View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4752_low_10 (Length: 417)
Name: NF4752_low_10
Description: NF4752
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4752_low_10 |
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Alignment Details
Target: chr6 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 55 - 402
Target Start/End: Original strand, 18273741 - 18274088
Alignment:
| Q |
55 |
gtggttccttacttacatttggtgatggataagtctatacagaatttgggtgatgttgttcctggtagaaacgctgatgcctggagatttgttgttcgag |
154 |
Q |
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| T |
18273741 |
gtggttccttacttacatttggtgatggataagtctatacataatttggatgatgttgttcctggtagaaacgctgatgcctggagatttgttgttcgag |
18273840 |
T |
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| Q |
155 |
ttattaggttgtgggaagttccattgtttacctctattgaaatggtgcttattgatcaaaatggggtgaaaatacatgctactattcccaagcagttgat |
254 |
Q |
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| T |
18273841 |
ttattaggttgtgggaagttccattgtttacctctattgaaatggtgcttattgatcaaaacggggtgaaaatacatgctactattcccaagcagttgat |
18273940 |
T |
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| Q |
255 |
gtatctttttcagcacaaattgattgagggaaaagtttacaagttatcaaactttactgtattgcgaaactctggttcttataggaccacgcatcataca |
354 |
Q |
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| T |
18273941 |
gtatctttttcagcacaaattgattgagggaaaagtttacaagttatcaaactttactgtcttgctaaactctggtgcttataggactacgcatcataca |
18274040 |
T |
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| Q |
355 |
tacaaactaatattccaaatgaaaactaaggtggaggagtctcatgat |
402 |
Q |
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| T |
18274041 |
tacaaactaatattccaaatgaaaactaaggtggaggagtcccatgat |
18274088 |
T |
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