View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4745_low_23 (Length: 293)

Name: NF4745_low_23
Description: NF4745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4745_low_23
NF4745_low_23
[»] chr4 (18 HSPs)
chr4 (130-207)||(4622798-4622875)
chr4 (129-207)||(4634232-4634311)
chr4 (129-207)||(9661802-9661881)
chr4 (129-193)||(1657656-1657721)
chr4 (129-193)||(16991835-16991900)
chr4 (129-200)||(11817028-11817100)
chr4 (130-169)||(44021652-44021691)
chr4 (128-171)||(46729004-46729047)
chr4 (14-56)||(4622682-4622724)
chr4 (129-171)||(41486561-41486603)
chr4 (132-188)||(14542601-14542658)
chr4 (129-193)||(28588524-28588589)
chr4 (131-193)||(54420800-54420863)
chr4 (129-171)||(3673609-3673651)
chr4 (132-165)||(4959664-4959697)
chr4 (129-200)||(3168996-3169068)
chr4 (128-168)||(18935648-18935688)
chr4 (129-207)||(43156725-43156805)
[»] chr5 (14 HSPs)
chr5 (129-207)||(31645778-31645857)
chr5 (129-207)||(6887264-6887343)
chr5 (129-193)||(34894002-34894067)
chr5 (129-207)||(33486656-33486735)
chr5 (129-193)||(28618567-28618632)
chr5 (129-170)||(29310435-29310476)
chr5 (129-171)||(41554472-41554514)
chr5 (133-201)||(41988139-41988208)
chr5 (129-171)||(19646127-19646169)
chr5 (127-164)||(2415393-2415430)
chr5 (129-201)||(41357993-41358066)
chr5 (129-200)||(8812238-8812310)
chr5 (129-201)||(15710495-15710570)
chr5 (131-171)||(37424979-37425019)
[»] chr1 (13 HSPs)
chr1 (132-207)||(27469821-27469897)
chr1 (129-207)||(22344998-22345077)
chr1 (127-201)||(52839378-52839453)
chr1 (131-193)||(6212974-6213037)
chr1 (142-207)||(14717341-14717407)
chr1 (130-172)||(44514077-44514119)
chr1 (129-193)||(30853869-30853934)
chr1 (129-201)||(38646539-38646612)
chr1 (129-199)||(13691844-13691916)
chr1 (127-171)||(52839507-52839551)
chr1 (129-170)||(5832220-5832261)
chr1 (129-193)||(33703595-33703660)
chr1 (129-165)||(44562835-44562871)
[»] chr7 (17 HSPs)
chr7 (129-207)||(40775216-40775295)
chr7 (129-172)||(28015341-28015384)
chr7 (131-198)||(41748589-41748657)
chr7 (129-171)||(24045318-24045360)
chr7 (129-171)||(47749720-47749762)
chr7 (130-171)||(16263373-16263414)
chr7 (129-193)||(24470358-24470423)
chr7 (129-193)||(24475306-24475371)
chr7 (132-165)||(47156388-47156421)
chr7 (131-171)||(23732481-23732521)
chr7 (129-168)||(30992909-30992948)
chr7 (129-190)||(38649444-38649506)
chr7 (144-200)||(23177683-23177740)
chr7 (132-165)||(25855309-25855342)
chr7 (132-193)||(43483558-43483619)
chr7 (129-193)||(49166890-49166955)
chr7 (127-171)||(35141837-35141881)
[»] chr3 (14 HSPs)
chr3 (129-207)||(1165482-1165561)
chr3 (129-193)||(20201144-20201209)
chr3 (129-193)||(20203326-20203391)
chr3 (129-207)||(22844000-22844079)
chr3 (129-207)||(42106060-42106139)
chr3 (129-207)||(43029632-43029711)
chr3 (129-190)||(50460160-50460222)
chr3 (129-201)||(1220301-1220374)
chr3 (129-193)||(41882494-41882559)
chr3 (129-193)||(50519753-50519818)
chr3 (129-207)||(913404-913483)
chr3 (129-187)||(1806546-1806605)
chr3 (128-193)||(43839602-43839667)
chr3 (129-193)||(22286835-22286900)
[»] chr2 (25 HSPs)
chr2 (129-207)||(3390381-3390460)
chr2 (129-207)||(25771394-25771473)
chr2 (129-190)||(6089859-6089921)
chr2 (129-207)||(27024225-27024304)
chr2 (129-207)||(40125338-40125417)
chr2 (130-199)||(3464916-3464986)
chr2 (130-200)||(25237413-25237484)
chr2 (142-199)||(31263053-31263111)
chr2 (129-171)||(37883639-37883681)
chr2 (129-193)||(10589001-10589066)
chr2 (131-172)||(15674062-15674103)
chr2 (129-193)||(25516457-25516522)
chr2 (129-193)||(41176825-41176890)
chr2 (129-193)||(44167795-44167860)
chr2 (129-168)||(7640442-7640481)
chr2 (129-172)||(16880045-16880088)
chr2 (129-171)||(26491289-26491331)
chr2 (128-193)||(43566840-43566905)
chr2 (129-193)||(3602948-3603013)
chr2 (132-165)||(9715634-9715667)
chr2 (131-172)||(17037737-17037778)
chr2 (129-193)||(25623131-25623196)
chr2 (129-193)||(27191421-27191486)
chr2 (129-193)||(27841235-27841300)
chr2 (130-171)||(42105839-42105880)
[»] chr8 (13 HSPs)
chr8 (129-193)||(31874047-31874112)
chr8 (129-200)||(9269977-9270049)
chr8 (130-193)||(13864322-13864386)
chr8 (132-207)||(16937428-16937504)
chr8 (129-200)||(23766698-23766770)
chr8 (129-171)||(10042747-10042789)
chr8 (132-188)||(44295284-44295341)
chr8 (129-207)||(15665488-15665567)
chr8 (129-190)||(9992631-9992693)
chr8 (133-171)||(27534489-27534527)
chr8 (129-171)||(37658952-37658994)
chr8 (129-193)||(36545867-36545932)
chr8 (145-189)||(39067816-39067860)
[»] chr6 (9 HSPs)
chr6 (129-201)||(32457601-32457674)
chr6 (129-207)||(16913277-16913356)
chr6 (129-168)||(19759777-19759816)
chr6 (131-193)||(33194568-33194631)
chr6 (129-171)||(12576564-12576606)
chr6 (129-170)||(32804281-32804322)
chr6 (132-192)||(34020582-34020643)
chr6 (129-169)||(548951-548991)
chr6 (129-207)||(20844956-20845036)
[»] scaffold0045 (1 HSPs)
scaffold0045 (131-193)||(9736-9799)
[»] scaffold1294 (1 HSPs)
scaffold1294 (132-207)||(729-805)
[»] scaffold0012 (1 HSPs)
scaffold0012 (144-207)||(244583-244647)


Alignment Details
Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 130 - 207
Target Start/End: Original strand, 4622798 - 4622875
Alignment:
Q  130 ggtgattttggatcaaaaattgaccttaaatcacccctctttattgatgaagaagaagaaactaaagttttgctgacg 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  4622798 ggtgattttggatcaaaaattgaccttaaatcacccctctttattgatgaagaagaagaaactagagttttggtgacg 4622875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 4634311 - 4634232
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttttgctgacg 207  Q
    |||||||||||| |||||||||||||||||||||||||||||| || ||||||| |||||||||||  |||||| |||||    
