View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4750-Insertion-6 (Length: 156)
Name: NF4750-Insertion-6
Description: NF4750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4750-Insertion-6 |
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Alignment Details
Target: chr2 (Bit Score: 76; Significance: 2e-35; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 7 - 101
Target Start/End: Original strand, 10157049 - 10157143
Alignment:
| Q |
7 |
acacatttcgtccaaatcctttaatttgatccacataggtttgattcaaagttaaaagatcagttggatgtca-tttcacagtataataccactaa |
101 |
Q |
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| T |
10157049 |
acacatttcgtccaaatcctt-aatttgatccacataggtttgattcaaagttaaaagatcagttggatgtgactttcacagtataataccactaa |
10157143 |
T |
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Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 121 - 156
Target Start/End: Original strand, 10157163 - 10157198
Alignment:
| Q |
121 |
atcatttctcctaaattttcttatacactcattctc |
156 |
Q |
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| T |
10157163 |
atcatttctcctaaattttcttatacactcattctc |
10157198 |
T |
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