View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4746-Insertion-1 (Length: 1020)

Name: NF4746-Insertion-1
Description: NF4746
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4746-Insertion-1
NF4746-Insertion-1
[»] chr4 (11 HSPs)
chr4 (414-733)||(41905939-41906260)
chr4 (7-350)||(41906324-41906663)
chr4 (784-1012)||(41905647-41905867)
chr4 (670-722)||(30637021-30637072)
chr4 (670-722)||(54996931-54996983)
chr4 (659-714)||(37068790-37068845)
chr4 (649-731)||(33815317-33815399)
chr4 (659-716)||(16020037-16020094)
chr4 (659-716)||(17362475-17362532)
chr4 (659-716)||(22539864-22539921)
chr4 (659-716)||(26842880-26842937)
[»] chr5 (5 HSPs)
chr5 (627-715)||(12875812-12875900)
chr5 (659-716)||(7601770-7601827)
chr5 (677-714)||(35160557-35160594)
chr5 (659-716)||(39589753-39589810)
chr5 (659-716)||(42610861-42610918)
[»] chr7 (15 HSPs)
chr7 (628-722)||(41317038-41317132)
chr7 (685-733)||(44533699-44533747)
chr7 (659-714)||(11682099-11682154)
chr7 (673-716)||(41714382-41714425)
chr7 (656-714)||(43268103-43268161)
chr7 (659-716)||(7149371-7149428)
chr7 (685-722)||(10543614-10543651)
chr7 (659-716)||(17173169-17173226)
chr7 (659-716)||(20121382-20121439)
chr7 (659-716)||(21733148-21733205)
chr7 (659-708)||(31283242-31283291)
chr7 (659-716)||(41054771-41054828)
chr7 (659-716)||(41857221-41857278)
chr7 (659-716)||(44457864-44457921)
chr7 (659-716)||(49023755-49023812)
[»] chr1 (9 HSPs)
chr1 (625-715)||(29570680-29570770)
chr1 (656-716)||(16515808-16515868)
chr1 (659-714)||(10296674-10296729)
chr1 (659-714)||(24234619-24234674)
chr1 (670-716)||(31087611-31087657)
chr1 (659-716)||(26095666-26095723)
chr1 (659-716)||(32694485-32694542)
chr1 (659-716)||(40934595-40934652)
chr1 (659-708)||(48970877-48970926)
[»] chr8 (5 HSPs)
chr8 (654-729)||(24566592-24566667)
chr8 (659-716)||(12649560-12649617)
chr8 (670-722)||(38229798-38229850)
chr8 (685-722)||(26187331-26187368)
chr8 (670-715)||(17958986-17959031)
[»] chr2 (13 HSPs)
chr2 (670-722)||(29154138-29154190)
chr2 (625-717)||(474700-474792)
chr2 (656-716)||(38574661-38574721)
chr2 (659-714)||(13421156-13421211)
chr2 (656-714)||(11723788-11723846)
chr2 (670-704)||(30842255-30842289)
chr2 (659-716)||(341392-341449)
chr2 (659-716)||(3322170-3322227)
chr2 (659-716)||(16350672-16350729)
chr2 (659-716)||(18449436-18449493)
chr2 (659-708)||(33274574-33274623)
chr2 (659-716)||(35412054-35412111)
chr2 (659-716)||(44490481-44490538)
[»] chr3 (6 HSPs)
chr3 (656-722)||(2397860-2397926)
chr3 (659-709)||(27812744-27812794)
chr3 (659-716)||(25061477-25061534)
chr3 (659-716)||(39778456-39778513)
chr3 (659-716)||(44919978-44920035)
chr3 (659-716)||(45171755-45171812)
[»] chr6 (7 HSPs)
chr6 (625-724)||(1375836-1375937)
chr6 (625-724)||(1383584-1383685)
chr6 (659-716)||(8129710-8129767)
chr6 (659-716)||(8487942-8487999)
chr6 (659-716)||(17853723-17853780)
chr6 (659-716)||(22568940-22568997)
chr6 (659-716)||(25121577-25121634)


Alignment Details
Target: chr4 (Bit Score: 263; Significance: 1e-146; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 414 - 733
Target Start/End: Complemental strand, 41906260 - 41905939
Alignment:
Q  414 cattgataattaatcgatattgtatagtaacttattatttaggacaccattttttacaacgatatatctaatttggggctgatta--agtaggtaaatat 511  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||    
T  41906260 cattgataattaatcgatattgtatagtaacttattatttaggacaccattttttacaacgatatatctaatttggggctgataaggagtaggtaaatat 41906161  T
Q  512 attgaatactcccttcatctcaaaatatcatgtcttgcatttgcgaaacaaaatattgtcctccaatagctgttgtctcgcattttttacaatgannnnn 611  Q
     |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  41906160 gttgaatactcccatcatctcaaaatatcatgtcttgcatttgcgaaacaaaatattgtcctccaatagctgttgtctcgcattttttacaatgatttag 41906061  T
Q  612 nnnccttctgatgtctcaatcttcaaatctatagccttttacccatatttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggacca 711  Q
       |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  41906060 tttccttgtgatgtctcaatcttcaaatctatagtcttttacccatatttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggatca 41905961  T
Q  712 aaagggcaaaaatgacgtgaaa 733  Q
    ||||||||||||||||||||||    
T  41905960 aaagggcaaaaatgacgtgaaa 41905939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 7 - 350
Target Start/End: Complemental strand, 41906663 - 41906324
