg 40613504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 106
Target Start/End: Original strand, 903905 - 903969
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatat 106  Q
    ||||||||||| || | | ||||| |||| ||||||||||||||||| ||||||||||| |||||    
T  903905 acggacactgacacaccggcaccgttaataatttgagaaaatcacataattcagtgtaattatat 903969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 103
Target Start/End: Complemental strand, 11651228 - 11651149
Alignment:
Q  24 acggatatcagacaagatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaacta 103  Q
    ||||| || ||||| |||||||||||||| |||  ||||| |||||| |||| | |||||||||| |||||||| |||||    
T  11651228 acggacataagacacgatacggacactgacacgtcgacacagctaataatttaaaaaaatcacataattcagtgcaacta 11651149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 110
Target Start/End: Complemental strand, 23861490 - 23861439
Alignment:
Q  59 gacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgt 110  Q
    |||||||||||| | |||| |||||||||||||||| ||||| |||||||||    
T  23861490 gacaccgctaataaattgataaaatcacatgattcaatgtaattatatatgt 23861439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 35723458 - 35723391
Alignment:
Q  45 gacactgatacgctgacaccgctaattatttgagaaaat-cacatgattcagtgtaactatatatgtc 111  Q
    |||||||| |||| |||||||||||| |||||||||||| ||||| ||||| ||||| ||||| ||||    
T  35723458 gacactgacacgccgacaccgctaataatttgagaaaatacacataattcaatgtaattatatgtgtc 35723391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 98
Target Start/End: Original strand, 7012039 - 7012105
Alignment:
Q  32 cagacaagatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgt 98  Q
    |||||| || |||||||| || |||| ||||||| |||| |||||||||||| |||| |||||||||    
T  7012039 cagacaggacacggacaccgacacgccgacaccgataataatttgagaaaatgacataattcagtgt 7012105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 127
Target Start/End: Complemental strand, 22234970 - 22234880
Alignment:
Q  39 gatacggacactgatacgctgacaccgctaattatttg-agaaaatcacatgattcagtgtaactatatatgtcgg-gtcgggtcggtgtc 127  Q
    ||||||||||| || |||| |||||||||||  ||||| | |||||||||| ||||||||||| | ||| |||||| |||| |||||||||    
T  22234970 gatacggacacggacacgccgacaccgctaaaaatttgaaaaaaatcacataattcagtgtaattctatgtgtcggtgtcgtgtcggtgtc 22234880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 106
Target Start/End: Original strand, 15029751 - 15029812
Alignment:
Q  45 gacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatat 106  Q
    |||||||| |||| ||||| |||||| |||||| || ||||||| ||||||||||| |||||    
T  15029751 gacactgacacgcagacactgctaataatttgaaaatatcacataattcagtgtaattatat 15029812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 16189710 - 16189763
Alignment:
Q  60 acaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    ||||||||||  ||||||||||||||||| ||||||||||| ||| | ||||||    
T  16189710 acaccgctaaaaatttgagaaaatcacataattcagtgtaattatgtgtgtcgg 16189763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 20633443 - 20633508
Alignment:
Q  17 tacgaacacggatatcagacaagatacggacactgatacgctgacaccgctaattatttgagaaaa 82  Q
    |||| ||||||| | |||||| |||||||||||||| |||  |||||||||||| |||||| ||||    
T  20633443 tacggacacggacaccagacacgatacggacactgacacgtcgacaccgctaataatttgaaaaaa 20633508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 100
Target Start/End: Complemental strand, 38148784 - 38148743
Alignment:
Q  59 gacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    ||||||||||||  |||||||||||||||| |||||||||||    
T  38148784 gacaccgctaatagtttgagaaaatcacataattcagtgtaa 38148743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 2e-20; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 42 - 113
Target Start/End: Complemental strand, 2896197 - 2896126
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    ||||||||||| |||| |||||||||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  2896197 acggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtagctatatatgtcgg 2896126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 18 - 108
Target Start/End: Complemental strand, 15641130 - 15641040
Alignment:
Q  18 acgaacacggatatcagacaagatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatat 108  Q
    ||||||||||| ||| |||| || ||||||||||| | || ||||| |||||| |||| ||||||||||||||||||||||||||||||||    
T  15641130 acgaacacggacatcggacatgacacggacactgacatgccgacactgctaataatttaagaaaatcacatgattcagtgtaactatatat 15641040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 36878447 - 36878507
Alignment:
Q  45 gacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactata 105  Q
    |||||||| |||| |||||||||||| ||||||||||||||||| ||||||||||| ||||    
T  36878447 gacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattata 36878507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 105
Target Start/End: Complemental strand, 398841 - 398778
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactata 105  Q
    ||||||||||| |||| |||||||||||| |||||| |||||||||| ||||||||||| ||||    
T  398841 acggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattata 398778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 17831604 - 17831549
Alignment:
Q  45 gacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    |||||||| |||| |||||||||||| ||||||||||||||||| |||||||||||    
T  17831604 gacactgacacgccgacaccgctaataatttgagaaaatcacattattcagtgtaa 17831549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 105
Target Start/End: Complemental strand, 1486810 - 1486722
Alignment:
Q  17 tacgaacacggatatcagacaagatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactata 105  Q
    |||| ||||||||| | || | || ||||| ||||| |||||||||| |||||| |||||| |||||||||| ||||||||||| ||||    
T  1486810 tacggacacggataccggatacgacacggatactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattata 1486722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 106
Target Start/End: Original strand, 6427333 - 6427397
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatat 106  Q
    ||||||||||| ||||  ||||||||||| ||||||||||||||||| ||||| ||||| |||||    
T  6427333 acggacactgacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaattatat 6427397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 113
Target Start/End: Original strand, 13997869 - 13997937
Alignment:
Q  45 gacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    |||||||| |||| ||||||| ||||||||| | |||||||||| ||||||||||| ||||| ||||||    
T  13997869 gacactgacacgccgacaccgttaattatttaaaaaaatcacataattcagtgtaattatatgtgtcgg 13997937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 113
Target Start/End: Complemental strand, 6415077 - 6415006
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    ||||||||||| |||| |||| ||||||||||||||||||||||||| || |||| ||| || || ||||||    
T  6415077 acggacactgacacgccgacatcgctaattatttgagaaaatcacataatacagtttaattagatgtgtcgg 6415006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 9709791 - 9709874
Alignment:
Q  30 atcagacaagatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    |||||||| || ||||||||||| | ||  ||||||||||| ||||||||||||||||| ||||  ||||| ||||| ||||||    
T  9709791 atcagacacgacacggacactgacatgcctacaccgctaataatttgagaaaatcacataattcgttgtaattatatgtgtcgg 9709874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 41877571 - 41877488
Alignment:
Q  17 tacgaacacggatatcagacaagatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    |||| ||| ||||| |||||| || || ||||||| ||||| |||||||||||| |||||||||||| |||| ||| |||||||    
T  41877571 tacggacatggataccagacacgacacagacactggtacgccgacaccgctaataatttgagaaaattacataatttagtgtaa 41877488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 7918284 - 7918218
Alignment:
Q  45 gacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtc 111  Q
    |||| ||| ||||||||| | ||||| ||||||||||||||||| ||||||||||| ||||| ||||    
T  7918284 gacaatgacacgctgacatcactaataatttgagaaaatcacataattcagtgtaattatatgtgtc 7918218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 106
Target Start/End: Complemental strand, 5898339 - 5898278
Alignment:
Q  45 gacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatat 106  Q
    |||||||| |||| |||||||||||| || ||| |||||||||| ||||||||||| |||||    
T  5898339 gacactgagacgccgacaccgctaataatctgaaaaaatcacataattcagtgtaattatat 5898278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 166
Target Start/End: Original strand, 9828039 - 9828152
Alignment:
Q  54 acgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg-gtcgggtcggtgtcaaacacggcacatatctgacatcga 152  Q
    |||| |||||| ||||| |||||| |||||||||| ||||||||||| | ||| |||||| |||| ||| |||||| ||||| ||| | || |||| ||     
T  9828039 acgccgacaccactaataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtcgtgtccgtgtcagacacgacacgtgtccgacaccgg 9828138  T
