View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4753_high_9 (Length: 401)
Name: NF4753_high_9
Description: NF4753
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4753_high_9 |
 | |
|
| [»] scaffold0006 (7 HSPs) |
| | |
|
| [»] scaffold0012 (1 HSPs) |
| | |
|
| [»] scaffold0069 (2 HSPs) |
| | |
|
| [»] scaffold0460 (2 HSPs) |
| | |
|
| [»] scaffold0068 (2 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 275; Significance: 1e-154; HSPs: 13)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 14 - 372
Target Start/End: Original strand, 13596132 - 13596490
Alignment:
| Q |
14 |
tactcaattgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgat |
113 |
Q |
| |
|
||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
13596132 |
tactcaattgaagaaattaaaactatctaatcttccaaaactgaagcatgtatggaaaaaggatccacattacactatgaagtttgaaaatttaagtgat |
13596231 |
T |
|
| Q |
114 |
gtatctgttgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtggga |
213 |
Q |
| |
|
||||||||||||| |||| | |||||| ||||||||||||| |||||||| ||||||||||||| |||||||||||||||| | ||||||||||||||| |
|
|
| T |
13596232 |
gtatctgttgtgggatgccatagcttgataagcctctttccgctctcagtggctagagatatgatgcaacttcaaagtcttcaagtaagtaactgtggga |
13596331 |
T |
|
| Q |
214 |
ttgatgaaattgttgtcaaggaagaaggaacagatgagatggttaaatttgtgtttcctcatttgacttccattaaacttgaatacttgaccaaatttaa |
313 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||| |||| |
|
|
| T |
13596332 |
ttgatgaaattgttgtcaaggaagaaggaacagatgagatggttaaatttgtgtttcctcatttgacttccattaaccttaagtacttgaccaaacttaa |
13596431 |
T |
|
| Q |
314 |
ggcattctttgttggggttcattctcttcaatgtaaatcattgaaaaagataaagttgt |
372 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |
|
|
| T |
13596432 |
ggcattctttgttggggttcattctcttcaatgtaaatcattgaaaacgatcaagttgt |
13596490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 14 - 382
Target Start/End: Original strand, 13677293 - 13677661
Alignment:
| Q |
14 |
tactcaattgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgat |
113 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
13677293 |
tactcaattgaagaaattaaaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgtt |
13677392 |
T |
|
| Q |
114 |
gtatctgttgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtggga |
213 |
Q |
| |
|
|||||||||| ||| |||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
13677393 |
gtatctgttgcggattgcaaaagcttgataagcctctttccactctcagtggctagagatatgatgcaacttcaaagtcttcttgtaagtaactgtggga |
13677492 |
T |
|
| Q |
214 |
ttgatgaaattgttgtcaaggaagaaggaacagatgagatggttaaatttgtgtttcctcatttgacttccattaaacttgaatacttgaccaaatttaa |
313 |
Q |
| |
|
|||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| |||| |
|
|
| T |
13677493 |
ttgaagaaattgttgtcaaggaagaaggaccagatgagatggttaaatttgtgtttcctcatttgacttccattgaacttgataatttgaccaaacttaa |
13677592 |
T |
|
| Q |
314 |
ggcattctttgttggggttcattctcttcaatgtaaatcattgaaaaagataaagttgtatgaatgtcc |
382 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||| || ||||||| | ||||||| |
|
|
| T |
13677593 |
agcattctttgttggggtccattctcttcaatgtaaatcattgaaaaccatcaagttgtttaaatgtcc |
13677661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 14 - 360
Target Start/End: Original strand, 13552397 - 13552743
Alignment:
| Q |
14 |
tactcaattgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgat |
113 |
Q |
| |
|
||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
13552397 |
tactcaattgaagaaattaaaactatctaatcttccaaaactgaagcatgtatggaaaaaggatccacattacactatgaagtttgaaaatttaagtgat |
13552496 |
T |
|
| Q |
114 |
gtatctgttgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtggga |
213 |
Q |
| |
|
||||||||||||| |||||| |||||| ||||||||||||| |||||||| ||||||||||||| |||||||||||||||| | ||||| | ||||||| |
|
|
| T |
13552497 |
gtatctgttgtgggatgcaatagcttgataagcctctttccgctctcagtggctagagatatgatgcaacttcaaagtcttcaagtaagtcagtgtggga |
13552596 |
T |
|
| Q |
214 |
ttgatgaaattgttgtcaaggaagaaggaacagatgagatggttaaatttgtgtttcctcatttgacttccattaaacttgaatacttgaccaaatttaa |
313 |
Q |
| |
|
|| | |||||||| | ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||| |||| |
|
|
| T |
13552597 |
ttcaagaaattgtggccaaggaagaagaaacatatgagatggttaaatttgtgtttcctcatttgacttccattaaccttaagtacttgaccaaacttaa |
13552696 |
T |
|
| Q |
314 |
ggcattctttgttggggttcattctcttcaatgtaaatcattgaaaa |
360 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13552697 |
ggcattctttgttggggttcattctcttcaatgtaaatcattgaaaa |
13552743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 17 - 360
Target Start/End: Original strand, 20377588 - 20377931
Alignment:
| Q |
17 |
tcaattgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgta |
116 |
Q |
| |
|
|||| ||||||||||| ||||||| |||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
20377588 |
tcaactgaagaaattaaaactatctaatcttccaaaactgaggcatgtatggaaggaggatccacataacactatgaggtttcaaaatttaagtgatgta |
20377687 |
T |
|
| Q |
117 |
tctgttgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattg |
216 |
Q |
| |
|
|| ||||||| |||||| |||||| |||||||||||||||| ||||||||||||||| ||| |||||||||| ||||| | ||| ||| ||||||||| |
|
|
| T |
20377688 |
tccgttgtgggatgcaatagcttgataagcctctttccactttcagtagctagagatgtgatgcaacttcaaaatcttcaagtaattaaatgtgggattc |
20377787 |
T |
|
| Q |
217 |
atgaaattgttgtcaaggaagaaggaacagatgagatggttaaatttgtgtttcctcatttgacttccattaaacttgaatacttgaccaaatttaaggc |
316 |
Q |
| |
|
| ||||| |||| || |||||| ||| ||||||||||||||||||||||||||||||||||||| | |||||||||| | || ||||||||| | ||||| |
|
|
| T |
20377788 |
aagaaatcgttgccagggaagatggaccagatgagatggttaaatttgtgtttcctcatttgacattcattaaacttcattatttgaccaaactgaaggc |
20377887 |
T |
|
| Q |
317 |
attctttgttggggttcattctcttcaatgtaaatcattgaaaa |
360 |
Q |
| |
|
||||||||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
20377888 |
attctttgttggggtccattctcttcaatgcaaatcattgaaaa |
20377931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 22 - 360
Target Start/End: Complemental strand, 20510994 - 20510656
Alignment:
| Q |
22 |
tgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgt |
121 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||||| |||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||| || |
|
|
| T |
20510994 |
tgaagaaattaaaactatctaatcttccaaaactgaggcatgtatggaaggaggatccacataacactatggggtttcaaaatttaagtgatgtatacgt |
20510895 |
T |
|
| Q |
122 |
tgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaa |
