View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4745_high_11 (Length: 345)
Name: NF4745_high_11
Description: NF4745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4745_high_11 |
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Alignment Details
Target: chr5 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 11 - 310
Target Start/End: Complemental strand, 40740946 - 40740653
Alignment:
| Q |
11 |
cacagagacctgtttggttccatatgaaaccatgttttcctgttaatgtttcaaaccaatcaccccattttgcttgaggatttttccaacctttgaagtt |
110 |
Q |
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| T |
40740946 |
cacagagacctgtttggttccatatgaaaccatgttttcctgttaatgtttcaaaccaatcaccccattttgcttgaggatttttccaacctttgaagtt |
40740847 |
T |
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| Q |
111 |
aagtttcttaggatgaagatagttcatttgagacactgtttcagaatgatgcaatgttggacttggagtgtttttggaacatggtttaaggaactttgct |
210 |
Q |
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| T |
40740846 |
aagtttcttaggatgaagatggttcatttgagacactgtttcggaatgatgcaatgt------tggagtgtttttggaacatggtttaaggaactttgct |
40740753 |
T |
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| Q |
211 |
agtgttttttgtgtggaaactagttcatttgagtttggagaaaccaatgttgcaatacgagaatcgtaaatgcagaagttgtttgattcttttgttgaca |
310 |
Q |
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| T |
40740752 |
agtgttttttgtgtggaaactagttcatgtgagtttggagaaaccaatgttgcaatacgagaatcgtaaatgcagaagttgtttgattcttttgttgaca |
40740653 |
T |
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