View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4746_high_10 (Length: 290)

Name: NF4746_high_10
Description: NF4746
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4746_high_10
NF4746_high_10
[»] chr8 (37 HSPs)
chr8 (138-259)||(43292578-43292699)
chr8 (133-263)||(9633086-9633216)
chr8 (138-259)||(34745267-34745388)
chr8 (145-259)||(38298518-38298632)
chr8 (138-280)||(43932045-43932187)
chr8 (138-259)||(29690446-29690567)
chr8 (138-259)||(13831892-13832013)
chr8 (138-259)||(34604791-34604912)
chr8 (138-249)||(43409861-43409972)
chr8 (142-265)||(38494253-38494376)
chr8 (138-281)||(44579888-44580031)
chr8 (173-259)||(40645727-40645813)
chr8 (138-259)||(35583893-35584014)
chr8 (138-251)||(45372715-45372828)
chr8 (140-259)||(9550126-9550245)
chr8 (138-259)||(7548514-7548636)
chr8 (138-259)||(35794544-35794664)
chr8 (200-259)||(45180111-45180170)
chr8 (138-243)||(5356803-5356908)
chr8 (178-249)||(9420614-9420685)
chr8 (142-257)||(24599683-24599798)
chr8 (138-175)||(43932059-43932096)
chr8 (164-259)||(41624755-41624850)
chr8 (138-259)||(43292585-43292706)
chr8 (127-259)||(9633098-9633230)
chr8 (162-241)||(14547794-14547873)
chr8 (138-193)||(43409844-43409899)
chr8 (145-218)||(7693091-7693164)
chr8 (145-218)||(10839780-10839853)
chr8 (161-243)||(27988108-27988190)
chr8 (161-243)||(28045410-28045492)
chr8 (121-175)||(29690537-29690591)
chr8 (145-218)||(1223140-1223213)
chr8 (138-175)||(13831885-13831922)
chr8 (138-175)||(34604882-34604919)
chr8 (138-175)||(35583984-35584021)
chr8 (138-175)||(40645720-40645757)
[»] chr7 (47 HSPs)
chr7 (138-280)||(24164526-24164668)
chr7 (138-269)||(29559444-29559575)
chr7 (138-259)||(41088862-41088983)
chr7 (138-259)||(41487801-41487922)
chr7 (138-259)||(45025604-45025725)
chr7 (141-269)||(10674136-10674264)
chr7 (138-249)||(47612300-47612411)
chr7 (127-278)||(41395660-41395811)
chr7 (138-259)||(33901048-33901169)
chr7 (139-259)||(13860235-13860354)
chr7 (139-259)||(22618174-22618294)
chr7 (136-259)||(27320302-27320425)
chr7 (138-259)||(40198614-40198735)
chr7 (138-259)||(47484038-47484159)
chr7 (138-228)||(12806918-12807008)
chr7 (139-252)||(33039584-33039699)
chr7 (155-234)||(7999490-7999569)
chr7 (139-265)||(31902961-31903087)
chr7 (138-259)||(37006473-37006595)
chr7 (138-279)||(18064732-18064873)
chr7 (138-252)||(28248441-28248559)
chr7 (142-268)||(14543282-14543408)
chr7 (138-259)||(3633208-3633329)
chr7 (158-259)||(47280191-47280291)
chr7 (180-265)||(40234777-40234862)
chr7 (138-259)||(45123255-45123376)
chr7 (138-212)||(48948952-48949028)
chr7 (127-191)||(24932382-24932446)
chr7 (157-259)||(39413857-39413959)
chr7 (158-259)||(7456436-7456537)
chr7 (145-259)||(45533247-45533361)
chr7 (146-259)||(29835102-29835214)
chr7 (139-259)||(10674140-10674260)
chr7 (138-175)||(22618264-22618301)
chr7 (139-175)||(29559448-29559484)
chr7 (142-206)||(40599936-40600000)
chr7 (138-259)||(3633201-3633322)
chr7 (138-172)||(41088956-41088990)
chr7 (138-251)||(47612315-47612428)
chr7 (139-175)||(24164617-24164653)
chr7 (140-175)||(33039572-33039607)
chr7 (141-175)||(40234779-40234813)
chr7 (138-175)||(27320395-27320432)
chr7 (138-175)||(41487892-41487929)
chr7 (139-167)||(19372737-19372765)
chr7 (139-191)||(28936065-28936117)
chr7 (211-259)||(41863664-41863712)
[»] chr4 (57 HSPs)
chr4 (138-259)||(52966412-52966533)
chr4 (138-259)||(52136716-52136837)
chr4 (138-259)||(54673320-54673441)
chr4 (138-259)||(25756729-25756850)
chr4 (138-259)||(54864074-54864195)
chr4 (138-249)||(56491099-56491210)
chr4 (138-259)||(4418107-4418228)
chr4 (142-259)||(31853081-31853198)
chr4 (143-259)||(33622897-33623013)
chr4 (138-277)||(35877324-35877463)
chr4 (138-280)||(29686396-29686538)
chr4 (138-259)||(32193492-32193613)
chr4 (138-259)||(33615789-33615910)
chr4 (138-259)||(42159983-42160104)
chr4 (142-259)||(43141783-43141900)
chr4 (136-259)||(35929018-35929140)
chr4 (138-280)||(43556687-43556830)
chr4 (139-218)||(24100770-24100849)
chr4 (138-259)||(36196382-36196503)
chr4 (138-259)||(37895272-37895393)
chr4 (138-259)||(50511262-50511383)
chr4 (138-218)||(8347550-8347630)
chr4 (139-259)||(27587263-27587383)
chr4 (139-241)||(9813491-9813593)
chr4 (161-259)||(40592729-40592827)
chr4 (135-280)||(28460753-28460898)
chr4 (121-243)||(1140858-1140980)
chr4 (142-259)||(1205097-1205213)
chr4 (144-232)||(50511471-50511559)
chr4 (142-211)||(22210803-22210872)
chr4 (146-278)||(22019932-22020064)
chr4 (142-218)||(23558964-23559040)
chr4 (142-218)||(52278025-52278101)
chr4 (138-259)||(25874709-25874831)
chr4 (138-259)||(54673327-54673448)
chr4 (138-259)||(19350629-19350748)
chr4 (186-259)||(7086189-7086262)
chr4 (139-196)||(24100884-24100941)
chr4 (146-241)||(54357925-54358020)
chr4 (138-193)||(32193485-32193540)
chr4 (200-258)||(38208321-38208379)
chr4 (138-251)||(56491082-56491195)
chr4 (138-175)||(1100906-1100943)
chr4 (138-175)||(7086232-7086269)
chr4 (138-175)||(29686410-29686447)
chr4 (138-174)||(25756722-25756758)
chr4 (138-269)||(27587256-27587387)
chr4 (145-196)||(23226967-23227018)
chr4 (205-259)||(1100913-1100967)
chr4 (145-191)||(53225729-53225775)
chr4 (138-175)||(4418198-4418235)
chr4 (138-175)||(33622890-33622927)
chr4 (138-175)||(36196375-36196412)
chr4 (138-175)||(43141776-43141813)
chr4 (138-175)||(52136709-52136746)
chr4 (138-175)||(54864165-54864202)
chr4 (199-259)||(50511405-50511465)
[»] chr3 (40 HSPs)
chr3 (138-246)||(53703740-53703848)
chr3 (138-259)||(31376192-31376313)
chr3 (138-259)||(39616928-39617049)
chr3 (138-259)||(45113751-45113872)
chr3 (138-259)||(48643621-48643742)
chr3 (138-258)||(19227326-19227446)
chr3 (139-265)||(48346461-48346587)
chr3 (138-259)||(16123767-16123887)
chr3 (138-246)||(44118213-44118321)
chr3 (138-257)||(21944299-21944418)
chr3 (139-240)||(36191485-36191589)
chr3 (142-259)||(27302096-27302213)
chr3 (138-259)||(53284326-53284447)
chr3 (139-259)||(43901592-43901712)
chr3 (142-259)||(19899626-19899744)
chr3 (139-250)||(45746482-45746593)
chr3 (169-243)||(8769175-8769249)
chr3 (138-259)||(50100211-50100333)
chr3 (169-246)||(8764273-8764350)
chr3 (139-259)||(24489330-24489449)
chr3 (141-218)||(13356792-13356869)
chr3 (138-218)||(46220376-46220456)
chr3 (161-252)||(2544491-2544583)
chr3 (142-241)||(6061098-6061195)
chr3 (178-245)||(51980438-51980505)
chr3 (141-259)||(27363178-27363296)
chr3 (190-259)||(25313295-25313364)
chr3 (146-208)||(44664200-44664262)
chr3 (138-175)||(2544447-2544484)
chr3 (142-191)||(25313626-25313675)
chr3 (138-206)||(34269308-34269376)
chr3 (138-194)||(50660020-50660076)
chr3 (138-172)||(48643614-48643648)
chr3 (138-175)||(31376185-31376222)
chr3 (138-259)||(42896159-42896280)
chr3 (138-175)||(2544560-2544597)
chr3 (149-190)||(28406553-28406594)
chr3 (138-175)||(39616921-39616958)
chr3 (138-175)||(43901682-43901719)
chr3 (139-175)||(45113745-45113781)
[»] chr6 (21 HSPs)
chr6 (137-252)||(9343129-9343244)
chr6 (138-255)||(359566-359683)
chr6 (142-259)||(8264986-8265103)
chr6 (138-280)||(2913343-2913485)
chr6 (138-269)||(12217497-12217630)
chr6 (136-245)||(29284529-29284638)
chr6 (142-218)||(10145273-10145349)
chr6 (139-269)||(30438754-30438884)
chr6 (145-259)||(23916145-23916258)
chr6 (138-259)||(28605587-28605708)
chr6 (142-281)||(12605605-12605744)
chr6 (147-218)||(33127844-33127915)
chr6 (139-221)||(3847463-3847545)
chr6 (163-257)||(33128860-33128954)
chr6 (138-193)||(2913416-2913471)
chr6 (139-248)||(12240113-12240220)
chr6 (138-175)||(23916228-23916265)
chr6 (178-259)||(26484302-26484382)
chr6 (138-175)||(28605580-28605617)
chr6 (138-190)||(17598121-17598173)
chr6 (139-175)||(24986033-24986069)
[»] chr1 (29 HSPs)
chr1 (138-281)||(51590440-51590583)
chr1 (142-243)||(48565541-48565642)
chr1 (139-259)||(13321725-13321845)
chr1 (158-259)||(29438168-29438269)
chr1 (139-278)||(27687839-27687978)
chr1 (138-259)||(19998421-19998542)
chr1 (138-259)||(31050260-31050381)
chr1 (142-259)||(45977111-45977228)
chr1 (138-252)||(15699474-15699588)
chr1 (139-249)||(52279261-52279371)
chr1 (138-251)||(22182790-22182903)
chr1 (138-284)||(18038698-18038844)
chr1 (180-278)||(34174884-34174982)
chr1 (138-197)||(25238652-25238711)
chr1 (160-278)||(13770741-13770859)
chr1 (141-259)||(44224283-44224400)
chr1 (155-218)||(12175509-12175572)
chr1 (142-278)||(13320301-13320437)
chr1 (139-259)||(43850966-43851088)
chr1 (138-259)||(20486667-20486788)
chr1 (139-211)||(2543322-2543394)
chr1 (149-215)||(32837657-32837723)
chr1 (139-175)||(34174897-34174933)
chr1 (138-172)||(31050354-31050388)
chr1 (181-259)||(52030885-52030963)
chr1 (226-259)||(2855183-2855216)
chr1 (138-175)||(19998512-19998549)
chr1 (139-203)||(9552653-9552716)
chr1 (136-172)||(15699568-15699604)
[»] chr2 (30 HSPs)
chr2 (138-252)||(28143769-28143883)
chr2 (138-259)||(25795255-25795376)
chr2 (138-259)||(45076352-45076473)
chr2 (141-257)||(38448957-38449073)
chr2 (142-258)||(41464728-41464844)
chr2 (138-259)||(15239709-15239830)
chr2 (138-259)||(36103410-36103531)
chr2 (142-268)||(11687483-11687609)
chr2 (138-259)||(6971580-6971701)
chr2 (142-259)||(9373411-9373528)
chr2 (138-259)||(40534530-40534651)
chr2 (138-267)||(27311586-27311715)
chr2 (142-280)||(27306725-27306861)
chr2 (139-243)||(3365308-3365412)
chr2 (138-250)||(23464522-23464635)
chr2 (142-259)||(11724279-11724402)
chr2 (138-208)||(6971506-6971576)
chr2 (139-203)||(44283605-44283670)
chr2 (140-198)||(4755474-4755532)
chr2 (145-220)||(28248989-28249064)
chr2 (193-259)||(14329203-14329269)
chr2 (138-172)||(25795248-25795282)
chr2 (141-175)||(27311590-27311624)
chr2 (139-255)||(31853160-31853275)
chr2 (138-175)||(6971671-6971708)
chr2 (139-218)||(12873734-12873813)
chr2 (138-175)||(21424911-21424948)
chr2 (145-218)||(32457271-32457344)
chr2 (138-175)||(45076443-45076480)
chr2 (227-259)||(41464731-41464763)
[»] scaffold0767 (2 HSPs)
scaffold0767 (138-259)||(3819-3940)
scaffold0767 (141-175)||(3910-3944)
[»] scaffold0533 (2 HSPs)
scaffold0533 (138-259)||(3257-3378)
scaffold0533 (139-175)||(3251-3287)
[»] chr5 (31 HSPs)
chr5 (138-259)||(13932471-13932592)
chr5 (138-259)||(20502097-20502218)
chr5 (138-281)||(29451903-29452045)
chr5 (138-281)||(29874312-29874455)
chr5 (138-269)||(38978752-38978883)
chr5 (141-259)||(7537034-7537152)
chr5 (141-259)||(35204937-35205054)
chr5 (141-259)||(35212105-35212222)
chr5 (142-259)||(73801-73918)
chr5 (138-259)||(24173437-24173558)
chr5 (127-259)||(35318531-35318663)
chr5 (142-277)||(27600773-27600907)
chr5 (138-269)||(29002749-29002880)
chr5 (142-280)||(5355565-5355703)
chr5 (138-248)||(32455167-32455277)
chr5 (145-259)||(13278903-13279017)
chr5 (138-259)||(33247309-33247429)
chr5 (138-218)||(19211290-19211370)
chr5 (142-259)||(9630252-9630369)
chr5 (138-259)||(33970674-33970795)
chr5 (203-262)||(4527719-4527778)
chr5 (146-229)||(13128211-13128294)
chr5 (18-79)||(23286522-23286583)
chr5 (138-175)||(8680642-8680679)
chr5 (145-220)||(3814027-3814102)
chr5 (162-241)||(12442268-12442347)
chr5 (138-174)||(13932563-13932599)
chr5 (138-175)||(73794-73831)
chr5 (145-190)||(38394445-38394490)
chr5 (145-193)||(1138300-1138348)
chr5 (139-175)||(29002753-29002789)
[»] scaffold0110 (1 HSPs)
scaffold0110 (138-255)||(40212-40329)
[»] scaffold0027 (1 HSPs)
scaffold0027 (141-253)||(5437-5549)
[»] scaffold0200 (1 HSPs)
scaffold0200 (138-259)||(25631-25753)
[»] scaffold0059 (2 HSPs)
scaffold0059 (138-247)||(26615-26724)
scaffold0059 (138-175)||(26596-26633)
[»] scaffold0023 (2 HSPs)
scaffold0023 (138-259)||(112840-112961)
scaffold0023 (138-175)||(112833-112870)
[»] scaffold0287 (2 HSPs)
scaffold0287 (138-259)||(12756-12877)
scaffold0287 (138-259)||(12763-12884)
[»] scaffold0460 (2 HSPs)
scaffold0460 (138-259)||(12223-12344)
scaffold0460 (138-259)||(7656-7777)
[»] scaffold0015 (1 HSPs)
scaffold0015 (142-218)||(17399-17475)
[»] scaffold0474 (1 HSPs)
scaffold0474 (145-218)||(11767-11840)
[»] scaffold0176 (1 HSPs)
scaffold0176 (139-252)||(19308-19419)


Alignment Details
Target: chr8 (Bit Score: 90; Significance: 2e-43; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 43292578 - 43292699
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| || |||| ||||||| ||    
T  43292578 gtccttattataagaaacaattgacttttttggttcatagaataattaatgtatcttgttataaatatagactagatacatcacttacataatgaaccta 43292677  T
Q  238 aaaagtcaattgttttttataa 259  Q
    ||||||||| ||||| ||||||    
T  43292678 aaaagtcaaatgtttcttataa 43292699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 133 - 263
Target Start/End: Original strand, 9633086 - 9633216
Alignment:
Q  133 tttccgtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatga 232  Q
    |||| ||||||||||||||||||||||||| |||||| |||||   |||||||||||||||||||||||||||||||||||||||||   ||||||||||    
T  9633086 tttcggtccttattataagaaacaattgacgttttagattcattgtataattaatgtatcttgttataaatatagactagatacattgtttacacaatga 9633185  T
Q  233 acttaaaaagtcaattgttttttataagaag 263  Q
    |||||||||||||| ||||| ||||||||||    
T  9633186 acttaaaaagtcaaatgtttcttataagaag 9633216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 34745267 - 34745388
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| || |||| ||||||  ||    
T  34745267 gtccttattataagaaacaattgacttttttggttcatagaataattaatgtatcttgttataaatatagactagatacatcacttacataatgaatcta 34745366  T
Q  238 aaaagtcaattgttttttataa 259  Q
    |||| |||| ||||| ||||||    
T  34745367 aaaaatcaaatgtttcttataa 34745388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 38298632 - 38298518
Alignment:
Q  145 ttataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaagtc 244  Q
    ||||||||||||||||| |||||||||||||  |||||||||||||||| ||||||||||||| |||||||||| || ||||||||||||||||||||||    
T  38298632 ttataagaaacaattgattttttaggttcattgaataattaatgtatctcgttataaatataggctagatacatcacttacacaatgaacttaaaaagtc 38298533  T
Q  245 aattgttttttataa 259  Q
    |||| ||| ||||||    
T  38298532 aattatttcttataa 38298518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 138 - 280
Target Start/End: Complemental strand, 43932187 - 43932045
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||| ||||||||| |  |  ||||||||| ||    
T  43932187 gtccttattataagaaacaattgactttttagattcattgaataattaatgtatcttgttataaatatagattagatacatcatttgtacaatgaaccta 43932088  T
Q  238 aaaagtcaattgttttttataagaagaatcggttggagtatta 280  Q
    ||||||||||||||| |||||| ||| | |||  |||||||||    
T  43932087 aaaagtcaattgtttcttataataaggaccggagggagtatta 43932045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 29690446 - 29690567
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||| || |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| || || |||||||||  |    
T  29690446 gtccttattataagaaaaaactgactttttaggttcatagaataattaatgtatcttattataaatatagactagatacatcacttatacaatgaaccaa 29690545  T
Q  238 aaaagtcaattgttttttataa 259  Q
    |||||| |||||||| ||||||    
T  29690546 aaaagttaattgtttcttataa 29690567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 13832013 - 13831892
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||| || ||||||||||||| |||||| || || |||||||||  |    
T  13832013 gtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactatatacatcacttatacaatgaaccaa 13831914  T
Q  238 aaaagtcaattgttttttataa 259  Q
    |||||| |||||||| ||||||    
T  13831913 aaaagttaattgtttcttataa 13831892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 34604791 - 34604912
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||| | ||||||||||||||||||| ||||| ||||||||||| || |||||||||||||||||||| || || |||||||||  |    
T  34604791 gtccttattataagaaaaagttgactttttaggttcatagaataaataatgtatcttattgtaaatatagactagatacatcacttatacaatgaaccaa 34604890  T
Q  238 aaaagtcaattgttttttataa 259  Q
    |||| |||||||||| ||||||    
T  34604891 aaaaatcaattgtttcttataa 34604912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 138 - 249
Target Start/End: Complemental strand, 43409972 - 43409861
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||| || ||||| ||||||||| |||||||  ||||||||||||| || ||||||||||||||||||||||||||| || ||||||||| ||    
T  43409972 gtccttattattagcaacaaatgactttttcggttcattgaataattaatgtacctcgttataaatatagactagatacattacttatacaatgaaccta 43409873  T
Q  238 aaaagtcaattg 249  Q
    ||||||||||||    
T  43409872 aaaagtcaattg 43409861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 142 - 265
Target Start/End: Original strand, 38494253 - 38494376
Alignment:
Q  142 ttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaa 241  Q
    ||||||||||||| ||||||||||||  ||||||| ||||||||||||||||||||||||||||| | ||||||||  || |||||||| ||| ||||||    
T  38494253 ttattataagaaataattgactttttttgttcatagaataattaatgtatcttgttataaatataaattagatacaccacttacacaataaacctaaaaa 38494352  T
Q  242 gtcaattgttttttataagaagaa 265  Q
     |||||| ||| |||||| |||||    
T  38494353 atcaattttttcttataataagaa 38494376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 138 - 281
Target Start/End: Complemental strand, 44580031 - 44579888
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||| | ||||||||||| ||||||| ||||||||||||||||| || ||||||||||||||||| ||||| || ||||| ||   |    
T  44580031 gtccttattataagaaaaagttgactttttaagttcatagaataattaatgtatcttattgtaaatatagactagatatattacttatacaataaatcaa 44579932  T
Q  238 aaaagtcaattgttttttataagaagaatcggttggagtattat 281  Q
    |||||| |||||||| |||||| ||  |  ||||||||||||||    
T  44579931 aaaagttaattgtttcttataataaagactggttggagtattat 44579888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 173 - 259
Target Start/End: Complemental strand, 40645813 - 40645727
Alignment:
Q  173 cataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaagtcaattgttttttataa 259  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||| ||||| ||||||    
T  40645813 catagaataattaatgtatcttgttataaatatagactagatacatcacttacataatgaacttaaaaagtcaaatgtttcttataa 40645727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 35583893 - 35584014
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||| |  |||| ||||||||||||| ||||||||||||||||| || |||||||||| ||||||||| || || |||||||||  |    
T  35583893 gtccttattataagaaaaatatgaccttttaggttcatagaataattaatgtatcttattgtaaatatagattagatacatcacttatacaatgaaccaa 35583992  T
Q  238 aaaagtcaattgttttttataa 259  Q
    |||||| |||||||| ||||||    
T  35583993 aaaagttaattgtttcttataa 35584014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 138 - 251