221 |
Q |
| |
|
||||| |||||| |||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||| | ||| ||| ||||||||| | ||| |
|
|
| T |
20510894 |
tgtggtatgcaatagcttgataagcctctttccactttcagtagctagagatatgatgcaacttcaaagtcttcaagtaattaaatgtgggattcaagaa |
20510795 |
T |
|
| Q |
222 |
attgttgtcaaggaagaaggaacagatgagatggttaaatttgtgtttcctcatttgacttccattaaacttgaatacttgaccaaatttaaggcattct |
321 |
Q |
| |
|
||||||| ||||||||| ||| |||||||||||||||| |||||||||||||||||||| | |||||||||| | | ||||||||| | |||||||||| |
|
|
| T |
20510794 |
attgttgccaaggaagatggaccagatgagatggttaattttgtgtttcctcatttgacattcattaaacttcataatttgaccaaactgaaggcattct |
20510695 |
T |
|
| Q |
322 |
ttgttggggttcattctcttcaatgtaaatcattgaaaa |
360 |
Q |
| |
|
|||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
20510694 |
ttgttggggtccattctcttcaatgcaaatcattgaaaa |
20510656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 16 - 364
Target Start/End: Original strand, 13516923 - 13517271
Alignment:
| Q |
16 |
ctcaattgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgt |
115 |
Q |
| |
|
||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
13516923 |
ctcaactgaagaaattaaaactatctaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgcggtttcaaaatttaagtgatgt |
13517022 |
T |
|
| Q |
116 |
atctgttgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggatt |
215 |
Q |
| |
|
|||||| |||| |||||||| |||| ||| |||||||||||||||||| | || || |||| |||||||||||||||||| ||||||| ||||| || |
|
|
| T |
13517023 |
atctgtggtgggatgcaaaaacttgataaacctctttccactctcagtggttaaaggtatgttgcaacttcaaagtcttcgagtaagtaaatgtggcatc |
13517122 |
T |
|
| Q |
216 |
gatgaaattgttgtcaaggaagaaggaacagatgagatggttaaatttgtgtttcctcatttgacttccattaaacttgaatacttgaccaaatttaagg |
315 |
Q |
| |
|
| |||||||||| ||||||||| |||||||| ||||| ||||||||||||||||| || || || ||||||| ||||||| | ||| | ||| |||||| |
|
|
| T |
13517123 |
caagaaattgttgccaaggaagatggaacagaagagatagttaaatttgtgtttccacaattaacatccattatacttgaacatttgccaaaacttaagg |
13517222 |
T |
|
| Q |
316 |
cattctttgttggggttcattctcttcaatgtaaatcattgaaaaagat |
364 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
13517223 |
cattctttgttggggtccattctcttcaatgtaaatcattgaaaaagat |
13517271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 10 - 360
Target Start/End: Complemental strand, 15896229 - 15895879
Alignment:
| Q |
10 |
attatactcaattgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaag |
109 |
Q |
| |
|
|||||| |||||||||||||||| ||||||| ||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
15896229 |
attatagtcaattgaagaaattaaaactatctaatcttccaaaactgaaacatgtatggaaggaggacccacattacactatgaggtttcaaaatttaag |
15896130 |
T |
|
| Q |
110 |
tgatgtatctgttgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgt |
209 |
Q |
| |
|
||||||||||||||||||| |||||||| |||||||||||||||||||||| | ||||||||||| |||||||||||||||||| ||||||| ||| |
|
|
| T |
15896129 |
ctatgtatctgttgtggaatgtgaaagcttgataagcctctttccactctcagtgggtagagatatgatgcaacttcaaagtcttcgagtaagtaagtgt |
15896030 |
T |
|
| Q |
210 |
gggattgatgaaattgttgtcaaggaagaaggaacagatgagatggttaaatttgtgtttcctcatttgacttccattaaacttgaatacttgaccaaat |
309 |
Q |
| |
|
| |||| | |||||||||| | |||| ||||||| |||||||| ||| ||||| ||||||||||||| || ||||||| |||||| | |||||| || |
|
|
| T |
15896029 |
gagattcaagaaattgttgccgaggaggaaggaattgatgagatagttcaatttatgtttcctcatttaacatccattacacttgattgtttgacccaac |
15895930 |
T |
|
| Q |
310 |
ttaaggcattctttgttggggttcattctcttcaatgtaaatcattgaaaa |
360 |
Q |
| |
|
| |||||||||||||| ||||| ||||| |||||||||||||||||||||| |
|
|
| T |
15895929 |
tgaaggcattctttgtcggggtccattcccttcaatgtaaatcattgaaaa |
15895879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 47 - 360
Target Start/End: Complemental strand, 19189633 - 19189320
Alignment:
| Q |
47 |
tccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgttgtggaatgcaaaagcttgttaagc |
146 |
Q |
| |
|
||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| |||| ||| | |
|
|
| T |
19189633 |
tccaaaactgaggcatgtatggaaggaggatccacataacactatgaggtttcaaaatttaagtgatgtatctgttgaggaatgtgaaaacttgataaac |
19189534 |
T |
|
| Q |
147 |
ctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaaattgttgtcaaggaagaaggaacag |
246 |
Q |
| |
|
||||||||||||||||| |||| || |||| |||||||||||||||||| ||||||| ||||| || | |||||||||| ||||||||||||| ||| |
|
|
| T |
19189533 |
ctctttccactctcagtggctaaaggtatgttgcaacttcaaagtcttcgagtaagtaaatgtggcatccaagaaattgttgccaaggaagaaggaccag |
19189434 |
T |
|
| Q |
247 |
atgagatggttaaatttgtgtttcctcatttgacttccattaaacttgaatacttgaccaaatttaaggcattctttgttggggttcattctcttcaatg |
346 |
Q |
| |
|
|||||||||||||||| ||||||| || || || ||||||| ||||||| | ||| | ||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
19189433 |
atgagatggttaaattattgtttccacagttaacatccattatacttgaacatttgccaaaacttaaggcattctttgttggggtccattctcttcaatg |
19189334 |
T |
|
| Q |
347 |
taaatcattgaaaa |
360 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
19189333 |
taaatcattgaaaa |
19189320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 17 - 360
Target Start/End: Complemental strand, 16454240 - 16453897
Alignment:
| Q |
17 |
tcaattgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgta |
116 |
Q |
| |
|
||||||||||||| || ||||||| ||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| || |
|
|
| T |
16454240 |
tcaattgaagaaactaaaactatctaatgttccaaaactgaagcatgtatggaaggaggatccacatgacactatgaggtttcaaaatttaagtgaagtg |
16454141 |
T |
|
| Q |
117 |
tctgttgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattg |
216 |
Q |
| |
|
|| |||| |||||||| ||| ||| | || ||||||| ||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
16454140 |
tcagttgaggaatgcacaagtttgattagtatctttccgctcacagtagctagagatatgatgcaacttcaaagtcttcgagtaagtaactgtgggattg |
16454041 |
T |
|
| Q |
217 |
atgaaattgttgtcaaggaagaaggaacagatgagatggttaaatttgtgtttcctcatttgacttccattaaacttgaatacttgaccaaatttaaggc |
316 |
Q |
| |
|
| |||||||||| |||||||||||||||| ||||||| || || ||||||||| ||||||| || | ||||| ||||||| || | || | ||||| |
|
|
| T |
16454040 |
aagaaattgttgccaaggaagaaggaacaaatgagatagtaaactttgtgttttctcatttaacattcattagacttgaacttttacctaagctgaaggc |
16453941 |
T |
|
| Q |
317 |
attctttgttggggttcattctcttcaatgtaaatcattgaaaa |
360 |
Q |
| |
|
|||||||||||| |||||||| |||||||||||||| ||||||| |
|
|
| T |
16453940 |
attctttgttggtgttcattcacttcaatgtaaatcgttgaaaa |