Q  153 gacacgtccaatcc 166  Q
    |||||||| |||||    
T  9828139 gacacgtctaatcc 9828152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 34298409 - 34298482
Alignment:
Q  32 cagacaagatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactata 105  Q
    |||||| || ||||| ||||| || | |||||| ||||| ||||||||||||||||| ||||||||||| ||||    
T  34298409 cagacacgacacggaaactgacacaccgacaccactaataatttgagaaaatcacataattcagtgtaattata 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 44482234 - 44482299
Alignment:
Q  63 ccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg-gtcgggtcggtgtc 127  Q
    ||||| || ||||||||||||||||| ||||||||||| ||||| |||||| |||| |||||||||    
T  44482234 ccgcttataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtc 44482299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 158
Target Start/End: Original strand, 47989461 - 47989597
Alignment:
Q  22 acacggatatcagacaagatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg-gtcgggt 120  Q
    ||||||||| |||||| || || |||||||| |||| |||||   |||| |||| | |||||||||| ||||||||||| || |  |||||| |||| ||    
T  47989461 acacggataccagacacgacacagacactgacacgccgacacaa-taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 47989559  T
Q  121 cggtgtcaaacacggcacatatctgacatcgagacacg 158  Q
    |||||||  ||||| ||||| |||||||||| ||||||    
T  47989560 cggtgtcggacacgacacatgtctgacatcgggacacg 47989597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 17754311 - 17754363
Alignment:
Q  59 gacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtc 111  Q
    |||||||||||| |||||| ||||| |||| ||||||||||||||||| ||||    
T  17754311 gacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtc 17754363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 34371712 - 34371767
Alignment:
Q  57 ctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||| ||||| ||||||    
T  34371712 ctgacaccgctaataatt-gagaaaatcacataattcagtgtaattatatgtgtcgg 34371767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 113
Target Start/End: Complemental strand, 10572661 - 10572594
Alignment:
Q  46 acactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    ||||||| |||| |||||| ||||| ||||||||||||||||| |||| |||||| || || ||||||    
T  10572661 acactgacacgccgacaccactaataatttgagaaaatcacataattcggtgtaattaaatgtgtcgg 10572594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 19324550 - 19324609
Alignment:
Q  47 cactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatat 106  Q
    ||||||||||  ||||| ||| || ||||||||||||||||| ||||||||||| |||||    
T  19324550 cactgatacgtcgacactgctgataatttgagaaaatcacataattcagtgtaattatat 19324609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 25098614 - 25098567
Alignment:
Q  59 gacaccgctaattatttgagaaaatcacatgattcagtgtaactatat 106  Q
    ||||||||| || ||||||||||||||||| ||||||||||| |||||    
T  25098614 gacaccgctgataatttgagaaaatcacataattcagtgtaattatat 25098567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 113
Target Start/End: Original strand, 38503303 - 38503374
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    ||||||||| | || | |||||||||||| |||||||||||||| ||  |||||||||| ||||| ||||||    
T  38503303 acggacactaacacaccgacaccgctaataatttgagaaaatcatatatttcagtgtaattatatgtgtcgg 38503374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 40181871 - 40181918
Alignment:
Q  59 gacaccgctaattatttgagaaaatcacatgattcagtgtaactatat 106  Q
    ||||| |||||| ||||||||||||||||| ||||||||||| |||||    
T  40181871 gacactgctaataatttgagaaaatcacataattcagtgtaattatat 40181918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 1864931 - 1864885
Alignment:
Q  67 taattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    |||| ||||||||||||||||| ||||||||||| ||||| ||||||    
T  1864931 taataatttgagaaaatcacataattcagtgtaattatatgtgtcgg 1864885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 5376576 - 5376518
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    ||||||||| | |||| |||||||||||| |||| ||||||| |||| |||||||||||    
T  5376576 acggacactaacacgccgacaccgctaataatttaagaaaataacataattcagtgtaa 5376518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 12443524 - 12443478
Alignment:
Q  54 acgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    |||| ||||| |||||| ||||||||||||||||| |||||||||||    
T  12443524 acgccgacacagctaataatttgagaaaatcacataattcagtgtaa 12443478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 20157409 - 20157355
Alignment:
Q  59 gacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    |||||||||||| || |||||||||||||| |||||||||||  |||| ||||||    
T  20157409 gacaccgctaataatgtgagaaaatcacataattcagtgtaatcatatgtgtcgg 20157355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 25361881 - 25361955
Alignment:
Q  54 acgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtc-gggtcgggtcggtgtc 127  Q
    |||| |||||| || || ||||||||||||||||| ||||||||||| ||||| |||| | |||| |||||||||    
T  25361881 acgccgacaccactgataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtc 25361955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 39953225 - 39953151
Alignment:
Q  39 gatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    |||| |||||| || |||| |||||||||||| |||| |||||||||||| ||| ||||||| | ||| ||||||    
T  39953225 gatatggacacggaaacgccgacaccgctaataattttagaaaatcacataatttagtgtaattgtatgtgtcgg 39953151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 42359525 - 42359467
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    ||||||||||| ||||||||||  ||||| |||||| |||||||||  |||||||||||    
T  42359525 acggacactgacacgctgacacatctaataatttgaaaaaatcacaaaattcagtgtaa 42359467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 1815237 - 1815298
Alignment:
Q  39 gatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    |||||||||||||| |||| |||||   ||||||||| | |||||||||| |||||||||||    
T  1815237 gatacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaa 1815298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 113
Target Start/End: Complemental strand, 9690345 - 9690279
Alignment:
Q  45 gacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    |||||||| ||||||||||||||||| |  |||||||||||||  |||||||||||  |||| ||||||    
T  9690345 gacactgacacgctgacaccgctaataaactgagaaaatcaca--attcagtgtaatcatatgtgtcgg 9690279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 10475050 - 10474997
Alignment:
Q  45 gacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgt 98  Q
    |||| ||| |||| |||||||||||| | ||||||||||||||| |||||||||    
T  10475050 gacattgacacgccgacaccgctaataacttgagaaaatcacataattcagtgt 10474997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 10577836 - 10577739
Alignment:
Q  17 tacgaacacggatatcagacaagatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcggg 114  Q
    |||| ||||||| | | |||| || |||||||| || |||| ||||| ||||||| ||| |||||||||||  || |||||||| ||||| |||||||    
T  10577836 tacggacacggacaccggacacgacacggacaccgacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggg 10577739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 100
Target Start/End: Complemental strand, 26238171 - 26238130
Alignment:
Q  59 gacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    |||||||||||| |||||||||||| |||| |||||||||||    
T  26238171 gacaccgctaataatttgagaaaataacataattcagtgtaa 26238130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 29229459 - 29229516
Alignment:
Q  57 ctgacaccgctaattatttgagaaaatcacatgattcagt-gtaactatatatgtcgg 113  Q
    ||||||| |||||| ||||||||||||||||||||| ||| |||| ||||| ||||||    
T  29229459 ctgacactgctaataatttgagaaaatcacatgatttagtggtaattatatgtgtcgg 29229516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 5e-18; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 637 - 797
Target Start/End: Complemental strand, 38899469 - 38899309
Alignment:
Q  637 tcaacaactaaattccaaagattttatattaaacaatgttagaaagggaaaacatcattagattatgattatggat---gagaaattttttgcaggaaaa 733  Q
    |||||||||||| |||||| |||| || ||||||||||||||||||| |||| |||||||||||||||||| ||||   ||  |||||||  |  |||||    
T  38899469 tcaacaactaaaatccaaaaattt-attttaaacaatgttagaaaggaaaaa-atcattagattatgattaaggatttggaccaattttt--ctagaaaa 38899374  T
Q  734 gtcagcccacaacgagacgactgctcaaacttccaaa-aatcactgcctttgtcagctggctgtc 797  Q
    ||||||||||||  ||||| || |||  ||||||||| | |||||||||||||||| ||||||||    
T  38899373 gtcagcccacaagtagacgtctactctcacttccaaatattcactgcctttgtcagttggctgtc 38899309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 42 - 106
Target Start/End: Original strand, 21616745 - 21616809
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatat 106  Q
    |||||||| || |||| |||||||||||| ||||||||||||||||| ||||||||||| |||||    
