View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4745_low_38 (Length: 233)
Name: NF4745_low_38
Description: NF4745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4745_low_38 |
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Alignment Details
Target: chr8 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 18 - 228
Target Start/End: Original strand, 40659004 - 40659214
Alignment:
| Q |
18 |
ccaatgacagtgtgacatgtgtccatgttcgatgacatcaacgtcgttatctccaatctgacggagatgttgattatggcatgtcccctggaaccgtctt |
117 |
Q |
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| T |
40659004 |
ccaatgacagtgtgacatgtgtccatgttcgatgacatcaatgtcgttatctccaatctgacggagatgttgattatggcatgtcccctggaaccgtctt |
40659103 |
T |
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| Q |
118 |
tacctcgtagccggtaactcaggtaccgaactgagccaggtgtaagaaggccgatatctgaagcgggaataaaacaccacccaagttgagcctgccctat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || |
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| T |
40659104 |
tacctcgtagccggtaactcaggtaccgaactgagccaggtgtaagaaggccgatatctgaagccggaataaaacaccacccaagttgagcctgccccat |
40659203 |
T |
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| Q |
218 |
gcttctcctct |
228 |
Q |
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| |||| |||| |
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| T |
40659204 |
gattcttctct |
40659214 |
T |
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