View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4755-Insertion-2 (Length: 783)

Name: NF4755-Insertion-2
Description: NF4755
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4755-Insertion-2
NF4755-Insertion-2
[»] chr1 (37 HSPs)
chr1 (439-783)||(18043384-18043728)
chr1 (8-239)||(18042767-18042998)
chr1 (277-396)||(18043034-18043153)
chr1 (277-336)||(18037872-18037931)
chr1 (8-73)||(18037751-18037816)
chr1 (517-559)||(41950072-41950114)
chr1 (516-557)||(28832161-28832202)
chr1 (516-556)||(12522110-12522150)
chr1 (516-556)||(22335388-22335428)
chr1 (516-558)||(3481591-3481633)
chr1 (516-554)||(3693789-3693827)
chr1 (516-558)||(24571614-24571656)
chr1 (513-555)||(34848503-34848545)
chr1 (516-557)||(5280661-5280702)
chr1 (516-557)||(8269358-8269399)
chr1 (516-557)||(13234108-13234149)
chr1 (516-557)||(16307679-16307720)
chr1 (516-557)||(33020033-33020074)
chr1 (516-557)||(41974791-41974832)
chr1 (519-559)||(35778189-35778229)
chr1 (516-559)||(3157705-3157748)
chr1 (516-559)||(10356703-10356745)
chr1 (516-559)||(17139505-17139548)
chr1 (516-559)||(27533273-27533316)
chr1 (516-559)||(32944766-32944809)
chr1 (516-559)||(36467013-36467056)
chr1 (516-559)||(42045360-42045403)
chr1 (516-547)||(46335059-46335090)
chr1 (516-554)||(12268977-12269015)
chr1 (517-554)||(2994789-2994826)
chr1 (516-549)||(6000141-6000174)
chr1 (516-549)||(11681253-11681286)
chr1 (516-549)||(14880858-14880891)
chr1 (516-557)||(16033440-16033481)
chr1 (516-557)||(17651370-17651411)
chr1 (516-557)||(32923848-32923889)
chr1 (516-557)||(33153870-33153911)
[»] chr4 (39 HSPs)
chr4 (516-557)||(37930837-37930878)
chr4 (516-556)||(22630351-22630391)
chr4 (588-668)||(32615775-32615855)
chr4 (516-559)||(43034330-43034373)
chr4 (516-557)||(17729456-17729497)
chr4 (516-556)||(39595928-39595968)
chr4 (716-779)||(7537656-7537719)
chr4 (516-557)||(2431027-2431068)
chr4 (517-554)||(6610294-6610331)
chr4 (516-557)||(10035295-10035336)
chr4 (516-557)||(11949753-11949794)
chr4 (516-557)||(19908722-19908763)
chr4 (516-557)||(21318243-21318284)
chr4 (516-553)||(43155109-43155146)
chr4 (516-557)||(56551582-56551623)
chr4 (519-559)||(836223-836263)
chr4 (516-556)||(19479468-19479508)
chr4 (516-556)||(22164260-22164300)
chr4 (516-556)||(43782296-43782336)
chr4 (516-559)||(9783929-9783972)
chr4 (516-559)||(9946457-9946500)
chr4 (516-559)||(33758792-33758835)
chr4 (516-559)||(47806244-47806287)
chr4 (519-557)||(35305269-35305307)
chr4 (516-554)||(37735819-37735857)
chr4 (516-557)||(8027387-8027428)
chr4 (516-549)||(10564463-10564496)
chr4 (516-557)||(11198358-11198399)
chr4 (516-549)||(13121574-13121607)
chr4 (516-557)||(16432947-16432988)
chr4 (516-557)||(18903748-18903789)
chr4 (520-557)||(21114295-21114332)
chr4 (516-557)||(23247588-23247629)
chr4 (516-556)||(24414613-24414654)
chr4 (516-557)||(24664981-24665022)
chr4 (524-557)||(33037035-33037068)
chr4 (516-557)||(38374987-38375028)
chr4 (516-553)||(40070962-40070999)
chr4 (516-557)||(49041971-49042012)
[»] chr7 (26 HSPs)
chr7 (516-558)||(5579723-5579765)
chr7 (516-559)||(3671854-3671897)
chr7 (516-559)||(7994872-7994915)
chr7 (518-559)||(145550-145591)
chr7 (517-557)||(16971027-16971067)
chr7 (517-557)||(47663373-47663413)
chr7 (516-559)||(2512339-2512382)
chr7 (516-559)||(3584234-3584277)
chr7 (516-559)||(10026024-10026067)
chr7 (516-555)||(19599175-19599214)
chr7 (516-559)||(40187624-40187667)
chr7 (517-559)||(6579649-6579691)
chr7 (517-559)||(21327529-21327571)
chr7 (516-558)||(27833390-27833432)
chr7 (516-554)||(30623002-30623040)
chr7 (516-558)||(35142138-35142180)
chr7 (516-553)||(6225720-6225757)
chr7 (517-546)||(15433460-15433489)
chr7 (516-557)||(16577850-16577891)
chr7 (516-557)||(16587771-16587812)
chr7 (516-557)||(21105633-21105674)
chr7 (516-557)||(27462426-27462467)
chr7 (520-557)||(28736623-28736660)
chr7 (518-559)||(41237912-41237953)
chr7 (517-558)||(41250036-41250077)
chr7 (516-557)||(45088906-45088946)
[»] scaffold0334 (1 HSPs)
scaffold0334 (516-557)||(5212-5253)
[»] chr8 (18 HSPs)
chr8 (516-557)||(7996970-7997011)
chr8 (516-557)||(32944830-32944871)
chr8 (516-559)||(12800888-12800931)
chr8 (516-559)||(43778049-43778092)
chr8 (513-559)||(27044878-27044924)
chr8 (516-556)||(11709016-11709056)
chr8 (516-556)||(24338195-24338235)
chr8 (516-559)||(12748931-12748974)
chr8 (518-557)||(29376933-29376972)
chr8 (517-556)||(29546924-29546963)
chr8 (516-559)||(32051520-32051563)
chr8 (516-558)||(30071505-30071547)
chr8 (516-557)||(2489710-2489751)
chr8 (516-553)||(8442482-8442518)
chr8 (520-557)||(10752443-10752480)
chr8 (516-557)||(19163526-19163567)
chr8 (516-549)||(32944955-32944988)
chr8 (516-557)||(34420852-34420893)
[»] chr6 (24 HSPs)
chr6 (516-557)||(4455586-4455627)
chr6 (516-557)||(15187093-15187134)
chr6 (516-557)||(15473472-15473513)
chr6 (516-554)||(20744168-20744206)
chr6 (516-557)||(9977087-9977128)
chr6 (517-558)||(12440694-12440735)
chr6 (516-557)||(15155765-15155806)
chr6 (516-557)||(17113450-17113491)
chr6 (516-557)||(27834369-27834410)
chr6 (516-557)||(34701177-34701218)
chr6 (515-559)||(2546209-2546253)
chr6 (517-557)||(12306352-12306392)
chr6 (517-557)||(13583580-13583620)
chr6 (516-559)||(12735130-12735173)
chr6 (516-559)||(14049872-14049915)
chr6 (516-559)||(17151266-17151309)
chr6 (516-559)||(27907939-27907982)
chr6 (516-559)||(28758278-28758321)
chr6 (516-554)||(14918293-14918331)
chr6 (516-557)||(8569739-8569780)
chr6 (516-553)||(8809336-8809373)
chr6 (516-557)||(9367431-9367472)
chr6 (516-557)||(17113575-17113615)
chr6 (516-557)||(27080688-27080729)
[»] chr3 (33 HSPs)
chr3 (516-557)||(8075815-8075856)
chr3 (513-557)||(24273650-24273694)
chr3 (516-556)||(45885468-45885508)
chr3 (516-554)||(1111834-1111872)
chr3 (516-557)||(8136622-8136663)
chr3 (516-557)||(22722432-22722473)
chr3 (516-557)||(25441490-25441531)
chr3 (516-557)||(26768431-26768472)
chr3 (516-557)||(27185507-27185548)
chr3 (516-557)||(28430555-28430596)
chr3 (517-557)||(643178-643217)
chr3 (516-548)||(20400107-20400139)
chr3 (517-557)||(29164743-29164783)
chr3 (516-556)||(34899127-34899167)
chr3 (516-559)||(14030723-14030766)
chr3 (516-559)||(38130947-38130990)
chr3 (516-559)||(46093146-46093189)
chr3 (516-554)||(24348417-24348455)
chr3 (516-558)||(25727956-25727998)
chr3 (516-554)||(35347288-35347326)
chr3 (517-555)||(38798891-38798929)
chr3 (516-553)||(2186421-2186458)
chr3 (522-559)||(2194029-2194066)
chr3 (516-557)||(6835841-6835882)
chr3 (516-557)||(7464481-7464522)
chr3 (516-557)||(8238594-8238635)
chr3 (513-558)||(11358261-11358306)
chr3 (516-557)||(12131663-12131704)
chr3 (516-557)||(31138447-31138487)
chr3 (516-553)||(31463514-31463551)
chr3 (516-557)||(32843252-32843293)
chr3 (516-557)||(35863803-35863844)
chr3 (516-557)||(48849753-48849794)
[»] chr2 (35 HSPs)
chr2 (516-557)||(10723969-10724010)
chr2 (516-559)||(9547397-9547440)
chr2 (516-559)||(24592834-24592877)
chr2 (516-559)||(29896282-29896325)
chr2 (520-558)||(8915369-8915407)
chr2 (516-549)||(12413523-12413556)
chr2 (516-549)||(12425583-12425616)
chr2 (516-557)||(12599855-12599896)
chr2 (516-557)||(23407008-23407049)
chr2 (516-557)||(24581007-24581048)
chr2 (516-557)||(29872162-29872203)
chr2 (516-557)||(31815877-31815918)
chr2 (517-557)||(4138022-4138062)
chr2 (516-548)||(43117189-43117221)
chr2 (516-559)||(10735819-10735862)
chr2 (516-559)||(22267543-22267585)
chr2 (516-559)||(27848188-27848231)
chr2 (516-559)||(29544657-29544700)
chr2 (513-559)||(25625743-25625789)
chr2 (516-557)||(2257001-2257042)
chr2 (516-557)||(10076904-10076945)
chr2 (516-557)||(15447704-15447745)
chr2 (516-557)||(20565065-20565106)
chr2 (516-557)||(23250310-23250351)
chr2 (516-549)||(24393275-24393308)
chr2 (516-557)||(26999140-26999181)
chr2 (516-557)||(27412826-27412867)
chr2 (516-557)||(28120644-28120685)
chr2 (516-557)||(28439559-28439600)
chr2 (516-553)||(29734721-29734758)
chr2 (516-557)||(31543042-31543083)
chr2 (516-549)||(34903547-34903580)
chr2 (516-553)||(40967365-40967402)
chr2 (516-557)||(42451463-42451504)
chr2 (516-553)||(42475104-42475141)
[»] chr5 (13 HSPs)
chr5 (516-559)||(6489037-6489080)
chr5 (516-559)||(15889441-15889484)
chr5 (516-559)||(24408525-24408568)
chr5 (516-557)||(1538798-1538839)
chr5 (516-557)||(13864374-13864415)
chr5 (516-556)||(5107236-5107276)
chr5 (516-559)||(22522789-22522832)
chr5 (518-557)||(42608849-42608888)
chr5 (516-549)||(3222761-3222794)
chr5 (516-557)||(13796360-13796401)
chr5 (516-557)||(16579364-16579405)
chr5 (516-557)||(40446013-40446054)
chr5 (516-557)||(40715939-40715980)
[»] scaffold0122 (1 HSPs)
scaffold0122 (516-557)||(14176-14217)
[»] scaffold0050 (1 HSPs)
scaffold0050 (516-557)||(53370-53411)
[»] scaffold0111 (1 HSPs)
scaffold0111 (522-559)||(39420-39457)
[»] scaffold0016 (1 HSPs)
scaffold0016 (516-557)||(99067-99108)
[»] scaffold0011 (1 HSPs)
scaffold0011 (524-557)||(7760-7793)
[»] scaffold0007 (1 HSPs)
scaffold0007 (516-557)||(221003-221044)


Alignment Details
Target: chr1 (Bit Score: 285; Significance: 1e-159; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 439 - 783
Target Start/End: Original strand, 18043384 - 18043728
