View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4745_low_35 (Length: 239)
Name: NF4745_low_35
Description: NF4745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4745_low_35 |
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Alignment Details
Target: chr4 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 32162987 - 32162768
Alignment:
| Q |
1 |
tcccttagtttcccacattacgaataagcatcaactaaactagtcaaaacaaaactatcagcagcatttgctttgagaatgttacaatgaagctttgtag |
100 |
Q |
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| T |
32162987 |
tcccttagtttcccacatttcgaataagcatcaactaaactagtcaaaacaaaactatcagcagcatttgatttgagaatgttacagtgaagctttgtag |
32162888 |
T |
|
| Q |
101 |
taagaacaatatcacgtaattgagacgctgttttaagcagaatggagaaaacgacgaggtcgttgaaggaaccgagagtggttcgcgcaaggttgtagaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32162887 |
taagaacaatatcacgtaattgagacgctgttttaagcagaatggagaaaacgacgaggtcgttgaaggaaccgagagtggttcgcgcaaggttgtagaa |
32162788 |
T |
|
| Q |
201 |
tgaaacgacgtgggagtgga |
220 |
Q |
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|||||||||||||||||||| |
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| T |
32162787 |
tgaaacgacgtgggagtgga |
32162768 |
T |
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