Alignment:
Q  7 accttaaaattaaataaggctcaaactacaaatttcaaccttcaaatttattgtgtgccctagtttgacatgacagttaagactaacttcataagcttgc 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  41906663 accttaaaattaaataaggctcaaactacaaatttcaaccttcaaatttattgcgtgccctagtttgacatgacagttaagactaacttcataagcttgc 41906564  T
Q  107 aaattgtcattcttttaaacccaccaagctttgatgtgggcacgtcccttgatggaannnnnnngtgcaatacgtgaatca-ccactcccataatcttta 205  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||       ||||||||||||||||| ||||||||||||||||||    
T  41906563 aaattgtcattcttttaaactcaccaagctttgatgtgggcacgtcccttgatggaa-ttttttgtgcaatacgtgaatcacccactcccataatcttta 41906465  T
Q  206 tttacaaaggcatcatcgatattaataaatttacatggatttacctcnnnnnnnnnnnnnnccattcgtgtcttcaaggttttatttgcttttgaaaaga 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||||              |||| |||||||||||||||||||||||||||||| |||    
T  41906464 tttacaaaggcatcatcgatattaataaatttacatggatttacctc----atgtttttttccatccgtgtcttcaaggttttatttgcttttgaagaga 41906369  T
Q  306 aattaagaataaatttacaaaatcattcttcattagtggcatgag 350  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  41906368 aattaagaataaatttacaaaatcattcttcattagttgcatgag 41906324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 784 - 1012
Target Start/End: Complemental strand, 41905867 - 41905647
Alignment:
Q  784 attgtgtagcaaatgggagggtaagtcacactttgcatgaaaaaattgaatcttgaacaacatatcaaagatatggtcgattaatcccaatacctgaata 883  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  41905867 attgtgtagcaaatgggagg-taagtcacactttgcatgaaaaa-ttgaatcttaaacaacatatcaaagatatggtcgattaat-ccaatacctgaata 41905771  T
Q  884 tttttgataaaaatgtgatatcaannnnnnnnnnnnnnnnnggcttttatgggtcaaatgtgaatgatcctaatgggtacctcttgtgatccggtgaata 983  Q
    ||||||||||||||||||||| ||                  |||||||| ||||||||||||||||| || ||||||| |||||||||||||||| |||    
T  41905770 tttttgataaaaatgtgatattaatttttatttttttt----gcttttattggtcaaatgtgaatgattct-atgggtagctcttgtgatccggtg-ata 41905677  T
Q  984 gtagtg-atgttaagcaacataatattagt 1012  Q
    |||||| ||| ||||||||||| |||||||    
T  41905676 gtagtgaatgataagcaacatattattagt 41905647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 670 - 722
Target Start/End: Complemental strand, 30637072 - 30637021
Alignment:
Q  670 atattagattttaaacttgaaaatccatatgaaaatggaccaaaagggcaaaa 722  Q
    ||||||||||| || |||||||||||||||| ||||||||||||||| |||||    
T  30637072 atattagatttgaagcttgaaaatccatatg-aaatggaccaaaaggacaaaa 30637021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 670 - 722
Target Start/End: Complemental strand, 54996983 - 54996931
Alignment:
Q  670 atattagattttaaacttgaaaatccatatgaaaatggaccaaaagggcaaaa 722  Q
    |||||| |||| ||||||||||||||||||||| ||||| ||||||| |||||    
T  54996983 atattatatttgaaacttgaaaatccatatgaacatggatcaaaaggacaaaa 54996931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 659 - 714
Target Start/End: Original strand, 37068790 - 37068845
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaa 714  Q
    |||||||| | ||||||||||| ||||||||||||  |||||||||||||| ||||    
T  37068790 tttgcataagaatattagatttgaaacttgaaaatgtatatgaaaatggacaaaaa 37068845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 649 - 731
Target Start/End: Complemental strand, 33815399 - 33815317
Alignment:
Q  649 tttacccatatttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagggcaaaaatgacgtga 731  Q
    |||| |||| |||||||||| | || ||||||||||||||||||| |||||| ||| | || |||||| | ||||| ||||||    
T  33815399 tttatccatgtttgcatatgaacatgagattttaaacttgaaaattcatatgcaaacgtactaaaaggtccaaaattacgtga 33815317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 716
Target Start/End: Complemental strand, 16020094 - 16020037
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    |||||||| | ||||||||||| || |||||||||  |||||||||||||| ||||||    
T  16020094 tttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaagg 16020037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 716
Target Start/End: Original strand, 17362475 - 17362532
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    |||||||| | ||||||||||| || |||||||||  |||||||||||||| ||||||    
T  17362475 tttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaagg 17362532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 716
