View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4750_low_1 (Length: 398)
Name: NF4750_low_1
Description: NF4750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4750_low_1 |
 | |
|
| [»] scaffold0759 (1 HSPs) |
| | |
|
| [»] scaffold0056 (2 HSPs) |
| | |
|
| [»] scaffold0376 (1 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 286; Significance: 1e-160; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 42 - 381
Target Start/End: Complemental strand, 39954723 - 39954380
Alignment:
| Q |
42 |
ttttcacaaactagttataaacccgtgcgaagcacgggttgaatacagnnnnnnngaaaatcattaatacatgtttgaataagacaaatgaaaccaattt |
141 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39954723 |
ttttcacaaactagttataaacccgtgcgaagcacgggttgaatacattttttttgaaaatcattaatacatgtttgaataagacaaatgaaaccaattt |
39954624 |
T |
|
| Q |
142 |
atcaatataaaatccaagtgtactaagtcaatcctaaaatgttacagcactaaataaggaccatcatttaattctttaaattcaacaacagctaaaatta |
241 |
Q |
| |
|
| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
39954623 |
accaatataaaatctaagtgtactaagtcaatcctaaaatgttacagcactaaataaggaccatcatttaattctataaattcaacaacaactaaaatta |
39954524 |
T |
|
| Q |
242 |
ttcaagccaattaacattacatcatatacttgaataattagaccctaaacatctcaagataccagcaaaagtcttaatatatgtagattctactacaccg |
341 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39954523 |
ttcaagccaattaacattacatcatatacttgaataattagaccctaaacatctcaagataccagcaaaagtcttaatatatgtagattctactacaccg |
39954424 |
T |
|
| Q |
342 |
cgattgcagagaagtatttc----actgttgtgtatcggacaac |
381 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
39954423 |
cgattgcagagaagtatttcactaactgttgtgtatcggacaac |
39954380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 98 - 381
Target Start/End: Original strand, 1685210 - 1685497
Alignment:
| Q |
98 |
aaaatcattaatacatgtttgaataagacaaatgaaaccaatttatcaatataaaatccaagtgtactaagtcaatcctaaaatgttacagcactaaata |
197 |
Q |
| |
|
|||||| ||| || ||||||||||||| |||||||||| |||| || ||||||||||||||||||||| |||||| |||||||||| |||||||||| |
|
|
| T |
1685210 |
aaaatccttactatatgtttgaataagtcaaatgaaactgatttcctaagataaaatccaagtgtactaagccaatcccaaaatgttacggcactaaata |
1685309 |
T |
|
| Q |
198 |
aggaccatcatttaattctttaaattcaacaacagctaaaattattcaagccaattaacattacatcatatacttgaataattagaccctaaacatctca |
297 |
Q |
| |
|
|||||||||| |||||| |||||||||||||| ||||| |||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||| |
|
|
| T |
1685310 |
aggaccatcacttaattatttaaattcaacaatagctagaattattcaagccaattaacatcacaccatatacttgaataattagatcctaaacatctca |
1685409 |
T |
|
| Q |
298 |
agataccagcaaaagtcttaatatatgtagattctactacaccgcgattgcagagaagtatttc----actgttgtgtatcggacaac |
381 |
Q |
| |
|
|||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
1685410 |
agataccaacaaaagtcctaatatatgtagattctactacaccgcgattgcagagaagtatttcaccaactgttgtgtatcggacaac |
1685497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 35539209 - 35539245
Alignment:
| Q |
50 |
aactagttataaacccgtgcgaagcacgggttgaata |
86 |
Q |
| |
|
||||||||| |||||||||||||||||||||| |||| |
|
|
| T |
35539209 |
aactagttacaaacccgtgcgaagcacgggttcaata |
35539245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 183; Significance: 7e-99; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 98 - 381
Target Start/End: Original strand, 52037551 - 52037838
