View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4758-Insertion-2 (Length: 935)

Name: NF4758-Insertion-2
Description: NF4758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4758-Insertion-2
NF4758-Insertion-2
[»] chr7 (61 HSPs)
chr7 (421-926)||(23859054-23859551)
chr7 (84-424)||(23859614-23859954)
chr7 (728-926)||(27237348-27237544)
chr7 (728-932)||(7398424-7398632)
chr7 (728-926)||(12419419-12419616)
chr7 (756-932)||(9021754-9021928)
chr7 (728-895)||(23744808-23744974)
chr7 (728-903)||(38971257-38971430)
chr7 (728-890)||(21763513-21763672)
chr7 (724-912)||(2611181-2611369)
chr7 (728-903)||(23020409-23020581)
chr7 (737-903)||(8171472-8171637)
chr7 (737-903)||(29077224-29077389)
chr7 (758-925)||(36891560-36891728)
chr7 (736-860)||(9014111-9014233)
chr7 (722-903)||(8239691-8239871)
chr7 (832-932)||(20153176-20153276)
chr7 (737-901)||(18776698-18776862)
chr7 (724-903)||(23550990-23551169)
chr7 (8-145)||(24339637-24339774)
chr7 (724-928)||(6765604-6765804)
chr7 (724-823)||(5955515-5955614)
chr7 (728-918)||(12981315-12981502)
chr7 (737-926)||(9014702-9014883)
chr7 (732-903)||(20091207-20091379)
chr7 (832-903)||(48983871-48983942)
chr7 (724-903)||(38414795-38414974)
chr7 (724-788)||(26917651-26917715)
chr7 (737-883)||(26254017-26254163)
chr7 (728-901)||(10329333-10329506)
chr7 (33-77)||(16341516-16341560)
chr7 (728-926)||(18201118-18201313)
chr7 (724-903)||(24525601-24525783)
chr7 (775-903)||(36902898-36903022)
chr7 (31-134)||(2334268-2334370)
chr7 (832-902)||(28749715-28749784)
chr7 (33-78)||(22602704-22602749)
chr7 (33-77)||(7328686-7328730)
chr7 (33-77)||(15902842-15902886)
chr7 (28-72)||(18213033-18213077)
chr7 (794-903)||(47984959-47985068)
chr7 (832-903)||(10955488-10955559)
chr7 (833-903)||(12596315-12596385)
chr7 (31-72)||(15680827-15680868)
chr7 (33-77)||(1433474-1433518)
chr7 (28-71)||(640128-640171)
chr7 (33-72)||(3721113-3721152)
chr7 (31-134)||(26033399-26033502)
chr7 (33-76)||(27229307-27229350)
chr7 (31-73)||(9408333-9408375)
chr7 (849-903)||(17800265-17800319)
chr7 (31-77)||(18039017-18039063)
chr7 (8-98)||(32308115-32308205)
chr7 (32-70)||(41020515-41020553)
chr7 (28-69)||(2948698-2948739)
chr7 (8-77)||(13770686-13770755)
chr7 (31-76)||(18013070-18013115)
chr7 (8-57)||(25481897-25481946)
chr7 (33-98)||(26329356-26329421)
chr7 (33-70)||(27093415-27093452)
chr7 (33-70)||(27184849-27184886)
[»] chr8 (60 HSPs)
chr8 (729-926)||(41677098-41677296)
chr8 (725-926)||(34048630-34048829)
chr8 (726-926)||(15167336-15167538)
chr8 (726-915)||(15078750-15078938)
chr8 (728-926)||(7944447-7944644)
chr8 (730-886)||(30674330-30674485)
chr8 (755-898)||(8646215-8646356)
chr8 (728-928)||(39332333-39332529)
chr8 (737-901)||(34789796-34789959)
chr8 (743-929)||(5973047-5973232)
chr8 (728-916)||(11290175-11290367)
chr8 (758-918)||(25561448-25561607)
chr8 (732-903)||(23606558-23606728)
chr8 (832-926)||(5942677-5942771)
chr8 (737-903)||(45475821-45475986)
chr8 (738-903)||(13534622-13534785)
chr8 (738-903)||(13624162-13624325)
chr8 (727-916)||(14509904-14510094)
chr8 (744-903)||(30883333-30883493)
chr8 (33-144)||(26902103-26902214)
chr8 (725-807)||(5942766-5942848)
chr8 (737-903)||(2952152-2952320)
chr8 (737-903)||(10917395-10917560)
chr8 (8-152)||(22651971-22652115)
chr8 (8-139)||(15816062-15816193)
chr8 (832-926)||(5721540-5721634)
chr8 (732-903)||(23798189-23798360)
chr8 (832-926)||(23941119-23941213)
chr8 (735-824)||(34868108-34868198)
chr8 (745-901)||(41879187-41879341)
chr8 (732-903)||(42600786-42600957)
chr8 (753-913)||(8102906-8103067)
chr8 (728-824)||(38009076-38009173)
chr8 (33-139)||(34450965-34451076)
chr8 (28-131)||(18964192-18964297)
chr8 (737-903)||(3048450-3048616)
chr8 (728-781)||(38843420-38843473)
chr8 (31-98)||(2572030-2572097)
chr8 (737-901)||(5860675-5860841)
chr8 (8-139)||(29510237-29510368)
chr8 (737-903)||(37430091-37430257)
chr8 (33-144)||(11927014-11927125)
chr8 (728-823)||(34812682-34812783)
chr8 (8-74)||(39954277-39954343)
chr8 (36-145)||(29447467-29447576)
chr8 (8-72)||(13844596-13844660)
chr8 (35-98)||(24362175-24362239)
chr8 (725-789)||(29364468-29364532)
chr8 (33-72)||(4786338-4786377)
chr8 (33-80)||(11944685-11944732)
chr8 (33-88)||(25172682-25172737)
chr8 (33-72)||(33405384-33405423)
chr8 (31-73)||(8342990-8343032)
chr8 (34-72)||(8847277-8847315)
chr8 (33-63)||(14731732-14731762)
chr8 (13-75)||(25566841-25566903)
chr8 (33-139)||(29447043-29447149)
chr8 (82-139)||(3025609-3025666)
chr8 (31-72)||(20873087-20873128)
chr8 (11-72)||(24613519-24613579)
[»] chr4 (71 HSPs)
chr4 (728-926)||(36118383-36118579)
chr4 (729-926)||(39329317-39329513)
chr4 (733-926)||(52468272-52468463)
chr4 (728-920)||(27112022-27112212)
chr4 (728-918)||(10041923-10042113)
chr4 (728-916)||(37744827-37745021)
chr4 (744-926)||(24396920-24397102)
chr4 (728-823)||(5893099-5893195)
chr4 (737-903)||(43455464-43455629)