Target Start/End: Original strand, 45372715 - 45372828
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||| ||||||||| | ||||||||||||||||||| ||||||||||||||||| ||  ||||||||||||||||||| || |||||| ||||   |    
T  45372715 gtccttaatataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgaaaatatagactagatacatcacttacacattgaatcaa 45372814  T
Q  238 aaaagtcaattgtt 251  Q
    ||||||||||||||    
T  45372815 aaaagtcaattgtt 45372828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 140 - 259
Target Start/End: Complemental strand, 9550245 - 9550126
Alignment:
Q  140 ccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaa 239  Q
    |||||||||||||||||||||||||||||  || ||  ||||| |||||||||| || ||||||||||||||||||||| || ||| ||||||| |||||    
T  9550245 ccttattataagaaacaattgactttttaaatttattgaataactaatgtatctcgtaataaatatagactagatacatcacttacccaatgaatttaaa 9550146  T
Q  240 aagtcaattgttttttataa 259  Q
    || |||||| ||| ||||||    
T  9550145 aaatcaattatttcttataa 9550126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 7548636 - 7548514
Alignment:
Q  138 gtccttattataagaaacaattgacttttt-aggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactt 236  Q
    ||||||||||||||||| | |||| ||||| ||||||||| ||||||||||| ||||| || ||||||||| ||| |||||| || ||||||||||||      
T  7548636 gtccttattataagaaaaagttgatttttttaggttcatagaataattaatgcatcttattgtaaatatagtctaaatacatcacttacacaatgaacca 7548537  T
Q  237 aaaaagtcaattgttttttataa 259  Q
    ||||| | |||||||| ||||||    
T  7548536 aaaaaattaattgtttcttataa 7548514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 35794664 - 35794544
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||||  || ||||||||| |||||  | ||||||||||||||||||||||| ||| | || ||||||||| || | ||| |||||     
T  35794664 gtccttattataagaaactttttactttttagattcattgagtaattaatgtatcttgttataaacataaattaaatacattacttatataatcaactt- 35794566  T
Q  238 aaaagtcaattgttttttataa 259  Q
    |||||||||  |||||||||||    
T  35794565 aaaagtcaaaagttttttataa 35794544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 200 - 259
Target Start/End: Original strand, 45180111 - 45180170
Alignment:
Q  200 aaatatagactagatacattacctacacaatgaacttaaaaagtcaattgttttttataa 259  Q
    ||||||||||||||||||| || ||||||||||||  |||||||||||||||||||||||    
T  45180111 aaatatagactagatacatcacttacacaatgaaccaaaaaagtcaattgttttttataa 45180170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 5356803 - 5356908
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||||||||| ||||||||||||||||| |||||   |||||||| | |||| ||||||||||| || ||||||||| || || ||||| ||  ||    
T  5356803 gtccttattataagcaacaattgactttttagattcattggataattaacgcatctcgttataaatatggattagatacatcacttatacaataaatcta 5356902  T
Q  238 aaaagt 243  Q
    ||||||    
T  5356903 aaaagt 5356908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 249
Target Start/End: Complemental strand, 9420685 - 9420614
Alignment:
Q  178 aataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaagtcaattg 249  Q
    ||||||||||||| || ||||||||||||||| ||||||||||| || ||||||||  ||||| ||||||||    
T  9420685 aataattaatgtacctcgttataaatatagaccagatacattacttatacaatgaatctaaaacgtcaattg 9420614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 257
Target Start/End: Original strand, 24599683 - 24599798
Alignment:
Q  142 ttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaa 241  Q
    ||||||||||||| |||||||||||||  |||||  ||||| |||||||| |  ||||||||||||  ||||||||| |  || ||||||||  ||||||    
T  24599683 ttattataagaaataattgactttttaaattcattgaataaataatgtatttcattataaatataggttagatacatcagttatacaatgaatctaaaaa 24599782  T
Q  242 gtcaattgttttttat 257  Q
     |||||||||| ||||    
T  24599783 atcaattgtttcttat 24599798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 43932059 - 43932096
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcat 175  Q
    ||||||||||||||||||||||||||||||||||||||    
T  43932059 gtccttattataagaaacaattgactttttaggttcat 43932096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 259
Target Start/End: Complemental strand, 41624850 - 41624755
Alignment:
Q  164 ttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaagtcaattgttttttataa 259  Q
    ||||||||| ||  ||||||||| |||| ||||||||||||||||||| |||||| || || | || |||| ||||||||||  ||||| ||||||    
T  41624850 ttttaggttgattgaataattaacgtatgttgttataaatatagactaaatacatcacttatataaggaacctaaaaagtcatatgtttcttataa 41624755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 43292706 - 43292585
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgt-tataaatatagactagatacattacctacacaatgaactt 236  Q
    ||||||||||||||||||| |||||||||||||||||| |  ||| | |||||||| || ||||  |||| || ||||||||||  ||  | ||||||      
T  43292706 gtccttattataagaaacatttgactttttaggttcattatgtaagtgatgtatctagtctatatttata-acaagatacattaattattctatgaacca 43292608  T
Q  237 aaaaagtcaattgttttttataa 259  Q
    |||||||||||||||| ||||||    
T  43292607 aaaaagtcaattgtttcttataa 43292585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 259
Target Start/End: Complemental strand, 9633230 - 9633098
Alignment:
Q  127 tacttctttccgtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgt-tataaatatagactagatacattacctac 225  Q
    |||||||||| |||||| |||||||||||| ||||||||||| ||||||    |||  ||||||||| || ||||  |||| || ||||||||||  ||     
T  9633230 tacttctttcggtccttcttataagaaacatttgactttttaagttcattgtgtaaacaatgtatctagtctatatttata-acaagatacattaattat 9633132  T
Q  226 acaatgaacttaaaaagtcaattgttttttataa 259  Q
    ||||||||  ||||| ||||||||||| ||||||    
T  9633131 acaatgaatctaaaacgtcaattgtttcttataa 9633098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 14547873 - 14547794
Alignment:
Q  162 ctttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaa 241  Q
    |||||||||||||| |||||||||||||||||  ||   ||| ||||| ||||| |||| |||| |||||||| ||||||    
T  14547873 ctttttaggttcattaaataattaatgtatctgctttacaatgtagaccagatagattaactactcaatgaacctaaaaa 14547794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 43409844 - 43409899
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatct 193  Q
    |||||||||||||| | |||||||||||||||||||||   |||| ||||||||||    
T  43409844 gtccttattataagcagcaattgactttttaggttcattgtataagtaatgtatct 43409899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 7693164 - 7693091
Alignment:
Q  145 ttataagaaacaattgactttttaggttcataaaataattaatgtatcttgttat-aaatatagactagatacat 218  Q
    |||||||||| |||||||||||||| |||||  | |||||||||||| ||| ||| |||||||||||| ||||||    
T  7693164 ttataagaaaaaattgactttttagattcattgagtaattaatgtat-ttggtataaaatatagactaaatacat 7693091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 10839780 - 10839853
Alignment:
Q  145 ttataagaaacaattgactttttaggttcataaaataattaatgtatcttgttata-aatatagactagatacat 218  Q
    |||||||||| |||||||||||||| |||||  ||||||||||||| |||| |||| ||||||||| | ||||||    
T  10839780 ttataagaaaaaattgactttttagattcattgaataattaatgta-cttggtatagaatatagaccaaatacat 10839853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 27988190 - 27988108
Alignment:
Q  161 actttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaagt 243  Q
    ||||||||| |||||  |||||||||||||| | |||| |  |||| || ||||||||||| ||  |||||||||||||||||    
T  27988190 actttttagattcattgaataattaatgtatttagttaaatttataaacgagatacattacttattcaatgaacttaaaaagt 27988108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 28045492 - 28045410
Alignment:
Q  161 actttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaagt 243  Q
    ||||||||| |||||  |||||||||||||| | |||| |  |||| || ||||||||||| ||  |||||||||||||||||    
T  28045492 actttttagattcattgaataattaatgtatttagttaaatttataaacgagatacattacttattcaatgaacttaaaaagt 28045410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 29690591 - 29690537
Alignment:
Q  121 atattctacttctttccgtccttattataagaaacaattgactttttaggttcat 175  Q
    ||||| |||||| | | |||||||||||||||||||||| ||||||| |||||||    
T  29690591 atattttacttcctccggtccttattataagaaacaattaacttttttggttcat 29690537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 1223140 - 1223213
Alignment:
Q  145 ttataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacat 218  Q
    |||||||||| || ||||||||||| |||||    ||||||||||||||||| | |||||||||| | ||||||    
T  1223140 ttataagaaaaaagtgactttttagattcattgtgtaattaatgtatcttgtcaaaaatatagaccaaatacat 1223213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 13831885 - 13831922
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcat 175  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  13831885 gtccttattataagaaacaattaacttttttggttcat 13831922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Complemental strand, 34604919 - 34604882
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcat 175  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  34604919 gtccttattataagaaacaattgatttttttggttcat 34604882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Complemental strand, 35584021 - 35583984
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcat 175  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  35584021 gtccttattataagaaacaattaacttttttggttcat 35583984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 40645720 - 40645757
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcat 175  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  40645720 gtccttattataagaaacatttgactttttaagttcat 40645757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 1e-41; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 138 - 280
Target Start/End: Original strand, 24164526 - 24164668
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||| || |||| ||||||| ||    
T  24164526 gtccttattataagaaacaattgatttttttggttcatagaataattaatgtatcttgttagaaatatagactagatacatcacttacataatgaaccta 24164625  T
Q  238 aaaagtcaattgttttttataagaagaatcggttggagtatta 280  Q
    ||||||||| ||||| |||||| ||| |||||  |||||||||    
T  24164626 aaaagtcaaatgtttcttataataaggatcggagggagtatta 24164668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 138 - 269
Target Start/End: Complemental strand, 29559575 - 29559444
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||||| ||||||||||||||||||||| |||||  |||||||||||||| | ||||||||||||||||||||||||||| ||||| |||||| ||    
T  29559575 gtccttattacaagaaacaattgactttttagattcattgaataattaatgtatttcgttataaatatagactagatacattacttacacgatgaaccta 29559476  T
Q  238 aaaagtcaattgttttttataagaagaatcgg 269  Q
    ||||||||||||||| |||||| ||| |||||    
T  29559475 aaaagtcaattgtttcttataataaggatcgg 29559444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 41088862 - 41088983
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||||| ||||||||||||||||||||| |||||  |||||||||||||| | ||||||||||||||||||||||||||| ||||| || ||| ||    
T  41088862 gtccttattacaagaaacaattgactttttagattcattgaataattaatgtatttcgttataaatatagactagatacattacttacacgattaaccta 41088961  T
Q  238 aaaagtcaattgttttttataa 259  Q
    ||||||||||||||| ||||||    
T  41088962 aaaagtcaattgtttcttataa 41088983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 41487801 - 41487922
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| || ||||||||||||  |    
T  41487801 gtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatacatcacttacacaatgaaccaa 41487900  T
Q  238 aaaagtcaattgttttttataa 259  Q
    |||| |||||||||| ||||||    
T  41487901 aaaaatcaattgtttcttataa 41487922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 45025604 - 45025725
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| || |||| ||||||  ||    
T  45025604 gtccttattataagaaacaattgatttttttggttcatagaataattaatgtatcttgttataaatatagactagatacatcacttacataatgaatcta 45025703  T
Q  238 aaaagtcaattgttttttataa 259  Q
    |||| |||| ||||| ||||||    
T  45025704 aaaaatcaaatgtttcttataa 45025725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 141 - 269
Target Start/End: Original strand, 10674136 - 10674264
Alignment:
Q  141 cttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaa 240  Q
    |||||||||| ||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||| || |||| ||||||  |||||    
T  10674136 cttattataaaaaacatttgactttttaggttcattgaataattaatgtatcttgttataaatatagattagatacatcacttacataatgaatctaaaa 10674235  T
Q  241 agtcaattgttttttataagaagaatcgg 269  Q
    |||||||||||| |||||| ||| |||||    
T  10674236 agtcaattgtttcttataataaggatcgg 10674264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 138 - 249
Target Start/End: Original strand, 47612300 - 47612411
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||| || ||||| |||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||| || ||||||||| ||    
T  47612300 gtccttattattagcaacaaatgactttttaggttcattgaataattaatgtatctcgttataaatatagactagatacattacttatacaatgaaccta 47612399  T
Q  238 aaaagtcaattg 249  Q
    ||||||||||||    
T  47612400 aaaagtcaattg 47612411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 127 - 278
Target Start/End: Complemental strand, 41395811 - 41395660
Alignment:
Q  127 tacttctttccgtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctaca 226  Q
    |||||| ||| || |||||||||||||| | |||||||||||| |||||| |||||||||| |||||| ||||||||||||||||||||||| || || |    
T  41395811 tacttccttcggttcttattataagaaaaagttgactttttagattcatagaataattaatatatcttattataaatatagactagatacatcacttata 41395712  T
Q  227 caatgaacttaaaaagtcaattgttttttataagaagaatcggttggagtat 278  Q
    ||||||| | ||||||| |||||||| |||||| ||| |||||  |||||||    
T  41395711 caatgaattaaaaaagttaattgtttcttataataaggatcggaaggagtat 41395660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 33901048 - 33901169
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||||||||||||||||||| ||||| | |||||| |||| |||||||||||||||||||||||||||||||||||| |  |||| ||||||  ||    
T  33901048 gtccttattataagaaacaattgatttttttgattcatagaatagttaatgtatcttgttataaatatagactagatacatcatttacataatgaatcta 33901147  T
Q  238 aaaagtcaattgttttttataa 259  Q
    ||||||||| ||||| ||||||    
T  33901148 aaaagtcaaatgtttcttataa 33901169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 139 - 259
Target Start/End: Complemental strand, 13860354 - 13860235
Alignment:
Q  139 tccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaa 238  Q
    ||||||||||||||||||||||||||||||| |||||   ||||||||||||| |||||||||||||||||||||||||| |  |||||||| |||||||    
T  13860354 tccttattataagaaacaattgactttttagattcattgtataattaatgtatattgttataaatatagactagatacatca-ttacacaataaacttaa 13860256  T
Q  239 aaagtcaattgttttttataa 259  Q
    ||||| || ||||| ||||||    
T  13860255 aaagtaaaatgtttcttataa 13860235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 139 - 259
Target Start/End: Original strand, 22618174 - 22618294
Alignment:
Q  139 tccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaa 238  Q
    ||||||||||||||||   |||| ||||||| |||||  | |||||||||||||||||| |||||||||||||||||||| || |||||||||||| |||    
T  22618174 tccttattataagaaatttttgattttttagattcattgagtaattaatgtatcttgttgtaaatatagactagatacatcacttacacaatgaacctaa 22618273  T
Q  239 aaagtcaattgttttttataa 259  Q
    |||||||||||||| ||||||    
T  22618274 aaagtcaattgtttcttataa 22618294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 136 - 259
Target Start/End: Original strand, 27320302 - 27320425
Alignment:
Q  136 ccgtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaact 235  Q
    ||||||||||||||||||| | ||||||||||| ||||||||||||||| || |||||| || ||||||||||||||| ||||||| || |||||||||     
T  27320302 ccgtccttattataagaaaaagttgactttttaagttcataaaataattgatatatcttattgtaaatatagactagaaacattacttatacaatgaacc 27320401  T
Q  236 taaaaagtcaattgttttttataa 259  Q
     ||||| |||||||||| ||||||    
T  27320402 aaaaaaatcaattgtttcttataa 27320425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 40198614 - 40198735
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||| | ||||||||||||||||||| ||||||||||| |||||||| ||||||||||||| ||||||  | |||| ||| |||| |    
T  40198614 gtccttattataagaaaaagttgactttttaggttcatagaataattaatgcatcttgttgtaaatatagactaaatacatcgcttacataataaactaa 40198713  T
Q  238 aaaagtcaattgttttttataa 259  Q
    |||||||| |||||| ||||||    
T  40198714 aaaagtcatttgtttcttataa 40198735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 47484159 - 47484038
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||||||||| || | ||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| || ||| |||||||   |    
T  47484159 gtccttattataagtaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatacatcacttacgcaatgaataaa 47484060  T
Q  238 aaaagtcaattgttttttataa 259  Q
    |||| |||||||||| ||||||    
T  47484059 aaaaatcaattgtttcttataa 47484038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 138 - 228
Target Start/End: Original strand, 12806918 - 12807008
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacaca 228  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||| || ||||||    
T  12806918 gtccttattataagaaaaagttgactttttaggttcataaaataattaatgtatcttattgtaaatatagactacatacatcacttacaca 12807008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 139 - 252
Target Start/End: Complemental strand, 33039699 - 33039584
Alignment:
Q  139 tccttattataagaaacaattgactttttaggttcataaa--ataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactt 236  Q
    |||||||| |||| |||||||||||||||||||| ||| |  |||||||||||||| |||| ||||||||||||||||||||  |  ||||||||||| |    
T  33039699 tccttattttaaggaacaattgactttttaggtttatatagaataattaatgtatcatgttgtaaatatagactagatacatccctaacacaatgaacct 33039600  T
Q  237 aaaaagtcaattgttt 252  Q
    ||||||||||||||||    
T  33039599 aaaaagtcaattgttt 33039584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 155 - 234
Target Start/End: Complemental strand, 7999569 - 7999490
Alignment:
Q  155 caattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaac 234  Q
    ||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||| || ||||||||||||    
T  7999569 caattgactttttaggttcattaaataattaatgcatctcgttataaatatagactagatacatcacttacacaatgaac 7999490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 31903087 - 31902961
Alignment:
Q  139 tccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaa 238  Q
    |||||||||||| ||| |||| | |||||||||||||  |||||||||||||| | || ||||||||||||||||||||| |  |||| ||| |||||||    
T  31903087 tccttattataaaaaataattaattttttaggttcattgaataattaatgtatttcgtcataaatatagactagatacatcatttacataataaacttaa 31902988  T
Q  239 aaagtcaattgttttttataagaagaa 265  Q
    ||||||| |||||| |||||| |||||    