Alignment:
Q  439 ctccatagaatataatcaatcatcacaacattatataaattatgaaaaataaattatgcaaatttcaaagatgcattcataatatatgcaaggtctgagg 538  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  18043384 ctccatagaatataatcaatcatcacaaaattatataaattatgaaaaataaattatgcaaatttcaaagatgcactcataatatatgcaaggtctg-gg 18043482  T
Q  539 ttcaaaccccgaccaccaccagnnnnnnnnnnn-tatgcattgaaaactcactgaagccattatcaacaaggtaattgaaagtgtggccatcacaattgt 637  Q
    ||||||||||||||||||||||            |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18043483 ttcaaaccccgaccaccaccagaagaaaaaaaaatatgcattgataactcactgaagccattatcaacaaggtaattgaaagtgtggccatcacaattgt 18043582  T
Q  638 aggtgaatctgttattagaagaaggaagcttttgcaaacattgagaggcaatggtggaaaaatttccagaaaattctgtgtactcagcaagaatcatggt 737  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18043583 aggtgaatctgttattagaagaaggaagcttttgcaaacattgagaggcaatggtggaaaaatttccagaaaattctgtgtactcagcaagaatcatggt 18043682  T
Q  738 cccacgagccacaaagctatagatcaaagtttgttgccccatctcc 783  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18043683 cccacgagccacaaagctatagatcaaagtttgttgccccatctcc 18043728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 8 - 239
Target Start/End: Original strand, 18042767 - 18042998
Alignment:
Q  8 cattcttccgtgactatatcctaccaaaatagaatttgaatcctctctcccacatgcaaaatgcagcaaattcgtttttagtgagagnnnnnnnnnctaa 107  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||         ||||    
T  18042767 cattcttccgtgactatatcctaccaaaatagaatttgaatcatctctcccacatgtaaaatgcagcaaattcatttttagtgagagaaaaaaaaactaa 18042866  T
Q  108 gaatttgctgcaccgctgcattataggagaggatccaaatcctacacgttatgtgagttaaaaaccaatgcattacatgctttcatatgtattgtgttgt 207  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18042867 gaatttgctgcacggctgcattataggggaggatccaaatcctacacgttatgtgagttaaaaaccgatgcattacatgctttcatatgtattgtgttgt 18042966  T
Q  208 tttttagatacaagtctcatgttggttttatt 239  Q
    ||| ||||||||||||||||||||||||||||    
T  18042967 tttctagatacaagtctcatgttggttttatt 18042998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 277 - 396
Target Start/End: Original strand, 18043034 - 18043153
Alignment:
Q  277 ttcttttgaattgtgatttttcagcaacattgcataacaaaaatagtaagctacattagagaggaatggatcaagtattatagtgcatgaatgaactctt 376  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  18043034 ttcttttgaattgtgatttttcagcaacattgcataacaaaaatagtaagctacattagagatgaatggatcaagtattatagtgcatgaataaactctt 18043133  T
Q  377 tcacccttataactcatatt 396  Q
    |||||||||||| |||||||    
T  18043134 tcacccttataattcatatt 18043153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 277 - 336
Target Start/End: Original strand, 18037872 - 18037931
Alignment:
Q  277 ttcttttgaattgtgatttttcagcaacattgcataacaaaaatagtaagctacattaga 336  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18037872 ttcttttgaattgtgatttttcagcaacattgcataacaaaaatagtaagctacattaga 18037931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 18037751 - 18037816
Alignment:
Q  8 cattcttccgtgactatatcctaccaaaatagaatttgaatcctctctcccacatgcaaaatgcag 73  Q
    |||||| ||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  18037751 cattctaccgtgactacatcctaacaaaatagaatttgaatcctctctcccacattcaaaatgcag 18037816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 517 - 559
Target Start/End: Complemental strand, 41950114 - 41950072
Alignment:
Q  517 ataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  41950114 ataatatatgcaaggtctgaggttcgaaccccgaccaccacca 41950072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 28832202 - 28832161
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  28832202 cataatatatgcaaggtctgaggttcaaatcccgaccaccac 28832161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 516 - 556
Target Start/End: Complemental strand, 12522150 - 12522110
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccacca 556  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  12522150 cataatatatacaaggtctgaggttcaaaccccgaccacca 12522110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 516 - 556
Target Start/End: Original strand, 22335388 - 22335428
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccacca 556  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  22335388 cataatatatgcaaggtctgaggttcaaaccccgaacacca 22335428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 516 - 558
Target Start/End: Original strand, 3481591 - 3481633
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacc 558  Q
    |||||||||||||||||||| ||||||||||||| ||||||||    
T  3481591 cataatatatgcaaggtctggggttcaaaccccggccaccacc 3481633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 516 - 554
Target Start/End: Complemental strand, 3693827 - 3693789
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccac 554  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  3693827 cataatatatgtaaggtctgaggttcaaaccccgaccac 3693789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 516 - 558
Target Start/End: Complemental strand, 24571656 - 24571614
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacc 558  Q
    |||||||||||||||||||| ||||||||| ||||||||||||    
T  24571656 cataatatatgcaaggtctggggttcaaactccgaccaccacc 24571614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 513 - 555
Target Start/End: Original strand, 34848503 - 34848545
Alignment:
Q  513 attcataatatatgcaaggtctgaggttcaaaccccgaccacc 555  Q
    |||||||||||||||||||||||||||||||||  ||||||||    
T  34848503 attcataatatatgcaaggtctgaggttcaaacttcgaccacc 34848545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 5280661 - 5280702
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||||| ||||| |||||||||||||||    
T  5280661 cataatatatgcaaggtctggggttcgaaccccgaccaccac 5280702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 8269399 - 8269358
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||| | |||||||||||||||||||||    
T  8269399 cataatatatgcaaggtccggggttcaaaccccgaccaccac 8269358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 13234108 - 13234149
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  13234108 cataatatatgcaaggtctgagaatcaaaccccgaccaccac 13234149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 16307679 - 16307720
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  16307679 cataatatatgcaaggtctggggatcaaaccccgaccaccac 16307720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 33020074 - 33020033
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||||||||||||||||||  |||||||    
T  33020074 cataatatatgcaaggtctgaggttcaaaccccagccaccac 33020033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 41974791 - 41974832
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||||||||||||||| |||||||||||||||| |||||||    
T  41974791 cataatatatgcaaggtttgaggttcaaaccccggccaccac 41974832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 519 - 559
Target Start/End: Complemental strand, 35778229 - 35778189
Alignment:
Q  519 aatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    ||||||||||||||||||||||| ||||||| |||||||||    
T  35778229 aatatatgcaaggtctgaggttcgaaccccggccaccacca 35778189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 559
Target Start/End: Complemental strand, 3157748 - 3157705
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    |||||||||| |||||| ||||||||||||||| ||||||||||    
T  3157748 cataatatatacaaggtttgaggttcaaaccccaaccaccacca 3157705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 559
Target Start/End: Complemental strand, 10356745 - 10356703
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    |||||||||||||||||||| |||||||| ||||||||||||||    
T  10356745 cataatatatgcaaggtctggggttcaaa-cccgaccaccacca 10356703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 559
Target Start/End: Complemental strand, 17139548 - 17139505
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    |||||||||| ||||||| | |||||||||||||||||||||||    
T  17139548 cataatatattcaaggtccggggttcaaaccccgaccaccacca 17139505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 559
Target Start/End: Original strand, 27533273 - 27533316
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    |||||||||||||||||  | |||||||||||||||||||||||    
T  27533273 cataatatatgcaaggttcggggttcaaaccccgaccaccacca 27533316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 559
Target Start/End: Original strand, 32944766 - 32944809
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    |||||||||||||| ||||| ||||| |||||||||||||||||    
T  32944766 cataatatatgcaacgtctggggttcgaaccccgaccaccacca 32944809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 559
Target Start/End: Complemental strand, 36467056 - 36467013
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    ||||||||||||||||| | ||||||||| ||||||||||||||    
T  36467056 cataatatatgcaaggtataaggttcaaatcccgaccaccacca 36467013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 559
Target Start/End: Complemental strand, 42045403 - 42045360
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    ||||||||||||||||||||  |||||||||||| |||||||||    
T  42045403 cataatatatgcaaggtctggagttcaaaccccggccaccacca 42045360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 547
