View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4753_high_11 (Length: 336)

Name: NF4753_high_11
Description: NF4753
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4753_high_11
NF4753_high_11
[»] chr4 (6 HSPs)
chr4 (118-281)||(759004-759167)
chr4 (1-61)||(758888-758947)
chr4 (180-281)||(18506181-18506282)
chr4 (199-281)||(12627152-12627234)
chr4 (182-264)||(19184273-19184354)
chr4 (199-281)||(31174049-31174131)
[»] chr3 (7 HSPs)
chr3 (140-281)||(36987487-36987628)
chr3 (140-281)||(37012926-37013067)
chr3 (199-281)||(8332457-8332539)
chr3 (199-281)||(24498038-24498120)
chr3 (1-61)||(36988430-36988487)
chr3 (1-61)||(37013869-37013926)
chr3 (177-273)||(53481899-53481994)
[»] chr6 (3 HSPs)
chr6 (201-281)||(30437993-30438073)
chr6 (199-277)||(1867665-1867743)
chr6 (205-281)||(14713553-14713629)
[»] chr1 (2 HSPs)
chr1 (199-281)||(1427031-1427113)
chr1 (228-281)||(41884534-41884587)
[»] chr5 (4 HSPs)
chr5 (199-281)||(22584913-22584995)
chr5 (199-281)||(16185799-16185881)
chr5 (232-281)||(37834764-37834813)
chr5 (181-281)||(5476605-5476704)
[»] chr2 (6 HSPs)
chr2 (203-281)||(21201820-21201898)
chr2 (199-281)||(21202052-21202134)
chr2 (199-259)||(35429482-35429542)
chr2 (240-281)||(35116631-35116672)
chr2 (248-281)||(35429676-35429709)
chr2 (120-160)||(19182003-19182043)
[»] scaffold0638 (1 HSPs)
scaffold0638 (228-281)||(7803-7856)
[»] chr8 (3 HSPs)
chr8 (226-281)||(2834432-2834487)
chr8 (199-277)||(22957185-22957263)
chr8 (199-281)||(38188501-38188583)
[»] chr7 (3 HSPs)
chr7 (199-281)||(8526130-8526212)
chr7 (199-281)||(37925509-37925591)
chr7 (199-257)||(46178746-46178804)
[»] scaffold0024 (1 HSPs)
scaffold0024 (199-281)||(70341-70424)