T  31902987 aaagtcagttgtttcttataataagaa 31902961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 37006595 - 37006473
Alignment:
Q  138 gtccttattataagaaacaa-ttgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactt 236  Q
    ||||||||||||||||| || ||||||||||| ||||||| ||||||||||||||| | || |||||||| ||| ||||||| || || ||||| ||||     
T  37006595 gtccttattataagaaaaaaattgactttttaagttcatagaataattaatgtatcatattgtaaatataaactggatacatcacttatacaataaacta 37006496  T
Q  237 aaaaagtcaattgttttttataa 259  Q
    |||||||||||||||| ||||||    
T  37006495 aaaaagtcaattgtttcttataa 37006473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 279
Target Start/End: Original strand, 18064732 - 18064873
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||| ||||||||| | || |||||||| ||||||| ||||||||||||||||| ||  ||||||||||||||||||| || || |||||||||| |    
T  18064732 gtccttaatataagaaaaagttaactttttaagttcatagaataattaatgtatcttattgaaaatatagactagatacatcacttaaacaatgaactaa 18064831  T
Q  238 aaaagtcaattgttttttataagaagaatcggttggagtatt 279  Q
    ||| ||||| ||||| |||||  ||| | ||| |||||||||    
T  18064832 aaatgtcaactgtttcttatattaaggaccggatggagtatt 18064873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 252
Target Start/End: Original strand, 28248441 - 28248559
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacac----aatgaa 233  Q
    ||||||||||||||||||||||||| |||||| |||||  ||||||||||| |||| ||||||||||||||||| |||||| || |||||    ||||||    
T  28248441 gtccttattataagaaacaattgacattttagattcattgaataattaatgcatctcgttataaatatagactatatacatcacttacacaattaatgaa 28248540  T
Q  234 cttaaaaagtcaattgttt 252  Q
    | |||||||| ||||||||    
T  28248541 cctaaaaagttaattgttt 28248559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 142 - 268
Target Start/End: Original strand, 14543282 - 14543408
Alignment:
Q  142 ttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaa 241  Q
    ||||||||||||||  |||| ||||||| |||||  | |||||||||||||||| | |||||||||||||||||||| || |||| ||| |||||||| |    
T  14543282 ttattataagaaacttttgattttttagattcattgagtaattaatgtatcttgatgtaaatatagactagatacatcacttacataataaacttaaaca 14543381  T
Q  242 gtcaattgttttttataagaagaatcg 268  Q
     |||||||||| |||||| ||| ||||    
T  14543382 atcaattgtttcttataataaggatcg 14543408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 3633329 - 3633208
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||| | ||||||||||||||||||    ||| | |||||||| ||||||||| |||||||||||||| || || | ||||||| ||    
T  3633329 gtccttattataagaaatatttgactttttaggttcattgtttaagtgatgtatctcgttataaatgtagactagatacatcacttaaataatgaaccta 3633230  T
Q  238 aaaagtcaattgttttttataa 259  Q
    ||||||||| ||||| ||||||    
T  3633229 aaaagtcaaatgtttcttataa 3633208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 158 - 259
Target Start/End: Complemental strand, 47280291 - 47280191
Alignment:
Q  158 ttgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaagtcaattgttttttat 257  Q
    ||||||||||||||||||| ||||||||||||||||| || ||||||||||||| ||||||||  || |||||||||  ||||||| |||||||| ||||    
T  47280291 ttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactaaatacattatttatacaatgaac-aaaaaagttaattgtttcttat 47280193  T
Q  258 aa 259  Q
    ||    
T  47280192 aa 47280191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 265
Target Start/End: Complemental strand, 40234862 - 40234777
Alignment:
Q  180 taattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaagtcaattgttttttataagaagaa 265  Q
    ||||| |||||||||||| |||||||||||||||||||| |  |||||||||||  ||||||||||||||||| |||||| |||||    
T  40234862 taattcatgtatcttgttgtaaatatagactagatacatcagttacacaatgaatctaaaaagtcaattgtttcttataataagaa 40234777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 45123255 - 45123376
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||| ||||| ||| | |||||||||||  |||||| ||||||||||||||||| ||||||||||||| ||||||||| || || ||||||||   |    
T  45123255 gtccttactataaaaaaaagttgactttttaaattcatagaataattaatgtatcttattataaatatagattagatacatcacttatacaatgaatcaa 45123354  T
Q  238 aaaagtcaattgttttttataa 259  Q
    |||||| |||| ||| ||||||    
T  45123355 aaaagttaattatttcttataa 45123376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 212
Target Start/End: Original strand, 48948952 - 48949028
Alignment:
Q  138 gtccttattataagaaacaattgact--ttttaggttcataaaataattaatgtatcttgttataaatatagactag 212  Q
    ||||||||||||||||| |||| |||  |||| |||||||| |||||||||||||||||||||||||||||||||||    
T  48948952 gtccttattataagaaataattaactcttttttggttcatagaataattaatgtatcttgttataaatatagactag 48949028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 24932382 - 24932446
Alignment:
Q  127 tacttctttccgtccttattataagaaacaattgactttttaggttcataaaataattaatgtat 191  Q
    |||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  24932382 tacttccttcggtccttattataagaaaaaattgactttttaggttcatagaataattaatgtat 24932446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 259
Target Start/End: Original strand, 39413857 - 39413959
Alignment:
Q  157 attgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaagtcaattgtttttta 256  Q
    ||||||||||||  || ||  ||||||||||||||| |||| ||||||| || ||||||||| || || |||||||||||||||| |||||||||| |||    
T  39413857 attgactttttatattaattgaataattaatgtatcatgttgtaaatattgattagatacatcacttatacaatgaacttaaaaaatcaattgtttctta 39413956  T
Q  257 taa 259  Q
    |||    
T  39413957 taa 39413959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 259
Target Start/End: Complemental strand, 7456537 - 7456436
Alignment:
Q  158 ttgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaagtcaattgttttttat 257  Q
    |||||||||||| |||||  | |||||||||||||||||| |||||||||||||||||||| |  || ||||||||  ||||||||||| | ||| ||||    
T  7456537 ttgactttttagattcattgagtaattaatgtatcttgttgtaaatatagactagatacatcatttatacaatgaatctaaaaagtcaaatatttcttat 7456438  T
Q  258 aa 259  Q
    ||    
T  7456437 aa 7456436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 45533247 - 45533361
Alignment:
Q  145 ttataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaagtc 244  Q
    |||||||||| |||||||||||||| ||||| |  |||||||||||||||||    ||||||||| | ||||||||  || |||||||| | ||||||||    
T  45533247 ttataagaaaaaattgactttttagattcattatgtaattaatgtatcttgtctagaatatagaccaaatacattatttatacaatgaattaaaaaagtc 45533346  T
Q  245 aattgttttttataa 259  Q
    || ||||| ||||||    
T  45533347 aaatgtttcttataa 45533361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 146 - 259
Target Start/End: Complemental strand, 29835214 - 29835102
Alignment:
Q  146 tataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaagtca 245  Q
    |||||||||| ||| ||||||||| |||||  |||||||||| ||||| ||| |||||||| | ||||||||| |  |||||||| ||  ||||||||||    
T  29835214 tataagaaactattaactttttagattcattgaataattaatatatctcgttgtaaatataaattagatacatcatttacacaataaatctaaaaagtca 29835115  T
Q  246 attgttttttataa 259  Q
    ||| ||||||||||    
T  29835114 att-ttttttataa 29835102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 259
Target Start/End: Complemental strand, 10674260 - 10674140
Alignment:
Q  139 tccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgt-tataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||||||||||||||||| ||||| |  ||| | ||||||||  | ||||  |||| || ||||||||||  ||  |||||||| ||    
T  10674260 tccttattataagaaacaattgactttttagattcattatgtaagtgatgtatctaatctatatttata-acaagatacattaattattcaatgaaccta 10674162  T
Q  238 aaaagtcaattgttttttataa 259  Q
    ||||||||| ||||||||||||    
T  10674161 aaaagtcaaatgttttttataa 10674140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 175
Target Start/End: Complemental strand, 22618301 - 22618264
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcat 175  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22618301 gtccttattataagaaacaattgactttttaggttcat 22618264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 139 - 175
Target Start/End: Original strand, 29559448 - 29559484
Alignment:
Q  139 tccttattataagaaacaattgactttttaggttcat 175  Q
    |||||||||||||||||||||||||||||||||||||    
T  29559448 tccttattataagaaacaattgactttttaggttcat 29559484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 206
Target Start/End: Original strand, 40599936 - 40600000
Alignment:
Q  142 ttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatata 206  Q
    |||||||||  ||||||||||||||||| ||||  ||||||||||||||| | ||||||||||||    
T  40599936 ttattataaacaacaattgactttttagattcaataaataattaatgtatttcgttataaatata 40600000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 3633201 - 3633322
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgt-tataaatatagactagatacattacctacacaatgaactt 236  Q
    ||||||||||||||||||| |||||||||||||||||| |  ||| | |||||||| || || |  |||| || |||||||| || || ||||||||| |    
T  3633201 gtccttattataagaaacatttgactttttaggttcattatttaagtgatgtatctagtctacatttata-acgagatacatcacttaaacaatgaacct 3633299  T
Q  237 aaaaagtcaattgttttttataa 259  Q
    |||||||||| | ||| ||||||    
T  3633300 aaaaagtcaaatatttcttataa 3633322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 172
Target Start/End: Complemental strand, 41088990 - 41088956
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggtt 172  Q
    |||||||||||||||||||||||||||||||||||    
T  41088990 gtccttattataagaaacaattgactttttaggtt 41088956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 251
Target Start/End: Complemental strand, 47612428 - 47612315
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgt-tataaatatagactagatacattacctacacaatgaactt 236  Q
    |||||||||||||| | |||||||||||||||||||||   |||| |||||||||| || ||||  |||| || ||||||||||  ||  |||||||| |    
T  47612428 gtccttattataagcagcaattgactttttaggttcattgtataagtaatgtatctagtctatatttata-acgagatacattaattattcaatgaacct 47612330  T
Q  237 aaaaagtcaattgtt 251  Q
    ||||||||| |||||    
T  47612329 aaaaagtcatttgtt 47612315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 175
Target Start/End: Complemental strand, 24164653 - 24164617
Alignment:
Q  139 tccttattataagaaacaattgactttttaggttcat 175  Q
    |||||||||||||||||| ||||||||||||||||||    
T  24164653 tccttattataagaaacatttgactttttaggttcat 24164617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 175
Target Start/End: Original strand, 33039572 - 33039607
Alignment:
Q  140 ccttattataagaaacaattgactttttaggttcat 175  Q
    |||||||| |||||||||||||||||||||||||||    
T  33039572 ccttattaaaagaaacaattgactttttaggttcat 33039607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 175
Target Start/End: Original strand, 40234779 - 40234813
Alignment:
Q  141 cttattataagaaacaattgactttttaggttcat 175  Q
    ||||||||||||||||||||||||||||| |||||    
T  40234779 cttattataagaaacaattgactttttagattcat 40234813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Complemental strand, 27320432 - 27320395
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcat 175  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  27320432 gtccttattataagaaacaattgatttttttggttcat 27320395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Complemental strand, 41487929 - 41487892
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcat 175  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  41487929 gtccttattataagaaacaattgatttttttggttcat 41487892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 167
Target Start/End: Original strand, 19372737 - 19372765
Alignment:
Q  139 tccttattataagaaacaattgacttttt 167  Q
    |||||||||||||||||||||||||||||    
T  19372737 tccttattataagaaacaattgacttttt 19372765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 28936065 - 28936117
Alignment:
Q  139 tccttattataagaaacaattgactttttaggttcataaaataattaatgtat 191  Q
    |||||||||| | |||||||||||||||||| || ||  ||||||||||||||    
T  28936065 tccttattattaaaaacaattgactttttagatttattgaataattaatgtat 28936117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 259
Target Start/End: Original strand, 41863664 - 41863712
Alignment:
Q  211 agatacattacctacacaatgaacttaaaaagtcaattgttttttataa 259  Q
    ||||||||||  ||||||||||| |||||||||||||| ||| ||||||    
T  41863664 agatacattaattacacaatgaatttaaaaagtcaattttttcttataa 41863712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 4e-41; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 52966533 - 52966412
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||| || || ||||||||||||    
T  52966533 gtccttattataagaaacaattgacttttttggttcatagaataattaatgcatcttgttataaatatagactagatacatcacttatacaatgaactta 52966434  T
Q  238 aaaagtcaattgttttttataa 259  Q
    ||||||||| | ||| ||||||    
T  52966433 aaaagtcaaatttttcttataa 52966412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 52136837 - 52136716
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||||||||||||||||||| |||||  ||||||| |||||||||||||||||||||||||||||||||| |||||| || |||||||||||| ||    
T  52136837 gtccttattataagaaacaattgatttttttagttcatagaataattaatgtatcttgttataaatatagactaaatacatcacttacacaatgaaccta 52136738  T
Q  238 aaaagtcaattgttttttataa 259  Q
    |||||| |||| ||| ||||||    
T  52136737 aaaagttaattttttcttataa 52136716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 54673320 - 54673441
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||||| ||||||||||||||||||  ||||| ||||| |||| |||||||||||||||||||||||| || |||| ||||||| ||    
T  54673320 gtccttattataagaaacatttgactttttaggttcattgaataagtaatgcatctcgttataaatatagactagatacatcacttacataatgaaccta 54673419  T
Q  238 aaaagtcaattgttttttataa 259  Q
    ||||||||||||||| ||||||    
T  54673420 aaaagtcaattgtttcttataa 54673441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 25756850 - 25756729
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||||||||||||||||| ||||||   ||||||||||||||| |||||||||| ||||||||||||| || |||||| ||||| ||    
T  25756850 gtccttattataagaaacaattgactttttatgttcattggataattaatgtatctcgttataaatagagactagatacatcacttacacagtgaaccta 25756751  T
Q  238 aaaagtcaattgttttttataa 259  Q
    ||||||||||| ||| ||||||    
T  25756750 aaaagtcaattatttcttataa 25756729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 54864074 - 54864195
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| || || |||||||||  |    
T  54864074 gtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatacatcacttatacaatgaaccaa 54864173  T
Q  238 aaaagtcaattgttttttataa 259  Q
    |||||| |||||||| ||||||    
T  54864174 aaaagttaattgtttcttataa 54864195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 138 - 249
Target Start/End: Complemental strand, 56491210 - 56491099
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||||||||| ||||| |||||||||| ||||||  ||||||||||||| || ||||||||||||||||||||||||||| || ||||||||| ||    
T  56491210 gtccttattataagcaacaaatgactttttaagttcattgaataattaatgtacctcgttataaatatagactagatacattacttatacaatgaaccta 56491111  T
Q  238 aaaagtcaattg 249  Q
    ||||||||||||    
T  56491110 aaaagtcaattg 56491099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 4418107 - 4418228
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||||||||||||||||||| |||||  ||||||| |||||||||||||| |||||||||||||| |||| |||||| || |||||||||||| ||    
T  4418107 gtccttattataagaaacaattgatttttttagttcatagaataattaatgtattttgttataaatataaactaaatacatcacttacacaatgaaccta 4418206  T
Q  238 aaaagtcaattgttttttataa 259  Q
    |||| |||||| ||| ||||||    
T  4418207 aaaaatcaattttttcttataa 4418228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 142 - 259
Target Start/End: Original strand, 31853081 - 31853198
Alignment:
Q  142 ttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaa 241  Q
    ||||||||||||| |||||| |||||   |||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||    
T  31853081 ttattataagaaataattgatttttttaattcatagaataattaatgtatcttgttataaatatagactagatacatcacttacacaatgaacctaaaaa 31853180  T
Q  242 gtcaattgttttttataa 259  Q
    ||||| | ||| ||||||    
T  31853181 gtcaaatttttcttataa 31853198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 143 - 259
Target Start/End: Complemental strand, 33623013 - 33622897
Alignment:
Q  143 tattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaag 242  Q
    |||||||||||| ||||||||||||| ||||||| ||||||||||||||||| || |||||||| ||||||||||| ||||| |||||||||  ||||||    
T  33623013 tattataagaaaaaattgactttttacgttcatagaataattaatgtatcttattgtaaatataaactagatacatcacctatacaatgaaccaaaaaag 33622914  T
Q  243 tcaattgttttttataa 259  Q
    | |||||||| ||||||    
T  33622913 ttaattgtttcttataa 33622897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 138 - 277
Target Start/End: Original strand, 35877324 - 35877463
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||| | |||||||||||| |||||| ||||||||||||||||| || ||||||||| ||| |||||| || ||||||||||||  |    
T  35877324 gtccttattataagaaaaagttgactttttagattcatagaataattaatgtatcttattgtaaatatagtctaaatacatcacttacacaatgaaccaa 35877423  T
Q  238 aaaagtcaattgttttttataagaagaatcggttggagta 277  Q
    |||| | |||||||| |||||| ||| |||||| ||||||    
T  35877424 aaaaattaattgtttcttataataaggatcggtgggagta 35877463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 138 - 280
Target Start/End: Complemental strand, 29686538 - 29686396
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||||||||||||||||| | ||||||  |||||   ||||||||||||| |||||||||||||||||||||||||| |  |||||||||||| ||    
T  29686538 gtccttattataagaaacaattaattttttaaattcattgtataattaatgtatattgttataaatatagactagatacatcatttacacaatgaaccta 29686439  T
Q  238 aaaagtcaattgttttttataagaagaatcggttggagtatta 280  Q
    ||||||||| ||||| |||||| ||| | |||  |||||||||    
T  29686438 aaaagtcaaatgtttcttataataaggaccggagggagtatta 29686396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 32193613 - 32193492
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||||||||||||   |||| |||||| ||||||| ||||||||||||| ||| ||| |||||||||||||||||||||| |||| |||||||  |    
T  32193613 gtccttattataagaaaacgttgattttttaagttcatagaataattaatgtaccttattagaaatatagactagatacattacttacataatgaaccaa 32193514  T
Q  238 aaaagtcaattgttttttataa 259  Q
    ||||||||||||||| ||||||    
T  32193513 aaaagtcaattgtttcttataa 32193492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 33615789 - 33615910
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||||  |||| ||||||| |||||  | ||||||||||||||| || |||||||||||||||||||| || |||||||||||  ||    
T  33615789 gtccttattataagaaacttttgattttttagattcattgagtaattaatgtatcttattgtaaatatagactagatacatcacttacacaatgaatcta 33615888  T