T  4634311 gggtgattttgggtcaaaaattgaccttaaatcacccctctttgatggatgaaggagaagaaactagggttttggtgacg 4634232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 9661881 - 9661802
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttttgctgacg 207  Q
    |||||||||||| ||||||||||||| |||||||||||||||| || ||||||| |||||||||||  |||||| |||||    
T  9661881 gggtgattttgggtcaaaaattgaccctaaatcacccctctttgatggatgaaggagaagaaactagggttttggtgacg 9661802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 1657656 - 1657721
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 193  Q
    |||||||||||| ||||||||||||| ||||||||| |||||| || ||||||| |||||||||||    
T  1657656 gggtgattttgggtcaaaaattgaccctaaatcacctctctttgatggatgaaggagaagaaacta 1657721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 16991900 - 16991835
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 193  Q
    |||||||||||| ||||||||||||| ||||||||| |||||| || ||||||| |||||||||||    
T  16991900 gggtgattttgggtcaaaaattgaccctaaatcaccgctctttgatggatgaaggagaagaaacta 16991835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 11817100 - 11817028
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagtttt 200  Q
    |||||||||||| |||||| || ||| |||| ||||||||||| || |||||||||||||||| |||||||||    
T  11817100 gggtgattttgggtcaaaacttaaccctaaaccacccctctttgatggatgaagaagaagaaattaaagtttt 11817028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 169
Target Start/End: Original strand, 44021652 - 44021691
Alignment:
Q  130 ggtgattttggatcaaaaattgaccttaaatcacccctct 169  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  44021652 ggtgattttggatcaaaaattgaccttaaaccacccctct 44021691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 46729004 - 46729047
Alignment:
Q  128 agggtgattttggatcaaaaattgaccttaaatcacccctcttt 171  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||    
T  46729004 agggtgattttgggtcaaaaattgaccctaaatcacccctcttt 46729047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 4622682 - 4622724
Alignment:
Q  14 agacgacaaacacacccacgtcgcactaggacgacgaaatcac 56  Q
    ||||||||||||| |||||||||||||| ||||||||||||||    
T  4622682 agacgacaaacactcccacgtcgcactaagacgacgaaatcac 4622724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 41486603 - 41486561
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt 171  Q
    |||||||||||||||||||||||||| ||||| ||||||||||    
T  41486603 gggtgattttggatcaaaaattgaccctaaataacccctcttt 41486561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 14542601 - 14542658
Alignment:
Q  132 tgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaaga 188  Q
    ||||||||| ||||||||||||| |||||||||||||||| || ||||||| ||||||    
T  14542601 tgattttgggtcaaaaattgaccctaaatcacccctctttgatggatgaaggagaaga 14542658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 28588589 - 28588524
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctct-ttattgatgaagaagaagaaacta 193  Q
    |||||||||||| ||||||||||||| |||||||||| ||| | || ||||||| |||||||||||    
T  28588589 gggtgattttgggtcaaaaattgaccctaaatcacccttctatgatggatgaaggagaagaaacta 28588524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 193
Target Start/End: Original strand, 54420800 - 54420863
Alignment:
Q  131 gtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 193  Q
    |||||||||| ||||||||||||| |||||||||| |||||  | ||||||| |||||||||||    
T  54420800 gtgattttgggtcaaaaattgaccctaaatcacccatctttggtggatgaaggagaagaaacta 54420863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 3673651 - 3673609
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt 171  Q
    ||||||||| || ||||||||||||| ||||||||||||||||    
T  3673651 gggtgatttggggtcaaaaattgaccctaaatcacccctcttt 3673609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 4959664 - 4959697
Alignment:
Q  132 tgattttggatcaaaaattgaccttaaatcaccc 165  Q
    ||||||||||||||||||||||| ||||||||||    
T  4959664 tgattttggatcaaaaattgaccctaaatcaccc 4959697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 3169068 - 3168996
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctctttattg-atgaagaagaagaaactaaagtttt 200  Q
    |||||||||||| |||| |||||||  ||||||||| ||||||  || ||||||||||| |||||| ||||||    
T  3169068 gggtgattttgggtcaataattgactctaaatcacctctctttggtgaatgaagaagaaaaaactagagtttt 3168996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 18935688 - 18935648
Alignment:
Q  128 agggtgattttggatcaaaaattgaccttaaatcacccctc 168  Q
    ||||||||| | | |||||||||||||||||||||||||||    
T  18935688 agggtgattctaggtcaaaaattgaccttaaatcacccctc 18935648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 43156805 - 43156725
Alignment:
Q  129 gggtgattttggatcaaaaattga-ccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttttgctgacg 207  Q
    |||||||||||| ||||||||||| || ||||||||||||||||  | ||||||| ||||||||   |||||||| |||||    
T  43156805 gggtgattttgggtcaaaaattgacccgtaaatcacccctctttggtggatgaaggagaagaaaactaagttttggtgacg 43156725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 31645857 - 31645778
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttttgctgacg 207  Q
    |||||||||||||||||||||||||| |||||||||||||||| || ||||||| |||||||||||  |||||| |||||    
T  31645857 gggtgattttggatcaaaaattgaccctaaatcacccctctttaatggatgaaggagaagaaactagggttttggtgacg 31645778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 6887264 - 6887343
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttttgctgacg 207  Q
    |||||||||||| | ||||||||||| |||||||||||||||| || ||||||| ||||||||||| ||||||| |||||    
T  6887264 gggtgattttgggttaaaaattgaccctaaatcacccctctttgatggatgaaggagaagaaactagagttttggtgacg 6887343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 34894002 - 34894067