Target Start/End: Original strand, 22539864 - 22539921
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    |||||||| | ||||||||||| || |||||||||  |||||||||||||| ||||||    
T  22539864 tttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaagg 22539921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 716
Target Start/End: Complemental strand, 26842937 - 26842880
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    |||||||| | ||||||||||| || |||||||||  |||||||||||||| ||||||    
T  26842937 tttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaagg 26842880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 4e-16; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 627 - 715
Target Start/End: Original strand, 12875812 - 12875900
Alignment:
Q  627 tcaatcttcaaatctatagccttttacccatatttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaag 715  Q
    ||||||||||||||||| |  ||||| | || |||||||| | ||||||||||| || ||||||||||||||| |||||||||||||||    
T  12875812 tcaatcttcaaatctatggttttttatctatgtttgcataagaatattagatttaaagcttgaaaatccatataaaaatggaccaaaag 12875900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 716
Target Start/End: Original strand, 7601770 - 7601827
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    |||||||| | ||||||||||| || |||||||||  |||||||||||||| ||||||    
T  7601770 tttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaagg 7601827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 677 - 714
Target Start/End: Complemental strand, 35160594 - 35160557
Alignment:
Q  677 attttaaacttgaaaatccatatgaaaatggaccaaaa 714  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  35160594 atttgaaacttgaaaatccatatgaaaatggactaaaa 35160557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 716
Target Start/End: Original strand, 39589753 - 39589810
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    |||||||| | ||||||||||| || |||||||||  |||||||||||||| ||||||    
T  39589753 tttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaagg 39589810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 716
Target Start/End: Complemental strand, 42610918 - 42610861
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    |||||||| | ||||||||||| || |||||||||  |||||||||||||| ||||||    
T  42610918 tttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaagg 42610861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 628 - 722
Target Start/End: Original strand, 41317038 - 41317132
Alignment:
Q  628 caatcttcaaatctatagccttttacccatatttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagggcaaaa 722  Q
    |||||||||||||||| | |||| |  ||| ||||| |||| || |||||||| || ||||||||| ||||||||||||||||||||| ||||||    
T  41317038 caatcttcaaatctatggtctttcattcatgtttgcctatgaattttagatttaaagcttgaaaatacatatgaaaatggaccaaaagtgcaaaa 41317132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 685 - 733
Target Start/End: Original strand, 44533699 - 44533747
Alignment:
Q  685 cttgaaaatccatatgaaaatggaccaaaagggcaaaaatgacgtgaaa 733  Q
    |||||||||||||||| ||| ||||||||||| ||||||| ||||||||    
T  44533699 cttgaaaatccatatgcaaacggaccaaaaggacaaaaataacgtgaaa 44533747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 659 - 714
Target Start/End: Original strand, 11682099 - 11682154
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaa 714  Q
    |||||||| | ||||||||||| ||||||||||||  |||||||||||||| ||||    
T  11682099 tttgcataagaatattagatttgaaacttgaaaatatatatgaaaatggacaaaaa 11682154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 673 - 716
Target Start/End: Original strand, 41714382 - 41714425
Alignment:
Q  673 ttagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    |||||||||| ||||||||||||||||| ||||||| |||||||    
T  41714382 ttagattttatacttgaaaatccatatgcaaatggatcaaaagg 41714425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 656 - 714
Target Start/End: Original strand, 43268103 - 43268161
Alignment:
Q  656 atatttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaa 714  Q
    ||||||||||| | ||||||||||| || |||||||||| |||| |||||||| |||||    
T  43268103 atatttgcataagaatattagatttaaagcttgaaaatcgatataaaaatggatcaaaa 43268161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 716
Target Start/End: Complemental strand, 7149428 - 7149371