Q  238 aaaagtcaattgttttttataa 259  Q
    |||| |||||||||||||||||    
T  33615889 aaaattcaattgttttttataa 33615910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 42159983 - 42160104
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||| |||||| |||||  ||||||| |||||||||||||||||||||||||||||||||| |||||| || |||| |||||   ||    
T  42159983 gtccttattataagaaataattgattttttttgttcatagaataattaatgtatcttgttataaatatagactaaatacatcacttacataatgattcta 42160082  T
Q  238 aaaagtcaattgttttttataa 259  Q
    ||||||||| ||||| ||||||    
T  42160083 aaaagtcaaatgtttcttataa 42160104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 142 - 259
Target Start/End: Complemental strand, 43141900 - 43141783
Alignment:
Q  142 ttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaa 241  Q
    ||||||||||||| | ||||||||||||||||||| ||||||||||||||||| || |||||||||| ||||||||| || || |||||||||  |||||    
T  43141900 ttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagattagatacatcacttatacaatgaaccaaaaaa 43141801  T
Q  242 gtcaattgttttttataa 259  Q
    || |||||||| ||||||    
T  43141800 gttaattgtttcttataa 43141783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 136 - 259
Target Start/End: Original strand, 35929018 - 35929140
Alignment:
Q  136 ccgtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaact 235  Q
    ||||| ||||||||||||| | |||| |||||||||| ||| ||||||||||||||||| ||||||||||||| ||||||||| || ||||||||||||     
T  35929018 ccgtctttattataagaaaaagttgattttttaggtttatagaataattaatgtatcttattataaatatagattagatacatcacttacacaatgaac- 35929116  T
Q  236 taaaaagtcaattgttttttataa 259  Q
     ||||| |||||||||| ||||||    
T  35929117 caaaaaatcaattgtttcttataa 35929140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 138 - 280
Target Start/End: Complemental strand, 43556830 - 43556687
Alignment:
Q  138 gtccttattataagaaacaa-ttgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactt 236  Q
    ||||||||||||||||| || |||| |||||||||||||| ||||||||||||||||| || ||||| |||||||||||| | || ||||||| |||||     
T  43556830 gtccttattataagaaaaaaattgattttttaggttcatagaataattaatgtatcttattgtaaatgtagactagatacgtcacttacacaacgaacta 43556731  T
Q  237 aaaaagtcaattgttttttataagaagaatcggttggagtatta 280  Q
    ||||| |||||||||| |||||| ||| | |||  |||||||||    
T  43556730 aaaaaatcaattgtttcttataataaggaccggagggagtatta 43556687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 139 - 218
Target Start/End: Original strand, 24100770 - 24100849
Alignment:
Q  139 tccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacat 218  Q
    |||||||||||||||| |||| ||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||    
T  24100770 tccttattataagaaataattaactttttagattcattgaataattaatgtatcttgttataaatatagactagatacat 24100849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 36196503 - 36196382
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||| |||||| ||||||| |||||| ||||||||||||||||| || ||||| ||||||| |||||| || || | |||||||  |    
T  36196503 gtccttattataagaaaaaattgattttttagattcatagaataattaatgtatcttattgtaaatgtagactatatacatcacttataaaatgaaccaa 36196404  T
Q  238 aaaagtcaattgttttttataa 259  Q
    |||| |||||||||| ||||||    
T  36196403 aaaaatcaattgtttcttataa 36196382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 37895393 - 37895272
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||| | |||||||||||| |||||| |||||||||||||| || || ||||| |||||||||||||| || || |||||||||  |    
T  37895393 gtccttattataagaaaaagttgactttttagattcatagaataattaatgtattttattgtaaatgtagactagatacatcacttatacaatgaaccaa 37895294  T
Q  238 aaaagtcaattgttttttataa 259  Q
    |||| |||| ||||| ||||||    
T  37895293 aaaaatcaactgtttcttataa 37895272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 50511383 - 50511262
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||| | |||||| ||||| || ||| ||||||||||||||||| || ||||||||| ||| |||||| || ||||||||||||  |    
T  50511383 gtccttattataagaaaaagttgactctttagatttatagaataattaatgtatcttattgtaaatatagtctaaatacatcacttacacaatgaaccaa 50511284  T
Q  238 aaaagtcaattgttttttataa 259  Q
    |||||| |||||||| ||||||    
T  50511283 aaaagttaattgtttcttataa 50511262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 138 - 218
Target Start/End: Complemental strand, 8347630 - 8347550
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacat 218  Q
    ||||||||||||||||| | ||||||||||||||||||| ||||| ||||||||||| || ||||||||||||||||||||    
T  8347630 gtccttattataagaaaaagttgactttttaggttcatagaataaataatgtatcttattgtaaatatagactagatacat 8347550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 139 - 259
Target Start/End: Complemental strand, 27587383 - 27587263
Alignment:
Q  139 tccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaa 238  Q
    |||||||||||||||| |||| | |||||||||||||  |||||||||||||||| |||||||||||| ||||||||||| |  || | ||| ||  |||    
T  27587383 tccttattataagaaataatttattttttaggttcattgaataattaatgtatctcgttataaatatacactagatacatcatttatataataaatctaa 27587284  T
Q  239 aaagtcaattgttttttataa 259  Q
    |||||||||||||| ||||||    
T  27587283 aaagtcaattgtttcttataa 27587263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 241
Target Start/End: Complemental strand, 9813593 - 9813491
Alignment:
Q  139 tccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaa 238  Q
    ||||||| ||||| |||||||||||||||||||| ||   || ||||||| |||| |||||||||||||||||||||||| || |||||||||||| |||    
T  9813593 tccttataataagcaacaattgactttttaggtttattgcatgattaatgcatctcgttataaatatagactagatacatcacttacacaatgaacctaa 9813494  T
Q  239 aaa 241  Q
    |||    
T  9813493 aaa 9813491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 40592827 - 40592729
Alignment:
Q  161 actttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaagtcaattgttttttataa 259  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||| || || ||||||||   ||||||| |||||||| ||||||    
T  40592827 actttttaggtttatagaataattaatgtatcttgttataaatataaactagatacatcacttatacaatgaatccaaaaagttaattgtttcttataa 40592729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 135 - 280
Target Start/End: Original strand, 28460753 - 28460898
Alignment:
Q  135 tccgtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaac 234  Q
    ||||||| ||||||||||||   |||| ||||||| ||||| |  |||||||| ||||||||| ||||||||||||| |||||| || || | ||||||     
T  28460753 tccgtccctattataagaaatttttgattttttagattcattatgtaattaatttatcttgttgtaaatatagactaaatacatcacttatataatgaat 28460852  T
Q  235 ttaaaaagtcaattgttttttataagaagaatcggttggagtatta 280  Q
     ||||||| ||||||||| |||||| |||||||||  |||||||||    
T  28460853 ctaaaaagccaattgtttcttataataagaatcggagggagtatta 28460898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 121 - 243
Target Start/End: Original strand, 1140858 - 1140980
Alignment:
Q  121 atattctacttctttccgtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacatta 220  Q
    ||||| |||| ||| | ||| |||||| || |||||||||| ||||||| |||||  ||||||| |||||| ||||||||||||||||| |||||||| |    
T  1140858 atattatactccttccggtcattattagaataaacaattgaatttttagattcattgaataattgatgtattttgttataaatatagaccagatacatca 1140957  T
Q  221 cctacacaatgaacttaaaaagt 243  Q
    | |||||||||||  ||||||||    
T  1140958 cttacacaatgaatctaaaaagt 1140980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 259
Target Start/End: Original strand, 1205097 - 1205213
Alignment:
Q  142 ttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaa 241  Q
    ||||||||| |||||||| ||||||| | ||| | || ||||||||||||||| ||||||||||||||||||||||| || || ||||||||  ||||||    
T  1205097 ttattataaaaaacaattaacttttttgattcgtgaa-taattaatgtatcttattataaatatagactagatacatcacttagacaatgaatataaaaa 1205195  T
Q  242 gtcaattgttttttataa 259  Q
     |||||| ||| ||||||    
T  1205196 atcaattttttcttataa 1205213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 50511559 - 50511471
Alignment:
Q  144 attataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatga 232  Q
    ||||||||||| | |||||| |||||||||||| ||||||||||||||||| || |||||||| |||||||||||  | ||||||||||    
T  50511559 attataagaaaaagttgactctttaggttcatagaataattaatgtatcttattgtaaatataaactagatacatcccttacacaatga 50511471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 22210803 - 22210872
Alignment:
Q  142 ttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagacta 211  Q
    |||||||||||||||||||||||||||  |||||  |||||||||| ||||||||| |||||||||||||    
T  22210803 ttattataagaaacaattgactttttaaattcattgaataattaatatatcttgttgtaaatatagacta 22210872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 278
Target Start/End: Complemental strand, 22020064 - 22019932
Alignment:
Q  146 tataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaagtca 245  Q
    |||||| |||| |||||||||||| || || | |||||||||| |||| |||||||||||||| |||| |||| || |||| ||||||  |||||||| |    
T  22020064 tataagtaacagttgactttttagattaattagataattaatgcatctcgttataaatatagattagacacatcacttacagaatgaatctaaaaagtta 22019965  T
Q  246 attgttttttataagaagaatcggttggagtat 278  Q
    ||||||  |||||| ||| | ||| ||||||||    
T  22019964 attgttacttataataaggaccggatggagtat 22019932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 23559040 - 23558964
Alignment:
Q  142 ttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacat 218  Q
    |||||||||| ||||||||| |||||||| ||||   ||||||||| ||||| ||||||||||||||||||||||||    
T  23559040 ttattataagtaacaattgattttttaggctcattggataattaatatatctcgttataaatatagactagatacat 23558964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 52278101 - 52278025
Alignment:
Q  142 ttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacat 218  Q
    ||||||||||||| |||||||||||||| || ||| |||||||||| |||||| || ||||||||||||| ||||||    
T  52278101 ttattataagaaaaaattgactttttagatttatagaataattaatatatcttattgtaaatatagactaaatacat 52278025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 25874709 - 25874831
Alignment:
Q  138 gtccttattataagaaacaatt-gactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactt 236  Q
    ||||||||||||| ||| || | || ||||||| |||||| |||||||||||||| || || |||||||||||||||||||| || || |||||||||      
T  25874709 gtccttattataaaaaaaaaatagattttttagattcatagaataattaatgtattttattgtaaatatagactagatacatcacttatacaatgaacca 25874808  T
Q  237 aaaaagtcaattgttttttataa 259  Q
    ||||| | |||| ||| ||||||    
T  25874809 aaaaaattaattctttcttataa 25874831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 54673448 - 54673327
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgt-tataaatatagactagatacattacctacacaatgaactt 236  Q
    |||||||||||||||||||||||||||||||||||||| |  ||| | |||||||| || ||||  |||| || |||| |||||| ||  |||||||| |    
T  54673448 gtccttattataagaaacaattgactttttaggttcattatgtaagtgatgtatctagtctatatttata-acgagatgcattacttattcaatgaacct 54673350  T
Q  237 aaaaagtcaattgttttttataa 259  Q
    |||||||||| ||||| ||||||    
T  54673349 aaaaagtcaaatgtttcttataa 54673327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 19350748 - 19350629
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||||| || ||| | ||||||||||||||| ||| |||| ||||||| |||| ||||||||| ||||||||||| | || ||||||||||||  |    
T  19350748 gtccttattaaaaaaaaaagttgactttttaggtttatagaatacttaatgt-tcttattataaataaagactagatac-tcacttacacaatgaaccaa 19350651  T
Q  238 aaaagtcaattgttttttataa 259  Q
    |||| | |||||||| ||||||    
T  19350650 aaaaattaattgtttcttataa 19350629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 7086189 - 7086262
Alignment:
Q  186 atgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaagtcaattgttttttataa 259  Q
    |||||||| ||||||||| ||||| |||||||| || || ||||||||| ||||||||||| ||||| ||||||    
T  7086189 atgtatctcgttataaatgtagaccagatacatcacttaaacaatgaacctaaaaagtcaaatgtttcttataa 7086262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 24100941 - 24100884
Alignment:
Q  139 tccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgt 196  Q
    |||||||||||||||| |||| ||||||||| |||||  |||||||||||||||||||    
T  24100941 tccttattataagaaataattaactttttagattcattgaataattaatgtatcttgt 24100884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 54358020 - 54357925
Alignment:
Q  146 tataagaaacaattgactttttaggttcataaaataattaatgtatcttgttata-aatatagactagatacattacctacacaatgaacttaaaaa 241  Q
    ||||||||| ||||  ||||||||||||||  ||||||||||||||| |||| || ||| ||||| |||||||||| |||| |||||||| ||||||    
T  54358020 tataagaaaaaattatctttttaggttcatttaataattaatgtatc-tgttttacaatgtagaccagatacattaactactcaatgaacctaaaaa 54357925  T

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Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 32193485 - 32193540
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatct 193  Q
    |||||||||||||||||||||||||||||| ||||||| |  ||| ||||||||||    
T  32193485 gtccttattataagaaacaattgacttttttggttcattatgtaagtaatgtatct 32193540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 258
Target Start/End: Original strand, 38208321 - 38208379
Alignment:
Q  200 aaatatagactagatacattacctacacaatgaacttaaaaagtcaattgttttttata 258  Q
    ||||||||||||||||||| || || |||||||||| |||| ||||||||||| |||||    
T  38208321 aaatatagactagatacatcacttaaacaatgaactaaaaatgtcaattgtttcttata 38208379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 251
Target Start/End: Original strand, 56491082 - 56491195
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgt-tataaatatagactagatacattacctacacaatgaactt 236  Q
    |||||||||||||| | |||||||||||||||||||||   |||| |||||||||| || ||||  |||| || || |||||||  ||  ||||||||||    
T  56491082 gtccttattataagcagcaattgactttttaggttcattgtataagtaatgtatctagtctatatttata-acgaggtacattaattattcaatgaactt 56491180  T
Q  237 aaaaagtcaattgtt 251  Q
    ||||||||| |||||    
T  56491181 aaaaagtcatttgtt 56491195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 1100906 - 1100943
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcat 175  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  1100906 gtccttattataagaaacatttgactttttaggttcat 1100943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 175
Target Start/End: Complemental strand, 7086269 - 7086232
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcat 175  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  7086269 gtccttattataagaaacatttgactttttaggttcat 7086232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 29686410 - 29686447
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcat 175  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  29686410 gtccttattataagaaacatttgactttttaggttcat 29686447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 174
Target Start/End: Original strand, 25756722 - 25756758
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttca 174  Q
    ||||||||||||||||| |||||||||||||||||||    
T  25756722 gtccttattataagaaataattgactttttaggttca 25756758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 269
Target Start/End: Original strand, 27587256 - 27587387
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgt-tataaatatagactagatacattacctacacaatgaactt 236  Q
    |||||||||||||||||||||||||||||||| || || | |||| | |||||||| || ||||  |||| || ||||||||||  ||  |||||||| |    
T  27587256 gtccttattataagaaacaattgactttttagatttattatataaatgatgtatctagtgtatatttata-acgagatacattaattattcaatgaacct 27587354  T
Q  237 aaaaagtcaattgttttttataagaagaatcgg 269  Q
    ||||| | |||| ||| |||||| ||| |||||    
T  27587355 aaaaaataaattatttcttataataaggatcgg 27587387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 23226967 - 23227018
Alignment:
Q  145 ttataagaaacaattgactttttaggttcataaaataattaatgtatcttgt 196  Q
    |||||||||| |||||||||||||| ||||| |  |||||||||||||||||    
T  23226967 ttataagaaaaaattgactttttagattcattatgtaattaatgtatcttgt 23227018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 259
Target Start/End: Complemental strand, 1100967 - 1100913
Alignment:
Q  205 tagactagatacattacctacacaatgaacttaaaaagtcaattgttttttataa 259  Q
    |||||||||||||| || || ||||||||| ||||||||||| ||||| ||||||    
T  1100967 tagactagatacatcacttaaacaatgaacctaaaaagtcaaatgtttcttataa 1100913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 53225775 - 53225729
Alignment:
Q  145 ttataagaaacaattgactttttaggttcataaaataattaatgtat 191  Q
    |||||||||| |||||||||||||| |||||  ||||||||||||||    
T  53225775 ttataagaaaaaattgactttttagattcattgaataattaatgtat 53225729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Complemental strand, 4418235 - 4418198
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcat 175  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  4418235 gtccttattataagaaaaaattgattttttaggttcat 4418198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 33622890 - 33622927
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcat 175  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  33622890 gtccttattataagaaacaattaacttttttggttcat 33622927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 36196375 - 36196412
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcat 175  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  36196375 gtccttattataagaaacaattgatttttttggttcat 36196412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 43141776 - 43141813
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcat 175  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  43141776 gtccttattataagaaacaattaacttttttggttcat 43141813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 52136709 - 52136746
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcat 175  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  52136709 gtccttattataagaaaaaattaactttttaggttcat 52136746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Complemental strand, 54864202 - 54864165
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcat 175  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  54864202 gtccttattataagaaacaattaacttttttggttcat 54864165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 259
Target Start/End: Complemental strand, 50511465 - 50511405
Alignment:
Q  199 taaatatagactagatacattacctacacaatgaacttaaaaagtcaattgttttttataa 259  Q
    |||||||| |||||| ||||  | ||||||||||||| |||||||||| ||||| ||||||    
T  50511465 taaatataaactagacacatcccttacacaatgaactaaaaaagtcaagtgtttcttataa 50511405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 1e-40; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 138 - 246
Target Start/End: Original strand, 53703740 - 53703848