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 193  Q
    |||||||||||| ||||||||||||| |||||||||||||||| || ||||||| |||||||||||    
T  34894002 gggtgattttgggtcaaaaattgaccgtaaatcacccctctttgatggatgaaggagaagaaacta 34894067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 33486656 - 33486735
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttta-ttgatgaagaagaagaaactaaagttttgctgacg 207  Q
    |||||||||||| ||||||||||||| ||||||||||||||||| | |||||||  ||||||| ||| |||||| |||||    
T  33486656 gggtgattttgggtcaaaaattgaccctaaatcacccctctttagtggatgaaggtgaagaaattaaggttttggtgacg 33486735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 28618632 - 28618567
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 193  Q
    |||||||||||| | ||||||||||||||||||||||||||||   |||||||| |||||||||||    
T  28618632 gggtgattttgggttaaaaattgaccttaaatcacccctctttggctgatgaaggagaagaaacta 28618567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 29310435 - 29310476
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctctt 170  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  29310435 gggtgattttggatcaaaaattgaccctaaatcacccctctt 29310476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 41554514 - 41554472
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt 171  Q
    |||||||||||||||||||||||| | ||||||||||||||||    
T  41554514 gggtgattttggatcaaaaattgatcctaaatcacccctcttt 41554472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 41988208 - 41988139
Alignment:
Q  133 gattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttttg 201  Q
    ||||||| |||||||||||| | |||||||||||||||| || | ||||| ||||||||||| |||||||    
T  41988208 gattttgaatcaaaaattgatcctaaatcacccctctttgataggtgaaggagaagaaactagagttttg 41988139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 171
Target Start/End: Original strand, 19646127 - 19646169
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt 171  Q
    |||||||||||| ||||| |||||||||||| |||||||||||    
T  19646127 gggtgattttgggtcaaacattgaccttaaaccacccctcttt 19646169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 164
Target Start/End: Complemental strand, 2415430 - 2415393
Alignment:
Q  127 aagggtgattttggatcaaaaattgaccttaaatcacc 164  Q
    |||||||||||||| ||||||||||||| |||||||||    
T  2415430 aagggtgattttgggtcaaaaattgaccctaaatcacc 2415393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 41358066 - 41357993
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttttg 201  Q
    |||||||||||| ||||||||||||| |||||||||  ||||| ||  |||||| | ||||||||| |||||||    
T  41358066 gggtgattttgggtcaaaaattgaccctaaatcacctatctttgatctatgaaggaaaagaaactagagttttg 41357993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 8812238 - 8812310
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagtttt 200  Q
    |||||||||||| | ||||||||||| || ||||||||| |||  | |||||||| |||||||||| ||||||    
T  8812238 gggtgattttgggttaaaaattgaccctatatcacccctttttggtggatgaagatgaagaaactagagtttt 8812310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 15710570 - 15710495
Alignment:
Q  129 gggtgattttggatcaaaaa--ttgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttttg 201  Q
    |||||||||||||| |||||  |||||| |||||||||| ||||| || ||||||| | ||||||||| |||||||    
T  15710570 gggtgattttggataaaaaaaattgaccataaatcacccatctttgatggatgaaggaaaagaaactagagttttg 15710495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 37425019 - 37424979
Alignment:
Q  131 gtgattttggatcaaaaattgaccttaaatcacccctcttt 171  Q
    |||||||||| ||| ||||||||| ||||||||||||||||    
T  37425019 gtgattttgggtcagaaattgaccataaatcacccctcttt 37424979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 27469821 - 27469897
Alignment:
Q  132 tgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttttgctgacg 207  Q
    ||||||||| || ||||||||||||||||||||||||||| || ||||||||||||||||||| | ||||| |||||    
T  27469821 tgattttggttcgaaaattgaccttaaatcacccctctttaatggatgaagaagaagaaactagaattttggtgacg 27469897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 22344998 - 22345077
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttttgctgacg 207  Q
    |||||||||||| ||||||||||| | |||||||||||||||| || ||||||| |||||||||||  |||||| |||||    
T  22344998 gggtgattttgggtcaaaaattgaacctaaatcacccctctttgatggatgaaggagaagaaactagggttttggtgacg 22345077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 52839453 - 52839378
Alignment:
Q  127 aagggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttttg 201  Q
    |||||||||||||| ||||||||||||| |||||||||||||||| || ||||||  |||| |||||| |||||||    
T  52839453 aagggtgattttgggtcaaaaattgaccctaaatcacccctctttaatggatgaaagagaacaaactagagttttg 52839378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 193
Target Start/End: Original strand, 6212974 - 6213037
Alignment:
Q  131 gtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 193  Q
    |||||||||| ||||||||||||| |||||||||||||||| || || |||| |||||||||||    
T  6212974 gtgattttgggtcaaaaattgaccataaatcacccctctttgatggacgaaggagaagaaacta 6213037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 207
Target Start/End: Original strand, 14717341 - 14717407
Alignment:
Q  142 tcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttttgctgacg 207  Q
    ||||||||||||| ||||||||||||||||  | ||||||| ||||||||||| ||||||| |||||    
T  14717341 tcaaaaattgaccctaaatcacccctctttggtggatgaaggagaagaaactagagttttggtgacg 14717407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 172
Target Start/End: Original strand, 44514077 - 44514119
Alignment:
Q  130 ggtgattttggatcaaaaattgaccttaaatcacccctcttta 172  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  44514077 ggtgattttgggtcaaaaattgaccctaaatcacccctcttta 44514119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 30853869 - 30853934
