View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4752_low_31 (Length: 241)
Name: NF4752_low_31
Description: NF4752
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4752_low_31 |
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Alignment Details
Target: chr8 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 36 - 222
Target Start/End: Complemental strand, 44270992 - 44270807
Alignment:
| Q |
36 |
ttattaaatacagatgtagtagttagaagaatatattgttgagtcaaaaaagaagaaaatattatagttattatgagtgtggtttccatgcaataagtat |
135 |
Q |
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| T |
44270992 |
ttattaaataaagatgtagtagttagaagaatatattgttgagtcaaaaaagaagaaaatattgtagttattatgagtgtggtttccatgcaataagtat |
44270893 |
T |
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| Q |
136 |
atgatctgttttagtacgtagtaggtaaaaccaataccatatattttgggttttaaatgacttaacttggagtcaatcatcacacca |
222 |
Q |
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| T |
44270892 |
atgatctgttttagtacgtagtaggtaaaaccaataccatat-ttttgggttttaaatggcttaacttggagtcaatcatcacacca |
44270807 |
T |
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