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||    
T  53703740 gtccttattataagaaacaattgacttttttggttcatagaataattaatgtatcttgttataaatatagactagatacatcacttacacaatgaaccta 53703839  T
Q  238 aaaagtcaa 246  Q
    ||| |||||    
T  53703840 aaaggtcaa 53703848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 31376313 - 31376192
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||| || |||| ||||||| ||    
T  31376313 gtccttattacaagaaacaattgacttttttggttcatagaataattaatgtatcttcttataaatatagactagatacatcacttacataatgaaccta 31376214  T
Q  238 aaaagtcaattgttttttataa 259  Q
    ||||||||| ||||| ||||||    
T  31376213 aaaagtcaaatgtttcttataa 31376192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 39617049 - 39616928
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| || |||| ||||||| |     
T  39617049 gtccttattacaagaaacaattgacttttttggttcatagaataattaatgtatcttgttataaatatagactagatacatcacttacataatgaacctt 39616950  T
Q  238 aaaagtcaattgttttttataa 259  Q
    ||||||||| ||||| ||||||    
T  39616949 aaaagtcaaatgtttcttataa 39616928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 45113872 - 45113751
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||| || ||||||||||||  |    
T  45113872 gtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatacatcacttacacaatgaaccaa 45113773  T
Q  238 aaaagtcaattgttttttataa 259  Q
    |||| |||||||||| ||||||    
T  45113772 aaaaatcaattgtttcttataa 45113751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 48643742 - 48643621
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||||| ||||||||||||||||||||| |||||  |||||||||||||| | ||||||||||||||||||||||||||| ||||| || ||| ||    
T  48643742 gtccttattacaagaaacaattgactttttagattcattgaataattaatgtatttcgttataaatatagactagatacattacttacacgattaaccta 48643643  T
Q  238 aaaagtcaattgttttttataa 259  Q
    ||||||||||||||| ||||||    
T  48643642 aaaagtcaattgtttcttataa 48643621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 138 - 258
Target Start/End: Complemental strand, 19227446 - 19227326
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||||||||||||||||||| ||||| |||||||| |||||||||| |||||||||||||||||||||||||||||| |  |||| ||| ||||||    
T  19227446 gtccttattataagaaacaattgatttttttggttcatagaataattaatttatcttgttataaatatagactagatacatcatttacataataaactta 19227347  T
Q  238 aaaagtcaattgttttttata 258  Q
    ||||||||| ||||| |||||    
T  19227346 aaaagtcaaatgtttcttata 19227326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 48346587 - 48346461
Alignment:
Q  139 tccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaa 238  Q
    |||||||||||||||||  || ||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||| || |||| ||| |||||||    
T  48346587 tccttattataagaaactttttactttttagattcattaagtaattaatgtatcttgttataaatatagactagatacatcacttacataataaacttaa 48346488  T
Q  239 aaagtcaattgttttttataagaagaa 265  Q
    ||||||||  ||||||||||| |||||    
T  48346487 aaagtcaaaagttttttataataagaa 48346461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 16123767 - 16123887
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||| ||||||||||| ||||| |||||||||||||| |||||| || ||||||||||||||||||||||| || |||||||||  |    
T  16123767 gtccttattataagaaaaaattgactttt-aggtttataaaataattaatatatcttattgtaaatatagactagatacattacttatacaatgaaccaa 16123865  T
Q  238 aaaagtcaattgttttttataa 259  Q
    |||||| |||||||||||||||    
T  16123866 aaaagttaattgttttttataa 16123887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 138 - 246
Target Start/End: Complemental strand, 44118321 - 44118213
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||||||||||||||||||||||||||| ||||| | ||||||||||||| |||||||||||||||||||||||||| |  |||||||||||  ||    
T  44118321 gtccttattataagaaacaattgactttttagattcattatataattaatgtatattgttataaatatagactagatacatcatttacacaatgaatcta 44118222  T
Q  238 aaaagtcaa 246  Q
    |||||||||    
T  44118221 aaaagtcaa 44118213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 138 - 257
Target Start/End: Original strand, 21944299 - 21944418
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||  | || ||||||||||||||||  || ||||||| ||||  |    
T  21944299 gtccttattataagaaaaaattgactttttaggttcatagaataattaatgtatcttagtgtagatatagactagatacaccacttacacaaggaaccaa 21944398  T
Q  238 aaaagtcaattgttttttat 257  Q
    |||| |||||||||| ||||    
T  21944399 aaaaatcaattgtttcttat 21944418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 139 - 240
Target Start/End: Original strand, 36191485 - 36191589
Alignment:
Q  139 tccttattataagaaacaattgactttttaggttcataaaataat---taatgtatcttgttataaatatagactagatacattacctacacaatgaact 235  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||   ||||||||||||||||| ||||||||||||||||| || |||| |||||||     
T  36191485 tccttattataagaaacaattgacttttttggttcatagaataatgattaatgtatcttgttatatatatagactagatacatcacttacataatgaacc 36191584  T
Q  236 taaaa 240  Q
    |||||    
T  36191585 taaaa 36191589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 142 - 259
Target Start/End: Complemental strand, 27302213 - 27302096
Alignment:
Q  142 ttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaa 241  Q
    ||||||||||||| | ||||||||||||||||||| ||||||||||||||||  || |||||||||||||||||||| || || |||||||||  |||||    
T  27302213 ttattataagaaaaagttgactttttaggttcatagaataattaatgtatctaattgtaaatatagactagatacatcacttatacaatgaaccaaaaaa 27302114  T
Q  242 gtcaattgttttttataa 259  Q
    || |||| ||| ||||||    
T  27302113 gttaattctttcttataa 27302096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 53284326 - 53284447
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||| | |||| ||||||| |||||||||||||||||||||||| || ||||| |||||||||||||| || || ||||| |||  |    
T  53284326 gtccttattataagaaaaagttgattttttagtttcataaaataattaatgtatcttattgtaaatgtagactagatacatcacttatacaataaaccaa 53284425  T
Q  238 aaaagtcaattgttttttataa 259  Q
    |||| |||||||||| ||||||    
T  53284426 aaaaatcaattgtttcttataa 53284447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 139 - 259
Target Start/End: Original strand, 43901592 - 43901712
Alignment:
Q  139 tccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaa 238  Q
    ||||||||||| |||| | ||||||||||||||||||| ||||||||||||||||| ||  ||||||||||||| ||||| |  ||||||||||||  ||    
T  43901592 tccttattatatgaaaaagttgactttttaggttcatagaataattaatgtatcttattgaaaatatagactaggtacatcatttacacaatgaaccaaa 43901691  T
Q  239 aaagtcaattgttttttataa 259  Q
    ||||| |||||||| ||||||    
T  43901692 aaagttaattgtttcttataa 43901712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 142 - 259
Target Start/End: Original strand, 19899626 - 19899744
Alignment:
Q  142 ttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatat--agactagatacattacctacacaatgaacttaaa 239  Q
    |||||||||||||||||||| |||||||||||||  ||||||||| | ||||||||||| ||||  ||||||||||||| |  |||||||||||| || |    
T  19899626 ttattataagaaacaattga-tttttaggttcattgaataattaacgcatcttgttatatatatatagactagatacatcatttacacaatgaacctata 19899724  T
Q  240 aagtcaattgttttttataa 259  Q
     |||||||||||||||||||    
T  19899725 gagtcaattgttttttataa 19899744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 139 - 250
Target Start/End: Original strand, 45746482 - 45746593
Alignment:
Q  139 tccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaa 238  Q
    |||||| |||||||||||||||| ||||||| || ||  |||||||||| ||||| |||||||||||||||||||| ||| || |||||| ||||  |||    
T  45746482 tccttagtataagaaacaattgattttttagatttattgaataattaatatatctcgttataaatatagactagatccatcacttacacattgaatataa 45746581  T
Q  239 aaagtcaattgt 250  Q
    ||||||||||||    
T  45746582 aaagtcaattgt 45746593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 8769175 - 8769249
Alignment:
Q  169 ggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaagt 243  Q
    |||||||| ||| ||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||    
T  8769175 ggttcatagaatgattaatgtatcttgttataaatatagattagatacatcacttacacaatgaacttaaaaagt 8769249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 50100333 - 50100211
Alignment:
Q  138 gtccttattataagaaac-aattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactt 236  Q
    ||||||||||||| |||  |||| |||| || | |||||| || |||||| ||||||| ||||||||||||||||||||||| || || ||||||||||     
T  50100333 gtccttattataaaaaaataattaacttgtttgattcatagaaaaattaacgtatcttattataaatatagactagatacatcacttatacaatgaacta 50100234  T
Q  237 aaaaagtcaattgttttttataa 259  Q
    |||||||||||||||| ||||||    
T  50100233 aaaaagtcaattgtttcttataa 50100211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 169 - 246
Target Start/End: Original strand, 8764273 - 8764350
Alignment:
Q  169 ggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaagtcaa 246  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||| || |||||||| |||||||||| ||||    
T  8764273 ggttcatagaataattaatgtatcttgttataaatatagattagatacatcacttacacaataaacttaaaaaatcaa 8764350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 259
Target Start/End: Complemental strand, 24489449 - 24489330
Alignment:
Q  139 tccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaa 238  Q
    |||||||||||||| | | |||| ||||||  |||||| ||||||||||||||||| |  |||||||| ||||||||||| ||||||| ||| |||| ||    
T  24489449 tccttattataagacaaagttga-tttttaaattcatagaataattaatgtatcttatagtaaatataaactagatacatcacctacaaaataaactaaa 24489351  T
Q  239 aaagtcaattgttttttataa 259  Q
    |||||||||| ||||||||||    
T  24489350 aaagtcaattattttttataa 24489330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 13356869 - 13356792
Alignment:
Q  141 cttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacat 218  Q
    ||||||||||||||| ||||||||||||  ||||| |||||| |||||||||| | ||||||||||||||||||||||    
T  13356869 cttattataagaaactattgactttttaaattcattaaataagtaatgtatctcggtataaatatagactagatacat 13356792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 138 - 218
Target Start/End: Original strand, 46220376 - 46220456
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacat 218  Q
    ||||||||||||||||| |||||| ||||||  |||||| ||||||||||||||||| || |||||||| |||||||||||    
T  46220376 gtccttattataagaaaaaattgattttttatattcatagaataattaatgtatcttattgtaaatatatactagatacat 46220456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 252
Target Start/End: Original strand, 2544491 - 2544583
Alignment:
Q  161 actttttaggttcataaaataattaatgtatcttgttataaa-tatagactagatacattacctacacaatgaacttaaaaagtcaattgttt 252  Q
    |||||||||||||||  ||||||| ||||||||||||||||| ||||||| | |||||| || || ||||||||  |||||||||||||||||    
T  2544491 actttttaggttcattgaataattgatgtatcttgttataaattatagaccaaatacatcacttatacaatgaatctaaaaagtcaattgttt 2544583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 241
Target Start/End: Original strand, 6061098 - 6061195
Alignment:
Q  142 ttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaa 241  Q
    ||||||| |||||||||  ||||||||| |||||| ||||||||||| || | |||||||||||| ||||||||||| || |||||||| || |||||||    
T  6061098 ttattattagaaacaat--actttttagattcatagaataattaatgcatttcgttataaatatatactagatacatcacttacacaataaatttaaaaa 6061195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 51980438 - 51980505
Alignment:
Q  178 aataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaagtca 245  Q
    |||||||||||||||| |||||||||||| |||||||| || || ||||||||||| |||||||||||    
T  51980438 aataattaatgtatctcgttataaatataaactagatatatcacttacacaatgaagttaaaaagtca 51980505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 259
Target Start/End: Complemental strand, 27363296 - 27363178
Alignment:
Q  141 cttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaa 240  Q
    |||||||||||||||  |  ||||||||| ||||| || ||||||| ||||||||||||||||||||| ||||||||| || |||| | ||||  |||||    
T  27363296 cttattataagaaactttctactttttagattcattaagtaattaacgtatcttgttataaatatagattagatacatcacttacatattgaatctaaaa 27363197  T
Q  241 agtcaattgttttttataa 259  Q
    | ||||  |||| ||||||    
T  27363196 aatcaaaagtttcttataa 27363178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 190 - 259
Target Start/End: Complemental strand, 25313364 - 25313295
Alignment:
Q  190 atcttgttataaatatagactagatacattacctacacaatgaacttaaaaagtcaattgttttttataa 259  Q
    |||| ||||||||||||||||| |||||| || |||||||||||| |||||| |||||| ||||||||||    
T  25313364 atctcgttataaatatagactaaatacatcacttacacaatgaacctaaaaaatcaattattttttataa 25313295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 208
Target Start/End: Original strand, 44664200 - 44664262
Alignment:
Q  146 tataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatataga 208  Q
    ||||| ||| |||||| |||||||||||||  ||||||||||||||||| |||||||||||||    
T  44664200 tataaaaaataattgattttttaggttcattgaataattaatgtatcttattataaatataga 44664262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 2544447 - 2544484
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcat 175  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2544447 gtccttattataagaaacaattgactttttaggttcat 2544484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 25313675 - 25313626
Alignment:
Q  142 ttattataagaaacaattgactttttaggttcataaaataattaatgtat 191  Q
    ||||||||||||||||||||||||||| |||||| ||| |||||||||||    
T  25313675 ttattataagaaacaattgactttttaagttcattaaacaattaatgtat 25313626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 138 - 206
Target Start/End: Complemental strand, 34269376 - 34269308
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatata 206  Q
    ||||||||||||| ||||| |||||||||||| |||||  |||||||||| ||| | ||||||||||||    
T  34269376 gtccttattataaaaaacatttgactttttagattcattgaataattaatatatttcgttataaatata 34269308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 50660076 - 50660020
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatctt 194  Q
    ||||||||||||||||| | |||||||||||| || ||| |||||||||||||||||    
T  50660076 gtccttattataagaaaaagttgactttttagatttatagaataattaatgtatctt 50660020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 172
Target Start/End: Original strand, 48643614 - 48643648
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggtt 172  Q
    |||||||||||||||||||||||||||||||||||    
T  48643614 gtccttattataagaaacaattgactttttaggtt 48643648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 31376185 - 31376222
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcat 175  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  31376185 gtccttattataagaaacatttgactttttaggttcat 31376222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 42896280 - 42896159
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||||||||||||||||| |||||||| ||||||  ||||| | |||||| | ||  | | ||||||| |||||||| |  ||  |||||||| ||    
T  42896280 gtccttattataagaaacaattcactttttacgttcattgaataactgatgtatatggtccttattatagaccagatacatcagttattcaatgaaccta 42896181  T
Q  238 aaaagtcaattgttttttataa 259  Q
    |||||| ||||| || ||||||    
T  42896180 aaaagtgaattgcttcttataa 42896159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Complemental strand, 2544597 - 2544560
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcat 175  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  2544597 gtccttattacaagaaacaattgactttttagattcat 2544560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 190
Target Start/End: Complemental strand, 28406594 - 28406553
Alignment:
Q  149 aagaaacaattgactttttaggttcataaaataattaatgta 190  Q
    |||||||||||||||||||||||||||  ||||||| |||||    
T  28406594 aagaaacaattgactttttaggttcattgaataatttatgta 28406553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 39616921 - 39616958
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcat 175  Q
    ||||||||||||||||||| ||||||||| ||||||||    
T  39616921 gtccttattataagaaacatttgacttttaaggttcat 39616958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Complemental strand, 43901719 - 43901682
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcat 175  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  43901719 gtccttattataagaaacaattaacttttttggttcat 43901682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 175
Target Start/End: Original strand, 45113745 - 45113781
Alignment:
Q  139 tccttattataagaaacaattgactttttaggttcat 175  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  45113745 tccttattataagaaacaattgatttttttggttcat 45113781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 1e-37; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 137 - 252
Target Start/End: Original strand, 9343129 - 9343244
Alignment:
Q  137 cgtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactt 236  Q
    |||| ||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||| || ||    
T  9343129 cgtctttattataagaaataattgactttttagattcatagaataattaatgtatcttgttataaatatagactagatacattatttacacaataaattt 9343228  T
Q  237 aaaaagtcaattgttt 252  Q
     |||||||||||||||    
T  9343229 gaaaagtcaattgttt 9343244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 138 - 255
Target Start/End: Complemental strand, 359683 - 359566
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||||||||||||||||||||||||||||||||   ||||| |||||||||| |||||||||||||| ||||||||| || |||||||||||| ||    
T  359683 gtccttattataagaaacaattgactttttaggttcaatgaataactaatgtatctcgttataaatatagattagatacatcacttacacaatgaacata 359584  T
Q  238 aaaagtcaattgtttttt 255  Q
    |||| |||||||||||||    
T  359583 aaaaatcaattgtttttt 359566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 142 - 259
Target Start/End: Original strand, 8264986 - 8265103
Alignment:
Q  142 ttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaa 241  Q
    ||||||||| |||||||||| |||||  ||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  8264986 ttattataaaaaacaattgatttttttagttcatagaataattaatgtatcttgttataaatatagactagatacatcacttacacaatgaacttaaaaa 8265085  T
Q  242 gtcaattgttttttataa 259  Q
     |||| | ||| ||||||    
T  8265086 atcaactttttcttataa 8265103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 138 - 280
Target Start/End: Original strand, 2913343 - 2913485
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||||||||| |||| |||||||||||| |||||  ||||||||||||   | ||||||||||||||||||||||||||| || ||||||||| ||    
T  2913343 gtccttattataagcaacatttgactttttagattcattgaataattaatgttcgtcgttataaatatagactagatacattacttatacaatgaaccta 2913442  T
Q  238 aaaagtcaattgttttttataagaagaatcggttggagtatta 280  Q