Target Start/End: Complemental strand, 46335090 - 46335059
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccc 547  Q
    ||||||||||||||||||||||||||||||||    
T  46335090 cataatatatgcaaggtctgaggttcaaaccc 46335059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 516 - 554
Target Start/End: Complemental strand, 12269015 - 12268977
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccac 554  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  12269015 cataatatatgcaaggtccggggttcaaaccccgaccac 12268977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 554
Target Start/End: Original strand, 2994789 - 2994826
Alignment:
Q  517 ataatatatgcaaggtctgaggttcaaaccccgaccac 554  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  2994789 ataatatatgcaaggtccggggttcaaaccccgaccac 2994826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 549
Target Start/End: Complemental strand, 6000174 - 6000141
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccg 549  Q
    |||||||||||||||||| |||||||||||||||    
T  6000174 cataatatatgcaaggtccgaggttcaaaccccg 6000141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 549
Target Start/End: Original strand, 11681253 - 11681286
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccg 549  Q
    |||||||||||||||||||| |||||||||||||    
T  11681253 cataatatatgcaaggtctggggttcaaaccccg 11681286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 549
Target Start/End: Original strand, 14880858 - 14880891
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccg 549  Q
    ||||||||||||||||||||||||||||| ||||    
T  14880858 cataatatatgcaaggtctgaggttcaaatcccg 14880891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 16033481 - 16033440
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||||| ||||||||| ||| |||||||    
T  16033481 cataatatatgcaaggtctggggttcaaactccggccaccac 16033440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 17651411 - 17651370
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||| |||||||||||||||||||||||||| | |||||||    
T  17651411 cataaaatatgcaaggtctgaggttcaaaccctggccaccac 17651370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 32923848 - 32923889
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||||||||| ||||||||| |||||||| |||||||||||    
T  32923848 cataatatatgaaaggtctgaagttcaaactccgaccaccac 32923889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 33153911 - 33153870
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||||||||| |||||| |||||||||||||||| ||||||    
T  33153911 cataatatatgtaaggtccgaggttcaaaccccgaacaccac 33153870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 37930878 - 37930837
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  37930878 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 37930837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 516 - 556
Target Start/End: Complemental strand, 22630391 - 22630351
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccacca 556  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  22630391 cataatatatgcaaggtctgaggttcaaaccccgaccacca 22630351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 588 - 668
Target Start/End: Original strand, 32615775 - 32615855
Alignment:
Q  588 actgaagccattatcaacaaggtaattgaaagtgtggccatcacaattgtaggtgaatctgttattagaagaaggaagctt 668  Q
    |||| |||||||||| || ||||| ||||| |||||||||||||||||||| |||||| |||| |||||||  ||||||||    
T  32615775 actgtagccattatcgacgaggtagttgaaggtgtggccatcacaattgtaagtgaatttgttgttagaagctggaagctt 32615855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 516 - 559
Target Start/End: Complemental strand, 43034373 - 43034330
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  43034373 cataatatatgcaaggtctgaggttcaaaccccggccaccacca 43034330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 17729456 - 17729497
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  17729456 cataatatatgcaaggtctggggttcaaaccccgaccaccac 17729497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 516 - 556
Target Start/End: Complemental strand, 39595968 - 39595928
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccacca 556  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  39595968 cataatatatgcaaggtctgaggttcaaactccgaccacca 39595928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 716 - 779
Target Start/End: Original strand, 7537656 - 7537719
Alignment:
Q  716 tgtactcagcaagaatcatggtcccacgagccacaaagctatagatcaaagtttgttgccccat 779  Q
    ||||||| ||||||||||  || |||||||||||||||||||||||||| | |||||| |||||    
T  7537656 tgtactccgcaagaatcaccgtaccacgagccacaaagctatagatcaatgattgttgtcccat 7537719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 2431027 - 2431068
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||| ||||||||||| ||||||||||||||||||||||||    
T  2431027 cataaaatatgcaaggtatgaggttcaaaccccgaccaccac 2431068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 554
Target Start/End: Original strand, 6610294 - 6610331
Alignment:
Q  517 ataatatatgcaaggtctgaggttcaaaccccgaccac 554  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  6610294 ataatatatgcaaggtctggggttcaaaccccgaccac 6610331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 10035295 - 10035336
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||||| ||||||||||||| |||||||    
T  10035295 cataatatatgcaaggtctggggttcaaaccccggccaccac 10035336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 11949794 - 11949753
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||| | |||||||||||||||||||||    
T  11949794 cataatatatgcaaggtccggggttcaaaccccgaccaccac 11949753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 19908722 - 19908763
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||| ||||||| |||||||||||||||    
T  19908722 cataatatatgcaaggtccgaggttcgaaccccgaccaccac 19908763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 21318284 - 21318243
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||||  |||||||||||||||||||||    
T  21318284 cataatatatgcaaggtctagggttcaaaccccgaccaccac 21318243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 553
Target Start/End: Original strand, 43155109 - 43155146
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgacca 553  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  43155109 cataatatatgcaagatctgaggttcaaaccccgacca 43155146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 56551623 - 56551582
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||| ||||||||||||||| |||||||    
T  56551623 cataatatatgcaaggtccgaggttcaaaccccggccaccac 56551582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 519 - 559
Target Start/End: Complemental strand, 836263 - 836223
Alignment:
Q  519 aatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  836263 aatatatgcaaggtccgaggttcaaactccgaccaccacca 836223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 516 - 556
Target Start/End: Complemental strand, 19479508 - 19479468
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccacca 556  Q
    |||||||||||||||||| | ||||||||||||||||||||    
T  19479508 cataatatatgcaaggtccggggttcaaaccccgaccacca 19479468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 516 - 556
Target Start/End: Complemental strand, 22164300 - 22164260
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccacca 556  Q
    ||||||||||| |||||||| ||||||||||||||||||||    
T  22164300 cataatatatgtaaggtctggggttcaaaccccgaccacca 22164260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 516 - 556
Target Start/End: Complemental strand, 43782336 - 43782296
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccacca 556  Q
    |||||||||||||||||||| |||||||||| |||||||||    
T  43782336 cataatatatgcaaggtctgcggttcaaacctcgaccacca 43782296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 559
Target Start/End: Original strand, 9783929 - 9783972
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    ||||||||||| ||||||||||||||||||| || |||||||||    
T  9783929 cataatatatgtaaggtctgaggttcaaacctcggccaccacca 9783972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 559
Target Start/End: Original strand, 9946457 - 9946500
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    ||||| |||||||||||| | |||||||||||||||||||||||    
T  9946457 cataaaatatgcaaggtccggggttcaaaccccgaccaccacca 9946500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 559
Target Start/End: Complemental strand, 33758835 - 33758792
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    ||||||||||||||||||||||||| ||| ||| ||||||||||    
T  33758835 cataatatatgcaaggtctgaggtttaaatcccaaccaccacca 33758792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 559
Target Start/End: Complemental strand, 47806287 - 47806244
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    |||||||||||||||||||| ||||| |||||||| ||||||||    
T  47806287 cataatatatgcaaggtctggggttcgaaccccgaacaccacca 47806244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 519 - 557
Target Start/End: Original strand, 35305269 - 35305307
Alignment:
Q  519 aatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||| ||| ||||||||||||||||||||    