chr4 (733-919)||(36362798-36362984)
chr4 (728-900)||(36178684-36178852)
chr4 (724-885)||(39655173-39655334)
chr4 (730-926)||(40217217-40217411)
chr4 (737-903)||(47128996-47129161)
chr4 (728-926)||(51691844-51692038)
chr4 (724-824)||(30507039-30507142)
chr4 (732-898)||(32128598-32128764)
chr4 (737-903)||(2790674-2790839)
chr4 (738-903)||(54083176-54083340)
chr4 (732-903)||(16845030-16845200)
chr4 (732-903)||(34027588-34027758)
chr4 (832-916)||(4167918-4168002)
chr4 (737-903)||(54780786-54780953)
chr4 (718-926)||(15735081-15735282)
chr4 (737-903)||(38209523-38209689)
chr4 (778-903)||(10978909-10979036)
chr4 (737-903)||(35465116-35465280)
chr4 (832-908)||(35779352-35779428)
chr4 (776-912)||(2135294-2135428)
chr4 (832-926)||(45656161-45656255)
chr4 (34-132)||(46083931-46084029)
chr4 (738-903)||(37777156-37777321)
chr4 (744-901)||(1105543-1105699)
chr4 (28-139)||(5414105-5414216)
chr4 (832-903)||(13460216-13460287)
chr4 (778-903)||(34768548-34768672)
chr4 (779-901)||(48209251-48209374)
chr4 (728-797)||(4167846-4167915)
chr4 (728-797)||(11906826-11906895)
chr4 (737-872)||(17679440-17679574)
chr4 (8-98)||(22234864-22234955)
chr4 (778-872)||(51964748-51964844)
chr4 (728-824)||(24614040-24614137)
chr4 (832-903)||(40089525-40089596)
chr4 (33-95)||(13134470-13134532)
chr4 (737-862)||(16922260-16922386)
chr4 (33-139)||(30982811-30982917)
chr4 (778-903)||(19498513-19498635)
chr4 (832-900)||(37514671-37514739)
chr4 (832-903)||(5128869-5128940)
chr4 (31-94)||(19500836-19500899)
chr4 (737-903)||(32915394-32915560)
chr4 (33-77)||(5775353-5775397)
chr4 (732-894)||(16882323-16882484)
chr4 (72-132)||(49431074-49431134)
chr4 (33-72)||(10499270-10499309)
chr4 (31-98)||(19312353-19312420)
chr4 (26-80)||(32915597-32915652)
chr4 (32-71)||(35157986-35158025)
chr4 (31-77)||(11931298-11931344)
chr4 (36-74)||(13783304-13783342)
chr4 (26-72)||(36409512-36409558)
chr4 (26-72)||(36423678-36423724)
chr4 (732-822)||(38352193-38352283)
chr4 (724-822)||(40089614-40089712)
chr4 (11-72)||(2361975-2362036)
chr4 (26-71)||(5555133-5555178)
chr4 (31-72)||(12895274-12895315)
chr4 (41-134)||(30838238-30838331)
chr4 (31-72)||(40179636-40179677)
chr4 (31-72)||(54580023-54580064)
[»] chr2 (63 HSPs)
chr2 (724-926)||(21665622-21665822)
chr2 (725-916)||(16096998-16097188)
chr2 (738-926)||(11912691-11912879)
chr2 (724-926)||(24035466-24035667)
chr2 (753-919)||(38400785-38400950)
chr2 (728-926)||(28425632-28425832)
chr2 (744-920)||(12133977-12134156)
chr2 (728-926)||(13800469-13800667)
chr2 (728-926)||(16227291-16227490)
chr2 (730-824)||(22727384-22727478)
chr2 (729-925)||(7742055-7742255)
chr2 (764-903)||(29939823-29939961)
chr2 (28-145)||(34784909-34785026)
chr2 (778-903)||(9046032-9046157)
chr2 (725-812)||(37182738-37182824)
chr2 (837-926)||(37182650-37182739)
chr2 (728-824)||(11952514-11952609)
chr2 (8-139)||(36096308-36096439)
chr2 (734-824)||(44914835-44914924)
chr2 (762-903)||(26716131-26716273)
chr2 (737-903)||(4505897-4506063)
chr2 (737-903)||(6965010-6965174)
chr2 (41-139)||(35056896-35056994)
chr2 (737-903)||(3155220-3155386)
chr2 (842-926)||(11952644-11952728)
chr2 (832-900)||(22727530-22727598)
chr2 (31-139)||(37419761-37419869)
chr2 (832-903)||(24410440-24410511)
chr2 (725-824)||(42029226-42029329)
chr2 (724-903)||(3953009-3953186)
chr2 (732-903)||(10762495-10762664)
chr2 (737-872)||(34694009-34694143)
chr2 (737-872)||(34716421-34716555)
chr2 (737-872)||(40636172-40636306)
chr2 (734-926)||(10252388-10252587)
chr2 (729-789)||(12694795-12694855)
chr2 (832-903)||(12337476-12337547)
chr2 (728-901)||(8907002-8907176)
chr2 (8-146)||(26769506-26769644)
chr2 (72-144)||(24009343-24009415)
chr2 (31-139)||(30717463-30717571)
chr2 (737-822)||(1396632-1396718)
chr2 (34-104)||(28524447-28524517)
chr2 (34-131)||(41843462-41843553)
chr2 (31-144)||(11223792-11223904)
chr2 (732-903)||(27506669-27506839)
chr2 (33-146)||(32749751-32749864)
chr2 (724-789)||(37622276-37622341)
chr2 (762-822)||(8327701-8327761)
chr2 (32-132)||(15657883-15657983)
chr2 (28-72)||(20242727-20242771)
chr2 (28-72)||(20922928-20922972)
chr2 (33-77)||(30527590-30527634)
chr2 (28-63)||(2665897-2665932)
chr2 (832-903)||(7162787-7162858)
chr2 (7-62)||(28677903-28677958)
chr2 (845-888)||(29694397-29694440)
chr2 (31-97)||(4207875-4207940)
chr2 (34-72)||(5367213-5367251)
chr2 (31-77)||(12668418-12668464)
chr2 (12-74)||(20539672-20539734)
chr2 (33-104)||(22084798-22084871)
chr2 (33-75)||(44860340-44860382)
[»] chr1 (76 HSPs)
chr1 (728-918)||(10925878-10926067)
chr1 (728-926)||(39134644-39134844)
chr1 (728-926)||(38546960-38547157)
chr1 (728-926)||(45758486-45758685)
chr1 (728-926)||(5533304-5533501)
chr1 (728-928)||(6221668-6221865)
chr1 (724-926)||(26803940-26804135)
chr1 (726-926)||(43235690-43235891)
chr1 (737-903)||(5316695-5316860)
chr1 (737-903)||(44655756-44655921)
