View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4752-Insertion-16 (Length: 118)
Name: NF4752-Insertion-16
Description: NF4752
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4752-Insertion-16 |
 | |
|
Alignment Details
Target: chr6 (Bit Score: 94; Significance: 2e-46; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 94; E-Value: 2e-46
Query Start/End: Original strand, 8 - 109
Target Start/End: Original strand, 10069314 - 10069415
Alignment:
| Q |
8 |
aattgtcttgttgatgagagaggaaataagttttggtggtttcattcttcttgtttttgagacgattaactaaacgcaacgcagatactcacatgcctct |
107 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
10069314 |
aattgtcttgttgatgagagaggaaataagttttggtggtttcattcttcttgtttttgagacgattaactgaacgcaacgcagaaactcacatgcctct |
10069413 |
T |
|
| Q |
108 |
tt |
109 |
Q |
| |
|
|| |
|
|
| T |
10069414 |
tt |
10069415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University