Alignment Details
Target: chr4 (Bit Score: 156; Significance: 7e-83; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 118 - 281
Target Start/End: Original strand, 759004 - 759167
Alignment:
Q  118 ggtcattcaatgttttcattttatgtttagttggtaaggagtttagtcataagtaaagtgaacaagtcttacttaaatacaaaatacaaatgaaaaatgt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  759004 ggtcattcaatgttttcattttatgtttagttggtaaggagtttagtcataagtaaagtgagcaagtcttacttaaacacaaaatacaaatgaaaaatgt 759103  T
Q  218 ttagtcacattcacataaatgtagaaaaataaataagaaagaatttaatcacatcattcaatta 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  759104 ttagtcacattcacataaatgtagaaaaataaataagaaagaatttaatcacatcattcaatta 759167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 758888 - 758947
Alignment:
Q  1 tgaataatagacaagggtaaaaggaaatgaaagtataataataagttccttgcaaactcac 61  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  758888 tgaataatagaca-gggtaaaaggaaatgaaagtataataataagttccttgcaaactcac 758947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 281
Target Start/End: Original strand, 18506181 - 18506282
Alignment:
Q  180 caagtcttacttaaatacaaaatacaaatgaaaa-atgtttagtcacattcacataaatgtagaaaaataaataagaaagaatttaatcacatcattcaa 278  Q
    |||||||||||| |||||||| |  ||||||||| |||||||  |||| || ||||||| ||||||||||| | |||||||||||| |||||||||||||    
T  18506181 caagtcttacttgaatacaaa-tctaaatgaaaaaatgtttaagcacactctcataaatatagaaaaataattgagaaagaatttagtcacatcattcaa 18506279  T
Q  279 tta 281  Q
    |||    
T  18506280 tta 18506282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 281
Target Start/End: Complemental strand, 12627234 - 12627152
Alignment:
Q  199 aaatacaaatgaaaaatgtttagtcacattcacataaatgtagaaaaataaataagaaagaatttaatcacatcattcaatta 281  Q
    ||||||||||||| ||||||| |  ||| |||||| |||| |||||||||||| ||||| |||  | ||||||||||||||||    
T  12627234 aaatacaaatgaataatgtttgggtacactcacatgaatggagaaaaataaatgagaaaaaatcaagtcacatcattcaatta 12627152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 264
Target Start/End: Original strand, 19184273 - 19184354
Alignment:
Q  182 agtcttacttaaatacaaaatacaaatgaaaaatgtttagtcacattcacataaatgtagaaaaataaataagaaagaattta 264  Q
    |||||||||| || ||||| || |||||||| |||||| | |||| ||||||||||| || ||||||||| ||||||||||||    
T  19184273 agtcttacttgaacacaaa-tataaatgaaatatgtttgggcacactcacataaatggagtaaaataaatgagaaagaattta 19184354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 281
Target Start/End: Original strand, 31174049 - 31174131
Alignment:
Q  199 aaatacaaatgaaaaatgtttagtcacattcacataaatgtagaaaaataaataagaaagaatttaatcacatcattcaatta 281  Q
    ||||||||||  |||||||||   |||||||| ||| ||| |||||||||||| ||||| |||||||| | ||| ||||||||    
T  31174049 aaatacaaattgaaaatgtttgagcacattcatatatatggagaaaaataaatgagaaaaaatttaattagatctttcaatta 31174131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 118; Significance: 4e-60; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 140 - 281
Target Start/End: Complemental strand, 36987628 - 36987487
Alignment:
Q  140 atgtttagttggtaaggagtttagtcataagtaaagtgaacaagtcttacttaaatacaaaatacaaatgaaaaatgtttagtcacattcacataaatgt 239  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  36987628 atgtttagttggtaaggagtttagtcataattaaagtgagcaagtcttacttaaacacaaaatagaaatgaaaaatgtttagccacattcacataaatgt 36987529  T
Q  240 agaaaaataaataagaaagaatttaatcacatcattcaatta 281  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  36987528 agaaaaataaataagaaataatttaatcacatcattcaatta 36987487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 140 - 281
Target Start/End: Complemental strand, 37013067 - 37012926
Alignment:
Q  140 atgtttagttggtaaggagtttagtcataagtaaagtgaacaagtcttacttaaatacaaaatacaaatgaaaaatgtttagtcacattcacataaatgt 239  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  37013067 atgtttagttggtaaggagtttagtcataattaaagtgagcaagtcttacttaaacacaaaatagaaatgaaaaatgtttagccacattcacataaatgt 37012968  T
Q  240 agaaaaataaataagaaagaatttaatcacatcattcaatta 281  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  37012967 agaaaaataaataagaaataatttaatcacatcattcaatta 37012926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 199 - 281
Target Start/End: Original strand, 8332457 - 8332539
Alignment:
Q  199 aaatacaaatgaaaaatgtttagtcacattcacataaatgtagaaaaataaataagaaagaatttaatcacatcattcaatta 281  Q
    ||||| ||||||||||||||||| |||| ||||||||||  |||||||||||| ||||| |||||||||||||||||||||||    
T  8332457 aaatataaatgaaaaatgtttaggcacactcacataaatagagaaaaataaatgagaaaaaatttaatcacatcattcaatta 8332539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 199 - 281
Target Start/End: Complemental strand, 24498120 - 24498038
Alignment:
Q  199 aaatacaaatgaaaaatgtttagtcacattcacataaatgtagaaaaataaataagaaagaatttaatcacatcattcaatta 281  Q
    ||||||||||||||||||||| | ||||||||||| |||| |||||||||||| ||||  |||||| ||| ||||||||||||    
T  24498120 aaatacaaatgaaaaatgtttggacacattcacatgaatgaagaaaaataaatgagaataaatttagtcagatcattcaatta 24498038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 36988487 - 36988430
Alignment:
Q  1 tgaataatagacaagggtaaaaggaaatgaaagtataataataagttccttgcaaactcac 61  Q
    |||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||    
T  36988487 tgaataatagacaagggtaaaaggaaatgaaagtata---ataagttccttgcaaactcac 36988430  T

