View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4757_high_3 (Length: 424)
Name: NF4757_high_3
Description: NF4757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4757_high_3 |
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Alignment Details
Target: chr8 (Bit Score: 395; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 395; E-Value: 0
Query Start/End: Original strand, 1 - 407
Target Start/End: Original strand, 37852468 - 37852874
Alignment:
| Q |
1 |
tgaccttgatattgaagcctgcttttgcactggtttcgataaacatgattccaaactcttttgacttggcatctccttcttctatagaaacttgcctgta |
100 |
Q |
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| T |
37852468 |
tgaccttgatattgaagcctgcttttgcactggtttcgataaacatgattccaaactcttttgacttggcatctccttcttctatagaaacttgcctgta |
37852567 |
T |
|
| Q |
101 |
aacaaagtggccatgtaataaataattagacagtaacatcgcaatacttgaaacttgaaagacctttgttaatgaaattaactgaattggctattaggta |
200 |
Q |
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| T |
37852568 |
aacaaagcggccatgtaataaataattagacagtaacatcgcaatacttgaaacttgaaagacctttgttaatgaaattaactgaattggctattaggta |
37852667 |
T |
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| Q |
201 |
tgccactgcaagacacttgacctatcatagcaaaactataaagaacatggtaaattattaactatttctatgccaaaaattcgagcaactaaacaagatg |
300 |
Q |
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| T |
37852668 |
tgccactgcaagacacttgacctatcatagcaaaactataaagaacatagtaaattattaactatttctatgccaaaaattcgagcaactaaacaagatg |
37852767 |
T |
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| Q |
301 |
cattgaaacataatatgaaaactccaatatgatattaaacaaaaactaaaccatacccagtcagaaaaccgattgtgaatgaatatatagatcaaactcg |
400 |
Q |
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| T |
37852768 |
cattgaaacataatatgaaaactccaatatgatattaaacaaaaactaaaccatacccagtcagaaaaccgattgtgaatgaatatatagatcaaacgcg |
37852867 |
T |
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| Q |
401 |
gtaattc |
407 |
Q |
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| T |
37852868 |
gtaattc |
37852874 |
T |
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Target: chr3 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 39526284 - 39526378
Alignment:
| Q |
3 |
accttgatattgaagcctgcttttgcactggtttcgataaacatgattccaaactcttttgacttggcatctccttcttctatagaaacttgcct |
97 |
Q |
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||||||||||| || |||||||||||||| ||||| ||||||||||| || ||| ||||||||||||||||| |||||||| |||||||| |
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| T |
39526284 |
accttgatattaaatcctgcttttgcactagtttctataaacatgatcccgctctcacgcgacttggcatctccttcctctatagagacttgcct |
39526378 |
T |
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