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 193  Q
    |||||||||||| ||||||||||||||| |||||| |||||||  | ||||||| |||||||||||    
T  30853869 gggtgattttgggtcaaaaattgaccttgaatcacacctctttggtggatgaaggagaagaaacta 30853934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 38646612 - 38646539
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttttg 201  Q
    |||||||||||| ||||||||||||| |||||||| ||||||| || ||||||| |||| ||| || |||||||    
T  38646612 gggtgattttgggtcaaaaattgaccataaatcactcctctttgatagatgaaggagaaaaaattagagttttg 38646539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 199
Target Start/End: Original strand, 13691844 - 13691916
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatca-cccctcttta-ttgatgaagaagaagaaactaaagttt 199  Q
    |||||||||||| ||||||||||||| |||| || |||||||||| | |||||||||||||||| ||| ||||    
T  13691844 gggtgattttgggtcaaaaattgaccctaaaccaccccctctttagtggatgaagaagaagaaattaaggttt 13691916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 52839551 - 52839507
Alignment:
Q  127 aagggtgattttggatcaaaaattgaccttaaatcacccctcttt 171  Q
    |||||||||||||| ||||||||||| | ||||||||||||||||    
T  52839551 aagggtgattttgggtcaaaaattgatcataaatcacccctcttt 52839507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 5832261 - 5832220
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctctt 170  Q
    ||||||||| || ||||||||||||| |||||||||||||||    
T  5832261 gggtgatttagggtcaaaaattgaccctaaatcacccctctt 5832220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 33703595 - 33703660
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttta-ttgatgaagaagaagaaacta 193  Q
    |||||||||||| | ||||||||||| ||||||| ||||||||| | ||||||| |||| ||||||    
T  33703595 gggtgattttgggtaaaaaattgaccataaatcatccctctttagtggatgaaggagaaaaaacta 33703660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 165
Target Start/End: Original strand, 44562835 - 44562871
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcaccc 165  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  44562835 gggtgattttgggtcaaaaattgaccctaaatcaccc 44562871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 4e-16; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 40775295 - 40775216
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttttgctgacg 207  Q
    |||||||||||||||||||||||||| |||||||||||||||| || ||||||| |||||||| ||  |||||| |||||    
T  40775295 gggtgattttggatcaaaaattgaccctaaatcacccctctttgatggatgaaggagaagaaattagggttttggtgacg 40775216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 172
Target Start/End: Complemental strand, 28015384 - 28015341
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttta 172  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  28015384 gggtgattttggatcaaaaattgaccctaaatcacccctcttta 28015341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 41748589 - 41748657
Alignment:
Q  131 gtgattttggatcaaaaattgaccttaaatcacccctctttattg-atgaagaagaagaaactaaagtt 198  Q
    |||||||||||||||||||||||| ||||||||  ||||||| || ||||||| |||||||||| ||||    
T  41748589 gtgattttggatcaaaaattgaccgtaaatcacatctctttagtgaatgaagatgaagaaactagagtt 41748657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 171
Target Start/End: Original strand, 24045318 - 24045360
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt 171  Q
    |||||||||||| ||||||||||||||||||||||| ||||||    
T  24045318 gggtgattttgggtcaaaaattgaccttaaatcaccactcttt 24045360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 47749762 - 47749720
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt 171  Q
    |||||||||||| ||||||||||||| ||||||||||||||||    
T  47749762 gggtgattttgggtcaaaaattgaccataaatcacccctcttt 47749720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 16263414 - 16263373
Alignment:
Q  130 ggtgattttggatcaaaaattgaccttaaatcacccctcttt 171  Q
    ||||||||||||||||||||||| | ||||||||||||||||    
T  16263414 ggtgattttggatcaaaaattgatcctaaatcacccctcttt 16263373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 24470423 - 24470358
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 193  Q
    |||||||||||| |||||||||| || ||||||||||||||||  | ||||||| |||||||||||    
T  24470423 gggtgattttgggtcaaaaattgcccctaaatcacccctctttggtggatgaaggagaagaaacta 24470358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 24475371 - 24475306
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 193  Q
    |||||||||||| |||||||||| || ||||||||||||||||  | ||||||| |||||||||||    
T  24475371 gggtgattttgggtcaaaaattgcccctaaatcacccctctttggtggatgaaggagaagaaacta 24475306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 165
Target Start/End: Complemental strand, 47156421 - 47156388
Alignment:
Q  132 tgattttggatcaaaaattgaccttaaatcaccc 165  Q
    ||||||||||||||||||||||||||||||||||    
T  47156421 tgattttggatcaaaaattgaccttaaatcaccc 47156388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 23732481 - 23732521
Alignment:
Q  131 gtgattttggatcaaaaattgaccttaaatcacccctcttt 171  Q
    |||||||||  ||||||||||||||||||||||||||||||    
T  23732481 gtgattttgagtcaaaaattgaccttaaatcacccctcttt 23732521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 168
Target Start/End: Original strand, 30992909 - 30992948
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctc 168  Q
    |||||||||||| ||||||||| |||||||||||||||||    
T  30992909 gggtgattttgggtcaaaaattaaccttaaatcacccctc 30992948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 38649444 - 38649506
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttta-ttgatgaagaagaagaaa 190  Q
