View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4750-Insertion-12 (Length: 438)
Name: NF4750-Insertion-12
Description: NF4750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4750-Insertion-12 |
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Alignment Details
Target: chr4 (Bit Score: 426; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 426; E-Value: 0
Query Start/End: Original strand, 8 - 437
Target Start/End: Original strand, 51911757 - 51912186
Alignment:
| Q |
8 |
atttaatagctataacgaataacatgagtaactaacttttatgtgcagtcgtttgccatgttttaatctgtcttggatctgctgttgctgctgctgctgt |
107 |
Q |
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| T |
51911757 |
atttaatagctataacgaataacatgagtaactaacttttatgtgcagtcgtttgccatgttttaatctgtcttggatctgctgctgctgctgctgctgt |
51911856 |
T |
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| Q |
108 |
gatggattatctgtacatctaaaattaccaagctgctgcagtgactgtaaaccatgcagttgttgcagttgcagcaactgttttccatccttcacttgtt |
207 |
Q |
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| T |
51911857 |
gatggattatctgtacatctaaaattaccaagctgctgcagtgactgtaaaccatgcagttgttgcagttgcagcaactgttttccatccttcacttgtt |
51911956 |
T |
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| Q |
208 |
ccttacctaagtggaactgttgctgttgtttctcttgtcccaaatcaaattgctgtaaacaaagccttggttcgggaaattgttgtacttttccaactag |
307 |
Q |
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| T |
51911957 |
ccttacctaagtggaactgttgctgttgtttctcttgtcccaaatcaaattgctgtaaacaaagccttggttcgggaaattgttgtacttttccaactag |
51912056 |
T |
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| Q |
308 |
ttgcaattttgggtgtccatcatgcccttctttatgcagttgcaaatgcacctgcacttgctcttgcccaacttgtccaaaggtaaatccatgttgctgt |
407 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51912057 |
ttgcaattttgggtgtccatcatgcccttctttatgcagttgcaaatgcacctgcacttgctcttgcccaacttgtccaaaggtaaatccatgttgctgt |
51912156 |
T |
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| Q |
408 |
tgtacaaagtcatgttttaatccttcttgt |
437 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
51912157 |
tgtacaaagtcatgttttaatccttcttgt |
51912186 |
T |
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