T  21616745 acggacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatat 21616809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 18276496 - 18276575
Alignment:
Q  34 gacaagatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    |||| ||||| |||||||||| || |||||||||||| ||||||||||||||| | ||||||||||| ||| | ||||||    
T  18276496 gacacgatacagacactgatatgccgacaccgctaataatttgagaaaatcacttaattcagtgtaattatgtgtgtcgg 18276575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 113
Target Start/End: Original strand, 23718009 - 23718080
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    ||||||||||| || | |||||||||||| |||||||||| |||||| ||||||||||| ||||| ||||||    
T  23718009 acggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcgg 23718080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 113
Target Start/End: Original strand, 24105681 - 24105752
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    ||||||||||| || | |||||||||||| |||||||||| |||||| ||||||||||| ||||| ||||||    
T  24105681 acggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcgg 24105752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 27286378 - 27286305
Alignment:
Q  32 cagacaagatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactata 105  Q
    |||||| ||||||||||||||||||| |||| ||||||| |||||| || ||||||| ||| ||||||| ||||    
T  27286378 cagacacgatacggacactgatacgccgacaacgctaataatttgataagatcacataattaagtgtaattata 27286305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 44860318 - 44860374
Alignment:
Q  57 ctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    |||||||||||||| ||||||||||||| ||| ||||||||||| ||||| ||||||    
T  44860318 ctgacaccgctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcgg 44860374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 100
Target Start/End: Complemental strand, 21782890 - 21782836
Alignment:
Q  46 acactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    ||||||| |||| ||||| |||||| ||||||||||||||||| |||||||||||    
T  21782890 acactgacacgccgacactgctaataatttgagaaaatcacataattcagtgtaa 21782836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 20242801 - 20242732
Alignment:
Q  44 ggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    ||||||||| |||| |||||  |||||| ||| |||||||||||| ||||||||||| ||||| ||||||    
T  20242801 ggacactgacacgccgacacaactaatttttttagaaaatcacataattcagtgtaattatatgtgtcgg 20242732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 106
Target Start/End: Original strand, 28677895 - 28677956
Alignment:
Q  45 gacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatat 106  Q
    |||||||  |||| |||||||||||| |||||| |||||||||| ||||||||||| |||||    
T  28677895 gacactggaacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattatat 28677956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 31018575 - 31018636
Alignment:
Q  44 ggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactata 105  Q
    ||||||||| ||||  ||||||||||| |||| |||||||||||||||| ||||||| ||||    
T  31018575 ggacactgacacgccaacaccgctaataatttcagaaaatcacatgatttagtgtaattata 31018636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 112
Target Start/End: Complemental strand, 37411303 - 37411250
Alignment:
Q  59 gacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcg 112  Q
    |||||||||||| ||||||||||||||||| ||||||||| | ||||| |||||    
T  37411303 gacaccgctaataatttgagaaaatcacataattcagtgtgattatatgtgtcg 37411250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 25846743 - 25846787
Alignment:
Q  61 caccgctaattatttgagaaaatcacatgattcagtgtaactata 105  Q
    |||| ||||| ||||||||||||||||||||||||||||| ||||    
T  25846743 caccactaataatttgagaaaatcacatgattcagtgtaattata 25846787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 12941031 - 12940953
Alignment:
Q  21 aacacggatatcagacaagatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    |||||||||| |||||| || ||||||||||| ||| ||||||  ||||| |||||| ||||||| || |||||||||||    
T  12941031 aacacggata-cagacacgacacggacactgacacgttgacacaactaataatttgaaaaaatcatataattcagtgtaa 12940953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 30404926 - 30404868
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    ||||||||||| |||| ||||| | |||| |||||| |||||||||| |||||||||||    
T  30404926 acggacactgacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaa 30404868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 111
Target Start/End: Original strand, 31808063 - 31808129
Alignment:
Q  45 gacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtc 111  Q
    |||||||| || | |||||||||||| |||| | |||||||||| ||||||||||| ||||| ||||    
T  31808063 gacactgacacaccgacaccgctaataatttaacaaaatcacataattcagtgtaattatatgtgtc 31808129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 39323247 - 39323305
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    ||||||||||| |||  |||||||||||| |||||| ||||| |||| |||||||||||    
T  39323247 acggacactgaaacgtcgacaccgctaataatttgacaaaattacataattcagtgtaa 39323305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 34785068 - 34784987
Alignment:
Q  32 cagacaagatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    |||||| || ||||||||||| || | |||||  |||||| ||| |||||||||||| ||| ||||||| ||||| ||||||    
T  34785068 cagacacgacacggacactgacacaccgacacaactaatttttttagaaaatcacataatttagtgtaattatatgtgtcgg 34784987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 2e-17; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 29112359 - 29112289
Alignment:
Q  39 gatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatg 109  Q
    |||||||||||||| ||| ||||||| |||||||||||||||||||| || ||||||||||| ||||||||    
T  29112359 gatacggacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatatg 29112289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 2620128 - 2620067
Alignment:
Q  43 cggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactat 104  Q
    |||||||||| |||| |||||| ||||| ||||||||||||||||| ||| |||||||||||    
T  2620128 cggacactgacacgccgacaccactaatcatttgagaaaatcacataattaagtgtaactat 2620067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 34307844 - 34307780
Alignment:
Q  54 acgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgggtcgg 118  Q
    ||||||||||||||||| |||||||||||||||||  |||||||||| ||||  ||||| |||||    
T  34307844 acgctgacaccgctaataatttgagaaaatcacatatttcagtgtaattataagtgtcgtgtcgg 34307780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 105
Target Start/End: Original strand, 8383240 - 8383303
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactata 105  Q
    ||||||| ||| |||| |||||||||||| |||||||||||||| || ||||||||||| ||||    
T  8383240 acggacattgacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattata 8383303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 38 - 113
Target Start/End: Original strand, 18426928 - 18427003
Alignment:
Q  38 agatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    |||||||||||| || |||| |||||| ||||| |||| | |||||||||| |||| |||||| ||||||||||||    
T  18426928 agatacggacacggacacgccgacaccactaataatttcaaaaaatcacataattcggtgtaattatatatgtcgg 18427003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 113
Target Start/End: Original strand, 7928450 - 7928504
Alignment:
Q  59 gacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    |||||||||||| |||||| |||||||||| ||||||||||| ||||| ||||||    
T  7928450 gacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcgg 7928504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 10690321 - 10690267
Alignment:
Q  59 gacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    |||||||||||| || |||||||||||||| ||||||||||| ||||| ||||||    
T  10690321 gacaccgctaataatctgagaaaatcacataattcagtgtaattatatttgtcgg 10690267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 26508085 - 26508151
Alignment:
Q  34 gacaagatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    |||| ||||| || ||||| |||||||||| |||||| |||||| |||||||||| |||||||||||    
T  26508085 gacacgatacagatactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaa 26508151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 49505230 - 49505161
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtc 111  Q
    |||||||| || |||| || ||||||||| ||||||||||||||||| ||| ||||||| ||||| ||||    
T  49505230 acggacaccgacacgcagagaccgctaataatttgagaaaatcacataatttagtgtaattatatgtgtc 49505161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 127
Target Start/End: Complemental strand, 8039893 - 8039825
Alignment:
Q  60 acaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg-gtcgggtcggtgtc 127  Q
    ||||||||||| |||||||||||| | || ||||||||||| ||||| |||||| |||| |||||||||    