16453897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 17 - 360
Target Start/End: Complemental strand, 16463397 - 16463054
Alignment:
| Q |
17 |
tcaattgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgta |
116 |
Q |
| |
|
||||||||||||| || ||||||| ||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| || |
|
|
| T |
16463397 |
tcaattgaagaaactaaaactatctaatgttccaaaactgaagcatgtatggaaggaggatccacatgacactatgaggtttcaaaatttaagtgaagtg |
16463298 |
T |
|
| Q |
117 |
tctgttgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattg |
216 |
Q |
| |
|
|| |||| |||||||| ||| ||| | || ||||||| ||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
16463297 |
tcagttgaggaatgcacaagtttgattagtatctttccgctcacagtagctagagatatgatgcaacttcaaagtcttcgagtaagtaactgtgggattg |
16463198 |
T |
|
| Q |
217 |
atgaaattgttgtcaaggaagaaggaacagatgagatggttaaatttgtgtttcctcatttgacttccattaaacttgaatacttgaccaaatttaaggc |
316 |
Q |
| |
|
| |||||||||| |||||||||||||||| ||||||| || || ||||||||| ||||||| || | ||||| ||||||| || | || | ||||| |
|
|
| T |
16463197 |
aagaaattgttgccaaggaagaaggaacaaatgagatagtaaactttgtgttttctcatttaacattcattagacttgaacttttacctaagctgaaggc |
16463098 |
T |
|
| Q |
317 |
attctttgttggggttcattctcttcaatgtaaatcattgaaaa |
360 |
Q |
| |
|
|||||||||||| |||||||| |||||||||||||| ||||||| |
|
|
| T |
16463097 |
attctttgttggtgttcattcacttcaatgtaaatcgttgaaaa |
16463054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 17 - 360
Target Start/End: Original strand, 20486105 - 20486448
Alignment:
| Q |
17 |
tcaattgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgta |
116 |
Q |
| |
|
|||||||||||||||| ||||||| ||||||||||| ||||||||||||||||| || ||||||||||||||||| |||||| ||||||||| |||| || |
|
|
| T |
20486105 |
tcaattgaagaaattaaaactatctaatcttccaaatctgaagcatgtatggaaggatgatccacattacactattaggtttgaaaatttaattgatata |
20486204 |
T |
|
| Q |
117 |
tctgttgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattg |
216 |
Q |
| |
|
||||||| |||||| |||||||| |||||||||||| |||||||| ||||||||||||| ||||||||||||||| | ||||| | ||||| ||| |
|
|
| T |
20486205 |
tctgttgaggaatgtgaaagcttgacaagcctctttccgctctcagtggctagagatatgatgcaacttcaaagtcttaaagtaagtcagtgtggtattc |
20486304 |
T |
|
| Q |
217 |
atgaaattgttgtcaaggaagaaggaacagatgagatggttaaatttgtgtttcctcatttgacttccattaaacttgaatacttgaccaaatttaaggc |
316 |
Q |
| |
|
| |||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||| || ||||||| |||| || | ||| || || |||| |
|
|
| T |
20486305 |
aagaaattgttggcaaggaagaaggaacaaatgagatggttaaatttgtgtttcagcatttaacatccattacacttcaaaatttgcaagaacttgaggc |
20486404 |
T |
|
| Q |
317 |
attctttgttggggttcattctcttcaatgtaaatcattgaaaa |
360 |
Q |
| |
|
||||| ||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
20486405 |
attctatgttggggttcattctcttcactgtaaatcattgaaaa |
20486448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 17 - 360
Target Start/End: Complemental strand, 16492328 - 16491985
Alignment:
| Q |
17 |
tcaattgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgta |
116 |
Q |
| |
|
|||||||||||||||| ||||||| ||||||||||||||||||||||||||||| || |||||||| ||| ||||||||||||||||||| ||| ||| |
|
|
| T |
16492328 |
tcaattgaagaaattaaaactatctaatcttccaaaactgaagcatgtatggaaggaaaatccacatagcacaatgaggtttcaaaatttaaatgaagta |
16492229 |
T |
|
| Q |
117 |
tctgttgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattg |
216 |
Q |
| |
|
|| |||| ||||| || ||||||| ||||| |||||| | ||||||||| ||||||||| || ||||||| ||||| | ||||| | | ||| |||| |
|
|
| T |
16492228 |
tcggttgaggaatacagaagcttgataagcaactttccgcactcagtagcacgagatatgatactacttcaagatcttctagtaagtgattctggaattg |
16492129 |
T |
|
| Q |
217 |
atgaaattgttgtcaaggaagaaggaacagatgagatggttaaatttgtgtttcctcatttgacttccattaaacttgaatacttgaccaaatttaaggc |
316 |
Q |
| |
|
| |||||||| | ||| |||||||||||||||||||| || | ||||||||| ||||||| || ||||||| ||||||| | || ||||| ||||||| |
|
|
| T |
16492128 |
aagaaattgtcgccaatgaagaaggaacagatgagatagtacagtttgtgttttctcatttaacatccattagacttgaacatttacccaaacttaaggc |
16492029 |
T |
|
| Q |
317 |
attctttgttggggttcattctcttcaatgtaaatcattgaaaa |
360 |
Q |
| |
|
|||||||||||| || ||||||||||||||||| ||| |||||| |
|
|
| T |
16492028 |
attctttgttggtgtacattctcttcaatgtaagtcactgaaaa |
16491985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 14 - 75
Target Start/End: Original strand, 13653016 - 13653077
Alignment:
| Q |
14 |
tactcaattgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagagg |
75 |
Q |
| |
|
|||||||||||||||| || || |||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
13653016 |
tactcaattgaagaaactaaaaatatctaatcttccaaaactgaagcatgtatggaaagagg |
13653077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006 (Bit Score: 269; Significance: 1e-150; HSPs: 7)
Name: scaffold0006
Description:
Target: scaffold0006; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 14 - 382
Target Start/End: Original strand, 174875 - 175243
Alignment:
| Q |
14 |
tactcaattgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgat |
113 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
174875 |
tactcaattgaagaaattaaaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgtt |
174974 |
T |
|
| Q |
114 |
gtatctgttgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtggga |
213 |
Q |
| |
|
|||||||||| ||| |||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
174975 |
gtatctgttgcggattgcaaaagcttgataagcctctttccactctcagtggctagagatatgatgcaacttcaaagtcttcttgtaagtaactgtggga |
175074 |
T |
|
| Q |
214 |
ttgatgaaattgttgtcaaggaagaaggaacagatgagatggttaaatttgtgtttcctcatttgacttccattaaacttgaatacttgaccaaatttaa |
313 |
Q |
| |
|
|||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| |||| |
|
|
| T |
175075 |
ttgaagaaattgttgtcaaggaagaaggaccagatgagatggttaaatttgtgtttcctcatttgacttccattgaacttgataatttgaccaaacttaa |
175174 |
T |
|
| Q |
314 |
ggcattctttgttggggttcattctcttcaatgtaaatcattgaaaaagataaagttgtatgaatgtcc |
382 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||| || ||||||| | ||||||| |
|
|
| T |
175175 |
agcattctttgttggggtccattctcttcaatgtaaatcattgaaaaccatcaagttgtttaaatgtcc |
175243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #2
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 14 - 382
Target Start/End: Original strand, 190283 - 190651
Alignment:
| Q |
14 |
tactcaattgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgat |
113 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
190283 |
tactcaattgaagaaattaaaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgtt |
190382 |
T |
|
| Q |
114 |
gtatctgttgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtggga |
213 |
Q |
| |
|
|||||||||| ||| |||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
190383 |
gtatctgttgcggattgcaaaagcttgataagcctctttccactctcagtggctagagatatgatgcaacttcaaagtcttcttgtaagtaactgtggga |
190482 |
T |
|
| Q |
214 |
ttgatgaaattgttgtcaaggaagaaggaacagatgagatggttaaatttgtgtttcctcatttgacttccattaaacttgaatacttgaccaaatttaa |
313 |
Q |
| |
|
|||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| |||| |
|
|
| T |
190483 |
ttgaagaaattgttgtcaaggaagaaggaccagatgagatggttaaatttgtgtttcctcatttgacttccattgaacttgataatttgaccaaacttaa |
190582 |
T |
|
| Q |
314 |
ggcattctttgttggggttcattctcttcaatgtaaatcattgaaaaagataaagttgtatgaatgtcc |
382 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||| || ||||||| | ||||||| |
|
|
| T |
190583 |
agcattctttgttggggtccattctcttcaatgtaaatcattgaaaaccatcaagttgtttaaatgtcc |
190651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #3
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 24 - 360
Target Start/End: Original strand, 113712 - 114048
Alignment:
| Q |
24 |
aagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgtatctgttg |
123 |
Q |
| |
|
||||||||| ||||||| |||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
113712 |
aagaaattaaaactatctaatcttccaaaactgaggcatgtatggaaggaggatccacataacactatgaggtttcaaaatttaagtgatgtatccgttg |
113811 |
T |
|
| Q |
124 |
tggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaaat |
223 |
Q |
| |
|
||| |||||| |||||| |||||||||||||||| ||||||||||||||| ||| |||||||||||||||| | ||| ||| ||||||||| | ||||| |
|
|
| T |
113812 |
tgggatgcaatagcttgataagcctctttccactttcagtagctagagatttgatgcaacttcaaagtcttcaagtaattaaatgtgggattcaagaaat |
113911 |
T |
|
| Q |
224 |
tgttgtcaaggaagaaggaacagatgagatggttaaatttgtgtttcctcatttgacttccattaaacttgaatacttgaccaaatttaaggcattcttt |
323 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| | | ||||||||| |||||||||||||| |
|
|
| T |
113912 |
tgttgccaaggaagaaggaacagatgagatggttaaatttgtgtttcctcatttgacattcattaaacttaataatttgaccaaacttaaggcattcttt |
114011 |
T |
|
| Q |
324 |
gttggggttcattctcttcaatgtaaatcattgaaaa |
360 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
114012 |
gttggggtccattctcttcaatgcaaatcattgaaaa |
114048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #4
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 14 - 238
Target Start/End: Original strand, 210607 - 210831
Alignment:
| Q |
14 |
tactcaattgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgat |
113 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
210607 |
tactcaattgaagaaattagaactattcaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgat |
210706 |
T |
|
| Q |
114 |
gtatctgttgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtggga |
213 |
Q |
| |
|
||||||||||||| |||||| |||||| |||||||||||||| ||||||| ||||||||||||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
210707 |
gtatctgttgtgggatgcaatagcttgataagcctctttccattctcagtggctagagatatgatgcaacttcaaagtcttcatgtaagtaactgtggga |
210806 |
T |
|
| Q |
214 |
ttgatgaaattgttgtcaaggaaga |
238 |
Q |
| |
|
|||| |||||||||| |||||||| |
|
|
| T |
210807 |
ttgaagaaattgttgcaaaggaaga |
210831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 247 - 372
Target Start/End: Original strand, 3650 - 3775
Alignment:
| Q |
247 |
atgagatggttaaatttgtgtttcctcatttgacttccattaaacttgaatacttgaccaaatttaaggcattctttgttggggttcattctcttcaatg |
346 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3650 |
atgagatggttaaatttgtgtttcctcatttgacttccattaaccttaagtacttgaccaaacttaaggcattctttgttggggttcattctcttcaatg |
3749 |
T |
|
| Q |
347 |
taaatcattgaaaaagataaagttgt |
372 |
Q |
| |
|
|||||||||||||| ||| ||||||| |
|
|
| T |
3750 |
taaatcattgaaaacgatcaagttgt |
3775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #6
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 14 - 127
Target Start/End: Original strand, 118477 - 118590
Alignment:
| Q |
14 |
tactcaattgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgat |
113 |
Q |
| |
|
|||||||||||| |||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
118477 |
tactcaattgaaaaaattaaaactattcaatcttccaaaactgaaacatgtatggaaagaggatccacattacactatgaggtttgaaaatttaagtgat |
118576 |
T |
|
| Q |
114 |
gtatctgttgtgga |
127 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
118577 |
gtatctgttgtgga |
118590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 14 - 75
Target Start/End: Original strand, 142777 - 142838
Alignment:
| Q |
14 |
tactcaattgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagagg |
75 |
Q |
| |
|
|||||||||||||||| || || |||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
142777 |
tactcaattgaagaaactaaaaatatctaatcttccaaaactgaagcatgtatggaaagagg |
142838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 251; Significance: 1e-139; HSPs: 8)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 14 - 360
Target Start/End: Complemental strand, 20806260 - 20805914
Alignment:
| Q |
14 |
tactcaattgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgat |
113 |
Q |
| |
|
||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
20806260 |
tactcaattgaagaaattaaaactatctaatcttccaaaactgaagcatgtatggaaaaaggatccacattacactatgaagtttgaaaatttaagtgat |
20806161 |
T |
|
| Q |
114 |
gtatctgttgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtggga |
213 |
Q |
| |
|
||||||||||||| |||||| |||||| ||||||||||||| |||||||| ||||||||||||| |||||||||||||||| | ||||||| ||||||| |
|
|
| T |
20806160 |
gtatctgttgtgggatgcaatagcttgataagcctctttccgctctcagtggctagagatatgatgcaacttcaaagtcttcaagtaagtaagtgtggga |
20806061 |
T |
|
| Q |
214 |
ttgatgaaattgttgtcaaggaagaaggaacagatgagatggttaaatttgtgtttcctcatttgacttccattaaacttgaatacttgaccaaatttaa |
313 |
Q |
| |
|
|| | ||||| || | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||| |
|
|
| T |
20806060 |
ttcaagaaatcgtggccaaggaagaaggaacatatgagatggttaaatttgtgtttcctcatttgacttccattaaccttgagtacttgaccaaacttaa |
20805961 |
T |
|
| Q |
314 |
ggcattctttgttggggttcattctcttcaatgtaaatcattgaaaa |
360 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20805960 |
ggcattctttgttggggttcattctcttcaatgtaaatcattgaaaa |
20805914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 14 - 360
Target Start/End: Complemental strand, 20769383 - 20769037