Alignment:
| Q |
98 |
aaaatcattaatacatgtttgaataagacaaatgaaaccaatttatcaatataaaatccaagtgtactaagtcaatcctaaaatgttacagcactaaata |
197 |
Q |
| |
|
|||||| ||| || ||||||||||||| |||||||||| |||| || ||||||||||||||||||||| |||||| |||||||||| |||||||||| |
|
|
| T |
52037551 |
aaaatccttactatatgtttgaataagtcaaatgaaactgatttcctaagataaaatccaagtgtactaagccaatcccaaaatgttacggcactaaata |
52037650 |
T |
|
| Q |
198 |
aggaccatcatttaattctttaaattcaacaacagctaaaattattcaagccaattaacattacatcatatacttgaataattagaccctaaacatctca |
297 |
Q |
| |
|
|||||||||| |||||| |||||||||||||| ||||| |||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||| |
|
|
| T |
52037651 |
aggaccatcacttaattatttaaattcaacaatagctagaattattcaagccaattaacatcacaccatatacttgaataattagatcctaaacatctca |
52037750 |
T |
|
| Q |
298 |
agataccagcaaaagtcttaatatatgtagattctactacaccgcgattgcagagaagtatttc----actgttgtgtatcggacaac |
381 |
Q |
| |
|
|||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
52037751 |
agataccaacaaaagtcctaatatatgtagattctactacaccgcgattgcagagaagtatttcaccaactgttgtgtatcggacaac |
52037838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 13624197 - 13624095
Alignment:
| Q |
99 |
aaatcattaatacatgtttgaataagacaaatgaaaccaatttatcaatataaaatccaagtgtactaagtcaatcctaaaatgttacagcactaaataa |
198 |
Q |
| |
|
||||| ||| || ||||||||||||| |||||||||| |||| || ||||||||||||||||||||| |||||| |||||||||| ||||||||||| |
|
|
| T |
13624197 |
aaatccttactatatgtttgaataagtcaaatgaaactgatttcctaagataaaatccaagtgtactaagccaatcccaaaatgttaccgcactaaataa |
13624098 |
T |
|
| Q |
199 |
gga |
201 |
Q |
| |
|
||| |
|
|
| T |
13624097 |
gga |
13624095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 17672429 - 17672393
Alignment:
| Q |
50 |
aactagttataaacccgtgcgaagcacgggttgaata |
86 |
Q |
| |
|
||||||||| |||||||||||||||||||||| |||| |
|
|
| T |
17672429 |
aactagttacaaacccgtgcgaagcacgggttcaata |
17672393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 18815169 - 18815133
Alignment:
| Q |
50 |
aactagttataaacccgtgcgaagcacgggttgaata |
86 |
Q |
| |
|
||||||||| |||||||||||||||||||||| |||| |
|
|
| T |
18815169 |
aactagttacaaacccgtgcgaagcacgggtttaata |
18815133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 180; Significance: 4e-97; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 97 - 381
Target Start/End: Original strand, 37477958 - 37478246
Alignment:
| Q |
97 |
gaaaatcattaatacatgtttgaataagacaaatgaaaccaatttatcaatataaaatccaagtgtactaagtcaatcctaaaatgttacagcactaaat |
196 |
Q |
| |
|
||||||| ||| || ||||||||||||| |||||||||| |||| || ||||||||||| |||||||||||||||| |||||||||| ||| ||||| |
|
|
| T |
37477958 |
gaaaatccttactatatgtttgaataagtcaaatgaaactgatttcctaagataaaatccaaatgtactaagtcaatcccaaaatgttactgcagtaaat |
37478057 |
T |
|
| Q |
197 |
aaggaccatcatttaattctttaaattcaacaacagctaaaattattcaagccaattaacattacatcatatacttgaataattagaccctaaacatctc |
296 |
Q |
| |
|
||||||||||| |||||| |||||||||||||| ||||| |||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||| |
|
|
| T |
37478058 |
aaggaccatcacttaattatttaaattcaacaatagctagaattattcaagccaattaacatcacaccatatacttgaataattagatcctaaacatctc |
37478157 |
T |
|
| Q |
297 |
aagataccagcaaaagtcttaatatatgtagattctactacaccgcgattgcagagaagtatttc----actgttgtgtatcggacaac |
381 |
Q |
| |
|
||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