T  8039893 acaccgctaataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtc 8039825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 100
Target Start/End: Original strand, 14618754 - 14618822
Alignment:
Q  32 cagacaagatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    |||||| || |||| |||||| ||||||||||| ||||| |||| |||||| ||||| |||||||||||    
T  14618754 cagacacgacacgggcactgagacgctgacacccctaataatttaagaaaaccacataattcagtgtaa 14618822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 100
Target Start/End: Complemental strand, 4987363 - 4987309
Alignment:
Q  46 acactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    ||||||| |||| ||||| |||||| |||||| |||||||||| |||||||||||    
T  4987363 acactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaa 4987309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 97
Target Start/End: Complemental strand, 13620823 - 13620785
Alignment:
Q  59 gacaccgctaattatttgagaaaatcacatgattcagtg 97  Q
    |||||||||| | ||||||||||||||||||||||||||    
T  13620823 gacaccgctagtaatttgagaaaatcacatgattcagtg 13620785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 21720747 - 21720805
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    ||||||||||| |||| ||||||| |||| ||||||||| ||| ||| |||||||||||    
T  21720747 acggacactgacacgccgacaccgataataatttgagaatatctcataattcagtgtaa 21720805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 55401058 - 55401116
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    |||||||||||||||| |||||  ||||| |||||| |||||||||| ||| |||||||    
T  55401058 acggacactgatacgccgacacaactaataatttgaaaaaatcacataatttagtgtaa 55401116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 139
Target Start/End: Complemental strand, 16192809 - 16192728
Alignment:
Q  59 gacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcg-ggtcgggtcggtgtcaaacacggcaca 139  Q
    ||||||| |||| |||||||||||| |||| ||||||||||| ||||| ||| |  |||| |||||||||| ||||| ||||    
T  16192809 gacaccgttaataatttgagaaaataacataattcagtgtaattatatgtgttgatgtcgtgtcggtgtcagacacgacaca 16192728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 8e-17; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 9658852 - 9658933
Alignment:
Q  32 cagacaagatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    |||||| || ||||||||||| |||| |||||||||||| |||| |||||||||||| ||||||||||| ||||| ||||||    
T  9658852 cagacacgacacggacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattatatttgtcgg 9658933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 42 - 175
Target Start/End: Complemental strand, 5000702 - 5000568
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtc-gggtcgggtcggtgtcaaacacggcacat 140  Q
    ||||| ||||| |||  |||||||||||| ||| ||||||||||||||||||||| ||| | |||||||| | |||  |||||||||| ||||| |||||    
T  5000702 acggatactgacacgtcgacaccgctaataattcgagaaaatcacatgattcagtataattttatatgtcagtgtcatgtcggtgtcagacacgacacat 5000603  T
Q  141 atctgacatcgagacacgtccaatccaaaaagtgt 175  Q
    ||| |||| |  |||||||| ||||| || |||||    
T  5000602 atccgacaccaggacacgtctaatccgaagagtgt 5000568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 43 - 113
Target Start/End: Complemental strand, 7265668 - 7265598
Alignment:
Q  43 cggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    |||||||||| ||||  ||||||||||| ||||||||||||||||| ||||||||||| ||||| ||||||    
T  7265668 cggacactgacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcgg 7265598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 113
Target Start/End: Original strand, 9027161 - 9027232
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    ||||||||||| |||| |||||||||||| |||||||| |||||||| |||| |||||| ||||| ||||||    
T  9027161 acggacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcgg 9027232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 111
Target Start/End: Original strand, 19040341 - 19040404
Alignment:
Q  48 actgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtc 111  Q
    ||||| |||| |||||||||||| ||||||||||||||||| ||||||||||| ||||| ||||    
T  19040341 actgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtc 19040404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 140
Target Start/End: Original strand, 26562684 - 26562771
Alignment:
Q  54 acgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcg-ggtcgggtcggtgtcaaacacggcacat 140  Q
    |||| ||||| |||||  ||||||||||||||||| ||||||||||| ||||| |||||  |||| ||||||||| ||||||||||||    
T  26562684 acgccgacactgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcgtgtcggtgtcgaacacggcacat 26562771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 148
Target Start/End: Original strand, 18367831 - 18367926
Alignment:
Q  54 acgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg-gtcgggtcggtgtcaaacacggcacatatctgaca 148  Q
    |||| ||||| ||||||| ||| |||||||||||  || |||||||| ||||| |||||| |||| |||||||||| ||||| ||||| |||||||    
T  18367831 acgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcagacacgacacatgtctgaca 18367926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 9025553 - 9025499
Alignment:
Q  59 gacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    ||||| |||||| ||||||||||||||||| ||||||||||| ||||| ||||||    
T  9025553 gacactgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcgg 9025499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 11784267 - 11784221
Alignment:
Q  67 taattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    |||| ||||||||||||||||||| ||||||||| ||||||||||||    
T  11784267 taataatttgagaaaatcacatgaatcagtgtaattatatatgtcgg 11784221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 112
Target Start/End: Original strand, 13851719 - 13851789
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcg 112  Q
    ||||||||||| |||  |||||||||||| |||||||||||| || | ||||||||||| ||||| |||||    
T  13851719 acggacactgacacgtcgacaccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 13851789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 110
Target Start/End: Original strand, 5462684 - 5462737
Alignment:
Q  57 ctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgt 110  Q
    ||||||||| |||| ||||||||||||||||| ||||| ||||| |||||||||    
T  5462684 ctgacaccgttaataatttgagaaaatcacataattcattgtaattatatatgt 5462737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 5732584 - 5732515
Alignment:
Q  44 ggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    ||||||||| |||| ||||||| |||| |||||||||||||||||  || ||||||| ||||| ||||||    
T  5732584 ggacactgacacgccgacaccgttaataatttgagaaaatcacatattttagtgtaattatatgtgtcgg 5732515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 30866202 - 30866149
Alignment:
Q  60 acaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    ||||||||||| ||||||||||||||||| ||||| ||||| ||||| ||||||    
T  30866202 acaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcgg 30866149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 166
Target Start/End: Complemental strand, 5970159 - 5970059
Alignment:
Q  67 taattatttgagaaaatcacatgattcagtgtaactatatatgtcgg-gtcgggtcggtgtcaaacacggcacatatctgacatcgagacacgtccaatc 165  Q
    |||| |||||| |||||||||| ||||||||||| || | |||| || |||| |||||||||  ||||| ||||| || ||||||| |||||| ||||||    
T  5970159 taataatttgaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacacatttccgacatcgggacacgcccaatc 5970060  T
Q  166 c 166  Q
    |    
T  5970059 c 5970059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 16766682 - 16766738
Alignment:
Q  44 ggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    ||||||||| |||| ||||| |||||| |||||| |||||||||| |||||||||||    
T  16766682 ggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaa 16766738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 105
Target Start/End: Complemental strand, 32511727 - 32511679
Alignment:
Q  57 ctgacaccgctaattatttgagaaaatcacatgattcagtgtaactata 105  Q
    |||||||||||||| |||| |||||||||||| ||||||||||| ||||    
T  32511727 ctgacaccgctaataatttaagaaaatcacataattcagtgtaattata 32511679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 113
Target Start/End: Original strand, 9629378 - 9629437
Alignment:
Q  54 acgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    |||| |||||||| ||| ||||||||||||||||| ||||| ||||| ||||| ||||||    
T  9629378 acgccgacaccgccaataatttgagaaaatcacataattcaatgtaattatatgtgtcgg 9629437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 105
Target Start/End: Complemental strand, 17341740 - 17341677
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactata 105  Q
    |||| |||||| |||| ||||||| |||| |||||| |||||||||| ||||||||||| ||||    