    |||||||||||| ||||||||||||  |||||||||||| |||| |||||||||  |||||||    
T  38649444 gggtgattttgggtcaaaaattgactctaaatcacccctttttagttgatgaaggtgaagaaa 38649506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 200
Target Start/End: Original strand, 23177683 - 23177740
Alignment:
Q  144 aaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagtttt 200  Q
    |||||||||||||||||||| | ||||| || ||||||| ||||||||||| ||||||    
T  23177683 aaaaattgaccttaaatcactcatctttaatggatgaaggagaagaaactagagtttt 23177740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 25855309 - 25855342
Alignment:
Q  132 tgattttggatcaaaaattgaccttaaatcaccc 165  Q
    ||||||||||||||||||||||| ||||||||||    
T  25855309 tgattttggatcaaaaattgaccctaaatcaccc 25855342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 43483619 - 43483558
Alignment:
Q  132 tgattttggatcaaaaattgaccttaaatcacccctctttattgatgaagaagaagaaacta 193  Q
    ||||||| ||||||||||||||| |||||||| ||||||  | |||||||| | ||||||||    
T  43483619 tgattttagatcaaaaattgaccctaaatcactcctcttagtggatgaagatgcagaaacta 43483558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 49166955 - 49166890
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 193  Q
    |||||||||| | ||||||||||||| |||||||||| |||||  | ||||||| |||||||||||    
T  49166955 gggtgattttaggtcaaaaattgaccctaaatcacccatctttggtggatgaaggagaagaaacta 49166890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 35141837 - 35141881
Alignment:
Q  127 aagggtgattttggatcaaaaattgaccttaaatcacccctcttt 171  Q
    |||||||||||| | ||||||||||||| |||||||||| |||||    
T  35141837 aagggtgatttttggtcaaaaattgaccctaaatcacccttcttt 35141881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 1165482 - 1165561
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttttgctgacg 207  Q
    |||||||||||| ||||||||||||| |||||||||||||||| || ||||||| |||||||||||  |||||| |||||    
T  1165482 gggtgattttgggtcaaaaattgaccctaaatcacccctctttgatggatgaaggagaagaaactagggttttggtgacg 1165561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 20201144 - 20201209
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 193  Q
    |||||||||||| ||||||||||||| ||||||||||||||||  | ||||||| |||||||||||    
T  20201144 gggtgattttgggtcaaaaattgaccctaaatcacccctctttggtggatgaaggagaagaaacta 20201209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 20203326 - 20203391
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 193  Q
    |||||||||||| ||||||||||||| ||||||||||||||||  | ||||||| |||||||||||    
T  20203326 gggtgattttgggtcaaaaattgaccctaaatcacccctctttggtggatgaaggagaagaaacta 20203391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 22844079 - 22844000
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttttgctgacg 207  Q
    |||||||||||| ||||||||||||||||||||| |||||||| ||  |||||| |||| ||||||  |||||| |||||    
T  22844079 gggtgattttgggtcaaaaattgaccttaaatcagccctctttgatgaatgaaggagaataaactagggttttggtgacg 22844000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 42106139 - 42106060
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttttgctgacg 207  Q
    |||||||||| | ||||||||||||| ||||||||||||||||  | |||||||| ||||||||||  |||||| |||||    
T  42106139 gggtgattttaggtcaaaaattgaccctaaatcacccctctttggtggatgaagatgaagaaactagggttttggtgacg 42106060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 43029711 - 43029632
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttttgctgacg 207  Q
    |||||||||||| ||||||| ||| | |||||||||||||||| || ||||||| |||||||||||  |||||| |||||    
T  43029711 gggtgattttgggtcaaaaaatgatcctaaatcacccctctttgatggatgaaggagaagaaactagggttttggtgacg 43029632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 50460222 - 50460160
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaa 190  Q
    ||||||||||   ||||||||||||||||||||| |||||||| || ||||||||||||||||    
T  50460222 gggtgattttatgtcaaaaattgaccttaaatcatccctctttgatggatgaagaagaagaaa 50460160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 1220301 - 1220374
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttttg 201  Q
    ||||||||||| |||||||||||| | |||||||||||||||| || | ||||| |||||||| || |||||||    
T  1220301 gggtgattttgaatcaaaaattgatcctaaatcacccctctttgataggtgaaggagaagaaattagagttttg 1220374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 41882494 - 41882559
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 193  Q
    |||| ||||||| ||||||||||||| |||||||| ||||||| || ||||||| |||||||||||    
T  41882494 gggtaattttgggtcaaaaattgaccctaaatcactcctctttgatggatgaaggagaagaaacta 41882559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 50519818 - 50519753
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 193  Q
    |||||||||||| ||||||||||||| |||||||||| |||||  | ||||||| |||||||||||    
T  50519818 gggtgattttgggtcaaaaattgaccctaaatcacccatctttggtggatgaaggagaagaaacta 50519753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 913404 - 913483
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttttgctgacg 207  Q
    |||||||||||| ||||||||||||  | ||| ||||||||||  | |||||||| ||||||||||| |||||| |||||    
T  913404 gggtgattttgggtcaaaaattgactatgaattacccctctttggtggatgaagatgaagaaactaaggttttggtgacg 913483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 1806546 - 1806605
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaag 187  Q
    ||||||||| |||||||||||||||| |||| |||||||||||  | |||||||||||||    
T  1806546 gggtgatttgggatcaaaaattgaccctaaaccacccctctttggtggatgaagaagaag 1806605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 193
Target Start/End: Original strand, 43839602 - 43839667
Alignment:
Q  128 agggtgattttggatcaaaaattgaccttaaatcacccctctttattg-atgaagaagaagaaacta 193  Q