Alignment:
| Q |
14 |
tactcaattgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgat |
113 |
Q |
| |
|
||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20769383 |
tactcaattgaagaaattaaaactatctaatcttccaaaactgaagcatgtatggaaggtggatccacattacactatgaggtttcaaaatttaagtgat |
20769284 |
T |
|
| Q |
114 |
gtatctgttgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtggga |
213 |
Q |
| |
|
|| ||||||| ||| ||| |||||||| ||||||||||||||||||| || |||||||||||||| || ||||||||||||||| | ||||| ||||||| |
|
|
| T |
20769283 |
gtgtctgttggggattgcgaaagcttgataagcctctttccactctctgtggctagagatatgaagcagcttcaaagtcttcgagttagtaaatgtggga |
20769184 |
T |
|
| Q |
214 |
ttgatgaaattgttgtcaaggaagaaggaacagatgagatggttaaatttgtgtttcctcatttgacttccattaaacttgaatacttgaccaaatttaa |
313 |
Q |
| |
|
|| | |||||||||| |||||||||||||||| ||||||| ||||||||||||||||| || || || ||||||| |||| | | |||||||||| |||| |
|
|
| T |
20769183 |
ttcaagaaattgttggcaaggaagaaggaacaaatgagatagttaaatttgtgtttccgcagttaacatccattacacttcattgcttgaccaaacttaa |
20769084 |
T |
|
| Q |
314 |
ggcattctttgttggggttcattctcttcaatgtaaatcattgaaaa |
360 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
20769083 |
ggcattctttgatgggggtcattctcttcaatgtaaatcattgaaaa |
20769037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 14 - 360
Target Start/End: Complemental strand, 20779177 - 20778831
Alignment:
| Q |
14 |
tactcaattgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgat |
113 |
Q |
| |
|
||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20779177 |
tactcaattgaagaaattaaaactatctaatcttccaaaactgaagcatgtatggaaggtggatccacattacactatgaggtttcaaaatttaagtgat |
20779078 |
T |
|
| Q |
114 |
gtatctgttgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtggga |
213 |
Q |
| |
|
|| ||||||| ||| ||| |||||||| ||||||||||||||||||| || |||||||||||||| || ||||||||||||||| | ||||| ||||||| |
|
|
| T |
20779077 |
gtgtctgttggggattgcgaaagcttgataagcctctttccactctctgtggctagagatatgaagcagcttcaaagtcttcgagttagtaaatgtggga |
20778978 |
T |
|
| Q |
214 |
ttgatgaaattgttgtcaaggaagaaggaacagatgagatggttaaatttgtgtttcctcatttgacttccattaaacttgaatacttgaccaaatttaa |
313 |
Q |
| |
|
|| | |||||||||| |||||||||||||||| ||||||| ||||||||||||||||| || || || ||||||| |||| | | |||||||||| |||| |
|
|
| T |
20778977 |
ttcaagaaattgttggcaaggaagaaggaacaaatgagatagttaaatttgtgtttccgcagttaacatccattacacttcattgcttgaccaaacttaa |
20778878 |
T |
|
| Q |
314 |
ggcattctttgttggggttcattctcttcaatgtaaatcattgaaaa |
360 |
Q |
| |
|
||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
20778877 |
ggcattctttgatgggggtcattctcttcaatgtaaatcattgaaaa |
20778831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 14 - 360
Target Start/End: Complemental strand, 20850034 - 20849687
Alignment:
| Q |
14 |
tactcaattgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgat |
113 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
20850034 |
tactcaattgaagaaattaaaactatccaatcttccaaaactgaagcatgtatggaaagaggatccatattacactatgaggtttgaaaatttaagtgat |
20849935 |
T |
|
| Q |
114 |
gtatctgttgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtggga |
213 |
Q |
| |
|
|||||||||||||| |||||||||||| |||||||||||||| ||||||| ||||||||||||| |||||||||||||||| | || ||| |||||||| |
|
|
| T |
20849934 |
gtatctgttgtggattgcaaaagcttgataagcctctttccattctcagtggctagagatatgatgcaacttcaaagtcttccagtacgtagctgtggga |
20849835 |
T |
|
| Q |
214 |
ttgatgaaattgttgtcaaggaagaaggaacagatgagatggttaaatttgtgtttcct-catttgacttccattaaacttgaatacttgaccaaattta |
312 |
Q |
| |
|
|| | ||||||||| |||| |||| |||| | ||||| |||||||||||||||||| || || || ||||||| |||| |||| ||| ||||| ||| |
|
|
| T |
20849834 |
ttcaagaaattgttaaagaggaggaagcaacaaaggagatagttaaatttgtgtttcctgcagttaacatccattatacttcaatatttgcccaaactta |
20849735 |
T |
|
| Q |
313 |
aggcattctttgttggggttcattctcttcaatgtaaatcattgaaaa |
360 |
Q |
| |
|
||||||||||||||| || |||||||||||||||||||||||||||| |
|
|
| T |
20849734 |
aggcattctttgttgtggcccattctcttcaatgtaaatcattgaaaa |
20849687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 17 - 360
Target Start/End: Complemental strand, 20835169 - 20834826
Alignment:
| Q |
17 |
tcaattgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgta |
116 |
Q |
| |
|
|||| ||||||||||| ||||||| |||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
20835169 |
tcaactgaagaaattaaaactatctaatcttccaaaactgaggcatgtatggaaggaggatccacataacactatgaggtttcaaaatttaagtgatgta |
20835070 |
T |
|
| Q |
117 |
tctgttgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattg |
216 |
Q |
| |
|
|| ||||||| |||||| |||||| ||||| |||||||||| ||||||||||||||||||| |||||||||||||||| | ||| ||| ||||||||| |
|
|
| T |
20835069 |
tccgttgtgggatgcaatagcttgataagcttctttccactttcagtagctagagatatgatgcaacttcaaagtcttctagtaattaaatgtgggattc |
20834970 |
T |
|
| Q |
217 |
atgaaattgttgtcaaggaagaaggaacagatgagatggttaaatttgtgtttcctcatttgacttccattaaacttgaatac-ttgaccaaatttaagg |
315 |
Q |
| |
|
| |||||||||| || |||| | ||| | ||||||||||||||||||||||||||||||||||| | |||||||||| |||| ||||||||| |||||| |
|
|
| T |
20834969 |
aagaaattgttgccagggaatatggaccggatgagatggttaaatttgtgtttcctcatttgacattcattaaactt-catactttgaccaaacttaagg |
20834871 |
T |
|
| Q |
316 |
cattctttgttggggttcattctcttcaatgtaaatcattgaaaa |
360 |
Q |
| |
|
|||||||||||||||| |||||||||| ||| ||||||||||||| |
|
|
| T |
20834870 |
cattctttgttggggtccattctcttcgatgcaaatcattgaaaa |
20834826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 14 - 360
Target Start/End: Complemental strand, 20841940 - 20841593
Alignment:
| Q |
14 |
tactcaattgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgat |
113 |
Q |
| |
|
|||||||||||| |||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
20841940 |
tactcaattgaaaaaattaaaactattcaatcttccaaaactgaaacatgtatggaaagaggatccacattacactatgaggtttgaaaatttaagtgat |
20841841 |
T |
|
| Q |
114 |
gtatctgttgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtggga |
213 |
Q |
| |
|
|||||||||||||| |||||||||||| |||||||||||||| ||||||| ||||||||||||| |||||||||||||||| | || ||| |||||||| |
|
|
| T |
20841840 |
gtatctgttgtggattgcaaaagcttgataagcctctttccattctcagtggctagagatatgatgcaacttcaaagtcttccagtacgtagctgtggga |
20841741 |
T |
|
| Q |
214 |
ttgatgaaattgttgtcaaggaagaaggaacagatgagatggttaaatttgtgtttcct-catttgacttccattaaacttgaatacttgaccaaattta |
312 |
Q |
| |
|
|| | ||||||||| |||| |||| |||| | ||||| |||||||||||||||||| || || || ||||||| |||| |||| ||| ||||| ||| |