T  35305269 aatatatgcaaggtttgaagttcaaaccccgaccaccac 35305307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 516 - 554
Target Start/End: Original strand, 37735819 - 37735857
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccac 554  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  37735819 cataatatatgtaaggtctgaggttcaaacctcgaccac 37735857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 8027428 - 8027387
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||||||||||||| || | |||||||||||||||||||||    
T  8027428 cataatatatgcaagatcgggggttcaaaccccgaccaccac 8027387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 549
Target Start/End: Complemental strand, 10564496 - 10564463
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccg 549  Q
    ||||||||||| ||||||||||||||||||||||    
T  10564496 cataatatatgtaaggtctgaggttcaaaccccg 10564463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 11198358 - 11198399
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||| | ||||||||||||| |||||||    
T  11198358 cataatatatgcaaggtccggggttcaaaccccggccaccac 11198399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 549
Target Start/End: Original strand, 13121574 - 13121607
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccg 549  Q
    ||||||||||||||||||||| ||||||||||||    
T  13121574 cataatatatgcaaggtctgaagttcaaaccccg 13121607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 16432988 - 16432947
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||||||||  ||| ||||||||||||||||||||||||||    
T  16432988 cataatatatataagatctgaggttcaaaccccgaccaccac 16432947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 18903789 - 18903748
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||||||||| |||||||| ||||||||||| |||||||||    
T  18903789 cataatatatgtaaggtctggggttcaaaccctgaccaccac 18903748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 520 - 557
Target Start/End: Complemental strand, 21114332 - 21114295
Alignment:
Q  520 atatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||| | |||||||||||||||||||||    
T  21114332 atatatgcaaggtccggggttcaaaccccgaccaccac 21114295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 23247629 - 23247588
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||||| |||| |||||||| |||||||    
T  23247629 cataatatatgcaaggtctggggtttaaaccccggccaccac 23247588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 556
Target Start/End: Original strand, 24414613 - 24414654
Alignment:
Q  516 cataatatatgcaaggtctgaggttc-aaaccccgaccacca 556  Q
    |||||||||||||||||||| ||||| |||||||||||||||    
T  24414613 cataatatatgcaaggtctggggttcaaaaccccgaccacca 24414654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 24665022 - 24664981
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||| | ||||| |||||||||||||||    
T  24665022 cataatatatgcaaggtccggggttcgaaccccgaccaccac 24664981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 524 - 557
Target Start/End: Original strand, 33037035 - 33037068
Alignment:
Q  524 atgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||| |||||||||||||||||||||||    
T  33037035 atgcaaggtccgaggttcaaaccccgaccaccac 33037068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 38374987 - 38375028
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||||||||||||||||||  |||||||||||| |||||||    
T  38374987 cataatatatgcaaggtctggagttcaaaccccggccaccac 38375028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 553
Target Start/End: Complemental strand, 40070999 - 40070962
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgacca 553  Q
    |||||||||||||||||| || ||||||||||||||||    
T  40070999 cataatatatgcaaggtccgaagttcaaaccccgacca 40070962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 49042012 - 49041971
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||| | ||||||||||||| |||||||    
T  49042012 cataatatatgcaaggtccggggttcaaaccccggccaccac 49041971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.000000000001; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 516 - 558
Target Start/End: Original strand, 5579723 - 5579765
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacc 558  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  5579723 cataatatatgcaaggtctggggttcaaaccccgaccaccacc 5579765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 516 - 559
Target Start/End: Original strand, 3671854 - 3671897
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    ||||||||||||||||||||  ||||||||||||||||||||||    
T  3671854 cataatatatgcaaggtctggagttcaaaccccgaccaccacca 3671897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 516 - 559
Target Start/End: Complemental strand, 7994915 - 7994872
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    ||||||||||| |||||||| |||||||||||||||||||||||    
T  7994915 cataatatatgtaaggtctggggttcaaaccccgaccaccacca 7994872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 518 - 559
Target Start/End: Original strand, 145550 - 145591
Alignment:
Q  518 taatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    |||||||||||||||| | |||||||||||||||||||||||    
T  145550 taatatatgcaaggtccggggttcaaaccccgaccaccacca 145591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 517 - 557
Target Start/End: Original strand, 16971027 - 16971067
Alignment:
Q  517 ataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  16971027 ataatatatgtaaggtctgagattcaaaccccgaccaccac 16971067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 517 - 557
Target Start/End: Complemental strand, 47663413 - 47663373
Alignment:
Q  517 ataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||||||| |||||||||| ||||||||||||||||||||    
T  47663413 ataatatatacaaggtctgaagttcaaaccccgaccaccac 47663373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 559
Target Start/End: Original strand, 2512339 - 2512382
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    |||||||||||||||||  ||||||||||||||| |||||||||    
T  2512339 cataatatatgcaaggtacgaggttcaaaccccggccaccacca 2512382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 559
Target Start/End: Original strand, 3584234 - 3584277
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    |||||||||||||||||  ||| |||||||||||||||||||||    
T  3584234 cataatatatgcaaggtacgagattcaaaccccgaccaccacca 3584277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 559
Target Start/End: Original strand, 10026024 - 10026067
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    ||||| ||||||||||| || |||||||||||||||||||||||    
T  10026024 cataaaatatgcaaggtatggggttcaaaccccgaccaccacca 10026067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 555
Target Start/End: Original strand, 19599175 - 19599214
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccacc 555  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  19599175 cataatatatgcaaggtccggggttcaaaccccgaccacc 19599214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 559
Target Start/End: Complemental strand, 40187667 - 40187624
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    ||||||||||| |||||||| |||||||||||||| ||||||||    
T  40187667 cataatatatgtaaggtctgcggttcaaaccccgaacaccacca 40187624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 517 - 559
Target Start/End: Original strand, 6579649 - 6579691
Alignment:
Q  517 ataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    |||| ||||||||||| | ||||||||||||||||||||||||    
T  6579649 ataaaatatgcaaggtgtaaggttcaaaccccgaccaccacca 6579691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 517 - 559
Target Start/End: Complemental strand, 21327571 - 21327529
Alignment:
Q  517 ataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    |||||||||||||||| || ||||||||| |||||||||||||    
T  21327571 ataatatatgcaaggtttggggttcaaactccgaccaccacca 21327529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 516 - 558
Target Start/End: Complemental strand, 27833432 - 27833390
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacc 558  Q
    ||||||||||| |||||| | ||||||||||||||||||||||    
T  27833432 cataatatatgtaaggtccggggttcaaaccccgaccaccacc 27833390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 516 - 554
Target Start/End: Original strand, 30623002 - 30623040
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccac 554  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  30623002 cataatatatgcaaggtctatggttcaaaccccgaccac 30623040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 516 - 558
Target Start/End: Complemental strand, 35142180 - 35142138
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacc 558  Q
    |||||||||||||| || |||||||| ||||||||||||||||    
T  35142180 cataatatatgcaaagtttgaggttcgaaccccgaccaccacc 35142138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 553
Target Start/End: Complemental strand, 6225757 - 6225720
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgacca 553  Q
    ||||||| |||||||||||| |||||||||||||||||    
T  6225757 cataataaatgcaaggtctgtggttcaaaccccgacca 6225720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 546
