View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4752_high_14 (Length: 344)
Name: NF4752_high_14
Description: NF4752
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4752_high_14 |
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Alignment Details
Target: chr3 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 12 - 328
Target Start/End: Original strand, 41276470 - 41276787
Alignment:
| Q |
12 |
gaacctgtgactaaacaagaactattcatctaattaatgagttcatctgctactagtaaactcaacttatgatagggatttaggactgagtaacagtcat |
111 |
Q |
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| T |
41276470 |
gaacctctgactaaacaagaactattcatctaattaatgagttcatctgctactagtcaactcaacttatgatagggatttaggactgagtaacagtcat |
41276569 |
T |
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| Q |
112 |
tttcattgtctatgcttgaaaactgacttagtcctcaatagagtatctagagtcgtattaggcgaattcctgggaacactatctcattctaacttcgatg |
211 |
Q |
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| T |
41276570 |
tttcattgtctattcttgaaaactgacttagtcctcaatagagtatctagagtcgtattaggcgaattcgtgggaacactatctcattctaacttcgatg |
41276669 |
T |
|
| Q |
212 |
gagaaactcaattgaccaatattcacagcaatagtagttacattataataatagttaaatcatgaagttgagtttacatggttat-ggaatagatcctat |
310 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
41276670 |
gagaaactcaattgaccaatattcacagcaatagtagttacattataataatagttaaatcatgaagttgagtttacatggttatgggaatagatcctat |
41276769 |
T |
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| Q |
311 |
tttgtagaaatttctgat |
328 |
Q |
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|||||||||||||||||| |
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| T |
41276770 |
tttgtagaaatttctgat |
41276787 |
T |
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