View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4745_high_24 (Length: 271)
Name: NF4745_high_24
Description: NF4745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4745_high_24 |
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Alignment Details
Target: chr8 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 19 - 259
Target Start/End: Original strand, 8277590 - 8277830
Alignment:
| Q |
19 |
tgtcttaggtaactaaactataccttacaaaccaatgttttaaaaatttaatcgaaaagttcaattggttgaaccgtgaaccacactttcttcacttagg |
118 |
Q |
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| T |
8277590 |
tgtcttaggtaactaaactataccttacaaaccaatgttttaaaaatttaatcgaaaagttcaattggttgaaccgtgaaccacactttcttcacttagg |
8277689 |
T |
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| Q |
119 |
ttattttagcggttcaatcgtgattttgttctgattttaagtagttgaaccttgacctgatgccggtttgatttttaaaacattgcttacaatttaactg |
218 |
Q |
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| T |
8277690 |
ttattttagctgttcaatcgtgattttgttctgattttaagtagttgaacattgacctgatgccggtttgatttttaaaacattgcttacaatttaactg |
8277789 |
T |
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| Q |
219 |
ctaaaacgaccattttcgtcgatgaactgacaccttacctt |
259 |
Q |
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| T |
8277790 |
ctaaaacgaccattttcgtcgatgaactgacaccttacctt |
8277830 |
T |
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