T  17341740 acgggcactgacacgccgacaccgttaataatttgataaaatcacataattcagtgtaattata 17341677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 113
Target Start/End: Complemental strand, 20371186 - 20371115
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    ||||||| ||| |||| |||||||||||| ||||||||||||||||| | ||| ||| | ||||| ||||||    
T  20371186 acggacattgacacgccgacaccgctaataatttgagaaaatcacataactcaatgtgattatatgtgtcgg 20371115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 94
Target Start/End: Complemental strand, 32320740 - 32320693
Alignment:
Q  47 cactgatacgctgacaccgctaattatttgagaaaatcacatgattca 94  Q
    ||||||||||||||||||| |||| |||||| |||||||||| |||||    
T  32320740 cactgatacgctgacaccgttaataatttgataaaatcacataattca 32320693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 113
Target Start/End: Original strand, 7377979 - 7378033
Alignment:
Q  59 gacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    |||||||||||  ||||||||||||||||| ||||| ||||| ||||| ||||||    
T  7377979 gacaccgctaaaaatttgagaaaatcacataattcaatgtaattatatgtgtcgg 7378033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 106
Target Start/End: Complemental strand, 7996452 - 7996390
Alignment:
Q  44 ggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatat 106  Q
    ||||||||| | || ||||| |||||| |||||||||||||| || ||||||||||| |||||    
T  7996452 ggacactgacatgccgacactgctaataatttgagaaaatcatataattcagtgtaattatat 7996390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 106
Target Start/End: Original strand, 8022349 - 8022411
Alignment:
Q  44 ggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatat 106  Q
    ||||||||| | || ||||| |||||| |||||||||||||| || ||||||||||| |||||    
T  8022349 ggacactgacatgccgacactgctaataatttgagaaaatcatataattcagtgtaattatat 8022411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 12696307 - 12696365
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    ||||||||||| |||| ||||| |||||| |||||| ||||| |||| |||||||||||    
T  12696307 acggacactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaa 12696365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 17841665 - 17841607
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    ||||||||||| |||| ||||| |||||| |||||| |||||||||| ||| |||||||    
T  17841665 acggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaa 17841607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 24831861 - 24831919
Alignment:
Q  122 ggtgtcaaacacggcacatatctgacatcgagacacgtccaatccaaaaagtgtctgtg 180  Q
    ||||||||||||  || ||||||||||||| |||||||| ||||| || ||||||||||    
T  24831861 ggtgtcaaacacaacatatatctgacatcgggacacgtctaatccgaagagtgtctgtg 24831919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 127
Target Start/End: Complemental strand, 34073423 - 34073337
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg-gtcgggtcggtgtc 127  Q
    ||||||||||| | ||  ||| ||||||| ||||||||||||| ||| ||||||||||| |||||  ||||| |||| |||||||||    
T  34073423 acggacactgacatgccaacatcgctaataatttgagaaaatctcataattcagtgtaattatatgggtcggtgtcgtgtcggtgtc 34073337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 19147482 - 19147433
Alignment:
Q  39 gatacggacactgatacgctgacaccgctaattatttgagaaaatcacat 88  Q
    |||||||||||||| || | ||||| |||||| |||||||||||||||||    
T  19147482 gatacggacactgacacacggacacagctaataatttgagaaaatcacat 19147433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 3e-16; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 23191877 - 23191937
Alignment:
Q  40 atacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||  ||||||||||    
T  23191877 atacggacactgatacgccgacaccgctaataatttgagaaaatcacatatttcagtgtaa 23191937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 157
Target Start/End: Original strand, 32308105 - 32308219
Alignment:
Q  44 ggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtc-gggtcgggtcggtgtcaaacacggcacatat 142  Q
    ||||||||| |||| |||||||||||| ||||||||||||||||| ||||||||||| | ||| |||| | |||| ||||||||   ||||| ||||| |    
T  32308105 ggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggacacgacacatgt 32308204  T
Q  143 ctgacatcgagacac 157  Q
    | |||| ||||||||    
T  32308205 ccgacaccgagacac 32308219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 19206014 - 19206104
Alignment:
Q  23 cacggatatcagacaagatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    |||||||| |||||| || ||||||||  | |||| |||||||||||| ||||||||||||||||| ||||| | ||| ||||| ||||||    
T  19206014 cacggataccagacacgacacggacaccaacacgccgacaccgctaataatttgagaaaatcacataattcattataattatatgtgtcgg 19206104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 113
Target Start/End: Complemental strand, 22602781 - 22602715
Alignment:
Q  47 cactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    |||||| |||| |||||||  ||||||||||||||||||||| ||||||||||| ||||| ||||||    
T  22602781 cactgacacgccgacaccgtaaattatttgagaaaatcacataattcagtgtaattatatgtgtcgg 22602715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 113
Target Start/End: Original strand, 5835233 - 5835301
Alignment:
Q  45 gacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    ||||||||||||| |||||| |||||  ||||||||||| |||| ||||||||||| ||||| ||||||    
T  5835233 gacactgatacgccgacaccactaatagtttgagaaaataacataattcagtgtaattatatgtgtcgg 5835301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 11722193 - 11722121
Alignment:
Q  23 cacggatatcagacaagatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcag 95  Q
    |||||||| | |||| || ||||||||||| |||| |||||||||||  ||||||||||||||||| ||||||    
T  11722193 cacggataccggacacgacacggacactgacacgccgacaccgctaacaatttgagaaaatcacataattcag 11722121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 105
Target Start/End: Original strand, 1401008 - 1401071
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactata 105  Q
    ||||||||||| ||||||| | ||||||| |||||||||| |||||| ||||||||||| ||||    
T  1401008 acggacactgacacgctgatatcgctaataatttgagaaactcacataattcagtgtaattata 1401071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 113
Target Start/End: Original strand, 20549778 - 20549845
Alignment:
Q  46 acactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    ||||||| || | |||||||||||| ||||||||||||||| | ||||||||||| ||||| ||||||    
T  20549778 acactgacacaccgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcgg 20549845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 9482914 - 9482988
Alignment:
Q  39 gatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    |||||||||||||| || | |||| |||| || ||||||||||||||||  ||||||||||| ||||| ||||||    
T  9482914 gatacggacactgacacaccgacatcgctgataatttgagaaaatcacacaattcagtgtaattatatgtgtcgg 9482988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 111
Target Start/End: Original strand, 22868028 - 22868094
Alignment:
Q  45 gacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtc 111  Q
    |||||||| |||| |||||| ||||| || |||||||||||||| ||||||||||| ||||| ||||    
T  22868028 gacactgacacgccgacaccactaataatatgagaaaatcacataattcagtgtaattatatgtgtc 22868094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 134
Target Start/End: Complemental strand, 26329455 - 26329365
Alignment:
Q  45 gacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg-gtcgggtcggtgtcaaacacg 134  Q
    |||||||| |||| |||| || |||| ||||||||||| ||||  ||||||||||| ||||| |||||| |||| |||||||||| |||||    
T  26329455 gacactgacacgccgacatcgttaataatttgagaaaaacacacaattcagtgtaattatatgtgtcggcgtcgtgtcggtgtcagacacg 26329365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 27945024 - 27945082
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    ||||||||||| |||| |||||| ||||| |||||||||||| |||| |||||||||||    
T  27945024 acggacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaa 27945082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 29787433 - 29787387
Alignment:
Q  54 acgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    |||| |||||||||||| ||||||||||||||||| |||||||||||    
T  29787433 acgccgacaccgctaataatttgagaaaatcacataattcagtgtaa 29787387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 18213135 - 18213038
Alignment:
Q  17 tacgaacacggatatcagacaagatacggacactgatacgctgacaccgctaa-ttatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    |||||||||| | | |||||| || |||||||||||||||| |||||  |||| || ||| |||||||||||| ||| ||||||| ||||| ||||||    
T  18213135 tacgaacacgaacaccagacacgacacggacactgatacgccgacacaactaattttttttagaaaatcacataatttagtgtaattatatgtgtcgg 18213038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 26733277 - 26733358
Alignment:
Q  32 cagacaagatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    |||||| || ||||||||||| |||  |||||||||||| |||||| |||||||||| ||||||| ||| || || ||||||    
