View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4753_high_6 (Length: 438)
Name: NF4753_high_6
Description: NF4753
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4753_high_6 |
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Alignment Details
Target: chr3 (Bit Score: 369; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 24 - 428
Target Start/End: Complemental strand, 45075185 - 45074781
Alignment:
| Q |
24 |
gcatttgcctgtgcccaaatataaattgatccttaaactgttgacaaataaagcaaagctagaacactaatccacacactatcatttagatacgagtcag |
123 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45075185 |
gcatttgcctgtgcccaaatatcaattgatccttaaactgttgacaaataaagtaaagctagaacactaatccacacactatcatttagatacgagtcag |
45075086 |
T |
|
| Q |
124 |
gaggatcttctcatttttccaacagattcaactagctaaatgaagacttacaagcacaaacaaattatgcattggaataagaattctgtttggacttgaa |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45075085 |
gaggatcttctcatttttccaacagattcaactagctaaatgaagacttacaagcacaaacaaattatgcattggaataagaattctgtttggacttgaa |
45074986 |
T |
|
| Q |
224 |
tatttatacaactatataagacacatttccttgccaagtgcataacaaaacgatcaagatggagctaacaaatccaagaaaagttcccaaattcttctaa |
323 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
45074985 |
catttatacaactatataagacacatttccttgccaagtgcataacaaaaccataaagatggagctaacaaatccaagaaaagttgccaaattcttctaa |
45074886 |
T |
|
| Q |
324 |
taatgcaatatatgttcatagggtacaaacccaggcattcatagcaatatactaaacagttgttttgtcgttcttcttagactctttctttcgcttcatc |
423 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |
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| T |
45074885 |
taatgcaatatatgttcatagggtacgaacccaggcattcatagcaatatactaaacagttgttttgtcattcttcttagactctttctttcgcttcttc |
45074786 |
T |
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| Q |
424 |
tcatt |
428 |
Q |
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||||| |
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| T |
45074785 |
tcatt |
45074781 |
T |
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