chr1 (732-903)||(17168971-17169141)
chr1 (737-903)||(14146315-14146480)
chr1 (778-903)||(23185442-23185566)
chr1 (838-926)||(33170751-33170839)
chr1 (8-139)||(25934611-25934742)
chr1 (31-145)||(5944301-5944415)
chr1 (737-903)||(16140070-16140235)
chr1 (31-139)||(47989515-47989623)
chr1 (762-903)||(4971576-4971716)
chr1 (832-903)||(27559652-27559723)
chr1 (762-903)||(41697095-41697235)
chr1 (724-901)||(38853539-38853717)
chr1 (734-903)||(50146311-50146479)
chr1 (733-903)||(1366808-1366976)
chr1 (737-903)||(50881445-50881609)
chr1 (738-903)||(51607374-51607538)
chr1 (737-903)||(5027564-5027731)
chr1 (732-900)||(40501717-40501885)
chr1 (732-903)||(9172950-9173121)
chr1 (732-903)||(9180932-9181103)
chr1 (33-139)||(9828064-9828170)
chr1 (743-893)||(35392295-35392442)
chr1 (8-131)||(1486656-1486773)
chr1 (33-93)||(44482250-44482310)
chr1 (832-903)||(6771806-6771877)
chr1 (33-139)||(6414935-6415040)
chr1 (732-903)||(19955732-19955902)
chr1 (832-897)||(21740964-21741029)
chr1 (33-98)||(34371733-34371798)
chr1 (7-72)||(39953146-39953211)
chr1 (762-868)||(6889661-6889765)
chr1 (762-868)||(6891507-6891611)
chr1 (31-139)||(32461397-32461504)
chr1 (10-134)||(34315709-34315833)
chr1 (8-139)||(40917746-40917875)
chr1 (33-88)||(25361906-25361961)
chr1 (33-75)||(25272502-25272544)
chr1 (8-77)||(113294-113363)
chr1 (737-903)||(3406433-3406599)
chr1 (737-903)||(3440221-3440387)
chr1 (8-88)||(5376484-5376564)
chr1 (31-88)||(6612155-6612212)
chr1 (33-98)||(9629874-9629939)
chr1 (8-57)||(14359537-14359585)
chr1 (8-72)||(22515887-22515951)
chr1 (8-72)||(22881616-22881680)
chr1 (28-72)||(30749855-30749899)
chr1 (28-72)||(30771306-30771350)
chr1 (33-77)||(34712378-34712422)
chr1 (8-72)||(46348383-46348447)
chr1 (33-76)||(7918207-7918250)
chr1 (31-70)||(13997901-13997940)
chr1 (33-72)||(14332642-14332681)
chr1 (787-822)||(17322606-17322641)
chr1 (33-76)||(20157346-20157389)
chr1 (728-787)||(24988406-24988465)
chr1 (56-131)||(41597422-41597497)
chr1 (26-88)||(15449216-15449278)
chr1 (31-93)||(31694689-31694751)
chr1 (31-77)||(35919271-35919317)
chr1 (33-70)||(1864882-1864919)
chr1 (31-72)||(7353493-7353534)
chr1 (82-139)||(10577679-10577736)
chr1 (33-62)||(12713337-12713366)
chr1 (33-62)||(12717428-12717457)
chr1 (31-76)||(24577182-24577227)
[»] chr5 (73 HSPs)
chr5 (728-906)||(26718871-26719048)
chr5 (728-906)||(26988615-26988792)
chr5 (724-926)||(11242237-11242437)
chr5 (765-926)||(2024600-2024761)
chr5 (754-932)||(1366474-1366653)
chr5 (731-919)||(2530823-2531009)
chr5 (733-926)||(34425884-34426076)
chr5 (724-920)||(2412075-2412266)
chr5 (794-926)||(14318373-14318504)
chr5 (729-930)||(40794249-40794450)
chr5 (728-926)||(24395720-24395916)
chr5 (794-932)||(36868864-36869003)
chr5 (732-901)||(38869289-38869457)
chr5 (724-903)||(10407465-10407643)
chr5 (758-926)||(10543655-10543820)
chr5 (730-926)||(33037761-33037958)
chr5 (728-824)||(35080694-35080788)
chr5 (778-903)||(23284034-23284158)
chr5 (732-903)||(16198719-16198890)
chr5 (724-926)||(22648656-22648855)
chr5 (737-903)||(34756296-34756462)
chr5 (737-903)||(16592005-16592170)
chr5 (8-139)||(6401493-6401624)
chr5 (734-915)||(15639635-15639817)
chr5 (738-902)||(31194544-31194706)
chr5 (737-901)||(36187810-36187973)
chr5 (28-139)||(21814276-21814387)
chr5 (737-903)||(27079015-27079182)
chr5 (8-130)||(19579696-19579818)
chr5 (737-901)||(22986488-22986652)
chr5 (738-903)||(30854333-30854498)
chr5 (832-903)||(9364295-9364366)
chr5 (28-139)||(19452999-19453110)
chr5 (8-139)||(39698536-39698667)
chr5 (33-139)||(3966523-3966629)
chr5 (33-99)||(18592093-18592159)
chr5 (8-98)||(21522745-21522835)
chr5 (8-98)||(21533311-21533401)
chr5 (737-903)||(15480021-15480185)
chr5 (728-928)||(17344935-17345135)
chr5 (832-900)||(28822367-28822435)
chr5 (832-928)||(41911642-41911738)
chr5 (33-139)||(14873537-14873637)
chr5 (832-903)||(19523203-19523274)
chr5 (33-104)||(41091225-41091296)
chr5 (774-824)||(606236-606288)
chr5 (737-903)||(2274894-2275060)
chr5 (728-789)||(27530611-27530672)
chr5 (738-902)||(31881364-31881528)
chr5 (733-785)||(22875060-22875112)
chr5 (832-903)||(16799352-16799423)
chr5 (72-139)||(21576689-21576756)
chr5 (832-903)||(27924086-27924157)
chr5 (832-903)||(40389561-40389632)
chr5 (832-902)||(7670929-7670999)
chr5 (40-98)||(11685966-11686023)
chr5 (33-75)||(36838563-36838605)
chr5 (8-57)||(14674264-14674313)
chr5 (26-98)||(21542042-21542115)
chr5 (11-127)||(7677703-7677819)
chr5 (91-139)||(17593667-17593715)
chr5 (8-72)||(33178020-33178084)
chr5 (32-88)||(37328828-37328884)
chr5 (8-72)||(42029747-42029811)
chr5 (32-72)||(43564900-43564940)
chr5 (832-883)||(7338023-7338074)
chr5 (33-72)||(16203795-16203834)
chr5 (24-59)||(25978983-25979018)
chr5 (8-134)||(31084318-31084438)
chr5 (8-143)||(36642692-36642826)
chr5 (33-75)||(6471886-6471928)
chr5 (10-72)||(21191056-21191118)