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    |||||||| | ||||||||||| ||||||||||||  |||| ||||||||| ||||||    
T  7149428 tttgcataagaatattagatttgaaacttgaaaatgtatataaaaatggacaaaaagg 7149371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 685 - 722
Target Start/End: Original strand, 10543614 - 10543651
Alignment:
Q  685 cttgaaaatccatatgaaaatggaccaaaagggcaaaa 722  Q
    ||||||||||||||| |||||||||||||||| |||||    
T  10543614 cttgaaaatccatataaaaatggaccaaaaggacaaaa 10543651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 716
Target Start/End: Complemental strand, 17173226 - 17173169
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    |||||||| | ||||||||||| || |||||||||  |||||||||||||| ||||||    
T  17173226 tttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaagg 17173169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 716
Target Start/End: Original strand, 20121382 - 20121439
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    |||||||| | ||||||||||| || |||||||||  |||||||||||||| ||||||    
T  20121382 tttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaagg 20121439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 716
Target Start/End: Complemental strand, 21733205 - 21733148
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    |||||||| | |||||| ||||||| |||||||||  |||||||||||||| ||||||    
T  21733205 tttgcataagaatattatattttaagcttgaaaatgtatatgaaaatggacaaaaagg 21733148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 708
Target Start/End: Complemental strand, 31283291 - 31283242
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatgga 708  Q
    |||||||| | ||||||||||| ||||||||||||  |||||||||||||    
T  31283291 tttgcataagaatattagatttgaaacttgaaaatgtatatgaaaatgga 31283242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 716
Target Start/End: Original strand, 41054771 - 41054828
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    |||||||| | ||||||||||| || || |||||| ||||| ||||||||||||||||    
T  41054771 tttgcataagaatattagatttaaagctcgaaaattcatataaaaatggaccaaaagg 41054828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 716
Target Start/End: Complemental strand, 41857278 - 41857221
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    |||||||| | ||||||||||| || |||||||||  |||||||||||||| ||||||    
T  41857278 tttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaagg 41857221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 716
Target Start/End: Complemental strand, 44457921 - 44457864
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    |||||||| | ||||||||||| || |||||||||  |||||||||||||| ||||||    
T  44457921 tttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaagg 44457864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 716
Target Start/End: Original strand, 49023755 - 49023812
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    |||||||| | ||||||||||| ||||||||||||  |||| ||||||||| ||||||    
T  49023755 tttgcataagaatattagatttgaaacttgaaaatgtatataaaaatggacaaaaagg 49023812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 625 - 715
Target Start/End: Original strand, 29570680 - 29570770
Alignment:
Q  625 tctcaatcttcaaatctatagccttttacccatatttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaag 715  Q
    ||||||||||||||||||| | |||| ||| || |||||||||| || || ||||| || ||||||||| |||||| ||||||||||||||    
T  29570680 tctcaatcttcaaatctatggtctttcacctatgtttgcatatgaatctttgatttgaagcttgaaaatacatatgcaaatggaccaaaag 29570770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 656 - 716
Target Start/End: Original strand, 16515808 - 16515868
Alignment:
Q  656 atatttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    ||||||||||| | ||||||||||| || |||||||||  |||||||||||||| ||||||    
T  16515808 atatttgcatacgaatattagatttgaaccttgaaaatgtatatgaaaatggacaaaaagg 16515868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 659 - 714
Target Start/End: Complemental strand, 10296729 - 10296674
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaa 714  Q
    |||||||| | ||||||||||| || ||||||||| ||||||||||||||| ||||    
T  10296729 tttgcataagaatattagatttgaagcttgaaaatgcatatgaaaatggacaaaaa 10296674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 659 - 714
Target Start/End: Complemental strand, 24234674 - 24234619