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Target: chr3; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 37013926 - 37013869
Alignment:
Q  1 tgaataatagacaagggtaaaaggaaatgaaagtataataataagttccttgcaaactcac 61  Q
    |||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||    
T  37013926 tgaataatagacaagggtaaaaggaaatgaaagtata---ataagttccttgcaaactcac 37013869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 177 - 273
Target Start/End: Original strand, 53481899 - 53481994
Alignment:
Q  177 gaacaagtcttacttaaatacaaaatacaaatgaaaaatgtttagtcacattcacataaatgtagaaaaataaataagaaagaatttaatcacatca 273  Q
    |||||||||||| ||||| ||||| ||||||| |||||||||||  |||| | |||||||| || |||| ||||||| |||||||||| | ||||||    
T  53481899 gaacaagtcttatttaaacacaaa-tacaaataaaaaatgtttaaacacacttacataaatataaaaaattaaataaaaaagaatttagtgacatca 53481994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 281
Target Start/End: Complemental strand, 30438073 - 30437993
Alignment:
Q  201 atacaaatgaaaaatgtttagtcacattcacataaatgtagaaaaataaataagaaagaatttaatcacatcattcaatta 281  Q
    |||||||| |||||| ||||| |||| ||||||||||| |||||||||||| | |||||||||| ||||||||||| ||||    
T  30438073 atacaaataaaaaatatttagacacactcacataaatgaagaaaaataaatgaaaaagaatttagtcacatcattcgatta 30437993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 277
Target Start/End: Complemental strand, 1867743 - 1867665
Alignment:
Q  199 aaatacaaatgaaaaatgtttagtcacattcacataaatgtagaaaaataaataagaaagaatttaatcacatcattca 277  Q
    ||||| |||||||| |||||| | |||| ||||||||||| |||||||||||| ||||| |||||| ||| ||||||||    
T  1867743 aaatataaatgaaatatgtttggacacactcacataaatggagaaaaataaatgagaaataatttagtcaaatcattca 1867665  T

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Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 14713553 - 14713629
Alignment:
Q  205 aaatgaaaaatgtttagtcacattcacataaatgtagaaaaataaataagaaagaatttaatcacatcattcaatta 281  Q
    |||||||||||||||||  | |||  ||||||||||| ||||||||| | |||||||||| |||| ||||| |||||    
T  14713553 aaatgaaaaatgtttagctatattttcataaatgtagtaaaataaatgaaaaagaatttagtcacttcatttaatta 14713629  T

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Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 281
Target Start/End: Complemental strand, 1427113 - 1427031
Alignment:
Q  199 aaatacaaatgaaaaatgtttagtcacattcacataaatgtagaaaaataaataagaaagaatttaatcacatcattcaatta 281  Q
    ||||||||||||||||||||| | || ||||||||||||| |||||||||||| ||||| | || | ||| ||||||||||||    
T  1427113 aaatacaaatgaaaaatgtttgggcatattcacataaatggagaaaaataaatgagaaaaagttaagtcatatcattcaatta 1427031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 281
Target Start/End: Original strand, 41884534 - 41884587
Alignment:
Q  228 tcacataaatgtagaaaaataaataagaaagaatttaatcacatcattcaatta 281  Q
    ||||||||||| || ||||||||| |||||||||||| ||| || |||||||||    
T  41884534 tcacataaatgaagcaaaataaatgagaaagaatttagtcaaattattcaatta 41884587  T

