View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4752_high_27 (Length: 249)
Name: NF4752_high_27
Description: NF4752
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4752_high_27 |
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Alignment Details
Target: chr1 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 15767216 - 15766974
Alignment:
| Q |
1 |
cattaacaagagtaataaaatacctatgaccagagggagtcaatttatacatattgatacaagatgcatatagagaatcttgaaatggtttttatcaaca |
100 |
Q |
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| T |
15767216 |
cattaacaagagtaataaaatacctatgaccagagggagtcaatttatacatattgatacaagatgcatatagagaatcttgaaatggtttttatcaaca |
15767117 |
T |
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| Q |
101 |
tatgattcctaaaaatataacttgtattttctttatatttgactcctttgtaaaacttcagcttgctccaccactgcttaaaactgtagtatatactctt |
200 |
Q |
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| T |
15767116 |
tatgattcctaaaaatataacttgtattttctttatatttgactcctttgtaaaacttcagcttgctccaccactgcttaaaactgtagtatatactctt |
15767017 |
T |
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| Q |
201 |
cttgtttctgatttccaatcaattgaaatttgctttcttctct |
243 |
Q |
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| T |
15767016 |
cttgtttctgatttccaatcaattgaaatttgctttcttctct |
15766974 |
T |
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