    ||||||||||||||  |||||| ||| | |||  |||||||||    
T  2913443 aaaagtcaattgttgcttataataaggaccggagggagtatta 2913485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 138 - 269
Target Start/End: Complemental strand, 12217630 - 12217497
Alignment:
Q  138 gtccttattataagaaacaa-ttgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaa-ct 235  Q
    ||||||||||||||||| || |||||||||||| |||||| ||||||||||||||||| || |||||||||||||||||||| || || ||||| || |     
T  12217630 gtccttattataagaaaaaaattgactttttagattcatagaataattaatgtatcttattgtaaatatagactagatacatcacttatacaataaacca 12217531  T
Q  236 taaaaagtcaattgttttttataagaagaatcgg 269  Q
     ||||| ||||||||||||||||| ||| |||||    
T  12217530 aaaaaaatcaattgttttttataataaggatcgg 12217497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 136 - 245
Target Start/End: Complemental strand, 29284638 - 29284529
Alignment:
Q  136 ccgtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaact 235  Q
    |||||||||| ||||||||||||| ||| ||||| |||||  ||||||||||| |||| |||||||||||||||||||||||| || |||| |||||||     
T  29284638 ccgtccttataataagaaacaattaactgtttagtttcattgaataattaatgcatctcgttataaatatagactagatacatcacttacataatgaacc 29284539  T
Q  236 taaaaagtca 245  Q
    ||||||||||    
T  29284538 taaaaagtca 29284529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 10145349 - 10145273
Alignment:
Q  142 ttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacat 218  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  10145349 ttattataaaaaaaaattgactttttaggttcataaaataattaatgtatcttattgtaaatatagactagatacat 10145273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 139 - 269
Target Start/End: Original strand, 30438754 - 30438884
Alignment:
Q  139 tccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaa 238  Q
    |||||||||||||||| | |||||||||||| |||||| |||||||||||||| || || |||||||||||||||||||| || || ||||| |||  ||    
T  30438754 tccttattataagaaaaagttgactttttagattcatagaataattaatgtattttattgtaaatatagactagatacatcacttatacaataaaccaaa 30438853  T
Q  239 aaagtcaattgttttttataagaagaatcgg 269  Q
    ||||| |||| ||| |||||| ||| |||||    
T  30438854 aaagttaattatttcttataataaggatcgg 30438884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 23916145 - 23916258
Alignment:
Q  145 ttataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaagtc 244  Q
    |||||| ||||| ||||||||| | |||||| ||||| ||||||||||| |||||||||||||| |||||| || || |||||||||||  |||||||||    
T  23916145 ttataaaaaacagttgactttt-acgttcattaaatatttaatgtatctcgttataaatatagattagatatatcacatacacaatgaatctaaaaagtc 23916243  T
Q  245 aattgttttttataa 259  Q
    |||||||| ||||||    
T  23916244 aattgtttcttataa 23916258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 28605708 - 28605587
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||| |  |||| |||||| |||||| ||||||||||||||||| || |||||||||  || |||||| || ||||||||||||  |    
T  28605708 gtccttattataagaaaaagctgaccttttagattcatagaataattaatgtatcttattgtaaatatagtttaaatacatcacttacacaatgaaccaa 28605609  T
Q  238 aaaagtcaattgttttttataa 259  Q
    |||||| |||||||| ||||||    
T  28605608 aaaagttaattgtttcttataa 28605587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 142 - 281
Target Start/End: Complemental strand, 12605744 - 12605605
Alignment:
Q  142 ttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaa 241  Q
    ||||||||||||| | ||||| ||||||||||||  ||||||||||||||||| || ||||||||||||| |||||| || |||  ||||||   |||||    
T  12605744 ttattataagaaaaagttgacattttaggttcatggaataattaatgtatcttattgtaaatatagactaaatacatcacttacgtaatgaataaaaaaa 12605645  T
Q  242 gtcaattgttttttataagaagaatcggttggagtattat 281  Q
     |||||||||| |||||| ||| | |||  ||||||||||    
T  12605644 atcaattgtttcttataataaggaacggagggagtattat 12605605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 33127915 - 33127844
Alignment:
Q  147 ataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacat 218  Q
    ||||||||||||||||||||||| || ||  ||||||||||||||||||||| |||||||||||||||||||    
T  33127915 ataagaaacaattgactttttagatttattgaataattaatgtatcttgttacaaatatagactagatacat 33127844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 139 - 221
Target Start/End: Complemental strand, 3847545 - 3847463
Alignment:
Q  139 tccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattac 221  Q
    ||||| |||||||||| || |||||||||||||||||| |||||||||| ||| || ||||||||||||||||||| ||||||    
T  3847545 tccttgttataagaaaaaagtgactttttaggttcatataataattaatatattttattataaatatagactagatgcattac 3847463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 257
Target Start/End: Original strand, 33128860 - 33128954
Alignment:
Q  163 tttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaagtcaattgttttttat 257  Q
    ||||||| |||||  ||||||||||||||||  ||||||| ||| |||| |||||| |  || | ||||||||||||||||||||| ||||||||    
T  33128860 tttttagattcatttaataattaatgtatctcattataaagataaactatatacataatttataaaatgaacttaaaaagtcaattattttttat 33128954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 2913471 - 2913416
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatct 193  Q
    |||||||||||||| |||||||||||||||||||||||   |||| ||||||||||    
T  2913471 gtccttattataagcaacaattgactttttaggttcattgtataagtaatgtatct 2913416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 248
Target Start/End: Original strand, 12240113 - 12240220
Alignment:
Q  139 tccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaa 238  Q
    |||||||||||| ||| |||||| |||||||||| ||  |||||||||   ||||  ||||||||||| | ||||||||| |  |||||||||||| |||    
T  12240113 tccttattataaaaaataattgattttttaggttaattgaataattaac--atctcattataaatataaattagatacatcatttacacaatgaacctaa 12240210  T
Q  239 aaagtcaatt 248  Q
    ||| ||||||    
T  12240211 aaaatcaatt 12240220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 175
Target Start/End: Complemental strand, 23916265 - 23916228
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcat 175  Q
    |||||||||||||||||||||||||||||||| |||||    
T  23916265 gtccttattataagaaacaattgactttttagattcat 23916228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 259
Target Start/End: Complemental strand, 26484382 - 26484302
Alignment:
Q  178 aataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaagtcaattgttttttataa 259  Q
    ||||||||||| |||||||||||||||||||||| |||||| |  |||||||  ||  ||||||||| ||||||| ||||||    
T  26484382 aataattaatgcatcttgttataaatatagactacatacatcatttacacaacaaatataaaaagtc-attgtttcttataa 26484302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 28605580 - 28605617
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcat 175  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  28605580 gtccttattataagaaacaattaacttttttggttcat 28605617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 17598121 - 17598173
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgta 190  Q
    |||||| |||||||||| |||||||||||||  || ||| |||||||||||||    
T  17598121 gtccttcttataagaaaaaattgactttttaaatttatagaataattaatgta 17598173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 175
Target Start/End: Complemental strand, 24986069 - 24986033
Alignment:
Q  139 tccttattataagaaacaattgactttttaggttcat 175  Q
    |||||||||||||| |||||| |||||||||||||||    
T  24986069 tccttattataagagacaattcactttttaggttcat 24986033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 1e-37; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 138 - 281
Target Start/End: Original strand, 51590440 - 51590583
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||  ||    
T  51590440 gtccttattataaaaaacaattgacttttttggttcatagaataattaatgtatcttgttataaatatagactagatacatcacttacacaatgaatcta 51590539  T
Q  238 aaaagtcaattgttttttataagaagaatcggttggagtattat 281  Q
    ||| ||||| | ||| |||||| ||| | |||  ||||||||||    
T  51590540 aaaggtcaactttttcttataataaggaccggagggagtattat 51590583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 142 - 243
Target Start/End: Original strand, 48565541 - 48565642
Alignment:
Q  142 ttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaa 241  Q
    ||||||||||||| |||||| ||||| |||||||| ||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  48565541 ttattataagaaataattgatttttttggttcatagaataattaaagtatcttgttataaatatagactaaatacatcacctacacaatgaacttaaaaa 48565640  T
Q  242 gt 243  Q
    ||    
T  48565641 gt 48565642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 139 - 259
Target Start/End: Original strand, 13321725 - 13321845
Alignment:
Q  139 tccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaa 238  Q
    ||||||||| ||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||  |||    
T  13321725 tccttattacaagaaacaattaacttttttggtttataaaataattaatgtatcttgttataaatatagactagatacatcacttacataatgaatctaa 13321824  T
Q  239 aaagtcaattgttttttataa 259  Q
    ||| |||| ||||| ||||||    
T  13321825 aaaatcaaatgtttcttataa 13321845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 158 - 259
Target Start/End: Original strand, 29438168 - 29438269
Alignment:
Q  158 ttgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaagtcaattgttttttat 257  Q
    ||||||||||||||||||| ||||||||||||||||| ||  ||||||||||||||||||| || ||||||||||||| |||||||||||||||| ||||    
T  29438168 ttgactttttaggttcatagaataattaatgtatcttattgaaaatatagactagatacatcacttacacaatgaactaaaaaagtcaattgtttcttat 29438267  T
Q  258 aa 259  Q
    ||    
T  29438268 aa 29438269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 139 - 278
Target Start/End: Complemental strand, 27687978 - 27687839
Alignment:
Q  139 tccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaa 238  Q
    ||||| |||||||||| |||| |||||||| ||| ||| ||||||||||||||||| || |||||||||||||||||||| || |||| |||||||| ||    
T  27687978 tccttgttataagaaaaaattaactttttaagtttatagaataattaatgtatcttattgtaaatatagactagatacatcacttacataatgaactaaa 27687879  T
Q  239 aaagtcaattgttttttataagaagaatcggttggagtat 278  Q
    ||| |||||| ||| |||||| ||||| |||  |||||||    
T  27687878 aaattcaattatttcttataataagaaccggagggagtat 27687839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 19998421 - 19998542
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||||  |||||||||||  |||||  | |||||||| ||||||||| |||||||||||||||||||| || |||||||||||  ||    
T  19998421 gtccttattataagaaacttttgactttttatattcattgagtaattaatatatcttgttgtaaatatagactagatacatcacttacacaatgaatcta 19998520  T
Q  238 aaaagtcaattgttttttataa 259  Q
    |||| |||||||||| ||||||    
T  19998521 aaaattcaattgtttcttataa 19998542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 31050260 - 31050381
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||||  |||||||||||| |||||    |||||||||||| ||||| ||||||||||||| |||||| || |||||||| ||| ||    
T  31050260 gtccttattataagaaacttttgactttttagattcattgtgtaattaatgtattttgttgtaaatatagactaaatacatcacttacacaataaaccta 31050359  T
Q  238 aaaagtcaattgttttttataa 259  Q
    ||||||||||||||| ||||||    
T  31050360 aaaagtcaattgtttcttataa 31050381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 142 - 259
Target Start/End: Complemental strand, 45977228 - 45977111
Alignment:
Q  142 ttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaa 241  Q
    ||||||||||||| | ||||||||||| ||| ||| ||||||||||||||||| || |||||||||||||||||||| ||||| ||||| |||  |||||    
T  45977228 ttattataagaaaaagttgactttttacgtttatagaataattaatgtatcttattgtaaatatagactagatacatcacctatacaataaaccaaaaaa 45977129  T
Q  242 gtcaattgttttttataa 259  Q
    || |||||||| ||||||    
T  45977128 gttaattgtttcttataa 45977111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 138 - 252
Target Start/End: Original strand, 15699474 - 15699588
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||||  |||| ||||||| |||||  | |||||||||||||||||| |||||||||||||||||||| || || ||||| ||| ||    
T  15699474 gtccttattataagaaacttttgattttttagattcattgagtaattaatgtatcttgttgtaaatatagactagatacatcacttatacaataaaccta 15699573  T
Q  238 aaaagtcaattgttt 252  Q
    |||| ||||||||||    
T  15699574 aaaattcaattgttt 15699588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 139 - 249
Target Start/End: Complemental strand, 52279371 - 52279261
Alignment:
Q  139 tccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaa 238  Q
    |||||||||||||||| | |||||||||||| |||||| |||||||||| |||||| || |||||||||||| ||||||| || ||||||||||||  ||    
T  52279371 tccttattataagaaaaagttgactttttagattcatataataattaatatatcttattgtaaatatagacttgatacatcacttacacaatgaaccaaa 52279272  T
Q  239 aaagtcaattg 249  Q
    ||| |||||||    
T  52279271 aaaatcaattg 52279261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 251
Target Start/End: Complemental strand, 22182903 - 22182790
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||||||||| |||||||||||||||| ||||||   |||||||||| |||| ||||||||||| | |||||||||| || |||||||| ||  ||    
T  22182903 gtccttattataagcaacaattgactttttaagttcattggataattaatgcatctcgttataaatatgggctagatacatcacttacacaataaatcta 22182804  T
Q  238 aaaagtcaattgtt 251  Q
    ||||||||||||||    
T  22182803 aaaagtcaattgtt 22182790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 138 - 284
Target Start/End: Original strand, 18038698 - 18038844
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||| | ||||||||||||||||||    ||| | |||||||| ||||||||| |||| ||||||||| || || ||||||||  ||    
T  18038698 gtccttattataagaaatatttgactttttaggttcattgcttaagtgatgtatctcgttataaatgtagattagatacatcacttaaacaatgaatcta 18038797  T
Q  238 aaaagtcaattgttttttataagaagaatcggttggagtattatcta 284  Q
    ||||||||| |||||||||||| ||| | |||  |||||||| ||||    
T  18038798 aaaagtcaaatgttttttataataaggaccggagggagtattgtcta 18038844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 180 - 278
Target Start/End: Complemental strand, 34174982 - 34174884
Alignment:
Q  180 taattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaagtcaattgttttttataagaagaatcggttggagtat 278  Q
    ||||||||||||||||||  ||||||| |||| |||||| || |||||||||||| ||||||||||||||||| |||||| ||| ||||| ||||||||    
T  34174982 taattaatgtatcttgttgcaaatataaactaaatacatcacttacacaatgaacctaaaaagtcaattgtttcttataataaggatcggatggagtat 34174884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 138 - 197
Target Start/End: Complemental strand, 25238711 - 25238652
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgtt 197  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  25238711 gtccttattataaaaaacaattgactttttaggttcatagaataattaatgtatcttgtt 25238652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 160 - 278
Target Start/End: Original strand, 13770741 - 13770859
Alignment:
Q  160 gactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaagtcaattgttttttataa 259  Q
    |||| ||||| |||||| ||||||||||||||||| || |||||||||||||||||||| || |||||||| || | ||||||| || ||||| ||||||    
T  13770741 gactatttagattcatagaataattaatgtatcttattgtaaatatagactagatacatcacttacacaataaattaaaaaagtaaactgtttcttataa 13770840  T
Q  260 gaagaatcggttggagtat 278  Q
     ||||| |||  |||||||    
T  13770841 taagaaccggagggagtat 13770859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 44224283 - 44224400
Alignment:
Q  141 cttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaa 240  Q
    |||||||||| ||| |||||||||||||| |||||| ||||||||||||||||| || ||||||||| |||||||||| || |  |||||||||  ||||    
T  44224283 cttattataaaaaa-aattgactttttagattcatagaataattaatgtatcttattgtaaatatagtctagatacatcacttgtacaatgaaccaaaaa 44224381  T
Q  241 agtcaattgttttttataa 259  Q
    | | |||| ||||||||||    
T  44224382 aattaattattttttataa 44224400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 218
Target Start/End: Complemental strand, 12175572 - 12175509
Alignment:
Q  155 caattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacat 218  Q
    ||||| |||||||||||||||  || ||||||||||||||||||||||||||||||||||||||    
T  12175572 caattaactttttaggttcattgaacaattaatgtatcttgttataaatatagactagatacat 12175509  T

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Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 278
Target Start/End: Complemental strand, 13320437 - 13320301
Alignment:
Q  142 ttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaa 241  Q
    ||||||||||||| | |||||||||||| |||||| |||||||||| |||||| || |||||||||  || |||||| |  |||||||| |||  |||||    
T  13320437 ttattataagaaaaagttgactttttagattcatagaataattaatatatcttattgtaaatatagtttaaatacatcatttacacaataaacaaaaaaa 13320338  T
Q  242 gtcaattgttttttataagaagaatcggttggagtat 278  Q
     | |||||||| |||||| ||||| |||  |||||||    
T  13320337 attaattgtttcttataataagaaccggagggagtat 13320301  T

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Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 259
Target Start/End: Complemental strand, 43851088 - 43850966
Alignment:
Q  139 tccttattataagaaacaattgacttttta--ggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactt 236  Q
    |||||||||||||||||  || ||||||||  | ||||| ||||||||||| |||||||||||||||||| | ||||||||| || |||| ||| ||  |    
T  43851088 tccttattataagaaactttttactttttatagattcattaaataattaatatatcttgttataaatatatattagatacatcacttacataataaatct 43850989  T
Q  237 aaaaagtcaattgttttttataa 259  Q
    ||||||||||  |||| ||||||    
T  43850988 aaaaagtcaaaagtttcttataa 43850966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 20486667 - 20486788
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||||||||||||  ||||  ||||||| |||||   |||||||| ||| ||| || ||||||||| ||||||| || ||  ||||||| ||| ||    
T  20486667 gtccttattataagaaattattgtttttttagattcattgtataattaacgtaacttcttgtaaatataggctagatatatcactaacacaataaaccta 20486766  T
Q  238 aaaagtcaattgttttttataa 259  Q
    ||||||||||| ||||||||||    
T  20486767 aaaagtcaattattttttataa 20486788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 2543322 - 2543394
Alignment:
Q  139 tccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagacta 211  Q
    ||||||| ||| |||||||||||||||| | ||||||  |||||||||| ||||| |||||||||||||||||    
T  2543322 tccttataataggaaacaattgacttttcaagttcattgaataattaatttatctcgttataaatatagacta 2543394  T

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Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 32837657 - 32837723
Alignment:
Q  149 aagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagata 215  Q
    |||||| | ||||||||||||||||||| |||||||||||||| || || | |||||||||||||||    
T  32837657 aagaaaaagttgactttttaggttcatagaataattaatgtattttattgttaatatagactagata 32837723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 139 - 175