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Target: chr5 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 281
Target Start/End: Complemental strand, 22584995 - 22584913
Alignment:
Q  199 aaatacaaatgaaaaatgtttagtcacattcacataaatgtagaaaaataaataagaaagaatttaatcacatcattcaatta 281  Q
    ||||||||||||||||| ||||   ||||| | ||||||| |||||||||||| ||||||||| || | ||||||||||||||    
T  22584995 aaatacaaatgaaaaatatttaagtacatttatataaatgaagaaaaataaatgagaaagaatctagttacatcattcaatta 22584913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 281
Target Start/End: Complemental strand, 16185881 - 16185799
Alignment:
Q  199 aaatacaaatgaaaaatgtttagtcacattcacataaatgtagaaaaataaataagaaagaatttaatcacatcattcaatta 281  Q
    ||||| ||||||||  ||||| | || | ||||||||||| || |||||||||||||||||||||||| | |||||| |||||    
T  16185881 aaatataaatgaaatgtgtttgggcatactcacataaatggagtaaaataaataagaaagaatttaataaaatcatttaatta 16185799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 281
Target Start/End: Original strand, 37834764 - 37834813
Alignment:
Q  232 ataaatgtagaaaaataaataagaaagaatttaatcacatcattcaatta 281  Q
    ||||||||| |||||||||| |||||||||||  ||||||||||||||||    
T  37834764 ataaatgtaaaaaaataaatgagaaagaatttcgtcacatcattcaatta 37834813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 281
Target Start/End: Complemental strand, 5476704 - 5476605
Alignment:
Q  181 aagtcttacttaaatacaaaatacaaatgaaaaatgtttagtcacattcacataaatgtagaaaaataaat-aagaaagaatttaatcacatcattcaat 279  Q
    ||||||||| |||||||||  |||| ||||| ||||||| | |||| |||||| |||| |||||||||||| || ||| |||  | ||||||||||||||    
T  5476704 aagtcttacctaaatacaa--tacacatgaataatgtttgggcacactcacatgaatggagaaaaataaatgaaaaaaaaatcaagtcacatcattcaat 5476607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 203 - 281
Target Start/End: Original strand, 21201820 - 21201898
Alignment:
Q  203 acaaatgaaaaatgtttagtcacattcacataaatgtagaaaaataaataagaaagaatttaatcacatcattcaatta 281  Q
    |||||| |||||||||| | |||| |||||| || | |||||||||||| ||||| |||||| ||||||||||||||||    
T  21201820 acaaataaaaaatgtttgggcacactcacatcaaaggagaaaaataaatgagaaaaaatttagtcacatcattcaatta 21201898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 281
Target Start/End: Complemental strand, 21202134 - 21202052
Alignment:
Q  199 aaatacaaatgaaaaatgtttagtcacattcacataaatgtagaaaaataaataagaaagaatttaatcacatcattcaatta 281  Q
    |||||||||| |||||||||| | |||| |||||| || | |||||||||||| | ||| |||||| ||||||||||||||||    
T  21202134 aaatacaaataaaaaatgtttgggcacactcacatcaaaggagaaaaataaatgacaaaaaatttagtcacatcattcaatta 21202052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 199 - 259
Target Start/End: Original strand, 35429482 - 35429542
Alignment:
Q  199 aaatacaaatgaaaaatgtttagtcacattcacataaatgtagaaaaataaataagaaaga 259  Q
    |||||||||| |||||| |||||  ||| |||||||||||||||||||||||| |||||||    
T  35429482 aaatacaaataaaaaatatttaggtacactcacataaatgtagaaaaataaatgagaaaga 35429542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 281
Target Start/End: Complemental strand, 35116672 - 35116631
Alignment:
Q  240 agaaaaataaataagaaagaatttaatcacatcattcaatta 281  Q
    ||||||| |||| |||||||||||| ||||||||||||||||    
T  35116672 agaaaaacaaatgagaaagaatttagtcacatcattcaatta 35116631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 281
Target Start/End: Original strand, 35429676 - 35429709
Alignment:
Q  248 aaataagaaagaatttaatcacatcattcaatta 281  Q
    |||| |||||||||||||||||||||||||||||    
T  35429676 aaatgagaaagaatttaatcacatcattcaatta 35429709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 120 - 160
Target Start/End: Original strand, 19182003 - 19182043
Alignment:
Q  120 tcattcaatgttttcattttatgtttagttggtaaggagtt 160  Q
    ||||||||| |||| |||||||||||||||| |||||||||    
T  19182003 tcattcaatatttttattttatgtttagttgataaggagtt 19182043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 7856 - 7803
Alignment:
Q  228 tcacataaatgtagaaaaataaataagaaagaatttaatcacatcattcaatta 281  Q
    |||||||||||  ||||||||||| |||||||||||| ||||||||||||||||    
T  7856 tcacataaatggcgaaaaataaatgagaaagaatttagtcacatcattcaatta 7803  T