T  26733277 cagacacgacacggacactgacacgtcgacaccgctaataatttgacaaaatcacataattcagtctaattaaatgtgtcgg 26733358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 113
Target Start/End: Complemental strand, 3520415 - 3520347
Alignment:
Q  45 gacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    |||| ||| |||||||||||| |||| |||||||||||||| || ||||| ||||| ||||| ||||||    
T  3520415 gacattgacacgctgacaccgataatcatttgagaaaatcatataattcaatgtaattatatgtgtcgg 3520347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 118
Target Start/End: Original strand, 43249968 - 43250052
Alignment:
Q  34 gacaagatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgggtcgg 118  Q
    ||||||| ||||||||||| |||| ||||| | |||| |||||||||||| |||| || |||||||| ||||  ||||| |||||    
T  43249968 gacaagacacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtcgg 43250052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 113
Target Start/End: Original strand, 1433437 - 1433508
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    ||||||| ||| |||| ||||||| |||| ||||||||||||||||| |||  |||||| ||||| ||||||    
T  1433437 acggacattgacacgccgacaccgttaataatttgagaaaatcacatcatttggtgtaattatatgtgtcgg 1433508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 112
Target Start/End: Complemental strand, 6630985 - 6630918
Alignment:
Q  45 gacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcg 112  Q
    |||||||| |||| |||||| ||||| |||||||||| |||| | ||||||||||| ||||| |||||    
T  6630985 gacactgacacgccgacaccactaataatttgagaaagtcacttaattcagtgtaattatatgtgtcg 6630918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 13770657 - 13770732
Alignment:
Q  25 cggatatcagacaagatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    |||| ||| |||| || |||||||||||||||| ||||| |||||| |||| | ||||| |||| |||||||||||    
T  13770657 cggacatcggacacgacacggacactgatacgccgacacagctaataatttaaaaaaattacataattcagtgtaa 13770732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 158
Target Start/End: Original strand, 24339627 - 24339742
Alignment:
Q  44 ggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg-gtcgggtcggtgtcaaacacggcacatat 142  Q
    ||||| ||| |||| ||||| |||||| |||||| |||||||||| ||||||||||| || |  |||||| |||| |||||||||  ||||| ||| |||    
T  24339627 ggacattgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtat 24339726  T
Q  143 ctgacatcgagacacg 158  Q
    | |||| || ||||||    
T  24339727 ccgacaccgggacacg 24339742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 25791639 - 25791682
Alignment:
Q  45 gacactgatacgctgacaccgctaattatttgagaaaatcacat 88  Q
    |||||||| |||| ||||||||||||||||||||||| ||||||    
T  25791639 gacactgacacgccgacaccgctaattatttgagaaattcacat 25791682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 24105661 - 24105719
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    ||||||||||| |||| ||||| |||||| |||||| |||||  |||||||||||||||    
T  24105661 acggacactgacacgccgacacagctaataatttgaaaaaattgcatgattcagtgtaa 24105719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 30731032 - 30731078
Alignment:
Q  54 acgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    |||| |||||||| ||| ||||||||||||||||| |||||||||||    
T  30731032 acgccgacaccgcgaataatttgagaaaatcacataattcagtgtaa 30731078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 32287522 - 32287468
Alignment:
Q  59 gacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    |||||||||||| || |||||||||||||| |||||||| || ||||| ||||||    
T  32287522 gacaccgctaataatctgagaaaatcacataattcagtgcaagtatatgtgtcgg 32287468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 42720963 - 42720897
Alignment:
Q  45 gacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtc 111  Q
    |||||||| ||| ||||||||||||| |||||| |||||||||| ||| | ||||| ||||| ||||    
T  42720963 gacactgacacgttgacaccgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtc 42720897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 113
Target Start/End: Complemental strand, 2425803 - 2425738
Alignment:
Q  48 actgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    ||||| |||| | ||||| |||| ||||||||||||||||| ||| |||| |||||||| ||||||    
T  2425803 actgacacgccggcaccgttaataatttgagaaaatcacataattaagtggaactatatgtgtcgg 2425738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 8842411 - 8842354
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgta 99  Q
    ||||||||| |||| | ||||| |||||  |||||||||||||||||||||| |||||    
T  8842411 acggacactaatacaccgacactgctaagaatttgagaaaatcacatgattctgtgta 8842354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 17851434 - 17851483
Alignment:
Q  62 accgctaattatttgagaaaatcacatgattcagtgtaactatatatgtc 111  Q
    ||||||||| |||| |||||||||||| ||||||||||| ||||| ||||    
T  17851434 accgctaataattttagaaaatcacataattcagtgtaattatatgtgtc 17851483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 92787 - 92848
Alignment:
Q  39 gatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    |||||||||||||| |||| |||||||||||| |||||||||||| |||| |||||||||||    
T  92787 gatacggacactgacacgccgacaccgctaataatttgagaaaattacataattcagtgtaa 92848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 39698521 - 39698582
Alignment:
Q  39 gatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    |||||||||||||| |||||||||| |||||| |||||| |||||||||| |||||||||||    
T  39698521 gatacggacactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaa 39698582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 12264887 - 12264836
Alignment:
Q  60 acaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtc 111  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||| ||||    
T  12264887 acaccgctaattatttgagaaaattacatgattcagtgtaattatatgtgtc 12264836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 15410536 - 15410466
Alignment:
Q  30 atcagacaagatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    |||||||| || ||||||||||| |||| |||||||||||| |||| ||||||| | ||||||||||||||    
T  15410536 atcagacacgacacggacactgacacgccgacaccgctaataatttaagaaaattatatgattcagtgtaa 15410466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 3966488 - 3966557
Alignment:
Q  44 ggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    ||||||||| | || |||||||||||| ||||||||||||||||  ||||||||||| ||||| ||||||    
T  3966488 ggacactgacatgccgacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcgg 3966557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 19579684 - 19579739
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtg 97  Q
    |||||||||||||||| ||||| |||||| ||||||||||||||||| ||| ||||    
T  19579684 acggacactgatacgccgacacagctaataatttgagaaaatcacataatttagtg 19579739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 6326393 - 6326315
Alignment:
Q  22 acacggatatcagacaagatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    ||||||||| | |||| || ||||||||||| |||| |||| ||||| | |||||||||||| |||| |||||||||||    
T  6326393 acacggataccggacacgacacggacactgacacgccgacatcgctagtaatttgagaaaattacataattcagtgtaa 6326315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 127
Target Start/End: Complemental strand, 22423888 - 22423802
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg-gtcgggtcggtgtc 127  Q
    ||||| ||||| || |||||||  ||||| ||||||||||||||||| ||||| | ||| |||||||||||| |||| |||||||||    
T  22423888 acggatactgacaccctgacactactaataatttgagaaaatcacataattcaatataattatatatgtcggtgtcgtgtcggtgtc 22423802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 111
Target Start/End: Original strand, 27144449 - 27144515
Alignment:
Q  45 gacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtc 111  Q
    |||||||| |||| |||||||||||| ||||||| ||||||||| ||| ||||||| ||||| ||||    
T  27144449 gacactgacacgccgacaccgctaataatttgaggaaatcacataatttagtgtaattatatgtgtc 27144515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 106
Target Start/End: Complemental strand, 6471950 - 6471901
Alignment:
Q  57 ctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatat 106  Q
    ||||||| |||||| ||||||||||||||||| ||||||||||| |||||    
T  6471950 ctgacacggctaataatttgagaaaatcacataattcagtgtaattatat 6471901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 30502446 - 30502393
Alignment:
Q  60 acaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    ||||||||||| ||||||||||||||| | ||||||||||| ||||| ||||||    
T  30502446 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcgg 30502393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 30542789 - 30542736
Alignment:
Q  60 acaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    ||||||||||| ||||||||||||||| | ||||||||||| ||||| ||||||    
