View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4750-Insertion-15 (Length: 195)

Name: NF4750-Insertion-15
Description: NF4750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4750-Insertion-15
NF4750-Insertion-15
[»] chr7 (11 HSPs)
chr7 (120-195)||(15431339-15431414)
chr7 (120-195)||(15431436-15431511)
chr7 (120-195)||(15450845-15450920)
chr7 (120-195)||(15489733-15489808)
chr7 (120-195)||(15557774-15557849)
chr7 (120-195)||(16944313-16944388)
chr7 (120-182)||(15534732-15534794)
chr7 (120-182)||(15427881-15427943)
chr7 (120-182)||(15480851-15480913)
chr7 (120-182)||(15483791-15483853)
chr7 (120-179)||(15447384-15447443)


Alignment Details
Target: chr7 (Bit Score: 68; Significance: 1e-30; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 120 - 195
Target Start/End: Complemental strand, 15431414 - 15431339
Alignment:
Q  120 tgttctcattctagtgcataattcatccattttcattatttgaccttattaattgagagtttttctaccatctgta 195  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15431414 tgttctcattcttgtgcataattcatccattttcattatttgaccttattaattgagagtttttctacaatctgta 15431339  T

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Target: chr7; HSP #2
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 120 - 195
Target Start/End: Complemental strand, 15431511 - 15431436
Alignment:
Q  120 tgttctcattctagtgcataattcatccattttcattatttgaccttattaattgagagtttttctaccatctgta 195  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15431511 tgttctcattcttgtgcataattcatccattttcattatttgaccttattaattgagagtttttctacaatctgta 15431436  T

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Target: chr7; HSP #3
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 120 - 195
Target Start/End: Complemental strand, 15450920 - 15450845
Alignment:
Q  120 tgttctcattctagtgcataattcatccattttcattatttgaccttattaattgagagtttttctaccatctgta 195  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15450920 tgttctcattccagtgcataattcatccattttcattatttgaccttattaattgagagtttttctacaatctgta 15450845  T

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Target: chr7; HSP #4
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 120 - 195
Target Start/End: Complemental strand, 15489808 - 15489733
Alignment:
Q  120 tgttctcattctagtgcataattcatccattttcattatttgaccttattaattgagagtttttctaccatctgta 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  15489808 tgttctcattctagtgcataattcatccattttcattatttgaccttactaattgagagtttttctacaatctgta 15489733  T

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Target: chr7; HSP #5
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 120 - 195
Target Start/End: Complemental strand, 15557849 - 15557774
Alignment:
Q  120 tgttctcattctagtgcataattcatccattttcattatttgaccttattaattgagagtttttctaccatctgta 195  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  15557849 tgttctcattctagtgcataattcatccattttcattatttgaccttactaattgagagtttttctacaatctgta 15557774  T

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Target: chr7; HSP #6
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 120 - 195
Target Start/End: Complemental strand, 16944388 - 16944313
Alignment:
Q  120 tgttctcattctagtgcataattcatccattttcattatttgaccttattaattgagagtttttctaccatctgta 195  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  16944388 tgttctcattctagtacacaattcatccattttcattatttgaccttattaattgagagtttttctaaaatctgta 16944313  T

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Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 182
Target Start/End: Complemental strand, 15534794 - 15534732
Alignment:
Q  120 tgttctcattctagtgcataattcatccattttcattatttgaccttattaattgagagtttt 182  Q
    ||||||||||| |||||||||| | ||||||||||| ||| |||||| |||||||||||||||    
T  15534794 tgttctcattcaagtgcataatccgtccattttcatcattcgaccttgttaattgagagtttt 15534732  T

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Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 120 - 182
Target Start/End: Complemental strand, 15427943 - 15427881
Alignment:
Q  120 tgttctcattctagtgcataattcatccattttcattatttgaccttattaattgagagtttt 182  Q
    ||||||||||| |||||||||| | ||||||||||| ||| |||||  |||||||||||||||    
T  15427943 tgttctcattcaagtgcataatccgtccattttcatcattggacctcgttaattgagagtttt 15427881  T

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Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 120 - 182
Target Start/End: Original strand, 15480851 - 15480913
Alignment:
Q  120 tgttctcattctagtgcataattcatccattttcattatttgaccttattaattgagagtttt 182  Q
    ||||||||||  |||||||||| ||||||||||||| ||| |||||  |||||||||||||||    
T  15480851 tgttctcatttaagtgcataatccatccattttcatcattcgacctcgttaattgagagtttt 15480913  T

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Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 120 - 182
Target Start/End: Complemental strand, 15483853 - 15483791
Alignment:
Q  120 tgttctcattctagtgcataattcatccattttcattatttgaccttattaattgagagtttt 182  Q
    |||| |||||| |||||||||| | ||||||||||| |||||||||  |||||||||||||||    
T  15483853 tgttttcattcaagtgcataatccgtccattttcatcatttgacctcgttaattgagagtttt 15483791  T

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Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 120 - 179
Target Start/End: Complemental strand, 15447443 - 15447384
Alignment:
Q  120 tgttctcattctagtgcataattcatccattttcattatttgaccttattaattgagagt 179  Q
    ||||||||||| |||||||||| | ||||||||||| ||| |||||  ||||||||||||    
T  15447443 tgttctcattcaagtgcataatccgtccattttcatcattcgacctcgttaattgagagt 15447384  T

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