chr5 (34-63)||(27144484-27144513)
[»] scaffold1320 (1 HSPs)
scaffold1320 (726-915)||(1346-1534)
[»] scaffold0097 (1 HSPs)
scaffold0097 (726-918)||(38914-39108)
[»] scaffold1590 (1 HSPs)
scaffold1590 (744-926)||(199-380)
[»] chr3 (65 HSPs)
chr3 (727-926)||(26279524-26279723)
chr3 (742-928)||(52374638-52374824)
chr3 (737-903)||(8073272-8073437)
chr3 (728-926)||(54574748-54574949)
chr3 (728-868)||(23641242-23641382)
chr3 (729-926)||(28689287-28689483)
chr3 (738-902)||(36605973-36606136)
chr3 (728-901)||(49393099-49393269)
chr3 (729-926)||(25855406-25855601)
chr3 (761-916)||(8420320-8420476)
chr3 (732-903)||(43207167-43207336)
chr3 (8-139)||(4987224-4987355)
chr3 (737-903)||(18372486-18372655)
chr3 (737-903)||(34290569-34290735)
chr3 (737-903)||(47467691-47467857)
chr3 (753-903)||(3953846-3953995)
chr3 (728-925)||(32319082-32319276)
chr3 (737-903)||(21582778-21582945)
chr3 (737-902)||(36715957-36716123)
chr3 (732-903)||(37168374-37168545)
chr3 (737-903)||(38681026-38681192)
chr3 (732-903)||(44708484-44708654)
chr3 (737-903)||(54619136-54619302)
chr3 (31-130)||(25064927-25065024)
chr3 (8-139)||(34185056-34185187)
chr3 (8-97)||(14209108-14209197)
chr3 (737-901)||(27078501-27078666)
chr3 (737-901)||(27084298-27084463)
chr3 (837-926)||(29598091-29598179)
chr3 (762-903)||(53149272-53149413)
chr3 (762-903)||(9878646-9878786)
chr3 (72-139)||(35222986-35223053)
chr3 (725-870)||(42453444-42453590)
chr3 (33-99)||(11665964-11666030)
chr3 (728-871)||(50258548-50258690)
chr3 (832-901)||(53506912-53506981)
chr3 (31-75)||(15314873-15314917)
chr3 (832-903)||(42098808-42098879)
chr3 (732-898)||(54407083-54407252)
chr3 (10-76)||(27505243-27505309)
chr3 (732-818)||(48720439-48720525)
chr3 (728-786)||(52973437-52973495)
chr3 (31-72)||(7928468-7928509)
chr3 (31-72)||(40993335-40993376)
chr3 (31-152)||(41961570-41961691)
chr3 (732-903)||(50939162-50939332)
chr3 (13-73)||(1509539-1509599)
chr3 (33-77)||(11313795-11313839)
chr3 (8-104)||(15796262-15796358)
chr3 (738-782)||(29598175-29598219)
chr3 (28-72)||(38731233-38731277)
chr3 (10-98)||(55212960-55213047)
chr3 (8-72)||(55401070-55401134)
chr3 (837-916)||(789930-790009)
chr3 (41-128)||(8039779-8039866)
chr3 (72-139)||(13845469-13845536)
chr3 (33-72)||(49505154-49505193)
chr3 (31-145)||(16789030-16789143)
chr3 (31-77)||(25948882-25948928)
chr3 (33-75)||(28678323-28678365)
chr3 (8-74)||(28917996-28918062)
chr3 (33-63)||(32804549-32804579)
chr3 (8-57)||(10268501-10268550)
chr3 (33-126)||(10690209-10690301)
chr3 (8-77)||(14829685-14829753)
[»] chr6 (52 HSPs)
chr6 (728-920)||(2477510-2477700)
chr6 (724-926)||(20611774-20611973)
chr6 (732-900)||(17353964-17354132)
chr6 (737-903)||(33774124-33774291)
chr6 (737-903)||(21479501-21479668)
chr6 (737-903)||(13727332-13727498)
chr6 (737-903)||(20711653-20711819)
chr6 (732-903)||(27788618-27788787)
chr6 (8-139)||(16766692-16766823)
chr6 (28-139)||(18367851-18367962)
chr6 (832-932)||(21183703-21183805)
chr6 (778-918)||(6159430-6159568)
chr6 (738-869)||(27314113-27314244)
chr6 (737-903)||(21280552-21280718)
chr6 (731-903)||(28075790-28075965)
chr6 (28-139)||(16488523-16488634)
chr6 (728-889)||(30121783-30121941)
chr6 (33-139)||(17327594-17327694)
chr6 (778-903)||(34397864-34397988)
chr6 (8-146)||(9107296-9107434)
chr6 (778-903)||(19737667-19737791)
chr6 (835-926)||(4036932-4037023)
chr6 (8-139)||(8365452-8365583)
chr6 (832-902)||(1155877-1155947)
chr6 (8-77)||(26562684-26562753)
chr6 (724-793)||(27131120-27131189)
chr6 (8-72)||(17841589-17841653)
chr6 (33-76)||(7086815-7086858)
chr6 (8-71)||(7938111-7938174)
chr6 (33-76)||(9025490-9025533)
chr6 (33-139)||(10339058-10339165)
chr6 (832-903)||(24711027-24711098)
chr6 (728-815)||(27994850-27994936)
chr6 (33-75)||(9195751-9195793)
chr6 (31-72)||(7027260-7027301)
chr6 (8-77)||(8931597-8931666)
chr6 (33-132)||(9629403-9629502)
chr6 (8-131)||(12696319-12696436)
chr6 (31-139)||(31384938-31385045)
chr6 (8-72)||(33001289-33001353)
chr6 (8-75)||(3398614-3398680)
chr6 (33-72)||(5732510-5732549)
chr6 (31-74)||(7151430-7151473)
chr6 (33-72)||(7265593-7265632)
chr6 (8-63)||(10842527-10842582)
chr6 (742-823)||(4037524-4037604)
chr6 (34-139)||(7248379-7248484)
chr6 (11-72)||(7377977-7378038)
chr6 (35-76)||(9027200-9027241)
chr6 (31-76)||(10770670-10770715)
chr6 (33-70)||(26178683-26178720)
chr6 (72-145)||(34595182-34595255)
[»] scaffold0012 (1 HSPs)
scaffold0012 (753-912)||(206439-206597)
[»] scaffold0007 (1 HSPs)
scaffold0007 (728-926)||(230786-230981)
[»] scaffold0039 (2 HSPs)
scaffold0039 (732-903)||(106542-106713)
scaffold0039 (8-98)||(84947-85037)
[»] scaffold0070 (1 HSPs)
scaffold0070 (737-903)||(1347-1512)
[»] scaffold0182 (1 HSPs)
scaffold0182 (728-932)||(23925-24122)
[»] scaffold0022 (2 HSPs)
scaffold0022 (724-926)||(40066-40270)
scaffold0022 (724-926)||(138126-138330)
[»] scaffold0003 (2 HSPs)
