View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4745_high_17 (Length: 315)
Name: NF4745_high_17
Description: NF4745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4745_high_17 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 282; Significance: 1e-158; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 16842652 - 16842355
Alignment:
| Q |
1 |
ttaacaacgaaggcaaagaataacaccaatttggaattgttccatttaacatgttctcactcaaacccacatagctcaattttgaagtttttgtgatttc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16842652 |
ttaacaacgaaggcaaagaataacaccaatttggaattgttccatttaacatgttctcactcaaacccacatagctcaattttgaagtttttgtgatttc |
16842553 |
T |
|
| Q |
101 |
aattggaattgggccaaccagtttgttaaatgataaatataaatcagaaagataaggtagatgaaaaagtgatgatggaacttggcctgttagactgtta |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16842552 |
aattggaattgggccaaccagtttgttaaatgataaatataaattagaaagataaggtagatgaaaaagtgatgatggaacttggcctgttagactgtta |
16842453 |
T |
|
| Q |
201 |
gaggaaagtgatagatattctaatttgcttaaatttccataaacaattgggatgctaccgctaaagttattatctgcaagatcacaatgaatgaggtg |
298 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |
|
|
| T |
16842452 |
gaggaaagtgatagatattctaatttgcttaaatttccataaacaattgggatgctaccgctaaagttattaaatacaagatcacaatgaatgaggtg |
16842355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 24217515 - 24217462
Alignment:
| Q |
2 |
taacaacgaaggcaaagaataacaccaatttggaattgttccatttaacatgtt |
55 |
Q |
| |
|
||||||||||||||| ||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
24217515 |
taacaacgaaggcaaggaataacaccattgcggaattgttccatttaacatgtt |
24217462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 272
Target Start/End: Complemental strand, 24217347 - 24217245
Alignment:
| Q |
170 |
tgatgatggaacttggcctgttagactgttagaggaaagtgatagatattctaatttgcttaaatttccataaacaattgggatgctaccgctaaagtta |
269 |
Q |
| |
|
||||||||||| |||||| ||||||| ||| | ||||||| || | | | ||||||| |||||||| || ||||| |||||||| |||| |||||||| |
|
|
| T |
24217347 |
tgatgatggaatttggccacttagactattaaaagaaagtgctaaaaagtttaatttgattaaattttcaaaaacatttgggatgttaccattaaagtta |
24217248 |
T |
|
| Q |
270 |
tta |
272 |
Q |
| |
|
||| |
|
|
| T |
24217247 |
tta |
24217245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 209; Significance: 1e-114; HSPs: 15)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 2 - 298
Target Start/End: Complemental strand, 37400587 - 37400291
Alignment:
| Q |
2 |
taacaacgaaggcaaagaataacaccaatttggaattgttccatttaacatgttctcactcaaacccacatagctcaattttgaagtttttgtgatttca |
101 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||| ||||||||||||||||||| ||||||||||||| |
|
|
| T |
37400587 |
taacaacgaaggcaaagaataacaccaatgtggaattgttccatttaacatgttatcacccaaaaacacatagctcaattttgaacgttttgtgatttca |
37400488 |
T |
|
| Q |
102 |
attggaattgggccaaccagtttgttaaatgataaatataaatcagaaagataaggtagatgaaaaagtgatgatggaacttggcctgttagactgttag |
201 |
Q |
| |
|
||||||||||||||||| ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
37400487 |
attggaattgggccaactagtttgttagatgataaatataaatgagaaagatgaggtagatgaaaaagtgatgatggaacttggcctgttaggttgttag |
37400388 |
T |
|
| Q |
202 |
aggaaagtgatagatattctaatttgcttaaatttccataaacaattgggatgctaccgctaaagttattatctgcaagatcacaatgaatgaggtg |
298 |
Q |
| |
|
||||||||| || |||||| |||||| |||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||| |
|
|
| T |
37400387 |
aggaaagtgctaaatattccaatttgattaaatttccataaacaattgggatgctactactaaagttattaaatccaagatcacaatgaatgaggtg |