Target Start/End: Complemental strand, 15433489 - 15433460
Alignment:
Q  517 ataatatatgcaaggtctgaggttcaaacc 546  Q
    ||||||||||||||||||||||||||||||    
T  15433489 ataatatatgcaaggtctgaggttcaaacc 15433460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 16577891 - 16577850
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||||| |||||||||| || |||||||    
T  16577891 cataatatatgcaaggtctggggttcaaacctcggccaccac 16577850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 16587771 - 16587812
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||||| |||||||||| || |||||||    
T  16587771 cataatatatgcaaggtctggggttcaaacctcggccaccac 16587812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 21105633 - 21105674
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||  ||||||| |||||||||||||||    
T  21105633 cataatatatgcaaggttcgaggttcgaaccccgaccaccac 21105674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 27462467 - 27462426
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||| | ||||||||||||| |||||||    
T  27462467 cataatatatgcaaggtccggggttcaaaccccggccaccac 27462426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 520 - 557
Target Start/End: Complemental strand, 28736660 - 28736623
Alignment:
Q  520 atatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||| |||||||||||||| ||||||||    
T  28736660 atatatgcaaggtccgaggttcaaaccccaaccaccac 28736623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 518 - 559
Target Start/End: Complemental strand, 41237953 - 41237912
Alignment:
Q  518 taatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    |||||||||||||||  |||||||||||| ||||||||||||    
T  41237953 taatatatgcaaggttcgaggttcaaacctcgaccaccacca 41237912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 558
Target Start/End: Complemental strand, 41250077 - 41250036
Alignment:
Q  517 ataatatatgcaaggtctgaggttcaaaccccgaccaccacc 558  Q
    ||||||||||||||||| ||||||||| |||||| |||||||    
T  41250077 ataatatatgcaaggtccgaggttcaagccccgaacaccacc 41250036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 45088906 - 45088946
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||| | |||||||||||||||||||||    
T  45088906 cataatatatgcaaggtcgg-ggttcaaaccccgaccaccac 45088946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 5212 - 5253
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  5212 cataatatatgcaaggtctgaggttcaaaccccaaccaccac 5253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000005; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 7996970 - 7997011
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  7996970 cataatatatgcaaggtctggggttcaaaccccgaccaccac 7997011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 32944871 - 32944830
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  32944871 cataaaatatgcaaggtctgaggttcaaaccccgaccaccac 32944830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 516 - 559
Target Start/End: Complemental strand, 12800931 - 12800888
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    |||||||||||||||||| | |||||||||||||||||||||||    
T  12800931 cataatatatgcaaggtccggggttcaaaccccgaccaccacca 12800888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 516 - 559
Target Start/End: Original strand, 43778049 - 43778092
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    ||||| |||||||||||||||||||||||| |||||||||||||    
T  43778049 cataaaatatgcaaggtctgaggttcaaactccgaccaccacca 43778092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 513 - 559
Target Start/End: Complemental strand, 27044924 - 27044878
Alignment:
Q  513 attcataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    |||||||||||||| ||||||||||||||||||||||  ||||||||    
T  27044924 attcataatatatgtaaggtctgaggttcaaaccccggacaccacca 27044878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 516 - 556
Target Start/End: Original strand, 11709016 - 11709056
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccacca 556  Q
    |||||||||||||||||| || |||||||||||||||||||    
T  11709016 cataatatatgcaaggtccgaagttcaaaccccgaccacca 11709056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 516 - 556
Target Start/End: Complemental strand, 24338235 - 24338195
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccacca 556  Q
    ||||| ||||||||||||||| |||||||||||||||||||    
T  24338235 cataaaatatgcaaggtctgaagttcaaaccccgaccacca 24338195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 559
Target Start/End: Original strand, 12748931 - 12748974
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    |||||||||||||||||| | ||||||||||||| |||||||||    
T  12748931 cataatatatgcaaggtccggggttcaaaccccggccaccacca 12748974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 518 - 557
Target Start/End: Original strand, 29376933 - 29376972
Alignment:
Q  518 taatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  29376933 taatatatgcaaggtctggagttcaaaccccgaccaccac 29376972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 517 - 556
Target Start/End: Original strand, 29546924 - 29546963
Alignment:
Q  517 ataatatatgcaaggtctgaggttcaaaccccgaccacca 556  Q
    ||||||||||||||||||| ||||||||||| ||||||||    
T  29546924 ataatatatgcaaggtctggggttcaaaccctgaccacca 29546963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 559
Target Start/End: Complemental strand, 32051563 - 32051520
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    |||||||||||||||||| | ||||||||||||| |||||||||    
T  32051563 cataatatatgcaaggtccggggttcaaaccccggccaccacca 32051520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 516 - 558
Target Start/End: Complemental strand, 30071547 - 30071505
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacc 558  Q
    |||||||||| |||||| |||||||| ||||||||||||||||    
T  30071547 cataatatatacaaggtttgaggttctaaccccgaccaccacc 30071505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 2489710 - 2489751
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||| |||||||||||||||| || |||||||    
T  2489710 cataatatatgcaacgtctgaggttcaaacctcggccaccac 2489751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 553
Target Start/End: Complemental strand, 8442518 - 8442482
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgacca 553  Q
    |||||||||||||||||||||||||| |||||||||||    
T  8442518 cataatatatgcaaggtctgaggttc-aaccccgacca 8442482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 520 - 557
Target Start/End: Original strand, 10752443 - 10752480
Alignment:
Q  520 atatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||| ||||||||| |||||||||||||||||||||    
T  10752443 atatattcaaggtctggggttcaaaccccgaccaccac 10752480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 19163567 - 19163526
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||| ||||||||||| | |||||||||||||||||||||    
T  19163567 cataatttatgcaaggtccggggttcaaaccccgaccaccac 19163526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 549
Target Start/End: Original strand, 32944955 - 32944988
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccg 549  Q
    ||||||||||||||||||||| ||||||||||||    
T  32944955 cataatatatgcaaggtctgaagttcaaaccccg 32944988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 34420893 - 34420852
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||| ||||||||||| ||||||||||||| ||||||||||    
T  34420893 cataaaatatgcaaggtttgaggttcaaacctcgaccaccac 34420852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000005; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 4455627 - 4455586
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  4455627 cataatatatgcaaggtctggggttcaaaccccgaccaccac 4455586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 15187093 - 15187134
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  15187093 cataatatatgcaaggtccgaggttcaaaccccgaccaccac 15187134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 15473513 - 15473472
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  15473513 cataatatatgcaaggtccgaggttcaaaccccgaccaccac 15473472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 516 - 554
Target Start/End: Original strand, 20744168 - 20744206
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccac 554  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  20744168 cataatatatgcaaggtctggggttcaaaccccgaccac 20744206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 9977087 - 9977128
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||||| ||||||||||| |||||||||    
T  9977087 cataatatatgcaaggtctggggttcaaaccctgaccaccac 9977128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 558
Target Start/End: Original strand, 12440694 - 12440735
Alignment:
Q  517 ataatatatgcaaggtctgaggttcaaaccccgaccaccacc 558  Q
    ||||||||||||||||||| |||||||||| |||||||||||    
T  12440694 ataatatatgcaaggtctggggttcaaacctcgaccaccacc 12440735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 15155765 - 15155806
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||||| |||||||||| ||||||||||    
T  15155765 cataatatatgcaaggtctggggttcaaaccacgaccaccac 15155806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 17113491 - 17113450