T  30542789 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcgg 30542736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 112
Target Start/End: Complemental strand, 41091316 - 41091263
Alignment:
Q  59 gacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcg 112  Q
    ||||| |||||| ||||||||||||||||| ||||||||||| ||||| |||||    
T  41091316 gacactgctaatgatttgagaaaatcacataattcagtgtaattatatgtgtcg 41091263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 17593778 - 17593730
Alignment:
Q  62 accgctaattatttgagaaaatcacatgattcagtgtaactatatatgt 110  Q
    ||||||||| ||||||||||||||| | ||||||||||| |||||||||    
T  17593778 accgctaataatttgagaaaatcacgtaattcagtgtaattatatatgt 17593730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 105
Target Start/End: Complemental strand, 28588738 - 28588687
Alignment:
Q  54 acgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactata 105  Q
    |||| ||||||| |||| ||||||||||||||||| ||||||||||| ||||    
T  28588738 acgccgacaccggtaataatttgagaaaatcacataattcagtgtaattata 28588687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 134
Target Start/End: Original strand, 6035469 - 6035558
Alignment:
Q  45 gacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg-gtcgggtcggtgtcaaacacg 134  Q
    |||||||| |||| |||||||||||| ||||||| |||| | || ||||||||||| ||||| |||||| |||| ||||||| || |||||    
T  6035469 gacactgacacgccgacaccgctaataatttgag-aaataatataattcagtgtaattatatttgtcggtgtcgtgtcggtgacagacacg 6035558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 6247597 - 6247663
Alignment:
Q  34 gacaagatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    |||| |||||| ||||||| |||| |||||  ||||| |||||| |||||||||| |||||||||||    
T  6247597 gacacgatacgcacactgacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaa 6247663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 104
Target Start/End: Original strand, 9449452 - 9449514
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactat 104  Q
    ||||||||||  |||| ||||||  |||| ||||||||||||||||| ||||| |||||||||    
T  9449452 acggacactggcacgccgacaccaataataatttgagaaaatcacataattcaatgtaactat 9449514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 14674252 - 14674310
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    ||||||||||| |||| ||||| |||||| |||||| |||||||||| ||| |||||||    
T  14674252 acggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaa 14674310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 21191132 - 21191074
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    ||||||||||| | || ||||| |||||| |||||| |||||||||| |||||||||||    
T  21191132 acggacactgacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaa 21191074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 46 - 100
Target Start/End: Complemental strand, 21576817 - 21576763
Alignment:
Q  46 acactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    ||||||||||||  |||| |||||| |||||| |||||||||| |||||||||||    
T  21576817 acactgatacgccaacacagctaataatttgaaaaaatcacataattcagtgtaa 21576763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 27932230 - 27932276
Alignment:
Q  54 acgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    |||| |||||||||||| |||||||||||| |||| |||||||||||    
T  27932230 acgccgacaccgctaataatttgagaaaattacataattcagtgtaa 27932276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 113
Target Start/End: Original strand, 30098310 - 30098380
Alignment:
Q  43 cggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    |||||||||| |||  || |||| |||| ||||||||||||||||| ||||| ||||| |||| |||||||    
T  30098310 cggacactgacacgacgaaaccgttaataatttgagaaaatcacataattcaatgtaattatagatgtcgg 30098380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 6770526 - 6770583
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgta 99  Q
    ||||||||||| || |||||||  ||||| |||| |||||||||||| ||||||||||    
T  6770526 acggacactgacacactgacacaactaataatttaagaaaatcacataattcagtgta 6770583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 111
Target Start/End: Original strand, 12927629 - 12927706
Alignment:
Q  34 gacaagatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtc 111  Q
    |||| ||||| ||||| || || | |||| ||||||| |||||||||||||| || ||| ||||||| ||||||||||    
T  12927629 gacatgatacagacacggacacaccgacatcgctaataatttgagaaaatcatataatttagtgtaattatatatgtc 12927706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 17123033 - 17123102
Alignment:
Q  44 ggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    ||||||||| ||||  ||||||||||| ||||||||||||||||| ||  |||  || ||||||||||||    
T  17123033 ggacactgacacgccaacaccgctaataatttgagaaaatcacataatcaagtacaattatatatgtcgg 17123102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 158
Target Start/End: Original strand, 18592060 - 18592173
Alignment:
Q  46 acactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg-gtcgggtcggtgtcaaacacggcacatatct 144  Q
    ||||||||| || ||||||||||||  ||| ||||||| |||| ||||| ||||| ||||| || ||| |||| |||||||||  ||||  ||| | |||    
T  18592060 acactgatatgccgacaccgctaatattttaagaaaattacataattcaatgtaattatatgtgccggtgtcgtgtcggtgtcggacacaacacgtgtct 18592159  T
Q  145 gacatcgagacacg 158  Q
    ||||||| ||||||    
T  18592160 gacatcgggacacg 18592173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 36838544 - 36838597
Alignment:
Q  60 acaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    ||||||||||| |||||||||||| |||| ||| ||||||| ||||| ||||||    
T  36838544 acaccgctaataatttgagaaaattacataatttagtgtaattatatgtgtcgg 36838597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 134
Target Start/End: Original strand, 21001 - 21119
Alignment:
Q  17 tacgaacacggatatcagacaagatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg-gt 115  Q
    |||||||||||| | |||||| || ||||||||||| | |||||||| | |||| ||||||||||||||||| | || || ||| ||||| ||||||  |    
T  21001 tacgaacacggacaccagacacgacacggacactgacatgctgacacggttaataatttgagaaaatcacataagtcggtataattatatgtgtcggtat 21100  T
Q  116 cgggtcggtgtcaaacacg 134  Q
    || |||||||||| |||||    
T  21101 cgtgtcggtgtcagacacg 21119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 159
Target Start/End: Complemental strand, 9799 - 9705
Alignment:
Q  66 ctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg-gtcgggtcggtgtcaaacacggcacatatctgacatcgagacacgt 159  Q
    ||||| ||||||||||||||| | ||||||||||| ||||| |||||| |||| || ||||||| ||||| ||| | |||||||||| |||||||    
T  9799 ctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcgtgttggtgtcagacacgacacttgtctgacatcgggacacgt 9705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.000000000001; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 112
Target Start/End: Original strand, 34897068 - 34897138
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcg 112  Q
    |||||||| || |||  |||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||    
T  34897068 acggacacagacacgtcgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcg 34897138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 158
Target Start/End: Complemental strand, 11927152 - 11927045
Alignment:
Q  52 atacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg-gtcgggtcggtgtcaaacacggcacatatctgacatc 150  Q
    |||||| ||||| | |||| |||||| |||||||||| ||||||||||| ||||| |||||| |||| || ||||||| ||||| ||  ||||  |||||    
T  11927152 atacgccgacactgttaataatttgataaaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgtcatacacgacatgtatccaacatc 11927053  T
Q  151 gagacacg 158  Q
    ||||||||    
T  11927052 gagacacg 11927045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 66 - 113
Target Start/End: Original strand, 14134706 - 14134753
Alignment:
Q  66 ctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||||||||    
T  14134706 ctaataatttgagaaaatcacataattcagtgtaattatatatgtcgg 14134753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 113
Target Start/End: Original strand, 7658455 - 7658517
Alignment:
Q  51 gatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    ||||||| |||||| ||||| |||||||||||| |||| ||||||||||| ||||| ||||||    
T  7658455 gatacgccgacaccactaataatttgagaaaattacataattcagtgtaattatatttgtcgg 7658517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 24362275 - 24362209
Alignment:
Q  45 gacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtc 111  Q
    ||||| || |||| |||||||||||| |||||||| |||||||| ||||||||||| ||||| ||||    
T  24362275 gacaccgacacgccgacaccgctaataatttgagagaatcacataattcagtgtaattatatgtgtc 24362209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 111
Target Start/End: Complemental strand, 31109594 - 31109525
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtc 111  Q
    ||||||||||| |||| ||||||| |||| |||||||||||||| |  ||||||| ||||||||| ||||    