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaa 714  Q
    |||||||| | |||| |||||| || ||||||||||||||||||||||||| ||||    
T  24234674 tttgcataagaatataagatttgaagcttgaaaatccatatgaaaatggactaaaa 24234619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 670 - 716
Target Start/End: Complemental strand, 31087657 - 31087611
Alignment:
Q  670 atattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    ||||||||||| ||||||||||||||| ||| ||||| |||||||||    
T  31087657 atattagatttgaaacttgaaaatccaaatgtaaatgaaccaaaagg 31087611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 716
Target Start/End: Original strand, 26095666 - 26095723
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    |||||||| | ||||||||||| || |||||||||  |||||||||||||| ||||||    
T  26095666 tttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaagg 26095723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 716
Target Start/End: Original strand, 32694485 - 32694542
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    |||||||| | ||||||||||| || |||||||||  |||||||||||||| ||||||    
T  32694485 tttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaagg 32694542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 716
Target Start/End: Original strand, 40934595 - 40934652
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    |||||||| | ||||||||||| || |||||||||  |||||||||||||| ||||||    
T  40934595 tttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaagg 40934652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 708
Target Start/End: Original strand, 48970877 - 48970926
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatgga 708  Q
    |||||||| | ||||||||||| ||||||||||||  |||||||||||||    
T  48970877 tttgcataagaatattagatttgaaacttgaaaatgtatatgaaaatgga 48970926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 654 - 729
Target Start/End: Original strand, 24566592 - 24566667
Alignment:
Q  654 ccatatttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagggcaaaaatgacgt 729  Q
    |||| |||| ||||| ||||||||||| ||||||||| ||||||||| ||| ||||||||||| | ||||||||||    
T  24566592 ccatgtttgtatatgaatattagatttgaaacttgaacatccatatgcaaacggaccaaaaggaccaaaatgacgt 24566667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 659 - 716
Target Start/End: Complemental strand, 12649617 - 12649560
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    |||||||| | ||||||||||| || ||||||||||||||||||||| ||||||||||    
T  12649617 tttgcataagaatattagatttgaagcttgaaaatccatatgaaaatagaccaaaagg 12649560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 670 - 722
Target Start/End: Original strand, 38229798 - 38229850
Alignment:
Q  670 atattagattttaaacttgaaaatccatatgaaaatggaccaaaagggcaaaa 722  Q
    |||||||||||||| ||||||||||||||| ||||||||| |||||| |||||    
T  38229798 atattagattttaagcttgaaaatccatataaaaatggacaaaaaggacaaaa 38229850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 685 - 722
Target Start/End: Original strand, 26187331 - 26187368
Alignment:
Q  685 cttgaaaatccatatgaaaatggaccaaaagggcaaaa 722  Q
    |||||||||||||||||||||||||||||||| |||||    
T  26187331 cttgaaaatccatatgaaaatggaccaaaaggacaaaa 26187368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 670 - 715
Target Start/End: Original strand, 17958986 - 17959031
Alignment:
Q  670 atattagattttaaacttgaaaatccatatgaaaatggaccaaaag 715  Q
    ||||||||||| ||| ||||||||| |||||||||| |||||||||    
T  17958986 atattagatttgaaatttgaaaatctatatgaaaatagaccaaaag 17959031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000002; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 670 - 722
Target Start/End: Complemental strand, 29154190 - 29154138
Alignment:
Q  670 atattagattttaaacttgaaaatccatatgaaaatggaccaaaagggcaaaa 722  Q
    ||||||||||| || |||||| ||||||||||||||||||||||||| |||||    
T  29154190 atattagatttgaagcttgaagatccatatgaaaatggaccaaaaggacaaaa 29154138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 625 - 717
Target Start/End: Original strand, 474700 - 474792
Alignment:
Q  625 tctcaatcttcaaatctatagccttttacccatatttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaaggg 717  Q
    ||||| ||||||||||||| | | || |||||| |||||||||| || ||| |||| || ||||||||| |||||| ||| ||||||| ||||    