37478158 |
aagataccaacaaaagtcctaatatatgtagattctactacaccgcgattgcagagaagtatttcaccaactgttgtgtatcggacaac |
37478246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 216 - 381
Target Start/End: Original strand, 21886748 - 21886917
Alignment:
| Q |
216 |
tttaaattcaacaacagctaaaattattcaagccaattaacattacatcatatacttgaataattagaccctaaacatctcaagataccagcaaaagtct |
315 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
21886748 |
tttaaattcaacaatagctagaattattcaagccaattaacatcacaccatatacttgaataattagaccctaaacatctcaagataccaacaaaagtcc |
21886847 |
T |
|
| Q |
316 |
taatatatgtagattctactacaccgcgattgcagagaagtatttc----actgttgtgtatcggacaac |
381 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
21886848 |
taatatatgtagattctactacaccgcgattgcagagaagtatttcaccaactgttgtgtatcggacaac |
21886917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 86
Target Start/End: Complemental strand, 3795753 - 3795718
Alignment:
| Q |
51 |
actagttataaacccgtgcgaagcacgggttgaata |
86 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| |
|
|
| T |
3795753 |
actagttacaaacccgtgcgaagcacgggttgaata |
3795718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 180; Significance: 4e-97; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 113 - 381
Target Start/End: Complemental strand, 44800527 - 44800255
Alignment:
| Q |
113 |
tgtttgaataagacaaatgaaaccaatttatcaatataaaatccaagtgtactaagtcaatcctaaaatgttacagcactaaataaggaccatcatttaa |
212 |
Q |
| |
|
|||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||| |||| |
|
|
| T |
44800527 |
tgtttgaataagacaaatgaaaccgatttactaagataaaatccaagtgtactaagtcaattccaaaatgttaccgcactaaataaggaccatcacttaa |
44800428 |
T |
|
| Q |
213 |
ttctttaaattcaacaacagctaaaattattcaagccaattaacattacatcatatacttgaataattagaccctaaacatctcaagataccagcaaaag |
312 |
Q |
| |
|
|| |||||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| |||||| |
|
|
| T |
44800427 |
ttatttaaattcaacaacaactagaattattcaagccaattaacatcacaccatatacttgaacgattagaccctaaacatctcaagataccaacaaaag |
44800328 |
T |
|
| Q |
313 |
tcttaatatatgtagattctactacaccgcgattgcagagaagtatttcac----tgttgtgtatcggacaac |
381 |
Q |
| |
|
|| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||| |
|
|
| T |
44800327 |
tcctaatatatgtagattctactataccgcgattgcagagaagtatttcaccaattgttgtgtatcgaacaac |
44800255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 189 - 363
Target Start/End: Complemental strand, 26456918 - 26456743
Alignment:
| Q |
189 |
cactaaataaggaccatcatttaattctttaaattcaacaacagctaa-aattattcaagccaattaacattacatcatatacttgaataattagaccct |
287 |
Q |
| |
|
|||| ||||||||||| || || || |||| ||||| |||| || || |||| |||||| |||||||||| | | ||||||||| || | | ||||||| |
|
|
| T |
26456918 |
cacttaataaggaccaccactttatgctttcaattccacaatagttaggaattcttcaaggcaattaacatgagaccatatacttcaacagtcagaccct |
26456819 |
T |
|
| Q |
288 |
aaacatctcaagataccagcaaaagtcttaatatatgtagattctactacaccgcgattgcagagaagtatttcac |
363 |
Q |
| |
|
||| ||||||||||||||||||||||| |||| |||| |||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
26456818 |
aaaaatctcaagataccagcaaaagtcctaatgtatgctgattctactacaccacgattgcagagaaatatttcac |
26456743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 178; Significance: 7e-96; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 99 - 381