T  31109594 acggacactgacacgccgacaccgttaataatttgagaaaatcaaacaattcagtctaactatatgtgtc 31109525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 106
Target Start/End: Complemental strand, 39954352 - 39954291
Alignment:
Q  45 gacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatat 106  Q
    ||||| || |||| |||||||||||| ||||||||||||||||| ||| ||||||| |||||    
T  39954352 gacaccgacacgccgacaccgctaataatttgagaaaatcacataatttagtgtaattatat 39954291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 113
Target Start/End: Complemental strand, 4786411 - 4786343
Alignment:
Q  45 gacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    |||||||| |||| ||||||  |||| |||| |||||||||||| ||||||||||| ||||| ||||||    
T  4786411 gacactgacacgccgacaccattaataatttaagaaaatcacataattcagtgtaattatatgtgtcgg 4786343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 106
Target Start/End: Original strand, 11803246 - 11803306
Alignment:
Q  46 acactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatat 106  Q
    |||||||||| ||||||| | |||| |||| |||||||||||| ||||||||||| |||||    
T  11803246 acactgatacactgacactgttaataatttaagaaaatcacataattcagtgtaattatat 11803306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 113
Target Start/End: Complemental strand, 13844669 - 13844601
Alignment:
Q  45 gacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    ||||| || |||| ||||| |||||| ||||||||||||||||| ||| ||||||| ||||| ||||||    
T  13844669 gacacggacacgccgacactgctaataatttgagaaaatcacataattgagtgtaattatatgtgtcgg 13844601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 18067994 - 18067954
Alignment:
Q  58 tgacaccgctaattatttgagaaaatcacatgattcagtgt 98  Q
    ||||||||||||| ||||||||||||||||| |||||||||    
T  18067994 tgacaccgctaataatttgagaaaatcacataattcagtgt 18067954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 37283896 - 37283828
Alignment:
Q  32 cagacaagatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    |||||| || ||||||||||| | || | |||||||||| || |||||||||||||| |||||||||||    
T  37283896 cagacatgacacggacactgacatgcgggcaccgctaataatctgagaaaatcacataattcagtgtaa 37283828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 106
Target Start/End: Original strand, 4611534 - 4611581
Alignment:
Q  59 gacaccgctaattatttgagaaaatcacatgattcagtgtaactatat 106  Q
    |||||||||||| |||||||||||| |||| ||||||||||| |||||    
T  4611534 gacaccgctaataatttgagaaaataacataattcagtgtaattatat 4611581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 24669419 - 24669474
Alignment:
Q  45 gacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    |||||||| |||||||||||| |||| ||||||| |||| |||| |||||||||||    
T  24669419 gacactgacacgctgacaccgttaataatttgaggaaattacataattcagtgtaa 24669474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 25192447 - 25192360
Alignment:
Q  18 acgaacacggatatcagacaagatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactata 105  Q
    ||||| ||||| ||| |||| |||||||||||||| |||| ||||| |||||| |||||| ||| | |||| ||||||| ||| ||||    
T  25192447 acgaatacggacatcggacacgatacggacactgacacgccgacacagctaataatttgaaaaagtgacataattcagtataattata 25192360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 113
Target Start/End: Complemental strand, 31236641 - 31236582
Alignment:
Q  54 acgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    |||| ||||| |||||| ||||||||||||||||| ||||| ||||| ||||| ||||||    
T  31236641 acgccgacactgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcgg 31236582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 103
Target Start/End: Complemental strand, 41838217 - 41838138
Alignment:
Q  24 acggatatcagacaagatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaacta 103  Q
    ||||| || ||||| |||||||||||||| |||  ||||| |||||| |||| | |||||||||| |||||||| |||||    
T  41838217 acggacataagacacgatacggacactgacacgtcgacacagctaataatttaaaaaaatcacataattcagtgcaacta 41838138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 105
Target Start/End: Original strand, 14692440 - 14692505
Alignment:
Q  39 gatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactata 105  Q
    |||||||||||||| || ||||||| | |||| ||||||| |||| |||| ||||||||||||||||    
T  14692440 gatacggacactgacactctgacacagataataatttgag-aaatgacataattcagtgtaactata 14692505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 105
Target Start/End: Complemental strand, 15816208 - 15816142
Alignment:
Q  39 gatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactata 105  Q
    |||||||||||||| |||| |||||  ||||| |||||| |||||||||| ||| ||||||| ||||    
T  15816208 gatacggacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattata 15816142  T

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Target: scaffold0123 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 44587 - 44530
Alignment:
Q  56 gctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    ||||||||||||||  ||||||||||||||||| ||||||||||| ||||| ||||||    
T  44587 gctgacaccgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcgg 44530  T

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Target: scaffold0018 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 192335 - 192267
Alignment:
Q  32 cagacaagatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    |||||| |||||||||||||| |||| ||||||| |||| |||||||||||| |||| |||| ||||||    
T  192335 cagacacgatacggacactgacacgccgacaccgttaataatttgagaaaattacataattcggtgtaa 192267  T

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Target: scaffold0652 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 538 - 480
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    |||||||||||||||| ||||| |||||| |||||| |||||||||  |||||||||||    
T  538 acggacactgatacgccgacactgctaataatttgaaaaaatcacaaaattcagtgtaa 480  T

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Target: scaffold0103 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 51794 - 51852
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    ||||||||||| |||| ||||| |||||| |||||| |||||||||| |||||||||||    
T  51794 acggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaa 51852  T

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Target: scaffold1528 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 1035 - 1087
Alignment:
Q  59 gacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtc 111  Q
    |||||||||||| |||||| ||||| |||| ||||||||||||||||| ||||    
T  1035 gacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtc 1087  T

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Target: scaffold0027 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 46640 - 46736
Alignment:
Q  17 tacgaacacggatatcagacaagatacggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    |||| ||||||| ||| |||| || ||||||| ||| |||| ||||| | |||| |||||| |||||||||| ||||||||||| || | |||||||    
T  46640 tacggacacggacatcggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtcgg 46736  T

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Target: scaffold0306 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 13383 - 13438
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtg 97  Q
    ||||||||||| |||| |||||  ||||| ||||||||||||||||| ||||||||    
T  13383 acggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtg 13438  T

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Target: scaffold0152 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 21944 - 21889
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtg 97  Q
    ||||||||||| |||| |||||  ||||| ||||||||||||||||| ||||||||    
T  21944 acggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtg 21889  T

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Target: scaffold0223 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 100
Target Start/End: Original strand, 20155 - 20213
Alignment:
Q  42 acggacactgatacgctgacaccgctaattatttgagaaaatcacatgattcagtgtaa 100  Q
    ||||||| ||| |||| ||||| |||||| |||||| |||||||||| |||||||||||    
T  20155 acggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaa 20213  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 135371 - 135317
Alignment:
Q  59 gacaccgctaattatttgagaaaatcacatgattcagtgtaactatatatgtcgg 113  Q
    ||||| |||||| ||||||||||||||||| |||| |||||| ||||| ||||||    
T  135371 gacactgctaataatttgagaaaatcacataattctgtgtaattatatgtgtcgg 135317  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 90851 - 90896
Alignment:
Q  67 taattatttgagaaaatcacatgattcagtgtaactatatatgtcg 112  Q
    |||| |||||||||||||| || ||||||||||| |||||||||||    
T  90851 taataatttgagaaaatcatataattcagtgtaattatatatgtcg 90896  T

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