37400291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 2 - 298
Target Start/End: Original strand, 37594709 - 37595005
Alignment:
| Q |
2 |
taacaacgaaggcaaagaataacaccaatttggaattgttccatttaacatgttctcactcaaacccacatagctcaattttgaagtttttgtgatttca |
101 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
37594709 |
taacaacgaaggcaaagaataacaccaatgtggaattgttccatttaacatgttatccctcaaacccacatagctcaattttgaacgttttgtgatttca |
37594808 |
T |
|
| Q |
102 |
attggaattgggccaaccagtttgttaaatgataaatataaatcagaaagataaggtagatgaaaaagtgatgatggaacttggcctgttagactgttag |
201 |
Q |
| |
|
||||||||||| ||||| ||||||||| |||||||| |||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
37594809 |
attggaattggcccaactagtttgttatatgataaacctaaaatagaaaggtgaggtagatgaaaaagtgatgatggaacttggcctgttaggttgttaa |
37594908 |
T |
|
| Q |
202 |
aggaaagtgatagatattctaatttgcttaaatttccataaacaattgggatgctaccgctaaagttattatctgcaagatcacaatgaatgaggtg |
298 |
Q |
| |
|
||||||||| || |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
37594909 |
aggaaagtgctaaatattccaatttgattaaatttccataaacaattgggatgctaccgctaaagttattatctgtaagatcataatgaatgaggtg |
37595005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 2 - 298
Target Start/End: Original strand, 37703053 - 37703349
Alignment:
| Q |
2 |
taacaacgaaggcaaagaataacaccaatttggaattgttccatttaacatgttctcactcaaacccacatagctcaattttgaagtttttgtgatttca |
101 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
37703053 |
taacaacgaaggcaaagaataacaccaatgtggaattgttccatttaacatgttatccctcaaacccacatagctcaattttgaacgttttgtgatttca |
37703152 |
T |
|
| Q |
102 |
attggaattgggccaaccagtttgttaaatgataaatataaatcagaaagataaggtagatgaaaaagtgatgatggaacttggcctgttagactgttag |
201 |
Q |
| |
|
||||||||||| ||||| |||||||||||||||||| |||| | |||| | ||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
37703153 |
attggaattggcccaactagtttgttaaatgataaacctaaaataaaaaggtgaggtagatgaaaaagtgatgatggaacttggcctgttagcttgttag |
37703252 |
T |
|
| Q |
202 |
aggaaagtgatagatattctaatttgcttaaatttccataaacaattgggatgctaccgctaaagttattatctgcaagatcacaatgaatgaggtg |
298 |
Q |
| |
|
|||||||||||| |||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
37703253 |
aggaaagtgataaatattccaatttgtttaaatttccataaacaattgggatgcctccgctaaagttattatatgcaagattacaatgaatgaggtg |
37703349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 2 - 298
Target Start/End: Original strand, 37640257 - 37640553
Alignment:
| Q |
2 |
taacaacgaaggcaaagaataacaccaatttggaattgttccatttaacatgttctcactcaaacccacatagctcaattttgaagtttttgtgatttca |
101 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||| |||||||| ||| ||||| ||||||| |
|
|
| T |
37640257 |
taacaacgaaggcaaagaataacaccaatgtggaattgttccatttaacatgttatcatccaaacccacatatctcaatttggaacgttttgcgatttca |
37640356 |
T |
|
| Q |
102 |
attggaattgggccaaccagtttgttaaatgataaatataaatcagaaagataaggtagatgaaaaagtgatgatggaacttggcctgttagactgttag |
201 |
Q |
| |
|
||||||||||||||||| ||||||||| ||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
37640357 |
attggaattgggccaactagtttgttatatgctaaatataaatgagaaagatgaggtagatgaaaaagtgatgatggaacttggcctgttaggttgttaa |
37640456 |
T |
|
| Q |
202 |
aggaaagtgatagatattctaatttgcttaaatttccataaacaattgggatgctaccgctaaagttattatctgcaagatcacaatgaatgaggtg |
298 |
Q |
| |
|
|| ||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |
|
|
| T |
37640457 |
agtaaagtgataaatattccaatttgattaaatttccataaacaattgggatgctaccgctaaagttattaaatccaagatcacaatgaatgaggtg |
37640553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 2 - 298