|
|
| T |
20841740 |
ttcaagaaattgttaaagaggaggaagcaacaaaggagatagttaaatttgtgtttcctgcagttaacatccattatacttcaatatttgcccaaactta |
20841641 |
T |
|
| Q |
313 |
aggcattctttgttggggttcattctcttcaatgtaaatcattgaaaa |
360 |
Q |
| |
|
||||||||||||||| || |||||||||||||||||||||||||||| |
|
|
| T |
20841640 |
aggcattctttgttgtggcccattctcttcaatgtaaatcattgaaaa |
20841593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 16 - 360
Target Start/End: Complemental strand, 20772330 - 20771986
Alignment:
| Q |
16 |
ctcaattgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgt |
115 |
Q |
| |
|
||||| ||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
20772330 |
ctcaactgaagaaattaaaattatctaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgcggtttcaaaatttaagtgatgt |
20772231 |
T |
|
| Q |
116 |
atctgttgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggatt |
215 |
Q |
| |
|
|||||| |||| |||||||| |||| ||| | |||||||||||||||| |||| || |||| |||||||||||||||||| ||||||| |||| || |
|
|
| T |
20772230 |
atctgtggtgggatgcaaaaacttgataaacatctttccactctcagtggctaaaggtatgttgcaacttcaaagtcttcgagtaagtaaaagtggcatc |
20772131 |
T |
|
| Q |
216 |
gatgaaattgttgtcaaggaagaaggaacagatgagatggttaaatttgtgtttcctcatttgacttccattaaacttgaatacttgaccaaatttaagg |
315 |
Q |
| |
|
| |||||||||| ||||||||| |||||||| ||||| ||||||||||||||||| || || || ||||||| |||| || | ||| | ||| |||||| |
|
|
| T |
20772130 |
caagaaattgttgccaaggaagatggaacagaagagatagttaaatttgtgtttccacagttaacatccattatacttaaacatttgccaaaacttaagg |
20772031 |
T |
|
| Q |
316 |
cattctttgttggggttcattctcttcaatgtaaatcattgaaaa |
360 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
20772030 |
cattctttgttggggtccattctcttcaatgtaaatcattgaaaa |
20771986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 16 - 360
Target Start/End: Complemental strand, 20782124 - 20781780
Alignment:
| Q |
16 |
ctcaattgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgt |
115 |
Q |
| |
|
||||| ||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
20782124 |
ctcaactgaagaaattaaaattatctaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgcggtttcaaaatttaagtgatgt |
20782025 |
T |
|
| Q |
116 |
atctgttgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggatt |
215 |
Q |
| |
|
|||||| |||| |||||||| |||| ||| | |||||||||||||||| |||| || |||| |||||||||||||||||| ||||||| |||| || |
|
|
| T |
20782024 |
atctgtggtgggatgcaaaaacttgataaacatctttccactctcagtggctaaaggtatgttgcaacttcaaagtcttcgagtaagtaaaagtggcatc |
20781925 |
T |
|
| Q |
216 |
gatgaaattgttgtcaaggaagaaggaacagatgagatggttaaatttgtgtttcctcatttgacttccattaaacttgaatacttgaccaaatttaagg |
315 |
Q |
| |
|
| |||||||||| ||||||||| |||||||| ||||| ||||||||||||||||| || || || ||||||| |||| || | ||| | ||| |||||| |
|
|
| T |
20781924 |
caagaaattgttgccaaggaagatggaacagaagagatagttaaatttgtgtttccacagttaacatccattatacttaaacatttgccaaaacttaagg |
20781825 |
T |
|
| Q |
316 |
cattctttgttggggttcattctcttcaatgtaaatcattgaaaa |
360 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
20781824 |
cattctttgttggggtccattctcttcaatgtaaatcattgaaaa |
20781780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 240; Significance: 1e-133; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 17 - 372
Target Start/End: Complemental strand, 38052986 - 38052631
Alignment:
| Q |
17 |
tcaattgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgta |
116 |
Q |
| |
|
|||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38052986 |
tcaattgaagaaattaaaactatctaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgta |
38052887 |
T |
|
| Q |
117 |
tctgttgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattg |
216 |
Q |
| |
|
|||||||||| ||| | | |||| |||||||||||||||||||| | |||| |||||||| ||||||||| |||||| | | |||||||||||||||| |
|
|
| T |
38052886 |
tctgttgtgggatgtgagaacttgataagcctctttccactctcactggctaaagatatgatgcaacttcaatgtcttctagtcagtaactgtgggattg |
38052787 |
T |
|
| Q |
217 |
atgaaattgttgtcaaggaagaaggaacagatgagatggttaaatttgtgtttcctcatttgacttccattaaacttgaatacttgaccaaatttaaggc |
316 |
Q |
| |
|
| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||| | | |||||||||| ||||||| |
|
|
| T |
38052786 |
aagaaattgttgccaaggaagaaggaacagatgaaatggttaaatttgtgtttcctcatttgacatccattgaacttaatttcttgaccaaacttaaggc |
38052687 |
T |
|
| Q |
317 |
attctttgttggggttcattctcttcaatgtaaatcattgaaaaagataaagttgt |
372 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||| |
|
|
| T |
38052686 |
attctttgttggagttcattctcttcaatgtaaatcattgaaaatgatcaagttgt |
38052631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 14 - 372
Target Start/End: Complemental strand, 30703038 - 30702683
Alignment:
| Q |
14 |
tactcaattgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgat |
113 |
Q |
| |
|
||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
30703038 |
tactcaattgaagaaattaaaactatctaatcttccaaaactgaagcatgtatcgaaagaggatccacattaccctatgaggtttcaaaatttaagtgat |
30702939 |
T |
|
| Q |
114 |
gtatctgttgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtggga |
213 |
Q |
| |
|
|||||||||| |||||||||||||||| ||||| ||||||||||||| || |||||||||||| |||||||||||||||| | |||||| ||||||| |
|
|
| T |
30702938 |
gtatctgttgcggaatgcaaaagcttgataagcttctttccactctcggtttctagagatatgatgcaacttcaaagtcttcaagcaagtaattgtggga |
30702839 |
T |
|
| Q |
214 |
ttgatgaaattgttgtcaaggaagaaggaacagatgagatggttaaatttgtgtttcctcatttgacttccattaaacttgaatacttgaccaaatttaa |
313 |
Q |
| |
|
|| | |||||||||| |||| |||||||| | ||||| ||||||||||||||||||| ||| || ||| | | |||||||| ||| ||||| |||| |
|
|
| T |
30702838 |
ttcaagaaattgttgccaag---gaaggaacgaaagagatagttaaatttgtgtttcctcgtttaacatccctcacgcttgaatatttgcccaaacttaa |
30702742 |
T |
|
| Q |
314 |
ggcattctttgttggggttcattctcttcaatgtaaatcattgaaaaagataaagttgt |
372 |
Q |
| |
|
|||||| ||| ||||||| |||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
30702741 |
ggcattttttcttggggtccattctcttcaatgtaaatcattgaaaacgataaagttgt |
30702683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 14 - 360
Target Start/End: Complemental strand, 38055187 - 38054841
Alignment:
| Q |
14 |
tactcaattgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgat |
113 |
Q |
| |
|
||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
38055187 |
tactcaattgaagaaattaaaactatctaatcttccaaaattgaagcatgtatggaaggaggatccacattacactatgaggtttcaaaatataaatgat |
38055088 |
T |
|
| Q |
114 |
gtatctgttgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtggga |
213 |
Q |
| |
|
|||| |||| |||||| |||| ||| |||||||||||||||||||||| ||||||||||| | |||||||||||||| | ||||||||||||||| |
|
|
| T |
38055087 |
gtatatgttaaggaatgtgaaagtttgataagcctctttccactctcagtggctagagatataatgcaacttcaaagtctgaaagtaagtaactgtggga |
38054988 |
T |
|
| Q |
214 |
ttgatgaaattgttgtcaaggaagaaggaacagatgagatggttaaatttgtgtttcctcatttgacttccattaaacttgaatacttgaccaaatttaa |
313 |
Q |
| |
|
|| | ||||| |||| |||||| ||||||||| |||||| ||||| ||||||||||||||||| || ||||| | ||||||| | ||| ||||| |||| |
|
|
| T |
38054987 |
ttcaagaaatcgttgccaaggacgaaggaacatgtgagatagttaagtttgtgtttcctcatttaacatccatcacacttgaagatttgcccaaacttaa |
38054888 |
T |
|
| Q |
314 |
ggcattctttgttggggttcattctcttcaatgtaaatcattgaaaa |
360 |
Q |
| |
|
| ||||||||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
38054887 |
gacattctttgttggggctcattctcttcaatgtaaatctttgaaaa |
38054841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 239; Significance: 1e-132; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 14 - 360
Target Start/End: Original strand, 21816787 - 21817133
Alignment:
| Q |
14 |
tactcaattgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgat |
113 |
Q |
| |
|
||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
21816787 |
tactcaattaaagaaattaaaactatctaatcttccaaaactgaagcatgtatggaaagaggatccacattacacactgaggtttgaaaatttaagtgat |
21816886 |
T |
|
| Q |
114 |
gtatctgttgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtggga |
213 |
Q |
| |
|
|| |||||||||| ||||||||||||| | |||||||||||||||||||| |||||||||||||| |||||||||||||||| | ||||||| ||||||| |
|
|
| T |
21816887 |
gtttctgttgtgggatgcaaaagcttgatgagcctctttccactctcagttgctagagatatgaagcaacttcaaagtcttcaagtaagtaaatgtggga |
21816986 |
T |
|
| Q |
214 |
ttgatgaaattgttgtcaaggaagaaggaacagatgagatggttaaatttgtgtttcctcatttgacttccattaaacttgaatacttgaccaaatttaa |
313 |
Q |
| |
|
|||| |||||||| | ||||||||||||| ||||||||||||||||||||||||||| |||||| || |||||||||||| | | ||||||||| |||| |
|
|
| T |
21816987 |
ttgaagaaattgtggccaaggaagaaggaccagatgagatggttaaatttgtgtttcttcatttaacatccattaaactttatgatttgaccaaacttaa |
21817086 |
T |
|
| Q |
314 |
ggcattctttgttggggttcattctcttcaatgtaaatcattgaaaa |
360 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21817087 |
ggcattctttgttggggttcattctcttcaatgtaaatcattgaaaa |
21817133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 14 - 360
Target Start/End: Complemental strand, 22273883 - 22273537
Alignment:
| Q |
14 |
tactcaattgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgat |
113 |
Q |
| |
|
|||||||||| | |||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||| |||| |
|
|
| T |
22273883 |
tactcaattgcaaaaattaaaactatctaatcttccaaaactgaagcatgtatggaaggaggatccacataacactgtgaggtttcaaaatttaaatgat |
22273784 |
T |
|
| Q |
114 |
gtatctgttgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtggga |
213 |
Q |
| |
|
||||||||||||| ||||| ||||||| |||||||||||||||||||||| ||||| ||||||| || |||||||||||||| ||||||| || || | |
|
|
| T |
22273783 |
gtatctgttgtgggatgcagaagcttgataagcctctttccactctcagtggctagtgatatgatgaaaattcaaagtcttcgagtaagtaaatgcggca |
22273684 |
T |
|
| Q |
214 |
ttgatgaaattgttgtcaaggaagaaggaacagatgagatggttaaatttgtgtttcctcatttgacttccattaaacttgaatacttgaccaaatttaa |
313 |
Q |
| |
|
| | |||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||| || ||||| | |||| | || ||||||||| |||| |
|
|
| T |
22273683 |
tccaagaaattgttgccaaggaagatggaacagatgagatagttaaatttgtgtttcctcatttaacatccatcacacttaattatttgaccaaacttaa |
22273584 |
T |
|
| Q |
314 |
ggcattctttgttggggttcattctcttcaatgtaaatcattgaaaa |
360 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
22273583 |
ggcattctttgttggggtccattctcttcaatgtaaatcattgaaaa |
22273537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012 (Bit Score: 238; Significance: 1e-131; HSPs: 1)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 14 - 359
Target Start/End: Original strand, 120473 - 120818
Alignment:
| Q |
14 |
tactcaattgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgat |
113 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
120473 |
tactcaattgaagaaattagaactattcaatctaccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgat |
120572 |
T |
|
| Q |
114 |
gtatctgttgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtggga |
213 |
Q |
| |
|
||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||| |||| ||||||||||||||| |
|
|
| T |
120573 |
gtatctgttgtggaatgtgaaagcttgataagcctctttccactctcagttgctagagatatgatgcaacttcaaagacttcatgtaagtaactgtggga |
120672 |
T |
|
| Q |
214 |
ttgatgaaattgttgtcaaggaagaaggaacagatgagatggttaaatttgtgtttcctcatttgacttccattaaacttgaatacttgaccaaatttaa |
313 |
Q |
| |
|
|||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||| | | ||||||| | |||| |
|
|
| T |
120673 |
ttgaagaaattgttgcaaaggaagaaggaacagatgagatagttaaatttgtgtttcctcattgaacttccattgaactttataatttgaccagacttaa |
120772 |
T |
|
| Q |
314 |
ggcattctttgttggggttcattctcttcaatgtaaatcattgaaa |
359 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |||||||||||| |
|
|
| T |
120773 |
ggcattctttgttggggtccattctcttcaatgcaaatcattgaaa |
120818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0069 (Bit Score: 236; Significance: 1e-130; HSPs: 2)
Name: scaffold0069
Description:
Target: scaffold0069; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 17 - 372
Target Start/End: Original strand, 42214 - 42569
Alignment:
| Q |
17 |
tcaattgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgta |
116 |
Q |
| |
|
|||| ||||||||||| ||||||| |||||| ||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
42214 |
tcaactgaagaaattaaaactatctaatctttcaaaactgaggcatgtatggaaggaggatccacataacactatgaggtttcaaaatttaagtgatgta |
42313 |
T |
|
| Q |
117 |
tctgttgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattg |
216 |
Q |
| |
|
|||||||||| |||||| |||||| ||||||||||||| ||||||| ||||| ||||||| |||||||||||||||| | ||||| | ||||||||| |
|
|
| T |
42314 |
tctgttgtgggatgcaatagcttgataagcctctttccgttctcagtggctagcgatatgatgcaacttcaaagtcttcaagtaagtcagtgtgggattc |
42413 |
T |
|
| Q |
217 |
atgaaattgttgtcaaggaagaaggaacagatgagatggttaaatttgtgtttcctcatttgacttccattaaacttgaatacttgaccaaatttaaggc |
316 |
Q |
| |
|
| |||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||| |
|
|
| T |
42414 |
aagaaattgtggccaaggaagaaggaacatatgagatggttaaatttgtgtttcctcatttgacttccattaaccttgagtacttgaccaaacttaaggc |