scaffold0003 (8-145)||(241589-241726)
scaffold0003 (728-915)||(351260-351445)
[»] scaffold0902 (1 HSPs)
scaffold0902 (744-824)||(4404-4484)
[»] scaffold0018 (1 HSPs)
scaffold0018 (832-920)||(173538-173626)
[»] scaffold0623 (1 HSPs)
scaffold0623 (28-134)||(5934-6040)
[»] scaffold0227 (2 HSPs)
scaffold0227 (839-928)||(16006-16095)
scaffold0227 (743-824)||(16147-16228)
[»] scaffold0036 (1 HSPs)
scaffold0036 (33-139)||(9680-9786)
[»] scaffold0123 (1 HSPs)
scaffold0123 (33-98)||(44499-44564)
[»] scaffold0044 (1 HSPs)
scaffold0044 (33-134)||(53200-53301)
[»] scaffold0236 (1 HSPs)
scaffold0236 (33-75)||(25765-25807)
[»] scaffold0171 (2 HSPs)
scaffold0171 (31-77)||(23438-23484)
scaffold0171 (31-88)||(23529-23586)
[»] scaffold0223 (1 HSPs)
scaffold0223 (8-77)||(20167-20236)
[»] scaffold0136 (1 HSPs)
scaffold0136 (31-132)||(3789-3890)
[»] scaffold0019 (1 HSPs)
scaffold0019 (31-131)||(71743-71843)
[»] scaffold0086 (1 HSPs)
scaffold0086 (31-134)||(2946-3049)
[»] scaffold0020 (1 HSPs)
scaffold0020 (33-76)||(135308-135351)
[»] scaffold0057 (1 HSPs)
scaffold0057 (11-97)||(24023-24108)
[»] scaffold0103 (1 HSPs)
scaffold0103 (8-57)||(51806-51855)


Alignment Details
Target: chr7 (Bit Score: 342; Significance: 0; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 342; E-Value: 0
Query Start/End: Original strand, 421 - 926
Target Start/End: Complemental strand, 23859551 - 23859054
Alignment:
Q  421 agaatagggaggacacctaagcttttgtcacatgtctaacacgtgggcgaggtgtgactgttagtgtataattcacatttaagtatatttatttgtaact 520  Q
    ||||||||||||||| ||||||||||||||||||||||||||       |||| |||||||| |||||||||||| ||||||||||||||||||||||||    
T  23859551 agaatagggaggacagctaagcttttgtcacatgtctaacac-------aggtatgactgttggtgtataattcagatttaagtatatttatttgtaact 23859459  T
Q  521 aaatagagttagttcggttgttatttggtagttgttaaagtagttagagaagttatagttcataactataactagagttagctattactagttagttaac 620  Q
    | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  23859458 acatagagttagttaggttgttatttggtagttgttaaagtagttagagaagttatagttaataactataactagagttagctattacaagttagttaac 23859359  T
Q  621 tacatattcaagtgtatagttagtcttttaaacaggagctctataaagtttaaatatgataacatatcttatgtatcacacacaagttgaatccatttca 720  Q
    |||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||    
T  23859358 tacagattcaagtgtatagttagtcttttaaataggaactctataaagtttaaatatgataacacatctcatgtatcacacacaagttgactccatttca 23859259  T
Q  721 acggggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatt 820  Q
    || ||  |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||| |||| |||||||||||    
T  23859258 acaggtccgttcctacgaatttggaggctcgactctgtaagtgaaaagagacctgtaataaaataaaaacgtattttgtttaagagaataatgttctatt 23859159  T
Q  821 taaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcc 920  Q
    ||||       ||||||||||||||||||  ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||    
T  23859158 taaa-ttttttaaaagataaatacaatgtaccgtatatatgcgatacacccaaagatgaaaattactaccgtatacatgaggatcctcaaaccaccctcc 23859060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 84 - 424
Target Start/End: Complemental strand, 23859954 - 23859614
Alignment:
Q  84 gacaccacacgtgtctaacacggtgacacgctttatccgaggagtgtccgtacttcgtagatgtaaagttaaaatatatgcacattgattccctttgcac 183  Q
    ||||| ||||||||||||||  ||||||  | ||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  23859954 gacacgacacgtgtctaacaaagtgacataccttatctgaggagtgtccgtgcttcatagatgtaaagttaaaatatatgcacattgattccctttgcac 23859855  T
Q  184 aaagtatcaagaatcttgacattctaatccttgagaagcatatctttgatgtcatgaacgatattagcatacctatattatatttcgaaaattacgtatg 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  23859854 aaagtatcaagaatcttgacattctaatccttgagaagcatatctttgatgtcatgaaagatattagcatacctatattatatttcgaaaattacgtatg 23859755  T
Q  284 cagtactcaagcttgaatactttactcacacattatctgaagtgttaaaattcaaaatcatttttccaattccagtcttttcatgaattgaaaacgcaaa 383  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23859754 cagtactcaagcttgaatactttactcacacattatgtgaagtgttaaaattcaaaatcatttttccaattccagtcttttcatgaattgaaaacgcaaa 23859655  T
Q  384 aaaggaccagaagattgtaggatcttaatgacacctgagaa 424  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  23859654 aaaggaccagaagattgtaggatcttaatgacacatgagaa 23859614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 728 - 926
Target Start/End: Original strand, 27237348 - 27237544
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 827  Q
    |||||||  ||||||||||||||| |||| ||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||       
T  27237348 cgttcctgtgaatttggaggctcgtctctataagtgaaaagagatccgtaataaaataacaa-gtattttttttaaaagaacaatgttctatttaaa-tt 27237445  T
Q  828 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaa 926  Q
        ||||||||||||||| |||| ||||||||| |||  | | |||  |||||||||||| |||||||||||||| ||| |||||||||||| |||||    
