View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4751_low_1 (Length: 626)
Name: NF4751_low_1
Description: NF4751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4751_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 559; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 559; E-Value: 0
Query Start/End: Original strand, 10 - 607
Target Start/End: Complemental strand, 28551170 - 28550573
Alignment:
| Q |
10 |
attatactcgagtcatcgtaatctattgaaccgtatgaatatctcgtgtaagattatcacctgtgaaaagagatcatgtcttatgtgcaagaatgagtct |
109 |
Q |
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| T |
28551170 |
attatactcgagtcatcgtaatctattgaaccgtatgaatatctcgtgtaagattatcacctgtgaaaagagatcatgtcttatgtgcaagaatgagtct |
28551071 |
T |
|
| Q |
110 |
acgaacgatccaacaagacaaccatctgggatcttagaggaaattcgcaattggcgtgaagatgagatagagtctctagcacattaattcagttttattg |
209 |
Q |
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| T |
28551070 |
acgaacgatccaacaagacaaccatctgggatcttagaggaaattcgcaattggcgtgaagatgagatagattctctagcacattaattcagttttattg |
28550971 |
T |
|
| Q |
210 |
aaatgtgtttaatatggcatgaaccttgtgatttttaaacatcaataatacttcactttcctttttgttgggacggtgcatgtgcatggcttgcagtttt |
309 |
Q |
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| T |
28550970 |
aaatgtgtttaatatggcatgaaccttgtgatttttaaacatcaataatacttcactttcctttttgttgggacggtgcatgtgcatggcttgcagtttt |
28550871 |
T |
|
| Q |
310 |
ctagtcttatgggtatatattgagaaatacaatagtcttttaaagtattgcagtaaatgataattatatggtgttttgtcttttaaagtattgattaagc |
409 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28550870 |
ctagtcttatgggtatatattgagaaatacaatagtcttttaaagtattgcagtaaatgataattatatggtgttttgtcttttaaagtattgattaagc |
28550771 |
T |
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| Q |
410 |
tttcagtttagagcagtaatccnnnnnnnnnaagcaaaaatattttatctaaaccattgcaaaactgcattaagaggataaagccaaaaagtaatactcc |
509 |
Q |
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|||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28550770 |
tttcagtttagagcagtaattctttttttttaagtaaaaatattttatctaaaccattgcaaaactgcattaagaggataaagccaaaaagtaatactcc |
28550671 |
T |
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| Q |
510 |
agggacaccaaaagtaactcctctgctacgtgtaccaaaataccaacagaaaccaaaacacatttactcccttcccttacctcaccaaaagctactct |
607 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28550670 |
agggacaccaaaagtaactcctctgctacgtgtaccaaaataccaacagaaaccaaaacacatttactcccttcccttacctcaccaaaagctactct |
28550573 |
T |
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