View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4750_low_8 (Length: 249)

Name: NF4750_low_8
Description: NF4750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4750_low_8
NF4750_low_8
[»] chr6 (1 HSPs)
chr6 (143-233)||(10086842-10086932)


Alignment Details
Target: chr6 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 143 - 233
Target Start/End: Original strand, 10086842 - 10086932
Alignment:
143 taggtatggaaatggaacataataaaacaagtttcctatcctcaaataaatttgaatatttaacggtatttgatatttgacatacatacac 233  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
10086842 taggtatggaaatggaacataataaaacaagtttcctatcctcaaatcaatttgaatatttaacggtatttgatatttgatatacatacac 10086932  T

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