T  27237446 ttttaaaagataaatacaaggtgttgtatatatgtgatgaatctaaaggtgaaaatcactatcgtatacatgaggaacctcaaaccaccctcccaaaaa 27237544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 728 - 932
Target Start/End: Complemental strand, 7398632 - 7398424
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaat-aaaataaaaacgtattttatt--taaaagaacaatgttctatttaaa 824  Q
    ||||||||||||  || ||||||||||||||||||||||||||| ||||||| ||||||||||| |||||| ||  ||||||||||||||||||||||||    
T  7398632 cgttcctacgaagctgtaggctcgactctgtaagtgaaaagagacccgtaataaaaataaaaacatattttttttataaaagaacaatgttctatttaaa 7398533  T
Q  825 nnnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcc--aa 922  Q
            |||||||||||||| ||| | |||||||| |||||||| |||  |||||||||||||| |||||||||||| ||| ||||||||||||  ||    
T  7398532 ttttttg-aaagataaatacaaggtgccatatatatgtgatacacctaaaggtgaaaatcactaccatatacatgaggaacctcaaaccaccctcccaaa 7398434  T
Q  923 aaaacatcca 932  Q
    ||||||||||    
T  7398433 aaaacatcca 7398424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 728 - 926
Target Start/End: Original strand, 12419419 - 12419616
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 827  Q
    |||||||| ||||  ||||||||| || |||||||||||||||  |||||||||||||| |||||||||| ||||||||||||||||||||||||||       
T  12419419 cgttcctatgaatccggaggctcggctttgtaagtgaaaagaggcccgtaataaaataacaacgtattttttttaaaagaacaatgttctatttaaa-tt 12419517  T
Q  828 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaa 926  Q
        ||||||||||||||||||  | ||||| || |||||| ||||| |||||||||||||  | ||||||||||| ||| |||||||||||| |||||    
T  12419518 ttttaaaagataaatacaatgtaccttatatgtgtgatacatccaaagatgaaaatcactattgaatacatgaggaacctcaaaccaccctcccaaaaa 12419616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 756 - 932
Target Start/End: Original strand, 9021754 - 9021928
Alignment:
Q  756 tgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgta 855  Q
    ||||||||||||||||  ||||||||||||||| |||||||| ||  |||||||||| | |||||||||       ||||||||||||||||||| ||||    
T  9021754 tgtaagtgaaaagagacacgtaataaaataaaagcgtattttttt--aaagaacaatttgctatttaaatttttt-aaaagataaatacaatgtgccgta 9021850  T
Q  856 tatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcc--aaaaaacatcca 932  Q
    |||||||| ||||||||||  ||||||||||||||||||||||||||| ||| ||||||||||||  ||||||||||||    
T  9021851 tatatgcggtacacccaaaggtgaaaatcactaccgtatacatgagga-cctcaaaccaccctcccaaaaaaacatcca 9021928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 728 - 895
Target Start/End: Complemental strand, 23744974 - 23744808
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 827  Q
    |||||||||||||||||||||||  |||| |||||||||||||  |||||| |||||||||| ||||||| || ||||||||||||||||| |||||       
T  23744974 cgttcctacgaatttggaggctcagctctataagtgaaaagaggcccgtaaaaaaataaaaatgtatttttttaaaaagaacaatgttctaattaaa-tt 23744876  T
Q  828 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtata 895  Q
        ||||||||||||||| ||| || ||||||||| |||||| ||| || |||||||||||||||||    
T  23744875 ttttaaaagataaatacaaggtgccgcatatatgcggtacacctaaagataaaaatcactaccgtata 23744808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 728 - 903
Target Start/End: Complemental strand, 38971430 - 38971257
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 827  Q
    |||| |||||||| | ||| |||| || |||||||||||||||| ||||||||||||||||| ||||||| ||||||||| |||| || ||||||||       
T  38971430 cgtttctacgaatctagagactcggctttgtaagtgaaaagagacccgtaataaaataaaaatgtattttttttaaaagatcaatattttatttaaa--t 38971333  T
Q  828 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
        ||||||||||||||| ||||||||||||||  ||||||| |||| ||||||||||||||||| ||| |||||    
T  38971332 ttttaaaagataaatacaaggtgtcgtatatatgttatacacctaaatgtgaaaatcactaccgtaaacacgagga 38971257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 728 - 890
Target Start/End: Original strand, 21763513 - 21763672
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 827  Q
    ||||||||| ||| |||||||||   ||| ||||| |||||||||||||||||||||||||||||||||  ||| |||||||| |||||||||||||       
T  21763513 cgttcctacaaatctggaggctctgttctataagtaaaaagagatccgtaataaaataaaaacgtattt--ttttaaagaacattgttctatttaaa-tt 21763609  T
Q  828 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactacc 890  Q
        ||||||||||||||| || |||||||||||||||||||| |||  ||||||||||||||    
T  21763610 ttttaaaagataaatacaaagtatcgtatatatgcgatacaccaaaaagtgaaaatcactacc 21763672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 724 - 912
Target Start/End: Original strand, 2611181 - 2611369
Alignment:
Q  724 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctattta 822  Q
    |||||||||||| ||||  |||||||||  |||| ||||||||||||    ||||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  2611181 gggtcgttcctatgaatccggaggctcggttctgcaagtgaaaagaggcttgtaataaaataaaaaagtatttttttttaaaagaacaatgttctattta 2611280  T
Q  823 aannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaac 912  Q