    ||||||| ||||| ||||||||||||| |||||||||| |||||| || |||||| |||||||||||    
T  43839602 agggtgactttgg-tcaaaaattgaccctaaatcacccatctttagtgaatgaaggagaagaaacta 43839667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 22286835 - 22286900
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 193  Q
    |||| ||||| | ||||||||||||| ||||||||||||||||  | ||||||| |||||||||||    
T  22286835 gggtaattttaggtcaaaaattgaccctaaatcacccctctttggtggatgaaggagaagaaacta 22286900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 4e-16; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 3390460 - 3390381
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttttgctgacg 207  Q
    |||||||||||| ||||||||||||| |||||||||||||||| || ||||||| |||||||||||  |||||| |||||    
T  3390460 gggtgattttgggtcaaaaattgaccctaaatcacccctctttgatggatgaaggagaagaaactagggttttggtgacg 3390381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 25771473 - 25771394
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttttgctgacg 207  Q
    |||||||||||| ||||||||||||| |||||||||||||||| || ||||||| |||||||||||  |||||| |||||    
T  25771473 gggtgattttgggtcaaaaattgaccctaaatcacccctctttgatggatgaaggagaagaaactagggttttggtgacg 25771394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 6089921 - 6089859
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaa 190  Q
    |||||||||||| |||||||||||||||||||||||||||||| || ||||||| ||||||||    
T  6089921 gggtgattttgggtcaaaaattgaccttaaatcacccctctttgatggatgaaggagaagaaa 6089859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 207
Target Start/End: Original strand, 27024225 - 27024304
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttttgctgacg 207  Q
    |||||||||||| ||||||| ||||| |||||||||| ||||| || ||||||| ||||||||||| ||||||| |||||    
T  27024225 gggtgattttgggtcaaaaaatgaccctaaatcacccatctttgatggatgaaggagaagaaactagagttttggtgacg 27024304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 40125417 - 40125338
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttttgctgacg 207  Q
    |||||||||||| ||||||||| ||| ||||||||||||||||  | ||||||| |||||||||||| |||||| |||||    
T  40125417 gggtgattttgggtcaaaaattaaccctaaatcacccctctttggtggatgaaggagaagaaactaaggttttgatgacg 40125338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 130 - 199
Target Start/End: Complemental strand, 3464986 - 3464916
Alignment:
Q  130 ggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttt 199  Q
    ||||||||||||||||||||||||| ||||||||||||||||  | ||||||| |||||||| || |||||    
T  3464986 ggtgattttggatcaaaaattgaccctaaatcacccctctttggtggatgaaggagaagaaattagagttt 3464916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 200
Target Start/End: Original strand, 25237413 - 25237484
Alignment:
Q  130 ggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagtttt 200  Q
    |||||||||||||||||| |||||  |||||||||||||||| || ||||||| |||| |||||| ||||||    
T  25237413 ggtgattttggatcaaaagttgactctaaatcacccctctttaatagatgaaggagaataaactagagtttt 25237484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 31263053 - 31263111
Alignment:
Q  142 tcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttt 199  Q
    ||||| ||||||| |||||||||||||||| || |||||||||||| ||||||||||||    
T  31263053 tcaaagattgaccctaaatcacccctctttgatggatgaagaagaaaaaactaaagttt 31263111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 37883681 - 37883639
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt 171  Q
    |||||||||||||| ||||||||||| ||||||||||||||||    
T  37883681 gggtgattttggattaaaaattgaccctaaatcacccctcttt 37883639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 10589066 - 10589001
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 193  Q
    |||||||||||| ||||||||||||| |||||||||||| |||  | |||||||| ||||||||||    
T  10589066 gggtgattttgggtcaaaaattgaccctaaatcacccctttttggtggatgaagatgaagaaacta 10589001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 15674062 - 15674103
Alignment:
Q  131 gtgattttggatcaaaaattgaccttaaatcacccctcttta 172  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  15674062 gtgattttgggtcaaaaattgaccctaaatcacccctcttta 15674103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 25516522 - 25516457
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 193  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||  | ||||||| |||||||||||    
T  25516522 gggtgattttgggtcaaatattgaccctaaatcacccctctttggtggatgaaggagaagaaacta 25516457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 41176890 - 41176825
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 193  Q
    ||||| |||||| ||||||||||||| ||||||||||||||||  | ||||||| |||||||||||    
T  41176890 gggtggttttgggtcaaaaattgaccctaaatcacccctctttggtggatgaaggagaagaaacta 41176825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 44167795 - 44167860
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 193  Q
    |||||||||||| ||||||||||||| || |||||||||||||  | ||||||| |||||||||||    
T  44167795 gggtgattttgggtcaaaaattgaccatatatcacccctctttggtggatgaaggagaagaaacta 44167860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 168
Target Start/End: Original strand, 7640442 - 7640481
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctc 168  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  7640442 gggtgattttgggtcaaaaattgaccctaaatcacccctc 7640481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 172
Target Start/End: Original strand, 16880045 - 16880088
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttta 172  Q
    |||||||||||| |||||||||||||  ||||||||||||||||    
T  16880045 gggtgattttgggtcaaaaattgaccaaaaatcacccctcttta 16880088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 26491331 - 26491289