Target Start/End: Complemental strand, 41053688 - 41053402
Alignment:
| Q |
99 |
aaatcattaatacatgtttgaataagacaaatgaaaccaatttatcaatataaaatccaagtgtactaagtcaatcctaaaatgttacagcactaaataa |
198 |
Q |
| |
|
||||| ||| || |||| |||||||||||||||||||| |||| || ||||||||||||||||||||| |||||| |||||||||| ||||||||||| |
|
|
| T |
41053688 |
aaatccttactatatgtctgaataagacaaatgaaaccgatttcctaagataaaatccaagtgtactaagccaatcccaaaatgttaccgcactaaataa |
41053589 |
T |
|
| Q |
199 |
ggaccatcatttaattctttaaattcaacaacagctaaaattattcaagccaattaacattacatcatatacttgaataattagaccctaaacatctcaa |
298 |
Q |
| |
|
||||||||| |||||| |||||||||||||| ||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
41053588 |
ggaccatcacttaattatttaaattcaacaatagctagaattattcaagccaattaacatcacaccatatacttgaataattagaccctaaacatctcaa |
41053489 |
T |
|
| Q |
299 |
gataccagcaaaagtcttaatatatgtagattctactacaccgcgattgcagagaagtatttc----actgttgtgtatcggacaac |
381 |
Q |
| |
|
||||||| |||||||| ||||||||||||||| ||||||||||||||| |||| ||||||||| |||||||||||||||||||| |
|
|
| T |
41053488 |
gataccaacaaaagtcctaatatatgtagattatactacaccgcgattacagataagtatttcaccaactgttgtgtatcggacaac |
41053402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 48519654 - 48519691
Alignment:
| Q |
49 |
aaactagttataaacccgtgcgaagcacgggttgaata |
86 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
48519654 |
aaactagttacaaacccgtgcgaagcacgggttgaata |
48519691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 189 - 363
Target Start/End: Complemental strand, 43382326 - 43382151
Alignment:
| Q |
189 |
cactaaataaggaccatcatttaattctttaaattcaacaacagctaa-aattattcaagccaattaacattacatcatatacttgaataattagaccct |
287 |
Q |
| |
|
|||| |||||||||||||| || || |||| ||||| |||| ||||| |||| |||||| |||||||||| | | | ||||||| |||||| | ||| | |
|
|
| T |
43382326 |
cacttaataaggaccatcactttatgctttcaattccacaatagctaggaattcttcaaggcaattaacatcagaccgtatacttcaataatcaaaccat |
43382227 |
T |
|
| Q |
288 |
aaacatctcaagataccagcaaaagtcttaatatatgtagattctactacaccgcgattgcagagaagtatttcac |
363 |
Q |
| |
|
||| |||||||||||||||| |||||| |||| |||| |||||||||||||| |||||||||| || |||||||| |
|
|
| T |
43382226 |
aaaaatctcaagataccagctaaagtcctaatgtatgctgattctactacaccacgattgcagataaatatttcac |
43382151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 86
Target Start/End: Complemental strand, 32847240 - 32847203
Alignment:
| Q |
49 |
aaactagttataaacccgtgcgaagcacgggttgaata |
86 |
Q |
| |
|
|||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
32847240 |
aaactagttacaaacccgtgcaaagcacgggttgaata |
32847203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 41531768 - 41531805
Alignment:
| Q |
49 |
aaactagttataaacccgtgcgaagcacgggttgaata |
86 |
Q |
| |
|
|||||||||| ||||||||||||| ||||||||||||| |
|
|
| T |
41531768 |
aaactagttacaaacccgtgcgaaacacgggttgaata |
41531805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 48; Significance: 3e-18; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 100 - 199
Target Start/End: Complemental strand, 11168793 - 11168694
Alignment:
| Q |
100 |
aatcattaatacatgtttgaataagacaaatgaaaccaatttatcaatataaaatccaagtgtactaagtcaatcctaaaatgttacagcactaaataag |
199 |
Q |
| |
|
|||| ||| |||||||||||||||| |||||||||| |||| | || ||||||||||||||| ||||| |||||| |||||||||| |||||| ||||| |
|
|
| T |
11168793 |