Target Start/End: Original strand, 34174897 - 34174933
Alignment:
Q  139 tccttattataagaaacaattgactttttaggttcat 175  Q
    |||||||||||||||||||||||||||||||||||||    
T  34174897 tccttattataagaaacaattgactttttaggttcat 34174933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 172
Target Start/End: Complemental strand, 31050388 - 31050354
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggtt 172  Q
    |||||||||||||||||||||||||||||||||||    
T  31050388 gtccttattataagaaacaattgactttttaggtt 31050354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 259
Target Start/End: Complemental strand, 52030963 - 52030885
Alignment:
Q  181 aattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaagtcaattgttttttataa 259  Q
    |||||||||||||| ||||||||||| | ||||||||| || ||||| |||||  |||||| |||||| ||| ||||||    
T  52030963 aattaatgtatcttattataaatataaattagatacatcacttacacgatgaaactaaaaaatcaattttttcttataa 52030885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 259
Target Start/End: Original strand, 2855183 - 2855216
Alignment:
Q  226 acaatgaacttaaaaagtcaattgttttttataa 259  Q
    |||||||| |||||||||||||||||||||||||    
T  2855183 acaatgaatttaaaaagtcaattgttttttataa 2855216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Complemental strand, 19998549 - 19998512
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcat 175  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  19998549 gtccttattataagaaacaattgaatttttagattcat 19998512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 9552716 - 9552653
Alignment:
Q  139 tccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaat 203  Q
    ||||||||||||||||||||| || ||||||||| || | ||| |||||| ||||| ||||||||    
T  9552716 tccttattataagaaacaattaac-ttttaggtttattagatagttaatgcatcttattataaat 9552653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 172
Target Start/End: Complemental strand, 15699604 - 15699568
Alignment:
Q  136 ccgtccttattataagaaacaattgactttttaggtt 172  Q
    |||||||||||||| ||||||||||| ||||||||||    
T  15699604 ccgtccttattatatgaaacaattgaatttttaggtt 15699568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 6e-37; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 138 - 252
Target Start/End: Complemental strand, 28143883 - 28143769
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||  |    
T  28143883 gtccttattataagaaaaagttgactttttaggttcatagaataattaatgtatcttattataaatatagactagatacatcacttacacaatgaaccaa 28143784  T
Q  238 aaaagtcaattgttt 252  Q
    |||| ||||||||||    
T  28143783 aaaaatcaattgttt 28143769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 25795376 - 25795255
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||||| ||||||||||||||||||||| |||||  |||||||||||||| | ||||||||||||||||||||||||||| ||||| || ||| ||    
T  25795376 gtccttattacaagaaacaattgactttttagattcattgaataattaatgtatttcgttataaatatagactagatacattacttacacgattaaccta 25795277  T
Q  238 aaaagtcaattgttttttataa 259  Q
    ||||||||||||||| ||||||    
T  25795276 aaaagtcaattgtttcttataa 25795255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 45076352 - 45076473
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||| |||||| |||||||||||||| |||||||||||||| || || || ||||||||||||||||| || ||||||||||||  |    
T  45076352 gtccttattataagaaaaaattgattttttaggttcatagaataattaatgtattttattgtacatatagactagatacatcacttacacaatgaaccaa 45076451  T
Q  238 aaaagtcaattgttttttataa 259  Q
    ||||||||||||||||||||||    
T  45076452 aaaagtcaattgttttttataa 45076473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 141 - 257
Target Start/End: Complemental strand, 38449073 - 38448957
Alignment:
Q  141 cttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaa 240  Q
    |||||| |||||||||||||||||||||||||||| |||||||| ||| ||||||| |||||||||||  |||||||| || |||||||||||| |||||    
T  38449073 cttattttaagaaacaattgactttttaggttcattaaataattgatgcatcttgtgataaatatagatcagatacatcacttacacaatgaacataaaa 38448974  T
Q  241 agtcaattgttttttat 257  Q
    |||||||||||||||||    
T  38448973 agtcaattgttttttat 38448957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 142 - 258
Target Start/End: Original strand, 41464728 - 41464844
Alignment:
Q  142 ttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaa 241  Q
    ||||||||| |||||||||| |||||| ||||||  |||||||||||||||| |||||||||||||||||||||||| || |||||||||||| ||||||    
T  41464728 ttattataaaaaacaattgattttttaagttcattgaataattaatgtatctcgttataaatatagactagatacatcacttacacaatgaacctaaaaa 41464827  T
Q  242 gtcaattgttttttata 258  Q
     |||||| |||||||||    
T  41464828 atcaattattttttata 41464844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 15239830 - 15239709
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||||| |||||| || |||||||||||||||||||| || ||||||||||||  |    
T  15239830 gtccttattataagaaaaagttgactttttaggttcatagaataattaatatatcttattgtaaatatagactagatacatcacttacacaatgaaccaa 15239731  T
Q  238 aaaagtcaattgttttttataa 259  Q
     ||| |||||||||| ||||||    
T  15239730 caaaatcaattgtttcttataa 15239709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 36103531 - 36103410
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||| | |||| |||||||||||||| ||||||||||||||||| || ||||||||| |||||||||| || ||||||||||||| |    
T  36103531 gtccttattataagaaaaagttgattttttaggttcatagaataattaatgtatcttattgtaaatatagtctagatacatcacttacacaatgaactaa 36103432  T
Q  238 aaaagtcaattgttttttataa 259  Q
    ||| || |||||||| ||||||    
T  36103431 aaatgttaattgtttattataa 36103410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 142 - 268
Target Start/End: Complemental strand, 11687609 - 11687483
Alignment:
Q  142 ttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaa 241  Q
    |||||||||||||||||||||||||||| || ||  |||||||||| || || |||||||||||||||||||||||| || |||||||| || ||| |||    
T  11687609 ttattataagaaacaattgactttttagatttattgaataattaatataactcgttataaatatagactagatacatcacttacacaataaatttataaa 11687510  T
Q  242 gtcaattgttttttataagaagaatcg 268  Q
    ||||||||||| |||||| ||| ||||    
T  11687509 gtcaattgtttcttataataaggatcg 11687483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 6971580 - 6971701
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||||||||||||||||||||||||||  || ||   ||||||||||||| |||||||||||||||| ||||||||| |  |||||||||||| ||    
T  6971580 gtccttattataagaaacaattgactttttaaatttattgtataattaatgtatattgttataaatatagattagatacatcatttacacaatgaaccta 6971679  T
Q  238 aaaagtcaattgttttttataa 259  Q
    ||||||||| ||||| ||||||    
T  6971680 aaaagtcaaatgtttcttataa 6971701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 142 - 259
Target Start/End: Complemental strand, 9373528 - 9373411
Alignment:
Q  142 ttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaa 241  Q
    |||||||||||||||||||||||||||  |||||  ||||||||| |||||||||| ||||||||||||| |||||| || |||| ||| ||||||||||    
T  9373528 ttattataagaaacaattgactttttaaattcattgaataattaacgtatcttgttgtaaatatagactacatacatcacttacataataaacttaaaaa 9373429  T
Q  242 gtcaattgttttttataa 259  Q
     |||||||||| ||||||    
T  9373428 ctcaattgtttcttataa 9373411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 40534651 - 40534530
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||| | | ||||||||||||||||||| ||||| ||||||||||| || |||||||||||||||||||| |  || |||||||||| |    
T  40534651 gtccttattataagataaagttgactttttaggttcatagaataaataatgtatcttattgtaaatatagactagatacatcatttatacaatgaactaa 40534552  T
Q  238 aaaagtcaattgttttttataa 259  Q
    |||| |||||||||| ||||||    
T  40534551 aaaaatcaattgtttcttataa 40534530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 138 - 267
Target Start/End: Complemental strand, 27311715 - 27311586
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||| | ||||||||||||| ||||||| || ||  ||||||||| |||||||||||||||||||||||||||| || |  |  ||||||||| ||    
T  27311715 gtccttatcacaagaaacaattgattttttagatttattgaataattaacgtatcttgttataaatatagactagatatatcatttgtacaatgaaccta 27311616  T
Q  238 aaaagtcaattgttttttataagaagaatc 267  Q
    ||||||||||||||| |||||| |||||||    
T  27311615 aaaagtcaattgtttcttataataagaatc 27311586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 142 - 280
Target Start/End: Original strand, 27306725 - 27306861
Alignment:
Q  142 ttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaa 241  Q
    ||||||||||||| | ||||||||||||||||||  ||||||||||||||||| || ||||||||||||||||||   || |||||||| |||  |||||    
T  27306725 ttattataagaaaaagttgactttttaggttcattgaataattaatgtatcttattgtaaatatagactagatac--gacttacacaataaaccaaaaaa 27306822  T
Q  242 gtcaattgttttttataagaagaatcggttggagtatta 280  Q
     |||||||||| |||||| ||  ||||| ||||||||||    
T  27306823 atcaattgtttcttataataatgatcggatggagtatta 27306861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 139 - 243
Target Start/End: Complemental strand, 3365412 - 3365308
Alignment:
Q  139 tccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaa 238  Q
    |||||||||||||||| |||||| ||||| | |||||  |||||||||| |||||||||||||||||||| ||||||||| || || ||||||||| |||    
T  3365412 tccttattataagaaataattgatttttttgattcattgaataattaatatatcttgttataaatatagattagatacatcacttatacaatgaacctaa 3365313  T
Q  239 aaagt 243  Q
    |||||    
T  3365312 aaagt 3365308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 138 - 250
Target Start/End: Complemental strand, 23464635 - 23464522
Alignment:
Q  138 gtccttattataagaaacaattgact-ttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactt 236  Q
    ||||||||||||||||| | |||| | ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||  | || |||||||||      
T  23464635 gtccttattataagaaaaagttgattattttaggttcatagaataattaatgtatcttattgtaaatatagactagatacatctcttatacaatgaacca 23464536  T
Q  237 aaaaagtcaattgt 250  Q
    ||||||| ||||||    
T  23464535 aaaaagttaattgt 23464522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 259
Target Start/End: Original strand, 11724279 - 11724402
Alignment:
Q  142 ttattataagaaacaattgactttttaggttcat-----aaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactt 236  Q
    ||||||||| |||||||||||||||||| || ||     || ||||||||||||||| ||||||||||||||||||||| ||||| |||||||| ||  |    
T  11724279 ttattataaaaaacaattgactttttagatttattgaaaaatataattaatgtatctcgttataaatatagactagatatattacttacacaataaatct 11724378  T
Q  237 aaaaagtc-aattgttttttataa 259  Q
    | |||||| |||||||| ||||||    
T  11724379 ataaagtctaattgtttcttataa 11724402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 208
Target Start/End: Original strand, 6971506 - 6971576
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatataga 208  Q
    |||||||||||||||||||||||||||||||  || ||   ||||||||||||| ||||||||||||||||    
T  6971506 gtccttattataagaaacaattgactttttaaatttattgtataattaatgtatattgttataaatataga 6971576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 44283670 - 44283605
Alignment:
Q  139 tccttattataagaaacaattgactttttaggttcataaaataatt-aatgtatcttgttataaat 203  Q
    |||||||||||||||| |||||||||||||| |||||  ||||||| |||||||||||||||||||    
T  44283670 tccttattataagaaataattgactttttagattcattgaataattaaatgtatcttgttataaat 44283605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 4755474 - 4755532
Alignment:
Q  140 ccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgtta 198  Q
    |||||||||||||||||||| | ||||||| ||||| ||||||||||||||||| ||||    
T  4755474 ccttattataagaaacaattaattttttagattcattaaataattaatgtatctcgtta 4755532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 220
Target Start/End: Complemental strand, 28249064 - 28248989
Alignment:
Q  145 ttataagaaacaattgactttttaggttcataaaataattaatgtatcttgttata-aatatagactagatacatta 220  Q
    |||||||||| | |||||||||||| ||||| ||||||||||||||| ||| |||| ||||||||||| ||||||||    
T  28249064 ttataagaaaaagttgactttttagattcattaaataattaatgtat-ttggtatagaatatagactaaatacatta 28248989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 259
Target Start/End: Original strand, 14329203 - 14329269
Alignment:
Q  193 ttgttataaatatagactagatacattacctacacaatgaacttaaaaagtcaattgttttttataa 259  Q
    ||||||||||||||||  |||||||| || |||||||||||| ||| ||||||||||| | ||||||    
T  14329203 ttgttataaatatagatcagatacatcacttacacaatgaacctaacaagtcaattgtctcttataa 14329269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 172
Target Start/End: Original strand, 25795248 - 25795282
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggtt 172  Q
    |||||||||||||||||||||||||||||||||||    
T  25795248 gtccttattataagaaacaattgactttttaggtt 25795282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 175
Target Start/End: Original strand, 27311590 - 27311624
Alignment:
Q  141 cttattataagaaacaattgactttttaggttcat 175  Q
    |||||||||||||||||||||||||||||||||||    
T  27311590 cttattataagaaacaattgactttttaggttcat 27311624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 255
Target Start/End: Complemental strand, 31853275 - 31853160
Alignment:
Q  139 tccttattataagaaacaattgactttttaggttca-taaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||||||| ||| |||||| ||||||| |||| |  ||||||||||||||   ||||||||||||||| | |||  | || |||||||||||| ||    
T  31853275 tccttattataaaaaataattgattttttagattcaattgaataattaatgtattccgttataaatatagacaatata--tcacttacacaatgaaccta 31853178  T
Q  238 aaaagtcaattgtttttt 255  Q
    || |||| ||||||||||    
T  31853177 aatagtcgattgtttttt 31853160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 175
Target Start/End: Complemental strand, 6971708 - 6971671
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcat 175  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  6971708 gtccttattataagaaacatttgactttttaggttcat 6971671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 218
Target Start/End: Original strand, 12873734 - 12873813
Alignment:
Q  139 tccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttata-aatatagactagatacat 218  Q
    ||||| |||||||||| | |||||||||||| ||||| || |||||||||||| ||| |||| ||||||||||| ||||||    
T  12873734 tcctttttataagaaaaagttgactttttagattcattaagtaattaatgtat-ttggtatagaatatagactaaatacat 12873813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 21424911 - 21424948
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcat 175  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  21424911 gtccttattataagaaacaatttactttttagtttcat 21424948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 32457344 - 32457271
Alignment:
Q  145 ttataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacat 218  Q
    |||||||||| | |||||||||||| ||||| || ||||| |||||||||||    ||||||||||| ||||||    
T  32457344 ttataagaaaaatttgactttttagattcattaagtaattgatgtatcttgtctagaatatagactaaatacat 32457271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Complemental strand, 45076480 - 45076443
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcat 175  Q
    ||||||||||||| |||||||||||||||| |||||||    
T  45076480 gtccttattataaaaaacaattgacttttttggttcat 45076443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 259
Target Start/End: Complemental strand, 41464763 - 41464731
Alignment:
Q  227 caatgaacttaaaaagtcaattgttttttataa 259  Q
    ||||||||||||||| |||||||||||||||||    
T  41464763 caatgaacttaaaaaatcaattgttttttataa 41464731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 3819 - 3940
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||||||||||||||||||||||||| | |||||  |||| |||||| |||| |||||||||||||||||||||||| || |||||||||||| ||    
T  3819 gtccttattataagaaacaattgacttttttgattcattgaatacttaatgcatctcgttataaatatagactagatacatcacttacacaatgaaccta 3918  T
Q  238 aaaagtcaattgttttttataa 259  Q
    ||||||||||||||| ||||||    
T  3919 aaaagtcaattgtttcttataa 3940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 175
Target Start/End: Complemental strand, 3944 - 3910
Alignment:
Q  141 cttattataagaaacaattgactttttaggttcat 175  Q
    |||||||||||||||||||||||||||||||||||    
T  3944 cttattataagaaacaattgactttttaggttcat 3910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 3378 - 3257
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||||||||||||||||| |||||||| ||| ||  |||||| ||||||| | | |||||||||||||||||||||| || |||||||||||| ||    
T  3378 gtccttattataagaaacaattaactttttaagttaattgaataatcaatgtatttcgatataaatatagactagatacatcacttacacaatgaacata 3279  T
Q  238 aaaagtcaattgttttttataa 259  Q
    ||||||||||||||| ||||||    
T  3278 aaaagtcaattgtttcttataa 3257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 175
Target Start/End: Original strand, 3251 - 3287
Alignment:
Q  139 tccttattataagaaacaattgactttttaggttcat 175  Q
    |||||||||||||||||||||||||||||| ||||||    
T  3251 tccttattataagaaacaattgactttttatgttcat 3287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 1e-31; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 13932471 - 13932592
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||| |||||||||||||||||||||||| ||||||   ||||||||||||||| |||||||||| ||||||||||||| || |||||| ||||| ||    
T  13932471 gtccttgttataagaaacaattgactttttatgttcattggataattaatgtatctcgttataaatagagactagatacatcacttacacagtgaaccta 13932570  T
Q  238 aaaagtcaattgttttttataa 259  Q
    ||||||||||| ||| ||||||    
T  13932571 aaaagtcaattatttcttataa 13932592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 20502097 - 20502218
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||| | |||||||||||| |||||| ||||||||||||||||| || |||||||||||||||||||| || ||||||||||||  |    
T  20502097 gtccttattataagaaaaagttgactttttagattcatagaataattaatgtatcttattgtaaatatagactagatacatcacttacacaatgaaccaa 20502196  T
Q  238 aaaagtcaattgttttttataa 259  Q
    |||| | |||||||| ||||||    
T  20502197 aaaaattaattgtttcttataa 20502218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 138 - 281
Target Start/End: Original strand, 29451903 - 29452045
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||| | |||| ||||||| |||||| ||||||||||||||||| || |||||||| ||||||||||| || ||||||||||||  |    
T  29451903 gtccttattataagaaaaagttgattttttagattcatagaataattaatgtatcttattgtaaatatatactagatacatcacttacacaatgaac-ca 29452001  T
Q  238 aaaagtcaattgttttttataagaagaatcggttggagtattat 281  Q
    |||| |||||||||| |||||| ||| |||||  ||||||||||    
T  29452002 aaaaatcaattgtttcttataataaggatcggagggagtattat 29452045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 138 - 281
Target Start/End: Complemental strand, 29874455 - 29874312