Target Start/End: Original strand, 37824280 - 37824576
Alignment:
| Q |
2 |
taacaacgaaggcaaagaataacaccaatttggaattgttccatttaacatgttctcactcaaacccacatagctcaattttgaagtttttgtgatttca |
101 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||| ||||| |||||||||||| ||||||||||||| |
|
|
| T |
37824280 |
taacaacgaaggcaaagaataacaccaatgtggaattgttccatttaacatgttaaagcttaaatccacaatactcaattttgaacgttttgtgatttca |
37824379 |
T |
|
| Q |
102 |
attggaattgggccaaccagtttgttaaatgataaatataaatcagaaagataaggtagatgaaaaagtgatgatggaacttggcctgttagactgttag |
201 |
Q |
| |
|
||||||||||||||||| ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
37824380 |
attggaattgggccaactagtttgttagatgataaatataaataagaaagatgaggtagatgaaaaagtgatgatggaacttggcctgttaggttgttag |
37824479 |
T |
|
| Q |
202 |
aggaaagtgatagatattctaatttgcttaaatttccataaacaattgggatgctaccgctaaagttattatctgcaagatcacaatgaatgaggtg |
298 |
Q |
| |
|
||||||||| || |||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
37824480 |
aggaaagtgctaaatattccaatttgattaaatttccataaacatttgggatgctaccgctaaagttattctctgcaagatcacaatgaatgaggtg |
37824576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 2 - 298
Target Start/End: Original strand, 37533485 - 37533781
Alignment:
| Q |
2 |
taacaacgaaggcaaagaataacaccaatttggaattgttccatttaacatgttctcactcaaacccacatagctcaattttgaagtttttgtgatttca |
101 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
37533485 |
taacaacgaaggcaaagaataacaccaatgtggaattgttccatttaacatgttatcactcaaacccacatagctcaattttgaacgttttgtgatttca |
37533584 |
T |
|
| Q |
102 |
attggaattgggccaaccagtttgttaaatgataaatataaatcagaaagataaggtagatgaaaaagtgatgatggaacttggcctgttagactgttag |
201 |
Q |
| |
|
||||||||||| ||||| ||||||||| |||||||| |||| |||||| | ||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
37533585 |
attggaattggcccaactagtttgttatatgataaacctaaaatagaaaggtgaggtagatgaaaaagtgatgatggaacttggcctgttaggttgttag |
37533684 |
T |
|
| Q |
202 |
aggaaagtgatagatattctaatttgcttaaatttccataaacaattgggatgctaccgctaaagttattatctgcaagatcacaatgaatgaggtg |
298 |
Q |
| |
|
|||||||||||| |||||| |||||| ||||||||||||||||| ||||||||||| | ||||||||||| | |||||||||||||||||||||| |
|
|
| T |
37533685 |
aggaaagtgataaatattccaatttgattaaatttccataaacatttgggatgctagcactaaagttattcaatccaagatcacaatgaatgaggtg |
37533781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 2 - 298
Target Start/End: Original strand, 37712009 - 37712305
Alignment:
| Q |
2 |
taacaacgaaggcaaagaataacaccaatttggaattgttccatttaacatgttctcactcaaacccacatagctcaattttgaagtttttgtgatttca |
101 |
Q |
| |
|
|||||| |||||||||||||||||||| | |||||||||||||||||||||||| ||| |||| ||||||||||||||||||| ||||||||||||| |
|
|
| T |
37712009 |
taacaatgaaggcaaagaataacaccactgtggaattgttccatttaacatgttatcatccaaaaacacatagctcaattttgaacgttttgtgatttca |
37712108 |
T |
|
| Q |
102 |
attggaattgggccaaccagtttgttaaatgataaatataaatcagaaagataaggtagatgaaaaagtgatgatggaacttggcctgttagactgttag |
201 |
Q |
| |
|
||||||||||||||||| ||||||||| || ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
37712109 |
attggaattgggccaactagtttgttatctgctaaatataaatgagaaagatgaggtagatgaaaaagtgatgatggaacttggcctgttaggttgttag |
37712208 |
T |
|
| Q |
202 |
aggaaagtgatagatattctaatttgcttaaatttccataaacaattgggatgctaccgctaaagttattatctgcaagatcacaatgaatgaggtg |
298 |
Q |
| |
|
||||||||| || ||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
37712209 |
aggaaagtgctaaatatttcaatttgattaaatttccataaacatttgggatgctaccgctaaagttattatatgcaagataacaatgaatgaggtg |
