View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4749-Insertion-7 (Length: 304)
Name: NF4749-Insertion-7
Description: NF4749
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4749-Insertion-7 |
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Alignment Details
Target: chr2 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 10 - 302
Target Start/End: Complemental strand, 42489911 - 42489619
Alignment:
| Q |
10 |
atattgtgtcaatgaaggtactattacggttaaagcacattatgttggtcactagctctcattttgtaagtatgcaaaattccatggaggtatttttcat |
109 |
Q |
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| T |
42489911 |
atattgtgtcaatgaaggtactattacggttaaagcacattatgttgatcactagctctcattttgtaaatatgcaaaattccatggaggtatttttcat |
42489812 |
T |
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| Q |
110 |
acaaagattaactcaacgttacaccacattattgggtattgtttctatctatatttctatataaagtctaattcatagtccagatcaaggtacacttagg |
209 |
Q |
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| T |
42489811 |
acaaagactaactcaacgttacaccgcattattgggtattgtttctatctatatttctatataaagtctaattcatagtccagatcaaggtacacttagg |
42489712 |
T |
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| Q |
210 |
gaccgattgaaatgggggcacccatgggttgggggccctccttctcacgcaataacacacacttagctattggtattgcatataaaatttaat |
302 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42489711 |
gaccgattgaaatgggggcaccaatgggttgggggccctccttctcacgcaataacacacacttagctattggtattgcatataaaatttaat |
42489619 |
T |
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