View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4753-Insertion-8 (Length: 763)

Name: NF4753-Insertion-8
Description: NF4753
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4753-Insertion-8
NF4753-Insertion-8
[»] chr7 (1 HSPs)
chr7 (38-763)||(27680018-27680731)


Alignment Details
Target: chr7 (Bit Score: 483; Significance: 0; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 483; E-Value: 0
Query Start/End: Original strand, 38 - 763
Target Start/End: Complemental strand, 27680731 - 27680018
Alignment:
Q  38 gagttggtaatttaaatttaggataggctacaaggtagatgaatgnnnnnnnnnngttaaccttatgatttttaagagaagagatctgataatttaaaat 137  Q
    ||||||||||||||||||||| |||||||||||||||||||||||          ||||||||| |||||||||||||||||||||| ||||||||||||    
T  27680731 gagttggtaatttaaatttagaataggctacaaggtagatgaatgtttttttt--gttaaccttctgatttttaagagaagagatctaataatttaaaat 27680634  T
Q  138 tcggctgttagtatataatctagatgaatgannnnnnnnnnnnnnngaagggtactaactaattagnnnnnnnnnnnngtcaaaaaactaatattccttg 237  Q
    |||| ||| ||||||||||| ||||||||||               ||||||||||||||||||||            ||||||||| ||||||||||||    
T  27680633 tcggttgtaagtatataatccagatgaatgattttttttttt----gaagggtactaactaattagttttttt-----gtcaaaaaattaatattccttg 27680543  T
Q  238 taaaaaatttgaaattcatattacatnnnnnnnnnnnnnnnnttgaaatttaagtgagtagtt-aatttatttattccactactgttggtactggtgacc 336  Q
    ||||||||||||||||||||||||||                ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27680542 taaaaaatttgaaattcatattacataaaaaaaaaaaaaa--ttgaaatttaagtgagtagtttaatttatttattccactactgttggtactggtgacc 27680445  T
Q  337 acaactattttctatttggaaaacatgacctgtcaaaatcttgtcatacttggtggaggcaatctttgtttagacatattttcttctgtcatcctattat 436  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27680444 acaactattttctatttggaaaacatgacctgtcagaatcttgtcatacttggtggaggcaatctttgtttagacatattttcttctgtcatcctattat 27680345  T
Q  437 tttggaaataaagcattgttagttgggatcattgttctctcatttacttgcataatttaggtcatatcctttttcacttgaccaagttaatgtttaattt 536  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27680344 tttggaaataaagcattgttagttgggatcattgttctctcatttacttgcataatttaggtcatatcctttttcacttgaccaagttaatgtttaattt 27680245  T
Q  537 tccaaacaattaagttgaaaataatcatatgcaaggaatttaattttggtcccattctggtagcnnnnnnncttcttcaaattattgctgttttctcccc 636  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||       |||||||||||||||||||||||||||||    
T  27680244 tccaaacaattaagttgaaaataatcatatgcaaggaatttaattttggtcccattttggtagctttttttcttcttcaaattattgctgttttctcccc 27680145  T
Q  637 tttgtttatattggtattttcaatgcatacttgatatgcaagagaagggaagggatcaaaagcaaggacaaaaaccaaaagaaaacgttgtattatttag 736  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27680144 tttgtttatattggtattttcaatgcatacttgatatgcaagagaagggaagggatcaaaagcaaggacaaaaaccaaaagaaaacgttgtattatttag 27680045  T
Q  737 tatattattgcataaaacatcttagga 763  Q
    |||||||||||||||||||||||||||    
T  27680044 tatattattgcataaaacatcttagga 27680018  T

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