37712305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 2 - 298
Target Start/End: Original strand, 37697172 - 37697468
Alignment:
| Q |
2 |
taacaacgaaggcaaagaataacaccaatttggaattgttccatttaacatgttctcactcaaacccacatagctcaattttgaagtttttgtgatttca |
101 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||| |||||| |||||||| ||| ||||||||||||| |
|
|
| T |
37697172 |
taacaacgaaggcaaagaataacaccaatgtggaattgttccatttaacatgttatcatccaaaaacacataactcaatttggaacgttttgtgatttca |
37697271 |
T |
|
| Q |
102 |
attggaattgggccaaccagtttgttaaatgataaatataaatcagaaagataaggtagatgaaaaagtgatgatggaacttggcctgttagactgttag |
201 |
Q |
| |
|
||||||||||| ||||| |||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
37697272 |
attggaattggcccaactagtttgttaaatgataaacctaaatgagaaaggtggggtagatgaaaaagtgatgatggaacttggcctgttaggttgttag |
37697371 |
T |
|
| Q |
202 |
aggaaagtgatagatattctaatttgcttaaatttccataaacaattgggatgctaccgctaaagttattatctgcaagatcacaatgaatgaggtg |
298 |
Q |
| |
|
||||||||| || |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| |
|
|
| T |
37697372 |
aggaaagtgctaaatattccaatttgattaaatttccataaacaattgggatgctaccgctaaagttattatttgcaagattacaatcaatgaggtg |
37697468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 2 - 298
Target Start/End: Original strand, 37436092 - 37436388
Alignment:
| Q |
2 |
taacaacgaaggcaaagaataacaccaatttggaattgttccatttaacatgttctcactcaa-acccacatagctcaattttgaagtttttgtgatttc |
100 |
Q |
| |
|
|||||| ||||||||| |||||||||| | |||||||||||||||||||||||| | | || | ||||||||||||||||||| || |||||| ||||| |
|
|
| T |
37436092 |
taacaatgaaggcaaataataacaccactgtggaattgttccatttaacatgttat-attctagacccacatagctcaattttaaacgttttgtaatttc |
37436190 |
T |
|
| Q |
101 |
aattggaattgggccaaccagtttgttaaatgataaatataaatcagaaagataaggtagatgaaaaagtgatgatggaacttggcctgttagactgtta |
200 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
37436191 |
aattggaattgggccaactagtttgttaaatgataaatctaaatgagaaaggtggggtagatgaaaaagtgatgatggaacttggcctgttaggctgttg |
37436290 |
T |
|
| Q |
201 |
gaggaaagtgatagatattctaatttgcttaaatttccataaacaattgggatgctaccgctaaagttattatctgcaagatcacaatgaatgaggtg |
298 |
Q |
| |
|
||||||||||||| |||||| |||||| |||||||| ||||||| |||| |||||||||||||||||||||| | |||| ||||||| ||||||||| |
|
|
| T |
37436291 |
gaggaaagtgataaatattccaatttggttaaattttgataaacatttggaatgctaccgctaaagttattatatccaaggtcacaataaatgaggtg |
37436388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 9 - 185
Target Start/End: Complemental strand, 37392660 - 37392484
Alignment:
| Q |
9 |
gaaggcaaagaataacaccaatttggaattgttccatttaacatgttctcactcaaacccacatagctcaattttgaagtttttgtgatttcaattggaa |
108 |
Q |
| |
|
|||||||||||||||||||| | |||||||| ||||| |||||||| || ||| |||| |||||||||||| ||||||||||| || ||||| |
|
|
| T |
37392660 |
gaaggcaaagaataacaccactgcggaattgtaccattaaacatgttagaacctaaattcacaatgctcaattttgagcgttttgtgatttgaactggaa |
37392561 |
T |
|
| Q |
109 |
ttgggccaaccagtttgttaaatgataaatataaatcagaaagataaggtagatgaaaaagtgatgatggaacttgg |
185 |
Q |
| |
|
|||||||||| ||||||||| ||||||||| |||| |||||| | |||||||||||||||||||||||||||||| |
|
|
| T |
37392560 |
ttgggccaactagtttgttagatgataaatctaaaaaagaaaggttgggtagatgaaaaagtgatgatggaacttgg |
37392484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 78 - 273
Target Start/End: Complemental strand, 37382034 - 37381839
Alignment:
| Q |
78 |
aattttgaagtttttgtgatttcaattggaattgggccaaccagtttgttaaatgataaatataaatcagaaagataaggtagatgaaaaagtgatgatg |
177 |
Q |
| |
|