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt 171  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||    
T  26491331 gggtgattttgggtcaaaaattgaacttaaattacccctcttt 26491289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 193
Target Start/End: Complemental strand, 43566905 - 43566840
Alignment:
Q  128 agggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 193  Q
    ||||||||||||| ||||||||||||| | ||||||||||||||  | ||||||| |||||||||||    
T  43566905 agggtgattttgggtcaaaaattgaccct-aatcacccctctttggtggatgaaggagaagaaacta 43566840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 3603013 - 3602948
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 193  Q
    |||||||||||  |||||| |||||| |||||||||| ||||| || ||||||| |||||||||||    
T  3603013 gggtgattttgagtcaaaagttgaccataaatcacccatctttgatggatgaaggagaagaaacta 3602948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 165
Target Start/End: Original strand, 9715634 - 9715667
Alignment:
Q  132 tgattttggatcaaaaattgaccttaaatcaccc 165  Q
    ||||||||||||||||||||||| ||||||||||    
T  9715634 tgattttggatcaaaaattgaccctaaatcaccc 9715667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 17037737 - 17037778
Alignment:
Q  131 gtgattttggatcaaaaattgaccttaaatcacccctcttta 172  Q
    |||||||||| |||||||||||||  ||||||||||||||||    
T  17037737 gtgattttgggtcaaaaattgaccaaaaatcacccctcttta 17037778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 25623131 - 25623196
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 193  Q
    |||||||||||| |||||||||||   |||||||||||||||| ||  |||||||| |||||||||    
T  25623131 gggtgattttgggtcaaaaattgataataaatcacccctctttgatgtatgaagaaaaagaaacta 25623196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 27191421 - 27191486
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 193  Q
    ||||||||| || ||||||||||||| ||||||| ||||||||  | ||||||| |||||||||||    
T  27191421 gggtgatttagggtcaaaaattgaccctaaatcatccctctttggtggatgaaggagaagaaacta 27191486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 27841235 - 27841300
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 193  Q
    ||||||||| || ||||||||||||| ||||||| ||||||||  | ||||||| |||||||||||    
T  27841235 gggtgatttagggtcaaaaattgaccctaaatcatccctctttggtggatgaaggagaagaaacta 27841300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 42105839 - 42105880
Alignment:
Q  130 ggtgattttggatcaaaaattgaccttaaatcacccctcttt 171  Q
    ||||||||||| ||||||||||||| |||| |||||||||||    
T  42105839 ggtgattttgggtcaaaaattgaccctaaagcacccctcttt 42105880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 31874112 - 31874047
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 193  Q
    |||||||||||| ||||||||||||| ||||||||| |||||| || ||||||| |||||||||||    
T  31874112 gggtgattttgggtcaaaaattgaccctaaatcacctctctttgatggatgaaggagaagaaacta 31874047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 9270049 - 9269977
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagtttt 200  Q
    |||||||||||| ||||||||||| | ||||||||||||||||  | ||||||| ||||||||||| ||||||    
T  9270049 gggtgattttgggtcaaaaattgatcataaatcacccctctttggtggatgaaggagaagaaactagagtttt 9269977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 130 - 193
Target Start/End: Complemental strand, 13864386 - 13864322
Alignment:
Q  130 ggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 193  Q
    ||||||||||| |||||| ||||||||||||||||||||||| ||  |||||| |||||||||||    
T  13864386 ggtgattttggctcaaaagttgaccttaaatcacccctctttgataaatgaaggagaagaaacta 13864322  T

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Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 16937428 - 16937504
Alignment:
Q  132 tgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttttgctgacg 207  Q
    ||||||||||||||||||||||| ||||||||||||||||  | |||||||  ||||||||||  |||||| |||||    
T  16937428 tgattttggatcaaaaattgaccctaaatcacccctctttggtggatgaaggtgaagaaactagggttttgatgacg 16937504  T

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Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 23766770 - 23766698
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagtttt 200  Q
    |||||||||||| ||||||||||||||||||||||  ||||||  | ||||||| ||||||||||| ||||||    
T  23766770 gggtgattttgggtcaaaaattgaccttaaatcacatctctttggtggatgaagtagaagaaactagagtttt 23766698  T

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Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 10042789 - 10042747
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt 171  Q
    |||||||||||| ||||||||||||| ||||||||||||||||    
T  10042789 gggtgattttgggtcaaaaattgaccataaatcacccctcttt 10042747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 44295341 - 44295284
Alignment:
Q  132 tgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaaga 188  Q
    ||||||||| ||||||||||||| |||||||||||||||| || ||||||| ||||||    
T  44295341 tgattttgggtcaaaaattgaccctaaatcacccctctttgatggatgaaggagaaga 44295284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 15665567 - 15665488
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctctttatt-gatgaagaagaagaaactaaagttttgctgacg 207  Q
    |||||||||||  |||||| |||||| |||||||||||||||| || |||||||   ||||||||| ||||||| |||||    
T  15665567 gggtgattttgtgtcaaaagttgaccctaaatcacccctctttgttggatgaagggaaagaaactagagttttggtgacg 15665488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 9992693 - 9992631
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctctttattg-atgaagaagaagaaa 190  Q
    |||||||||||| ||||||||||||| ||||||||||| || || || |||||| ||||||||    
