View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4750-Insertion-8 (Length: 499)
Name: NF4750-Insertion-8
Description: NF4750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4750-Insertion-8 |
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Alignment Details
Target: chr8 (Bit Score: 439; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 439; E-Value: 0
Query Start/End: Original strand, 7 - 488
Target Start/End: Original strand, 30888187 - 30888677
Alignment:
| Q |
7 |
acattcgtggcttgatcttagtcacagaaattttcaatgatttcattctcaagaaatttgggttgccattcttcttttgatcttcaattaatcaactgaa |
106 |
Q |
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| T |
30888187 |
acattcgtggcttgatcttagtcacagaaattttcaatgatttcattctcaagaaatttgggttgccattcttcttttgatcgtcaattaatcaactgaa |
30888286 |
T |
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| Q |
107 |
caaaaatctacctttacaacttcattgccagacaatagatatgtgacatatgaattgaa---------gaacaaaaacttaggacacattaatgtatgcc |
197 |
Q |
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| T |
30888287 |
caaaaatccactttaacaacttcattgccagacaatagatatgtgacatatgaattgaataacatgaagaacaaaaacttaggacacattaatgtatgcc |
30888386 |
T |
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| Q |
198 |
gaacaatatgaaacaagttaactaaaatttgcacattttaatcgaaaggtgttctaattaagcatggtattggatttggaacacagtgatgcagagctaa |
297 |
Q |
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| T |
30888387 |
gaacaatatgaaacaagttaactaaaatttgcacattttaatcgaaaggtgttctaattaagcatggtattggatttggaacacagtgatgcagagctaa |
30888486 |
T |
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| Q |
298 |
ctaatagttctaagtgttttgtttgagaacatatatacaagtaatctaaagtatgttcttggtttggttaatttttctatgttattaaccaagaacaatc |
397 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
30888487 |
ctaatagttctaagtgttttgtttgagaacatatatacaagtaatctaaagtatgttcttggtttggttaatttttctatgttattagccaagaacaatc |
30888586 |
T |
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| Q |
398 |
atgagggaaattgttatgattgcaactgctgctacacttgggaatttgttggtgggatgggatagttcaaccattgcaggtgtgtgtgcgc |
488 |
Q |
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| T |
30888587 |
atgagggaaattgttatgattgcaactgctgctacacttgggaatttgttggtgggatgggatagttcaaccattgcaggtgtgtgtgcgc |
30888677 |
T |
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