aatccttactacatgtttgaataagtcaaatgaaactgatttcttaagataaaatccaagtgtcctaagccaatcccaaaatgttaccgcactagataag |
11168694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 198
Target Start/End: Complemental strand, 11207525 - 11207439
Alignment:
| Q |
112 |
atgtttgaataagacaaatgaaaccaatttatcaatataaaatccaagtgtactaagtcaatcctaaaatgttacagcactaaataa |
198 |
Q |
| |
|
||||||||||||| ||||||||| |||| | || ||||| ||||||||||||||| |||||| |||||||||| ||||||||||| |
|
|
| T |
11207525 |
atgtttgaataagttaaatgaaactgatttcttaagataaactccaagtgtactaagccaatcccaaaatgttaccgcactaaataa |
11207439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 307
Target Start/End: Original strand, 4158286 - 4158356
Alignment:
| Q |
237 |
aattattcaagccaattaacattacatcatatacttgaataattagaccctaaacatctcaagataccagc |
307 |
Q |
| |
|
|||| |||||| |||||||||| | | ||||||||| |||||| ||| |||||| |||||||||||||||| |
|
|
| T |
4158286 |
aattcttcaagtcaattaacatcagaccatatacttcaataatcagatcctaaaaatctcaagataccagc |
4158356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 81
Target Start/End: Complemental strand, 11207700 - 11207668
Alignment:
| Q |
49 |
aaactagttataaacccgtgcgaagcacgggtt |
81 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| |
|
|
| T |
11207700 |
aaactagttacaaacccgtgcgaagcacgggtt |
11207668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0759 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0759
Description:
Target: scaffold0759; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 3423 - 3459
Alignment:
| Q |
50 |
aactagttataaacccgtgcgaagcacgggttgaata |
86 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3423 |
aactagttataaacccgtgcgaagcacgggttgaata |
3459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0056 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0056
Description:
Target: scaffold0056; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 347
Target Start/End: Complemental strand, 52793 - 52710
Alignment:
| Q |
264 |
catatacttgaataattagaccctaaacatctcaagataccagcaaaagtcttaatatatgtagattctactacaccgcgattg |
347 |
Q |
| |
|
||||||||| |||||| |||||||||| ||||||||||| | ||||||||||||| |||| || |||| |||||||||||| |
|
|
| T |
52793 |
catatacttcaataatcagaccctaaaaatctcaagatatcgacaaaagtcttaatgtatgctaatactaccacaccgcgattg |
52710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0056; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 347
Target Start/End: Complemental strand, 57906 - 57823
Alignment:
| Q |
264 |
catatacttgaataattagaccctaaacatctcaagataccagcaaaagtcttaatatatgtagattctactacaccgcgattg |
347 |
Q |
| |
|
||||||||| |||||| |||||||||| ||||||||||| | ||||||||||||| |||| || |||| |||||||||||| |
|
|
| T |
57906 |
catatacttcaataatcagaccctaaaaatctcaagatatcgacaaaagtcttaatgtatgctaatactaccacaccgcgattg |
57823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0376 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0376
Description:
Target: scaffold0376; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 10783 - 10819
Alignment:
| Q |
50 |
aactagttataaacccgtgcgaagcacgggttgaata |
86 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
10783 |
aactagttacaaacccgtgcgaagcacgggttgaata |
10819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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