T  474700 tctcagtcttcaaatctatggtccttcacccatgtttgcatatgaatcttaaatttgaagcttgaaaattcatatgcaaaaggaccaagaggg 474792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 656 - 716
Target Start/End: Complemental strand, 38574721 - 38574661
Alignment:
Q  656 atatttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    ||||||||||| | ||||||||||| || |||||||||  |||||||||||||| ||||||    
T  38574721 atatttgcataagaatattagatttgaagcttgaaaatatatatgaaaatggacaaaaagg 38574661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 659 - 714
Target Start/End: Complemental strand, 13421211 - 13421156
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaa 714  Q
    |||||||| | ||||||||||| ||||||||||||  |||||||||||||| ||||    
T  13421211 tttgcataagaatattagatttgaaacttgaaaatgtatatgaaaatggacaaaaa 13421156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 656 - 714
Target Start/End: Complemental strand, 11723846 - 11723788
Alignment:
Q  656 atatttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaa 714  Q
    ||||||||||| | ||||||||||| || |||||||||  |||||||||||||| ||||    
T  11723846 atatttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaa 11723788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 670 - 704
Target Start/End: Original strand, 30842255 - 30842289
Alignment:
Q  670 atattagattttaaacttgaaaatccatatgaaaa 704  Q
    ||||||||||| |||||||||||||||||||||||    
T  30842255 atattagatttgaaacttgaaaatccatatgaaaa 30842289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 716
Target Start/End: Complemental strand, 341449 - 341392
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    |||||||| | ||||||||||| || |||||||||  |||||||||||||| ||||||    
T  341449 tttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaagg 341392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 716
Target Start/End: Original strand, 3322170 - 3322227
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    |||||||| | ||||||||||| || |||||||||  |||||||||||||| ||||||    
T  3322170 tttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaagg 3322227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 716
Target Start/End: Complemental strand, 16350729 - 16350672
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    |||||||| | ||||||||||| || |||||||||  |||||||||||||| ||||||    
T  16350729 tttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaagg 16350672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 716
Target Start/End: Complemental strand, 18449493 - 18449436
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    |||||||| | ||||||||||| || |||||||||  |||||||||||||| ||||||    
T  18449493 tttgcataagaatattagatttgaatcttgaaaatgtatatgaaaatggacaaaaagg 18449436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 708
Target Start/End: Original strand, 33274574 - 33274623
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatgga 708  Q
    |||||||| | ||||||||||| ||||||||||||  |||||||||||||    
T  33274574 tttgcataagaatattagatttgaaacttgaaaatgtatatgaaaatgga 33274623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 716
Target Start/End: Original strand, 35412054 - 35412111
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    |||||||| | ||||||||||| || |||||||||  |||||||||||||| ||||||    
T  35412054 tttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaagg 35412111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 716
Target Start/End: Original strand, 44490481 - 44490538
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    |||||||| | ||||||||||| || |||||||||  |||||||||||||| ||||||    
T  44490481 tttgcataagaatattagatttgaagcttgaaaatatatatgaaaatggacaaaaagg 44490538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000004; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 656 - 722
Target Start/End: Complemental strand, 2397926 - 2397860
Alignment:
Q  656 atatttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagggcaaaa 722  Q
    |||||| |||| | ||||||||||| ||  ||||||||||||||||||||||| ||||||| |||||    
T  2397926 atatttacataagaatattagatttgaagtttgaaaatccatatgaaaatggatcaaaaggacaaaa 2397860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 659 - 709
Target Start/End: Original strand, 27812744 - 27812794
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggac 709  Q
    |||||||| | ||||||||||| ||||||||||||  ||||||||||||||    