42513 |
T |
|
| Q |
317 |
attctttgttggggttcattctcttcaatgtaaatcattgaaaaagataaagttgt |
372 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |
|
|
| T |
42514 |
attctttgttggggttcattctcttcaatgtaaatcattgaaaacgatcaagttgt |
42569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0069; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 17 - 360
Target Start/End: Original strand, 47890 - 48233
Alignment:
| Q |
17 |
tcaattgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgta |
116 |
Q |
| |
|
|||| ||||||||||| ||||||| |||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
47890 |
tcaactgaagaaattaaaactatctaatcttccaaaactgaggcatgtatggaaggaggatccacataacactatgaggtttcaaaatttaagtgatgta |
47989 |
T |
|
| Q |
117 |
tctgttgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattg |
216 |
Q |
| |
|
|| ||||||| |||||| |||||| |||||||||||||||| ||||||||||||||| ||| |||||||||| ||||| | ||| ||| ||||||||| |
|
|
| T |
47990 |
tccgttgtgggatgcaatagcttgataagcctctttccactttcagtagctagagatgtgatgcaacttcaaaatcttcaagtaattaaatgtgggattc |
48089 |
T |
|
| Q |
217 |
atgaaattgttgtcaaggaagaaggaacagatgagatggttaaatttgtgtttcctcatttgacttccattaaacttgaatacttgaccaaatttaaggc |
316 |
Q |
| |
|
| ||||| |||| || |||||| ||| ||||||||||||||||||||||||||||||||||||| | |||||||||| | | ||||||||| | ||||| |
|
|
| T |
48090 |
aagaaatcgttgccagggaagatggaccagatgagatggttaaatttgtgtttcctcatttgacattcattaaacttaataatttgaccaaactaaaggc |
48189 |
T |
|
| Q |
317 |
attctttgttggggttcattctcttcaatgtaaatcattgaaaa |
360 |
Q |
| |
|
||||||||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
48190 |
attctttgttggggtccattctcttcaatgcaaatcattgaaaa |
48233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0460 (Bit Score: 186; Significance: 1e-100; HSPs: 2)
Name: scaffold0460
Description:
Target: scaffold0460; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 17 - 382
Target Start/End: Original strand, 11659 - 12024
Alignment:
| Q |
17 |
tcaattgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgta |
116 |
Q |
| |
|
|||||||||||||||| ||||||| ||||||||||| ||||||||||||||||| || ||||||||||||||||| |||||| ||||||||| |||| || |
|
|
| T |
11659 |
tcaattgaagaaattaaaactatctaatcttccaaatctgaagcatgtatggaaggatgatccacattacactattaggtttgaaaatttaattgatata |
11758 |
T |
|
| Q |
117 |
tctgttgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattg |
216 |
Q |
| |
|
||||||| |||||| |||||||| |||||||||||| |||||||| ||||||||||||| |||||||||||||||| | ||||| | ||||||||| |
|
|
| T |
11759 |
tctgttgaggaatgtgaaagcttgacaagcctctttccgctctcagtggctagagatatgatgcaacttcaaagtcttcaagtaagtcagtgtgggattc |
11858 |
T |
|
| Q |
217 |
atgaaattgttgtcaaggaagaaggaacagatgagatggttaaatttgtgtttcctcatttgacttccattaaacttgaatacttgaccaaatttaaggc |
316 |
Q |
| |
|
| |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||| | | ||| || || |||| |
|
|
| T |
11859 |
aagaaattgttggcaaggaagaaggaacaaatgagatggttaaatttgtgtttcctcatttgacattcattaaacttctaaatttgcaagaacttgaggc |
11958 |
T |
|
| Q |
317 |
attctttgttggggttcattctcttcaatgtaaatcattgaaaaagataaagttgtatgaatgtcc |
382 |
Q |
| |
|
||||| ||||||||||||||||||||| |||||||||||||||| ||| || || |||| |||||| |
|
|
| T |
11959 |
attctatgttggggttcattctcttcactgtaaatcattgaaaacgatcaacttctatggatgtcc |
12024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0460; HSP #2
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 17 - 360
Target Start/End: Original strand, 7094 - 7437
Alignment:
| Q |
17 |
tcaattgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgatgta |
116 |
Q |
| |
|
|||||||||||||||| ||||||| ||||||||||| ||||||||||||||||| || ||||||||||||||||| |||||| ||||||||| |||| || |
|
|
| T |
7094 |
tcaattgaagaaattaaaactatctaatcttccaaatctgaagcatgtatggaaggatgatccacattacactattaggtttgaaaatttaattgatata |
7193 |
T |
|
| Q |
117 |
tctgttgtggaatgcaaaagcttgttaagcctctttccactctcagtagctagagatatgaaacaacttcaaagtcttcgaataagtaactgtgggattg |
216 |
Q |
| |
|
||||||| |||||| |||||||| |||||||||||| |||||||| ||||||||||||| ||||||||||||||| | ||||| | ||||| ||| |
|
|
| T |
7194 |
tctgttgaggaatgtgaaagcttgacaagcctctttccgctctcagtggctagagatatgatgcaacttcaaagtcttaaagtaagtcagtgtggtattc |
7293 |
T |
|
| Q |
217 |
atgaaattgttgtcaaggaagaaggaacagatgagatggttaaatttgtgtttcctcatttgacttccattaaacttgaatacttgaccaaatttaaggc |
316 |
Q |
| |
|
| |||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||| || ||||||| |||| || | ||| || || |||| |
|
|
| T |
7294 |
aagaaattgttggcaaggaagaaggaacaaatgagatggttaaatttgtgtttcagcatttaacatccattacacttcaaaatttgcaagaacttgaggc |
7393 |
T |
|
| Q |
317 |
attctttgttggggttcattctcttcaatgtaaatcattgaaaa |
360 |
Q |
| |
|
||||| ||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
7394 |
attctatgttggggttcattctcttcactgtaaatcattgaaaa |
7437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0068 (Bit Score: 130; Significance: 3e-67; HSPs: 2)
Name: scaffold0068
Description:
Target: scaffold0068; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 171 - 360
Target Start/End: Complemental strand, 32692 - 32503
Alignment:
| Q |
171 |
gatatgaaacaacttcaaagtcttcgaataagtaactgtgggattgatgaaattgttgtcaaggaagaaggaacagatgagatggttaaatttgtgtttc |
270 |
Q |
| |
|
||||||| |||||||||||||||| | ||||| | ||||||||| |||||||| | |||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
32692 |
gatatgatgcaacttcaaagtcttcaagtaagtcagtgtgggattctagaaattgtggccaaggaagaaggaacatatgagatggttaaatttgtgtttc |
32593 |
T |
|
| Q |
271 |
ctcatttgacttccattaaacttgaatacttgaccaaatttaaggcattctttgttggggttcattctcttcaatgtaaatcattgaaaa |
360 |
Q |
| |
|
||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32592 |
ctcatttgacttccattaaccttgagtacttgaccaaacttaaggcattctttgttggggttcattctcttcaatgtaaatcattgaaaa |
32503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0068; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 34398 - 34281
Alignment:
| Q |
14 |
tactcaattgaagaaattagaactatccaatcttccaaaactgaagcatgtatggaaagaggatccacattacactatgaggtttcaaaatttaagtgat |
113 |
Q |
| |
|
||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
34398 |
tactcaattgaagaaattaaaactatctaatcttccaaaactgaagcatgtatggaaaaaggatccacattacactatgaagtttgaaaatttaagtgat |
34299 |
T |
|
| Q |
114 |
gtatctgttgtggaatgc |
131 |
Q |
| |
|
||||||||||||| |||| |
|
|
| T |
34298 |
gtatctgttgtgggatgc |
34281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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