||||||||| ||| ||||||||| ||||||| || || || | ||| ||| || ||||| || || |||||| | || |||| ||| |||||||||| |
|
|
| T |
37382034 |
aattttgaatgtttagtgatttcagttggaataggacctactaatttattatttgttaaatctagatgagaaagctcagtcagattaaacagtgatgatg |
37381935 |
T |
|
| Q |
178 |
gaacttggcctgttagactgttagaggaaagtgatagatattctaatttgcttaaatttccataaacaattgggatgctaccgctaaagttattat |
273 |
Q |
| |
|
||||| |||| ||||| | ||| ||| | | || ||||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||| |
|
|
| T |
37381934 |
gaactaggccacttagattattaccggagaatcctaaatattctaatttgattaaattttcaaaaacatttgggatgctaccgctaaagttattat |
37381839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 93 - 193
Target Start/End: Original strand, 37429208 - 37429308
Alignment:
| Q |
93 |
gtgatttcaattggaattgggccaaccagtttgttaaatgataaatataaatcagaaagataaggtagatgaaaaagtgatgatggaacttggcctgtta |
192 |
Q |
| |
|
||||||| ||| |||||||||||| | | ||| ||||| ||||||| ||| |||||| | || ||||||||| | ||||||||||||||||||||||| |
|
|
| T |
37429208 |
gtgatttgaatcggaattgggccatctaatttattaaacgataaatctaacatagaaagctgagttagatgaaacaatgatgatggaacttggcctgtta |
37429307 |
T |
|
| Q |
193 |
g |
193 |
Q |
| |
|
| |
|
|
| T |
37429308 |
g |
37429308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 298
Target Start/End: Complemental strand, 37392485 - 37392437
Alignment:
| Q |
250 |
ggatgctaccgctaaagttattatctgcaagatcacaatgaatgaggtg |
298 |
Q |
| |
|
||||| |||||||||||| ||||| | |||||||||||||||||||||| |
|
|
| T |
37392485 |
ggatgttaccgctaaagtaattatatccaagatcacaatgaatgaggtg |
37392437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 37343272 - 37343319
Alignment:
| Q |
8 |
cgaaggcaaagaataacaccaatttggaattgttccatttaacatgtt |
55 |
Q |
| |
|
||||||||||| | ||||||||||| ||||| |||||||||||||||| |
|
|
| T |
37343272 |
cgaaggcaaagtaaaacaccaatttagaatttttccatttaacatgtt |
37343319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 37429119 - 37429164
Alignment:
| Q |
4 |
acaacgaaggcaaagaataacaccaatttggaattgttccatttaa |
49 |
Q |
| |
|
||||||||||||| ||||||||||| | |||||||||||| ||||| |
|
|
| T |
37429119 |
acaacgaaggcaaggaataacaccagtgtggaattgttccgtttaa |
37429164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 138; Significance: 4e-72; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 2 - 271
Target Start/End: Original strand, 14553495 - 14553764
Alignment:
| Q |
2 |
taacaacgaaggcaaagaataacaccaatttggaattgttccatttaacatgttctcactcaaacccacatagctcaattttgaagtttttgtgatttca |
101 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||| ||| |||||||||||||||||||| ||||||||||||| |
|
|
| T |
14553495 |
taacaacgaaggcaaagaataacaccaatgtggaattgttccatttaacatgttataacttaaatccacatagctcaattttgaacgttttgtgatttca |
14553594 |
T |
|
| Q |
102 |
attggaattgggccaaccagtttgttaaatgataaatataaatcagaaagataaggtagatgaaaaagtgatgatggaacttggcctgttagactgttag |
201 |
Q |
| |
|
|||| ||| || ||||| ||||||||| |||||||| ||||| |||||| | |||||||| |||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
14553595 |
attgcaatcggcccaactagtttgttagatgataaacataaaaaagaaagctgaggtagattaaaaagtgatgatggaacttggcctgctaggttgttag |
14553694 |
T |
|
| Q |
202 |
aggaaagtgatagatattctaatttgcttaaatttccataaacaattgggatgctaccgctaaagttatt |
271 |
Q |
| |
|
|| |||| ||| |||||| |||||| ||||||||||| ||||| ||||||||| | ||| |||||||| |
|
|
| T |
14553695 |
agaaaaggtataaatattccaatttgattaaatttccacaaacatctgggatgctccagcttaagttatt |
14553764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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