    ||       ||||||||||||||| |||||||||||||||| ||||| |||   |||||||||| || ||||||||||||| ||| ||||    
T  2611281 aa-ttttttaaaagataaatacaaggtgtcgtatatatgcggtacacacaatggtgaaaatcacaactgtatacatgaggaacctcaaac 2611369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 728 - 903
Target Start/End: Original strand, 23020409 - 23020581
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 827  Q
    ||||||||||||| ||||||| ||  ||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||| |||  ||||| |       
T  23020409 cgttcctacgaatctggaggc-cggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtattttttttaaaagaacaacgtttcatttaga-tt 23020506  T
Q  828 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
        |||||||||||| || |||| |||||||||| | |||| ||||  |||||||||||||||||||||||||||    
T  23020507 ttttaaaagataaatataaggtgttgtatatatgc-acacactcaaaggtgaaaatcactaccgtatacatgagga 23020581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 737 - 903
Target Start/End: Original strand, 8171472 - 8171637
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 836  Q
    ||||| ||||||||| |||||  | ||||||||| || || ||||||| ||| |||||||| ||||||||| |||||||||||||| |       |||||    
T  8171472 gaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaagcgtattttttttaaaagagcaatgttctatttatatttttt-aaaag 8171570  T
Q  837 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||| ||| |||||||||||| |||||||| | |||||||| |||||||||||||||||||    
T  8171571 ataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgagga 8171637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 737 - 903
Target Start/End: Complemental strand, 29077389 - 29077224
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 836  Q
    ||||| ||||||||| |||||  | ||||||||| || || ||||||| |||||||||||| ||||||||| |||||||||||||| |       |||||    
T  29077389 gaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatatttttt-aaaag 29077291  T
Q  837 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||| |||||||||||||||| |||||| | |  ||||||| |||||||||||||||||||    
T  29077290 ataaatacaaggtgtcgtatatatgcggtacaccaagaggtgaaaatgactaccgtatacatgagga 29077224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 758 - 925
Target Start/End: Complemental strand, 36891728 - 36891560
Alignment:
Q  758 taagtgaaaagagatccgtaataaaataaaaacgtattttattt--aaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgta 855  Q
    ||||||||||||  ||||| |||||||||||||||||||| |||  ||||||| ||||||||||||| |       ||| ||| |||||||||||| |||    
T  36891728 taagtgaaaagaagtccgtgataaaataaaaacgtattttttttttaaaagaataatgttctatttatatttttt-aaatgatgaatacaatgtgttgta 36891630  T
Q  856 tatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaa 925  Q
    ||||| || |||| |||||  ||||||||||||||||||||||||||| ||| |||||| ||||| ||||    
T  36891629 tatattcggtacatccaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccatcctcccaaaa 36891560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 736 - 860
Target Start/End: Original strand, 9014111 - 9014233
Alignment:
Q  736 cgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaa 835  Q
    |||||| |||||||||||||| |||||||||||||  |||||||||||||||| |||||||| ||| ||||||||||||| ||||||||       ||||    
T  9014111 cgaattcggaggctcgactctataagtgaaaagaggcccgtaataaaataaaaccgtatttt-ttttaaagaacaatgttttatttaaa-ttttttaaaa 9014208  T
Q  836 gataaatacaatgtgtcgtatatat 860  Q
    |||||||||||||||| ||||||||    
T  9014209 gataaatacaatgtgttgtatatat 9014233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 722 - 903
Target Start/End: Complemental strand, 8239871 - 8239691
Alignment:
Q  722 cggggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctattt 821  Q
    ||||| ||| |||| ||||||||||||||| ||||| || |||||||||  |  | ||||||| |||||||||||| |||||||||  ||||||||||||    
T  8239871 cggggccgtccctaagaatttggaggctcggctctggaaatgaaaagaggccaatgataaaatgaaaacgtattttttttaaaagagtaatgttctattt 8239772  T
Q  822 aaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    | |       |||| ||||||| |||||| |||||||||| | ||||||||||| ||||||| | ||||||||| |||||||    
T  8239771 atattttttaaaaa-ataaatataatgtgccgtatatatgtggtacacccaaatgtgaaaatgattaccgtatatatgagga 8239691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 832 - 932
Target Start/End: Complemental strand, 20153276 - 20153176
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaacatcc 931  Q
    ||||||||||||||| |||| |||||||||||||| ||||||| |||||||||||| ||||||||||||||   || ||||||||||  |||||||||||    
T  20153276 aaaagataaatacaaagtgttgtatatatgcgataaacccaaagatgaaaatcactgccgtatacatgagggatctcaaaccacccttaaaaaaacatcc 20153177  T
Q  932 a 932  Q
    |    
T  20153176 a 20153176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 737 - 901
Target Start/End: Original strand, 18776698 - 18776862
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta-ttttatttaaaagaacaatgttctatttaaannnnnnnaaaa 835  Q