T  9992693 gggtgattttgggtcaaaaattgaccctaaatcacccccctctaatgaatgaaggagaagaaa 9992631  T

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Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 171
Target Start/End: Original strand, 27534489 - 27534527
Alignment:
Q  133 gattttggatcaaaaattgaccttaaatcacccctcttt 171  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  27534489 gatttgggatcaaaaattgaccctaaatcacccctcttt 27534527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 37658994 - 37658952
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt 171  Q
    |||||||||||  ||||||||||||| ||||||||||||||||    
T  37658994 gggtgattttgtgtcaaaaattgaccctaaatcacccctcttt 37658952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 36545867 - 36545932
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 193  Q
    ||||||| |||| ||| ||||||||||||||||| ||||||||  | ||||||| |||||||||||    
T  36545867 gggtgatattgggtcacaaattgaccttaaatcatccctctttggtggatgaaggagaagaaacta 36545932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 189
Target Start/End: Original strand, 39067816 - 39067860
Alignment:
Q  145 aaaattgaccttaaatcacccctctttattgatgaagaagaagaa 189  Q
    |||||||||||||||||||||||||| |  || ||||||||||||    
T  39067816 aaaattgaccttaaatcacccctcttaaaagaagaagaagaagaa 39067860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 32457674 - 32457601
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttta-ttgatgaagaagaagaaactaaagttttg 201  Q
    |||||||||||| ||||||||||||  ||||||||||||||||| | ||||||| |||| ||||||| ||||||    
T  32457674 gggtgattttgggtcaaaaattgacgctaaatcacccctctttagtagatgaaggagaaaaaactaaggttttg 32457601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 16913356 - 16913277
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttttgctgacg 207  Q
    ||||||||| || ||||||||||||| ||||||||||||||||  | ||||||| |||||||||||  |||||| |||||    
T  16913356 gggtgatttcgggtcaaaaattgaccctaaatcacccctctttggtggatgaaggagaagaaactagggttttggtgacg 16913277  T

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Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 168
Target Start/End: Complemental strand, 19759816 - 19759777
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctc 168  Q
    |||||||||||| ||||||||||||| |||||||||||||    
T  19759816 gggtgattttgggtcaaaaattgaccctaaatcacccctc 19759777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 193
Target Start/End: Complemental strand, 33194631 - 33194568
Alignment:
Q  131 gtgattttggatcaaaaattgaccttaaatcacccctctt-tattgatgaagaagaagaaacta 193  Q
    |||||||||||||||||||||||| |||||||||  | ||  || |||||||||||||||||||    
T  33194631 gtgattttggatcaaaaattgaccctaaatcaccaatattgaatggatgaagaagaagaaacta 33194568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 171
Target Start/End: Original strand, 12576564 - 12576606
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctcttt 171  Q
    ||||||||| || ||||||||||||| ||||||||||||||||    
T  12576564 gggtgatttagggtcaaaaattgaccctaaatcacccctcttt 12576606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 32804322 - 32804281
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctctt 170  Q
    |||||||||||| ||||||||||||| |||||||||| ||||    
T  32804322 gggtgattttgggtcaaaaattgaccctaaatcacccatctt 32804281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 34020643 - 34020582
Alignment:
Q  132 tgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaact 192  Q
    |||| |||| ||||||||||||| |||| |||||||||||  | ||||||||||||||||||    
T  34020643 tgatgttgggtcaaaaattgaccctaaaccacccctctttggtagatgaagaagaagaaact 34020582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 548951 - 548991
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatcacccctct 169  Q
    |||||||||||| |||||||||||||||| ||||| |||||    
T  548951 gggtgattttgggtcaaaaattgaccttatatcactcctct 548991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 20845036 - 20844956
Alignment:
Q  129 gggtgattttggatcaaaaattgaccttaaatca-cccctcttt-attgatgaagaagaagaaactaaagttttgctgacg 207  Q
    |||||||||||| ||||||||||||||| ||| | |||||||||  | ||| ||| |||||||||||| |||||| |||||    
T  20845036 gggtgattttgggtcaaaaattgaccttgaattaccccctctttggtagataaaggagaagaaactaaggttttggtgacg 20844956  T

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Target: scaffold0045 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 193
Target Start/End: Original strand, 9736 - 9799
Alignment:
Q  131 gtgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaacta 193  Q
    |||||||||| ||||||||||||| ||||||| ||||||||  | ||||||| |||||||||||    
T  9736 gtgattttgggtcaaaaattgaccctaaatcatccctctttggtggatgaaggagaagaaacta 9799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1294 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1294
Description:

Target: scaffold1294; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 207
Target Start/End: Complemental strand, 805 - 729
Alignment:
Q  132 tgattttggatcaaaaattgaccttaaatcacccctcttt-attgatgaagaagaagaaactaaagttttgctgacg 207  Q
    ||||||| | ||||||||||||||||||||||  || |||  | ||||||| ||||||||||| ||||||| |||||    
T  805 tgatttttggtcaaaaattgaccttaaatcacatctttttggtggatgaaggagaagaaactagagttttgatgacg 729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 207
Target Start/End: Complemental strand, 244647 - 244583
Alignment:
Q  144 aaaaattgaccttaaatcacccctctttattg-atgaagaagaagaaactaaagttttgctgacg 207  Q
    ||||||||||| ||||||| ||||||||  || ||||||||||||||||| | |||||| |||||    
T  244647 aaaaattgaccctaaatcaaccctcttttgtggatgaagaagaagaaacttaggttttggtgacg 244583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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