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||||||||||||||||||||||||||||  ||||||||||    
T  17113491 cataatatatgcaaggtctgaggttcaaacttcgaccaccac 17113450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 27834369 - 27834410
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||||| ||||||||||| |||||||||    
T  27834369 cataatatatgcaaggtctggggttcaaacccggaccaccac 27834410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 34701177 - 34701218
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||||||||||||||| ||| |||||||    
T  34701177 cataatatatgcaaggtctgaggttcaaactccggccaccac 34701218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 515 - 559
Target Start/End: Original strand, 2546209 - 2546253
Alignment:
Q  515 tcataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    ||||||||||||||||||  | |||||||||||||||||||||||    
T  2546209 tcataatatatgcaaggtacggggttcaaaccccgaccaccacca 2546253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 517 - 557
Target Start/End: Original strand, 12306352 - 12306392
Alignment:
Q  517 ataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||| |||||||||||||||||||||| |||||||    
T  12306352 ataatatatgtaaggtctgaggttcaaaccccggccaccac 12306392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 517 - 557
Target Start/End: Original strand, 13583580 - 13583620
Alignment:
Q  517 ataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||| || |||||||||||||||||||||||    
T  13583580 ataatatatgcaagctcagaggttcaaaccccgaccaccac 13583620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 559
Target Start/End: Complemental strand, 12735173 - 12735130
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    ||||||||||||||||| ||| || |||||||||||||||||||    
T  12735173 cataatatatgcaaggtttgatgtccaaaccccgaccaccacca 12735130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 559
Target Start/End: Complemental strand, 14049915 - 14049872
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    |||||||||||||||||||||||||||||  ||| |||||||||    
T  14049915 cataatatatgcaaggtctgaggttcaaattccggccaccacca 14049872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 559
Target Start/End: Original strand, 17151266 - 17151309
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    |||||||||||||||||||| |||||||||| || |||||||||    
T  17151266 cataatatatgcaaggtctggggttcaaacctcggccaccacca 17151309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 559
Target Start/End: Complemental strand, 27907982 - 27907939
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    ||||| |||||||||||||| ||||||||||||| |||||||||    
T  27907982 cataaaatatgcaaggtctggggttcaaaccccggccaccacca 27907939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 559
Target Start/End: Complemental strand, 28758321 - 28758278
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    |||||||||||||| ||| |||||||||||||||| ||||||||    
T  28758321 cataatatatgcaaagtccgaggttcaaaccccgaacaccacca 28758278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 516 - 554
Target Start/End: Complemental strand, 14918331 - 14918293
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccac 554  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  14918331 cataatatatacaaggtctggggttcaaaccccgaccac 14918293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 8569739 - 8569780
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||| | ||||||||||||| |||||||    
T  8569739 cataatatatgcaaggtccggggttcaaaccccggccaccac 8569780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 553
Target Start/End: Original strand, 8809336 - 8809373
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgacca 553  Q
    ||||||||||||||| || |||||||||||||||||||    
T  8809336 cataatatatgcaagatccgaggttcaaaccccgacca 8809373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 9367431 - 9367472
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||| |||||||||||||| | |||||||||||||||||||    
T  9367431 cataaaatatgcaaggtctgggattcaaaccccgaccaccac 9367472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 17113615 - 17113575
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||||||||| |||||| |||||||||||||||||||||||    
T  17113615 cataatatatgtaaggtc-gaggttcaaaccccgaccaccac 17113575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 27080729 - 27080688
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||||||||||||| |||| | |||||||||||||||||||    
T  27080729 cataatatatgcaagctctgggattcaaaccccgaccaccac 27080688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000005; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 8075815 - 8075856
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  8075815 cataatatatgcaaggtctgaggttcaaaccccggccaccac 8075856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 513 - 557
Target Start/End: Original strand, 24273650 - 24273694
Alignment:
Q  513 attcataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||||||||||||||||||||||||||  |||||||||||||||    
T  24273650 attcataatatatgcaaggtctgaggtttgaaccccgaccaccac 24273694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 516 - 556
Target Start/End: Complemental strand, 45885508 - 45885468
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccacca 556  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  45885508 cataatatatgcaaggtctgaggttcaaaccccggccacca 45885468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 516 - 554
Target Start/End: Complemental strand, 1111872 - 1111834
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccac 554  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  1111872 cataatatatgcaaggtctggggttcaaaccccgaccac 1111834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 8136663 - 8136622
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  8136663 cataatatatgcaaggtccaaggttcaaaccccgaccaccac 8136622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 22722432 - 22722473
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||| |||||||||||| |||||||||||||||||||||||    
T  22722432 cataaaatatgcaaggtccgaggttcaaaccccgaccaccac 22722473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 25441531 - 25441490
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||||| ||||||||||||| |||||||    
T  25441531 cataatatatgcaaggtctggggttcaaaccccggccaccac 25441490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 26768431 - 26768472
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||| |||||||||||||||| |||||||||||||||||||    
T  26768431 cataaaatatgcaaggtctgagcttcaaaccccgaccaccac 26768472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 27185507 - 27185548
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||||| |||||||||| ||||||||||    
T  27185507 cataatatatgcaaggtctggggttcaaacctcgaccaccac 27185548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 28430596 - 28430555
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||||||||||||||| | |||||||||    
T  28430596 cataatatatgcaaggtctgaggttcaaactctgaccaccac 28430555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 517 - 557
Target Start/End: Complemental strand, 643217 - 643178
Alignment:
Q  517 ataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  643217 ataatatatgcaaggt-tgaggttcaaaccccgaccaccac 643178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 516 - 548
Target Start/End: Original strand, 20400107 - 20400139
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaacccc 548  Q
    |||||||||||||||||||||||||||||||||    
T  20400107 cataatatatgcaaggtctgaggttcaaacccc 20400139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 517 - 557
Target Start/End: Complemental strand, 29164783 - 29164743
Alignment:
Q  517 ataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||||||||||| ||||| |||||||||||||||||||||    
T  29164783 ataatatatgcaaagtctggggttcaaaccccgaccaccac 29164743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 516 - 556
Target Start/End: Original strand, 34899127 - 34899167
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccacca 556  Q
    |||||||||||||||||| | ||||||||||||||||||||    
T  34899127 cataatatatgcaaggtccggggttcaaaccccgaccacca 34899167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 559
Target Start/End: Complemental strand, 14030766 - 14030723
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||    
T  14030766 cataatatatgcaaggtttggagttcaaaccccgaccaccacca 14030723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 559
Target Start/End: Complemental strand, 38130990 - 38130947
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    |||||||||||||||||| | ||||||||||||| |||||||||    
T  38130990 cataatatatgcaaggtccggggttcaaaccccggccaccacca 38130947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 559
Target Start/End: Original strand, 46093146 - 46093189
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    ||||||||||||||||| || |||| ||||||||||||||||||    
T  46093146 cataatatatgcaaggtttgtggtttaaaccccgaccaccacca 46093189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 516 - 554
Target Start/End: Original strand, 24348417 - 24348455
