View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4756-Insertion-5 (Length: 131)
Name: NF4756-Insertion-5
Description: NF4756
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4756-Insertion-5 |
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| [»] chr8 (1 HSPs) |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 36; Significance: 0.00000000001; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 131
Target Start/End: Original strand, 1895908 - 1895950
Alignment:
| Q |
88 |
cctaaagtacacaacaatatgttcactagtaagttcaatcagca |
131 |
Q |
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| T |
1895908 |
cctaaagtaca-aacaatatgttcactagtaagttcaatcagca |
1895950 |
T |
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Target: chr3 (Bit Score: 33; Significance: 0.0000000007; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.0000000007
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 53391601 - 53391645
Alignment:
| Q |
87 |
gcctaaagtacacaacaatatgttcactagtaagttcaatcagca |
131 |
Q |
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||||||||||||||||||||||| ||||| |||||||||| |||| |
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| T |
53391601 |
gcctaaagtacacaacaatatgtccactaataagttcaattagca |
53391645 |
T |
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