View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4752_high_6 (Length: 487)
Name: NF4752_high_6
Description: NF4752
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4752_high_6 |
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Alignment Details
Target: chr8 (Bit Score: 470; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 470; E-Value: 0
Query Start/End: Original strand, 1 - 470
Target Start/End: Complemental strand, 33824695 - 33824226
Alignment:
| Q |
1 |
taatggtaaaagaagatttgaccggtcaacaaaagaaaaagaacacgtagttacacttattactgatattgggtttgaattgcaccattggtagttggaa |
100 |
Q |
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| T |
33824695 |
taatggtaaaagaagatttgaccggtcaacaaaagaaaaagaacacgtagttacacttattactgatattgggtttgaattgcaccattggtagttggaa |
33824596 |
T |
|
| Q |
101 |
gatcagaccaagtaagggttggaattggattccagtaccctaattcaccaccagtaactgaagttgtctccaaaatgttggatatagacgaagaatttga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33824595 |
gatcagaccaagtaagggttggaattggattccagtaccctaattcaccaccagtaactgaagttgtctccaaaatgttggatatagacgaagaatttga |
33824496 |
T |
|
| Q |
201 |
agccgcgttccctagtaataccgttggtgaagatgaaatatcaccaacactgttactagggaaagttgttgatgaccttagtttctggtacagttcttgg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33824495 |
agccgcgttccctagtaataccgttggtgaagatgaaatatcaccaacactgttactagggaaagttgttgatgaccttagtttctggtacagttcttgg |
33824396 |
T |
|
| Q |
301 |
attccactgttttgatgatgctgatgttgttgatccccaagtacaaatccaccattttgtaattgttgagtttgattatcatgattgtttctccaaaatg |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33824395 |
attccactgttttgatgatgctgatgttgttgatccccaagtacaaatccaccattttgtaattgttgagtttgattatcatgattgtttctccaaaatg |
33824296 |
T |
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| Q |
401 |
ggttgcataaaacatgtccaacaccatcataaccatttgacgaaatcaacggctgagaactcatcatgtg |
470 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33824295 |
ggttgcataaaacatgtccaacaccatcataaccatttgacgaaatcaacggctgagaactcatcatgtg |
33824226 |
T |
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