View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4747-Insertion-6 (Length: 274)
Name: NF4747-Insertion-6
Description: NF4747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4747-Insertion-6 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 8 - 274
Target Start/End: Original strand, 13367112 - 13367379
Alignment:
| Q |
8 |
aatttctacaagcatccattaatatatatgacacaaaaatatgatacattgacacaattatgctttgttattattaataggtactttgacgttgtttttg |
107 |
Q |
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| T |
13367112 |
aatttctacaagcatccattaatatatatgacacaaaaatatgatacattgacacaattatgctttgttattattaataggtactttgacgttgtttttg |
13367211 |
T |
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| Q |
108 |
gcaaaacatttcaaaggtataatgatataatttaattgtttggcatgttattttattgataatttgatacactaatgatgtttgaaatttataactaact |
207 |
Q |
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| T |
13367212 |
gcaaaacatttcaaaggtataatgatataatttaattgtttggcatgttattctattgataatttgatacactaatgatgttttaaatttataacaaact |
13367311 |
T |
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| Q |
208 |
taatag-aagagactaatttataattgaaattaccattgcagagttcatgggacaagtttctcagtcg |
274 |
Q |
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| T |
13367312 |
taatagaaagagactaatttataattgaaattaccattgcagagttcatgggacaagtttctcagtcg |
13367379 |
T |
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