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccac 554  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  24348417 cataatatatgcaaggtcagaggttcaaactccgaccac 24348455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 516 - 558
Target Start/End: Complemental strand, 25727998 - 25727956
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacc 558  Q
    |||||||||||||||||| | |||||||| |||||||||||||    
T  25727998 cataatatatgcaaggtccggggttcaaatcccgaccaccacc 25727956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 516 - 554
Target Start/End: Complemental strand, 35347326 - 35347288
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccac 554  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  35347326 cataatatatgcaaggtctggggttcaaacctcgaccac 35347288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 517 - 555
Target Start/End: Original strand, 38798891 - 38798929
Alignment:
Q  517 ataatatatgcaaggtctgaggttcaaaccccgaccacc 555  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  38798891 ataatatatgcaaggtccgaggttcaaatcccgaccacc 38798929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 553
Target Start/End: Complemental strand, 2186458 - 2186421
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgacca 553  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  2186458 cataatatatgtaaggtctggggttcaaaccccgacca 2186421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 522 - 559
Target Start/End: Original strand, 2194029 - 2194066
Alignment:
Q  522 atatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  2194029 atatgcaaagtctgaggttcaaacctcgaccaccacca 2194066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 6835882 - 6835841
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||||  ||||| |||||||||||||||    
T  6835882 cataatatatgcaaggtctagggttcgaaccccgaccaccac 6835841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 7464522 - 7464481
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||||||||| |||||| | |||||||||||||||||||||    
T  7464522 cataatatatgtaaggtccggggttcaaaccccgaccaccac 7464481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 8238594 - 8238635
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||||| ||||||||| ||| |||||||    
T  8238594 cataatatatgcaaggtctggggttcaaactccggccaccac 8238635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 513 - 558
Target Start/End: Original strand, 11358261 - 11358306
Alignment:
Q  513 attcataatatatgcaaggtctgaggttcaaaccccgaccaccacc 558  Q
    |||||||||||||||||| || | ||||||||||||| ||||||||    
T  11358261 attcataatatatgcaagatccggggttcaaaccccggccaccacc 11358306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 12131704 - 12131663
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||| |||||| ||||||| ||||||||||||||||    
T  12131704 cataatatatacaaggtatgaggtttaaaccccgaccaccac 12131663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 31138447 - 31138487
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||||||||||||| ||| ||||||||||||||||||||||    
T  31138447 cataatatatgcaagatct-aggttcaaaccccgaccaccac 31138487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 553
Target Start/End: Original strand, 31463514 - 31463551
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgacca 553  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  31463514 cataatatatgtaaggtctgaggttcaaacccccacca 31463551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 32843293 - 32843252
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||| |||||||||||||| ||||||||||||| |||||||    
T  32843293 cataaaatatgcaaggtctggggttcaaaccccggccaccac 32843252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 35863844 - 35863803
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||||| |||||||||| || |||||||    
T  35863844 cataatatatgcaaggtctggggttcaaacctcggccaccac 35863803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 48849794 - 48849753
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||| | ||||||||||||| |||||||    
T  48849794 cataatatatgcaaggtccggggttcaaaccccggccaccac 48849753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000005; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 10723969 - 10724010
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  10723969 cataatatatgcaaggtctgaggttcaaaccccggccaccac 10724010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 516 - 559
Target Start/End: Complemental strand, 9547440 - 9547397
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    ||||||||||||||||| || |||||||||||||||||||||||    
T  9547440 cataatatatgcaaggtttggggttcaaaccccgaccaccacca 9547397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 516 - 559
Target Start/End: Complemental strand, 24592877 - 24592834
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    |||||||||||||||||||| ||||||||||||| |||||||||    
T  24592877 cataatatatgcaaggtctggggttcaaaccccggccaccacca 24592834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 516 - 559
Target Start/End: Complemental strand, 29896325 - 29896282
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    ||||||||||||||||| || |||||||||||||||||||||||    
T  29896325 cataatatatgcaaggtttggggttcaaaccccgaccaccacca 29896282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 520 - 558
Target Start/End: Complemental strand, 8915407 - 8915369
Alignment:
Q  520 atatatgcaaggtctgaggttcaaaccccgaccaccacc 558  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  8915407 atatatgcaaggtctgaggtttaaaccccgaccaccacc 8915369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 549
Target Start/End: Original strand, 12413523 - 12413556
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccg 549  Q
    ||||||||||||||||||||||||||||||||||    
T  12413523 cataatatatgcaaggtctgaggttcaaaccccg 12413556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 549
Target Start/End: Original strand, 12425583 - 12425616
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccg 549  Q
    ||||||||||||||||||||||||||||||||||    
T  12425583 cataatatatgcaaggtctgaggttcaaaccccg 12425616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 12599896 - 12599855
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||||| ||||| |||||||||||||||    
T  12599896 cataatatatgcaaggtctggggttcgaaccccgaccaccac 12599855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 23407049 - 23407008
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||||| ||||||||||| |||||||||    
T  23407049 cataatatatgcaaggtctggggttcaaaccctgaccaccac 23407008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 24581048 - 24581007
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  24581048 cataatatatgcaaggttcgaggttcaaaccccgaccaccac 24581007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 29872203 - 29872162
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||||||||||||||||| ||||||||||| ||||||||||    
T  29872203 cataatatatgcaaggtctaaggttcaaacctcgaccaccac 29872162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 31815918 - 31815877
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||| | |||||||||||||||||||||    
T  31815918 cataatatatgcaaggtccggggttcaaaccccgaccaccac 31815877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 517 - 557
Target Start/End: Original strand, 4138022 - 4138062
Alignment:
Q  517 ataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||||||||||||||| ||| |||||||||||||||||||    
T  4138022 ataatatatgcaaggtccgagattcaaaccccgaccaccac 4138062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 516 - 548
Target Start/End: Complemental strand, 43117221 - 43117189
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaacccc 548  Q
    |||||||||||||||||||||||||||||||||    
T  43117221 cataatatatgcaaggtctgaggttcaaacccc 43117189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 559
Target Start/End: Complemental strand, 10735862 - 10735819
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    |||||||||||||||||| | ||||||||||||| |||||||||    
T  10735862 cataatatatgcaaggtccggggttcaaaccccggccaccacca 10735819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 559
Target Start/End: Original strand, 22267543 - 22267585
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    ||||||||||||||||| |||| |||||||||||||||||||||    
T  22267543 cataatatatgcaaggtttgag-ttcaaaccccgaccaccacca 22267585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 559
Target Start/End: Original strand, 27848188 - 27848231
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    |||||||||||||||||| | ||||||||||||| |||||||||    
T  27848188 cataatatatgcaaggtccggggttcaaaccccggccaccacca 27848231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 559
Target Start/End: Original strand, 29544657 - 29544700
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    |||||||||||||||||| | ||||||||||||| |||||||||    
T  29544657 cataatatatgcaaggtccggggttcaaaccccggccaccacca 29544700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 513 - 559
Target Start/End: Original strand, 25625743 - 25625789
Alignment:
Q  513 attcataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    |||||||||||||| |||||| | ||||||||||| |||||||||||    
T  25625743 attcataatatatgtaaggtccggggttcaaacccggaccaccacca 25625789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 2257001 - 2257042
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||||| ||||| ||||||| |||||||    
T  2257001 cataatatatgcaaggtctggggttcgaaccccggccaccac 2257042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 10076904 - 10076945
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||||||||||| | ||||||||||||||||||| ||||||    
T  10076904 cataatatatgcatgatctgaggttcaaaccccgaacaccac 10076945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 15447745 - 15447704
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||||||||||||||||||  |||||||||||| |||||||    
T  15447745 cataatatatgcaaggtctggagttcaaaccccggccaccac 15447704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 20565106 - 20565065
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||| | |||||||||||| ||||||||    
T  20565106 cataatatatgcaaggtccggggttcaaaccccaaccaccac 20565065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 23250351 - 23250310
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||||||||||||||||   |||||||||||||||||||||    
T  23250351 cataatatatgcaaggtccagggttcaaaccccgaccaccac 23250310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 549
Target Start/End: Original strand, 24393275 - 24393308
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccg 549  Q
    |||||||||||||||||||||||||| |||||||    
T  24393275 cataatatatgcaaggtctgaggttcgaaccccg 24393308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 26999140 - 26999181
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||||| ||||||||| ||| |||||||    
T  26999140 cataatatatgcaaggtctgcggttcaaactccggccaccac 26999181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 27412867 - 27412826
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||||||||| ||||||||  ||||||||||||||||||||    
T  27412867 cataatatatgtaaggtctgttgttcaaaccccgaccaccac 27412826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 28120685 - 28120644
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||| ||| ||| |||||||||||||||||||||||    
T  28120685 cataatatatacaaagtcagaggttcaaaccccgaccaccac 28120644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 28439600 - 28439559
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||| ||||||||||||||| |||||||| |||||||||||    
T  28439600 cataaaatatgcaaggtctgatgttcaaactccgaccaccac 28439559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 553
Target Start/End: Original strand, 29734721 - 29734758
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgacca 553  Q
    |||||||||||||||||| | |||||||||||||||||    
T  29734721 cataatatatgcaaggtccgtggttcaaaccccgacca 29734758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 31543042 - 31543083
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||| | |||||||||||| ||||||||    
T  31543042 cataatatatgcaaggtccggggttcaaaccccaaccaccac 31543083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 549
Target Start/End: Original strand, 34903547 - 34903580
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccg 549  Q
    |||||||||||||||||||||||||| |||||||    
T  34903547 cataatatatgcaaggtctgaggttcgaaccccg 34903580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 553
Target Start/End: Complemental strand, 40967402 - 40967365
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgacca 553  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  40967402 cataatatatgcaaggtttgaggttcaaacctcgacca 40967365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 42451463 - 42451504
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||||||||| ||||| |||||||||||| |||||||||||    
T  42451463 cataatatatgtaaggtttgaggttcaaactccgaccaccac 42451504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 553
Target Start/End: Complemental strand, 42475141 - 42475104
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgacca 553  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  42475141 cataaaatatgcaaggtctgaggttcgaaccccgacca 42475104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000007; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 516 - 559
Target Start/End: Original strand, 6489037 - 6489080
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    |||||||||||||||||||| ||||||||||||| |||||||||    
T  6489037 cataatatatgcaaggtctggggttcaaaccccggccaccacca 6489080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 516 - 559
Target Start/End: Original strand, 15889441 - 15889484
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    |||||||||||||||||||  |||||||||||||||||||||||    
T  15889441 cataatatatgcaaggtctagggttcaaaccccgaccaccacca 15889484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 516 - 559
Target Start/End: Original strand, 24408525 - 24408568
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    |||||||||||||||||||| |||||||||||||||||| ||||    
T  24408525 cataatatatgcaaggtctggggttcaaaccccgaccactacca 24408568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 1538839 - 1538798
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||| ||||||||||| |||||||||||    
T  1538839 cataatatatgcaaggtccgaggttcaaacgccgaccaccac 1538798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 13864374 - 13864415
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||| | |||||||||||||||||||||    
T  13864374 cataatatatgcaaggtccggggttcaaaccccgaccaccac 13864415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 516 - 556
Target Start/End: Complemental strand, 5107276 - 5107236
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccacca 556  Q
    |||||||||||||||||| ||||||| ||||||||||||||    
T  5107276 cataatatatgcaaggtccgaggttcgaaccccgaccacca 5107236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 559
Target Start/End: Complemental strand, 22522832 - 22522789
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    |||||||||||||||||| | ||||||||||||| |||||||||    
T  22522832 cataatatatgcaaggtccggggttcaaaccccggccaccacca 22522789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 518 - 557
Target Start/End: Complemental strand, 42608888 - 42608849
Alignment:
Q  518 taatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  42608888 taatatatgcaaggtctgaggttcgaactccgaccaccac 42608849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 549
Target Start/End: Original strand, 3222761 - 3222794
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccg 549  Q
    |||||||||||||||||||||||||| |||||||    
T  3222761 cataatatatgcaaggtctgaggttcgaaccccg 3222794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 13796360 - 13796401
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||||| ||| ||||| |||||||||||    
T  13796360 cataatatatgcaaggtctggggtacaaactccgaccaccac 13796401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 16579405 - 16579364
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||| | ||||||||||| |||||||||    
T  16579405 cataatatatgcaaggtccgtggttcaaaccctgaccaccac 16579364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 40446013 - 40446054
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||||||||||||||||||||||||||| | ||| ||||||    
T  40446013 cataatatatgcaaggtctgaggttcaaatctcgatcaccac 40446054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 40715980 - 40715939
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||| | ||||||||||||| |||||||    
T  40715980 cataatatatgcaaggtccggggttcaaaccccggccaccac 40715939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 14217 - 14176
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||||||||||||||| || |||||||||||||||||||||    
T  14217 cataatatatgcaaggtatgtggttcaaaccccgaccaccac 14176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 53411 - 53370
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  53411 cataaaatatgcaaggtctggggttcaaaccccgaccaccac 53370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 522 - 559
Target Start/End: Original strand, 39420 - 39457
Alignment:
Q  522 atatgcaaggtctgaggttcaaaccccgaccaccacca 559  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  39420 atatgtaaggtctggggttcaaaccccgaccaccacca 39457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Original strand, 99067 - 99108
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||||||||| ||||||||| ||||| |||||    
T  99067 cataatatatgcaaggtctggggttcaaactccgacaaccac 99108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 524 - 557
Target Start/End: Original strand, 7760 - 7793
Alignment:
Q  524 atgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||| |||||||||||||||||||||||    
T  7760 atgcaaggtccgaggttcaaaccccgaccaccac 7793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 221044 - 221003
Alignment:
Q  516 cataatatatgcaaggtctgaggttcaaaccccgaccaccac 557  Q
    |||||||||||||| ||||  |||||||||||||||||||||    
T  221044 cataatatatgcaaagtctagggttcaaaccccgaccaccac 221003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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