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||| ||||||||| | || |||||||||||||||| |||||||||||||| || ||| ||||||||||||||||||| || || |||||||||  |    
T  29874455 gtccttaatataagaaaaagttaactttttaggttcatagaataattaatgtattttattaaaaatatagactagatacatcacttaaacaatgaaccaa 29874356  T
Q  238 aaaagtcaattgttttttataagaagaatcggttggagtattat 281  Q
    ||||||||||||||| |||||  ||||| |||  ||||||||||    
T  29874355 aaaagtcaattgtttcttatattaagaaccggagggagtattat 29874312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 138 - 269
Target Start/End: Original strand, 38978752 - 38978883
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||| | |||||||||||| |||||| |||||||||| |||||| || |||||||||||||||||||| || ||||||||||||  |    
T  38978752 gtccttattataagaaaaagttgactttttagattcatagaataattaatatatcttattgtaaatatagactagatacatcacttacacaatgaaccaa 38978851  T
Q  238 aaaagtcaattgttttttataagaagaatcgg 269  Q
    |||| | |||||||| |||||| ||| |||||    
T  38978852 aaaaattaattgtttcttataataaggatcgg 38978883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 7537034 - 7537152
Alignment:
Q  141 cttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaa 240  Q
    |||||||||||||| ||||||||| ||||||| ||| ||||||||||||||||| |  |||||||| ||||||||||| || ||||||||||||  ||||    
T  7537034 cttattataagaaaaaattgacttcttaggttaatagaataattaatgtatcttatcgtaaatatatactagatacatcacttacacaatgaaccaaaaa 7537133  T
Q  241 agtcaattgttttttataa 259  Q
    | |||||||||||||||||    
T  7537134 aatcaattgttttttataa 7537152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 35204937 - 35205054
Alignment:
Q  141 cttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaa 240  Q
    |||||||||||||| | |||| |||||||||||||| ||||||||||||||||| || ||||||||| ||||||||||  | ||||||||||||| ||||    
T  35204937 cttattataagaaaaagttga-tttttaggttcatagaataattaatgtatcttattgtaaatatagtctagatacatcccttacacaatgaactaaaaa 35205035  T
Q  241 agtcaattgttttttataa 259  Q
    |||||||||||| ||||||    
T  35205036 agtcaattgtttcttataa 35205054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 141 - 259
Target Start/End: Complemental strand, 35212222 - 35212105
Alignment:
Q  141 cttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaa 240  Q
    |||||||||||||| | |||| |||||||||||||| ||||||||||||||||| || ||||||||| ||||||||||  | ||||||||||||| ||||    
T  35212222 cttattataagaaaaagttga-tttttaggttcatagaataattaatgtatcttattgtaaatatagtctagatacatcccttacacaatgaactaaaaa 35212124  T
Q  241 agtcaattgttttttataa 259  Q
    |||||||||||| ||||||    
T  35212123 agtcaattgtttcttataa 35212105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 142 - 259
Target Start/End: Complemental strand, 73918 - 73801
Alignment:
Q  142 ttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaa 241  Q
    ||||||||||||||||||||||||| ||||||||  |||||||||| ||||| |||||||| | ||| ||||||||| |  |||||||||||  ||||||    
T  73918 ttattataagaaacaattgacttttcaggttcattgaataattaatatatctcgttataaacaaagagtagatacatcatttacacaatgaatctaaaaa 73819  T
Q  242 gtcaattgttttttataa 259  Q
    ||||||||||||||||||    
T  73818 gtcaattgttttttataa 73801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 24173558 - 24173437
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||| | ||||||||||| ||| ||| ||||||||||||||||| ||  ||||||||| ||||||||| || ||||||||||||| |    
T  24173558 gtccttattataagaaaaagttgactttttaagtttatagaataattaatgtatcttattgaaaatatagattagatacatcacttacacaatgaactaa 24173459  T
Q  238 aaaagtcaattgttttttataa 259  Q
    |||| |||||| ||| ||||||    
T  24173458 aaaaatcaattatttcttataa 24173437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 127 - 259
Target Start/End: Complemental strand, 35318663 - 35318531
Alignment:
Q  127 tacttctttccgtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctaca 226  Q
    |||||||||| |||||||||| ||||||||||||| |||||| ||| ||  |||||||||||||||| ||||||||||| ||||||||||||||  || |    
T  35318663 tacttctttcggtccttattacaagaaacaattgattttttaagtttattgaataattaatgtatctcgttataaatatggactagatacattatttata 35318564  T
Q  227 caatgaacttaaaaagtcaattgttttttataa 259  Q
    |||  |||||||| ||| |||| ||| ||||||    
T  35318563 caacaaacttaaatagttaattatttcttataa 35318531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 142 - 277
Target Start/End: Original strand, 27600773 - 27600907
Alignment:
Q  142 ttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaa 241  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||||||||||||| || |||||||||| |||||| || || |||||||||||   |||||    
T  27600773 ttattataagaaa-aattgactttttaagttcatagaataattaatgtatcttattgtaaatatagattagataaatcacttacacaatgaatcaaaaaa 27600871  T
Q  242 gtcaattgttttttataagaagaatcggttggagta 277  Q
     |||||| ||| |||||| ||| ||||| |||||||    
T  27600872 atcaattatttcttataataaggatcggatggagta 27600907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 269
Target Start/End: Complemental strand, 29002880 - 29002749
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||| | |||| |||||||||| ||  |||||||||| |||||| |   ||||||||||||||||||| || ||||||||||||  |    
T  29002880 gtccttattataagaaaaagttgattttttaggtttatggaataattaatatatcttatcgaaaatatagactagatacatcacttacacaatgaaccaa 29002781  T
Q  238 aaaagtcaattgttttttataagaagaatcgg 269  Q
    ||||||||||||||| |||||| ||| |||||    
T  29002780 aaaagtcaattgtttcttataacaaggatcgg 29002749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 142 - 280
Target Start/End: Original strand, 5355565 - 5355703
Alignment:
Q  142 ttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaa 241  Q
    ||||| ||||||| | || || ||||||||||||| ||||||||||||||||| || |||||||| |||| |||||| || ||||||||||||| |||||    
T  5355565 ttattctaagaaaaagttaacattttaggttcatagaataattaatgtatcttattgtaaatataaactaaatacatcacttacacaatgaactaaaaaa 5355664  T
Q  242 gtcaattgttttttataagaagaatcggttggagtatta 280  Q
    ||||| ||||| |||||| ||| | |||  |||||||||    
T  5355665 gtcaactgtttcttataataaggaccggagggagtatta 5355703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 138 - 248
Target Start/End: Complemental strand, 32455277 - 32455167
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||| | || || ||||| ||||||| ||||||||||||||||| || |||||||||||||||||||| || | |||||||||   |    
T  32455277 gtccttattataagaaaaagttaacattttaagttcatagaataattaatgtatcttattgtaaatatagactagatacatcacttccacaatgaatcaa 32455178  T
Q  238 aaaagtcaatt 248  Q
    |||||||||||    
T  32455177 aaaagtcaatt 32455167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 13278903 - 13279017
Alignment:
Q  145 ttataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaagtc 244  Q
    ||||||||||||||||| |||||||||| ||  |||| |||||| |||| |||||||||||| | ||||||||| || |||||||| ||  |||||||||    
T  13278903 ttataagaaacaattgattttttaggtttattgaatagttaatgcatctcgttataaatataaattagatacatcacttacacaataaatctaaaaagtc 13279002  T
Q  245 aattgttttttataa 259  Q
    || ||||| ||||||    
T  13279003 aactgtttcttataa 13279017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 33247429 - 33247309
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||| |||||||||| | ||||||||||||||||||||| |||||||| |||||| || ||||||||||||||||| || || || | |||||||  |    
T  33247429 gtccttgttataagaaaaagttgactttttaggttcataaa-taattaatatatcttattgtaaatatagactagatatatcacttatagaatgaaccaa 33247331  T
Q  238 aaaagtcaattgttttttataa 259  Q
    |||||| |||||| | ||||||    
T  33247330 aaaagttaattgtctcttataa 33247309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 138 - 218
Target Start/End: Original strand, 19211290 - 19211370
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacat 218  Q
    ||||||||||||||||||  |||||||||||  |||||  | |||||||||||||||||| ||||||||||||||||||||    
T  19211290 gtccttattataagaaacttttgactttttatattcattgagtaattaatgtatcttgttgtaaatatagactagatacat 19211370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 259
Target Start/End: Complemental strand, 9630369 - 9630252
Alignment:
Q  142 ttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaaa 241  Q
    ||||||||| ||| |||||| ||||||| |||||| ||||||||||||||||| || ||||||||  ||| ||| || || ||||||||||||  |||||    
T  9630369 ttattataacaaaaaattgattttttagattcatagaataattaatgtatcttattgtaaatataatctaaatatatcacttacacaatgaaccaaaaaa 9630270  T
Q  242 gtcaattgttttttataa 259  Q
     | |||||||| ||||||    
T  9630269 attaattgtttcttataa 9630252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 33970795 - 33970674
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||| | |||| | ||||| |||||| |||||||||||||| || ||| ||||||| |||| |||||| |  || ||||| || | |    
T  33970795 gtccttattataagaaaaagttgattgtttagtttcatagaataattaatgtattttattaaaaatatatactaaatacatcatttatacaataaaataa 33970696  T
Q  238 aaaagtcaattgttttttataa 259  Q
    |||||| |||||||| ||||||    
T  33970695 aaaagttaattgtttcttataa 33970674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 4527778 - 4527719
Alignment:
Q  203 tatagactagatacattacctacacaatgaacttaaaaagtcaattgttttttataagaa 262  Q
    |||||||||||||||| || |||||||| ||||||||||||||||||||| | |||||||    
T  4527778 tatagactagatacatcacttacacaataaacttaaaaagtcaattgtttctaataagaa 4527719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 229
Target Start/End: Original strand, 13128211 - 13128294
Alignment:
Q  146 tataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaa 229  Q
    ||||||||| |||| |||||||| ||| ||  |||||||||| ||||| |||||||||||||||||||| ||| || |||||||    
T  13128211 tataagaaataattaactttttatgtttattgaataattaatatatctcgttataaatatagactagatgcatcacttacacaa 13128294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 23286583 - 23286522
Alignment:
Q  18 tctaacgtgcaaacatatttatannnnnnnaatggggtgtaaattcgtacttaaattcttta 79  Q
    |||||||||||||| ||||||||       ||||||||||||||||||||||||||||||||    
T  23286583 tctaacgtgcaaacgtatttatatttttttaatggggtgtaaattcgtacttaaattcttta 23286522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 175
Target Start/End: Complemental strand, 8680679 - 8680642
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcat 175  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  8680679 gtccttattataagaaacatttgactttttaggttcat 8680642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 220
Target Start/End: Complemental strand, 3814102 - 3814027
Alignment:
Q  145 ttataagaaacaattgactttttaggttcataaaataattaatgtatcttgttata-aatatagactagatacatta 220  Q
    |||||||||| |||||||||||||| ||| |  ||||||||||||| |||| |||| ||||||||||| ||||||||    
T  3814102 ttataagaaaaaattgactttttagattcgttgaataattaatgta-cttggtatagaatatagactaaatacatta 3814027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 12442268 - 12442347
Alignment:
Q  162 ctttttaggttcataaaataattaatgtatcttgttata-aatatagactagatacattacctacacaatgaacttaaaaa 241  Q
    ||||||| |||||| |||||||||||||||| |||| || ||| ||||| |||||||||| |||| |||||||| ||||||    
T  12442268 ctttttatgttcattaaataattaatgtatc-tgttttacaatgtagaccagatacattaactactcaatgaacctaaaaa 12442347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 174
Target Start/End: Complemental strand, 13932599 - 13932563
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttca 174  Q
    ||||||||||||||||| |||||||||||||||||||    
T  13932599 gtccttattataagaaataattgactttttaggttca 13932563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 73794 - 73831
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcat 175  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  73794 gtccttattataaaaaacaattgactttttagattcat 73831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 190
Target Start/End: Original strand, 38394445 - 38394490
Alignment:
Q  145 ttataagaaacaattgactttttaggttcataaaataattaatgta 190  Q
    |||||||||| |||||||||||||| |||||  |||||||||||||    
T  38394445 ttataagaaaaaattgactttttagattcattgaataattaatgta 38394490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 1138348 - 1138300
Alignment:
Q  145 ttataagaaacaattgactttttaggttcataaaataattaatgtatct 193  Q
    |||||||||| |||||| ||||||  ||||| |||||||||||||||||    
T  1138348 ttataagaaaaaattgattttttaaattcattaaataattaatgtatct 1138300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 175
Target Start/End: Original strand, 29002753 - 29002789
Alignment:
Q  139 tccttattataagaaacaattgactttttaggttcat 175  Q
    ||||| ||||||||||||||||||||||| |||||||    
T  29002753 tccttgttataagaaacaattgacttttttggttcat 29002789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 255
Target Start/End: Complemental strand, 40329 - 40212
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||||  |||||||||||| |||||  | |||||||| ||||||||| |||||||||||||||||||| || |||||||||||| ||    
T  40329 gtccttattataagaaacttttgactttttagattcattgagtaattaatatatcttgttgtaaatatagactagatacatcacttacacaatgaaccta 40230  T
Q  238 aaaagtcaattgtttttt 255  Q
    |||| |||||| ||||||    
T  40229 aaaaatcaattttttttt 40212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 141 - 253
Target Start/End: Complemental strand, 5549 - 5437
Alignment:
Q  141 cttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaacttaaaa 240  Q
    |||||||||||||| |||||||||||||| |||||  ||||||||||||||  ||| ||||||||||||| ||||| | || ||||||||||| ||||||    
T  5549 cttattataagaaataattgactttttagattcattgaataattaatgtatactgtaataaatatagactcgatacttcacttacacaatgaatttaaaa 5450  T
Q  241 agtcaattgtttt 253  Q
    |||||||||||||    
T  5449 agtcaattgtttt 5437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 25753 - 25631
Alignment:
Q  138 gtccttattataagaaacaattgacttttt-aggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactt 236  Q
    ||||||||||||||||| | |||||||||| | ||||||| ||||||||||||||||| ||||||||||||||||||||||| || || | ||| |||      
T  25753 gtccttattataagaaaaagttgacttttttacgttcatagaataattaatgtatcttattataaatatagactagatacatcacttatataataaacca 25654  T
Q  237 aaaaagtcaattgttttttataa 259  Q
    ||||||| |||||||||||||||    
T  25653 aaaaagttaattgttttttataa 25631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 26724 - 26615
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||||  |||| ||||||| |||||  | |||||||||||||||||| |||||||||||||||||||| || |||| ||||||| ||    
T  26724 gtccttattataagaaacttttgattttttagattcattgagtaattaatgtatcttgttgtaaatatagactagatacatcacttacataatgaaccta 26625  T
Q  238 aaaagtcaat 247  Q
    ||||||||||    
T  26624 aaaagtcaat 26615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 26596 - 26633
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcat 175  Q
    |||||||||||||||||  |||||||||||||||||||    
T  26596 gtccttattataagaaaggattgactttttaggttcat 26633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 112961 - 112840
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||  ||||||||||||||||||||||| || ||  ||||||||||||||||||||||||||||||| ||||||||| |  |  ||||||||| ||    
T  112961 gtccttaacataagaaacaattgactttttagatttattgaataattaatgtatcttgttataaatatagattagatacatcatttgtacaatgaaccta 112862  T
Q  238 aaaagtcaattgttttttataa 259  Q
    ||| ||||||||||| ||||||    
T  112861 aaacgtcaattgtttcttataa 112840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 112833 - 112870
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcat 175  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  112833 gtccttattataagaaacaattgacgttttaggttcat 112870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 12756 - 12877
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    ||||||||||||||||| | ||||||||||||||||||    ||| | |||||||| ||||||||| |||||||||||||| || || | ||||||| ||    
T  12756 gtccttattataagaaatatttgactttttaggttcattgtttaagtgatgtatctcgttataaatgtagactagatacatcacttaaataatgaaccta 12855  T
Q  238 aaaagtcaattgttttttataa 259  Q
    ||||||||| ||||| ||||||    
T  12856 aaaagtcaaatgtttcttataa 12877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 12884 - 12763
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgt-tataaatatagactagatacattacctacacaatgaactt 236  Q
    ||||||||||||||||||| |||||||||||||||||| |  ||| | |||||||| || || |  |||| || |||||||| || || ||||||||| |    
T  12884 gtccttattataagaaacatttgactttttaggttcattatttaagtgatgtatctagtctacatttata-acgagatacatcacttaaacaatgaacct 12786  T
Q  237 aaaaagtcaattgttttttataa 259  Q
    |||||||||| | ||| ||||||    
T  12785 aaaaagtcaaatatttcttataa 12763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 12223 - 12344
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||||||||||||  ||||  ||||||| || ||   |||||||| ||||||| || ||||||||| |||||||||| ||  ||||||| ||| ||    
T  12223 gtccttattataagaaattattgtttttttagatttattgtataattaacgtatcttcttgtaaatataggctagatacatcactaacacaataaaccta 12322  T
Q  238 aaaagtcaattgttttttataa 259  Q
    ||||||||||| ||||||||||    
T  12323 aaaagtcaattattttttataa 12344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 7656 - 7777
Alignment:
Q  138 gtccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaatgaactta 237  Q
    |||||||||||||||||  ||||  ||||||| |||||   |||||||| ||| ||| || ||||||||| ||||||| || ||  ||||||| ||| ||    
T  7656 gtccttattataagaaattattgtttttttagattcattgtataattaacgtaacttcttgtaaatataggctagatatatcactaacacaataaaccta 7755  T
Q  238 aaaagtcaattgttttttataa 259  Q
    ||||||||||| ||||||||||    
T  7756 aaaagtcaattattttttataa 7777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 218
Target Start/End: Original strand, 17399 - 17475
Alignment:
Q  142 ttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacat 218  Q
    ||||||||||||||  |||| ||||||| |||||  | |||||||||||||||||  ||||||||||||||| ||||    
T  17399 ttattataagaaacttttgattttttagattcattgagtaattaatgtatcttgtagtaaatatagactagacacat 17475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0474 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 11767 - 11840
Alignment:
Q  145 ttataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacat 218  Q
    ||||||||||||||||| ||| ||| |  ||  |||||||||| |||||||||||| ||||| |||||||||||    
T  11767 ttataagaaacaattgattttgtagataaattgaataattaatatatcttgttatatatataaactagatacat 11840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 252
Target Start/End: Original strand, 19308 - 19419
Alignment:
Q  139 tccttattataagaaacaattgactttttaggttcataaaataattaatgtatcttgttataaatatagactagatacattacctacacaat-gaactta 237  Q
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T  19308 tccttattataagaaaaagttgactttttagattcat---agaattaatatatcttattgtaaatatagactacttacatcacttacaaaataaaaccaa 19404  T
Q  238 aaaagtcaattgttt 252  Q
    |||||||||||||||    
T  19405 aaaagtcaattgttt 19419  T

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