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Target: chr8 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 2834432 - 2834487
Alignment:
Q  226 attcacataaatgtagaaaaataaataagaaagaatttaatcacatcattcaatta 281  Q
    |||||||| |||| ||||||||| || |||||||||||| ||||||||||||||||    
T  2834432 attcacatgaatgaagaaaaatatatgagaaagaatttagtcacatcattcaatta 2834487  T

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Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 277
Target Start/End: Complemental strand, 22957263 - 22957185
Alignment:
Q  199 aaatacaaatgaaaaatgtttagtcacattcacataaatgtagaaaaataaataagaaagaatttaatcacatcattca 277  Q
    ||||| ||||||||||||||| | |||| |||||| |||| |||||||||||| | ||  |||||| ||||||||||||    
T  22957263 aaatagaaatgaaaaatgtttggacacactcacatgaatgaagaaaaataaatcataataaatttagtcacatcattca 22957185  T

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Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 281
Target Start/End: Complemental strand, 38188583 - 38188501
Alignment:
Q  199 aaatacaaatgaaaaatgtttagtcacattcacataaatgtagaaaaataaataagaaagaatttaatcacatcattcaatta 281  Q
    ||||| |||| ||||| |||| | |||| |||||||| |  |||||||||||||  |||||||||| ||| ||||||||||||    
T  38188583 aaatataaataaaaaaagtttgggcacactcacataattagagaaaaataaatagaaaagaatttagtcatatcattcaatta 38188501  T

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Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 281
Target Start/End: Complemental strand, 8526212 - 8526130
Alignment:
Q  199 aaatacaaatgaaaaatgtttagtcacattcacataaatgtagaaaaataaataagaaagaatttaatcacatcattcaatta 281  Q
    ||||| |||| |||| ||||||  ||||||||| |||||| ||||||| |||| | ||| ||||||||||||||||| |||||    
T  8526212 aaatataaataaaaagtgtttaaacacattcacgtaaatggagaaaaacaaatgaaaaaaaatttaatcacatcatttaatta 8526130  T

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Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 281
Target Start/End: Original strand, 37925509 - 37925591
Alignment:
Q  199 aaatacaaatgaaaaatgtttagtcacattcacataaatgtagaaaaataaataagaaagaatttaatcacatcattcaatta 281  Q
    |||||||||| || ||||||| | |||| ||||||||||| |||||||||||| |||||  ||  | ||||||||||||||||    
T  37925509 aaatacaaattaataatgtttgggcacactcacataaatggagaaaaataaatgagaaaacatcaagtcacatcattcaatta 37925591  T

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Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 46178746 - 46178804
Alignment:
Q  199 aaatacaaatgaaaaatgtttagtcacattcacataaatgtagaaaaataaataagaaa 257  Q
    ||||||||||||||||||||| | |||| ||||||||||  |||||||||||| |||||    
T  46178746 aaatacaaatgaaaaatgtttgggcacactcacataaatagagaaaaataaatgagaaa 46178804  T

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Target: scaffold0024 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 281
Target Start/End: Original strand, 70341 - 70424
Alignment:
Q  199 aaatacaaatgaaaaatgtttagtcacattcacataaatgtagaaaaataaataag-aaagaatttaatcacatcattcaatta 281  Q
    |||||||||||||||||| |||| |||| |||||| |||| | |||||||||| || ||| |||||| || ||| |||||||||    
T  70341 aaatacaaatgaaaaatgcttaggcacactcacatgaatggaaaaaaataaatgagaaaaaaatttagtcgcattattcaatta 70424  T

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