T  27812744 tttgcataagaatattagatttgaaacttgaaaatgtatatgaaaatggac 27812794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 716
Target Start/End: Original strand, 25061477 - 25061534
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    |||||||| | ||||||||||| || |||||||||  |||||||||||||| ||||||    
T  25061477 tttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaagg 25061534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 716
Target Start/End: Original strand, 39778456 - 39778513
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    |||||||| | ||||||||||| || |||||||||  |||||||||||||| ||||||    
T  39778456 tttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaagg 39778513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 716
Target Start/End: Complemental strand, 44920035 - 44919978
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    |||||||| | ||||||||||| || |||||||||  |||||||||||||| ||||||    
T  44920035 tttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaagg 44919978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 716
Target Start/End: Original strand, 45171755 - 45171812
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    |||||||| | ||||||||||| || |||||||||  |||||||||||||| ||||||    
T  45171755 tttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaagg 45171812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 31; Significance: 0.00000009; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 625 - 724
Target Start/End: Complemental strand, 1375937 - 1375836
Alignment:
Q  625 tctcaatcttcaaatctatagccttttacccatatttgcatatgcatattagattttaaacttgaaaatccatatg--aaaatggaccaaaagggcaaaa 722  Q
    |||||||||||||||||||   |||| |  ||| ||||| |||| |  |||||||| |||||||||||| ||||||  || ||||||||||| |||||||    
T  1375937 tctcaatcttcaaatctatgttctttcattcatgtttgcctatgaaccttagatttaaaacttgaaaatacatatgcaaatatggaccaaaatggcaaaa 1375838  T
Q  723 at 724  Q
    ||    
T  1375837 at 1375836  T

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Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 625 - 724
Target Start/End: Complemental strand, 1383685 - 1383584
Alignment:
Q  625 tctcaatcttcaaatctatagccttttacccatatttgcatatgcatattagattttaaacttgaaaatccatatg--aaaatggaccaaaagggcaaaa 722  Q
    |||||||||||||||||||   |||| |  ||| ||||| |||| |  |||||||| |||||||||||| ||||||  || ||||||||||| |||||||    
T  1383685 tctcaatcttcaaatctatgttctttcattcatgtttgcctatgaaccttagatttaaaacttgaaaatacatatgcaaatatggaccaaaatggcaaaa 1383586  T
Q  723 at 724  Q
    ||    
T  1383585 at 1383584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 716
Target Start/End: Original strand, 8129710 - 8129767
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    |||||||| | ||||||||||| || |||||||||  |||||||||||||| ||||||    
T  8129710 tttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaagg 8129767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 716
Target Start/End: Complemental strand, 8487999 - 8487942
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    |||||||| | ||||||||||| || |||||||||  |||||||||||||| ||||||    
T  8487999 tttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaagg 8487942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 716
Target Start/End: Complemental strand, 17853780 - 17853723
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    |||||||||| ||||||||||| || |||||||||  |||| ||||||||| ||||||    
T  17853780 tttgcatatgaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaagg 17853723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 716
Target Start/End: Original strand, 22568940 - 22568997
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    |||||||| | ||||||||||| || |||||||||  |||||||||||||| ||||||    
T  22568940 tttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaagg 22568997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 716
Target Start/End: Complemental strand, 25121634 - 25121577
Alignment:
Q  659 tttgcatatgcatattagattttaaacttgaaaatccatatgaaaatggaccaaaagg 716  Q
    |||||||| | ||||||||||| ||||||||||||  |||| ||||||||| ||||||    
T  25121634 tttgcataagaatattagatttgaaacttgaaaatgtatataaaaatggacaaaaagg 25121577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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