    ||||| ||||||||| ||||| || ||||||||| || || ||||||| ||||  || |||| ||||||||| |||||||||||||| |       ||||    
T  18776698 gaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaatataattttttttaaaagagcaatgttctatttatatttttt-aaaa 18776796  T
Q  836 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgag 901  Q
    ||||||||||| ||| |||||||||||| |||||||| || ||||||| |||||||||||||||||    
T  18776797 gataaatacaaggtgccgtatatatgcggtacacccagatgtgaaaatgactaccgtatacatgag 18776862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 724 - 903
Target Start/End: Original strand, 23550990 - 23551169
Alignment:
Q  724 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaa 823  Q
    ||||||| |||| ||||| ||||||||| |||||  | |||||||||  | || ||||||| ||||| |||||| || |||| | ||||| ||||||||     
T  23550990 gggtcgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacatatttttttaaaaaaagcaatgatctatttat 23551089  T
Q  824 annnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |       |||||||||||| || |||||||||||||||| |||| |||||  ||||||| |||||||||||||||||||    
T  23551090 atttttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgagga 23551169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 24339637 - 24339774
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggt 107  Q
    |||||||||||||||  || || |||||||||||||||| |||||||||| | ||| ||||||||||||| || ||||||| |||||| ||  |||| |     
T  24339637 acgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtatccgacaccgg 24339736  T
Q  108 gacacgctttatccgaggagtgtccgtacttcgtagat 145  Q
    ||||||| | |||||||||||| |||| |||| |||||    
T  24339737 gacacgcctaatccgaggagtgcccgtgcttcatagat 24339774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 724 - 928
Target Start/End: Original strand, 6765604 - 6765804
Alignment:
Q  724 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaa 823  Q
    |||| ||||||||||||  ||||||||   ||||||  |||||||||   |||||||||||||||| || |||| |   |||||||||||||||||||||    
T  6765604 gggttgttcctacgaatccggaggctcagttctgtagatgaaaagaggctcgtaataaaataaaaaagtttttttt---aaagaacaatgttctatttaa 6765700  T
Q  824 annnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaa 923  Q
    |       ||||||||||||||| |||||||||||| ||  |||| |||||  ||||||||||||||||||| | ||| | ||| |||||||||| | ||    
T  6765701 atttttt-aaaagataaatacaaggtgtcgtatataagccgtacatccaaaggtgaaaatcactaccgtatataagagtaacctcaaaccacccttccaa 6765799  T
Q  924 aaaca 928  Q
    |||||    
T  6765800 aaaca 6765804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 724 - 823
Target Start/End: Complemental strand, 5955614 - 5955515
Alignment:
Q  724 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaa 823  Q
    |||| ||||||| |||| | ||||| |||| |||||||| ||||||||   ||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  5955614 gggttgttcctatgaatctagaggcccgacactgtaagtaaaaagagacaagtaataaaataaaaacgtattttttttaaaagagcaatgttctatttaa 5955515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 728 - 918
Target Start/End: Complemental strand, 12981502 - 12981315
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 827  Q
    |||||||||||||  ||||| |||  |||||| ||||||||||   |||||||||||||||| || |||||  |||||||| |||||||||||| ||       
T  12981502 cgttcctacgaatccggaggttcggttctgtaggtgaaaagaggctcgtaataaaataaaaatgtttttta--taaaagaagaatgttctattt-aattt 12981406  T
Q  828 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccct 918  Q
        ||||||||||||||| ||  | |||||| ||| ||||| ||||  ||||||||||||| ||||| ||||||| ||| ||||||||||    
T  12981405 ttttaaaagataaatacaaggttccatatatacgcggtacacacaaaggtgaaaatcactactgtatatatgaggaacctcaaaccaccct 12981315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 737 - 926
Target Start/End: Original strand, 9014702 - 9014883
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 836  Q
    ||||| ||||||||| |||| |||| |||||||   ||||||||||||||||  ||||||| ||| || || |||| || ||||||||       |||||    
T  9014702 gaattcggaggctcggctctataagggaaaagaagcccgtaataaaataaaactgtatttttttttaatgatcaatcttttatttaaattttgt-aaaag 9014800  T
Q  837 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaa 926  Q
    ||||||||||||||||||||||||       |||||||  ||||||||||||||||||||||||| | ||| ||| |||||||| |||||    
T  9014801 ataaatacaatgtgtcgtatatat-------acccaaaggtgaaaatcactaccgtatacatgagtaacctcaaatcaccctcccaaaaa 9014883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 732 - 903
Target Start/End: Original strand, 20091207 - 20091379
Alignment:
Q  732 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt--aaaagaacaatgttctatttaaannnnn 829  Q
    |||| ||||| ||||||||| |||||  | |||||||||  | || ||||||| |||||||||||| |||  |||| ||||||| |||||||| |         
T  20091207 cctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtatttttttttaaaaaaaacaatgatctatttatattttt 20091306  T
Q  830 nnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
      |||||||||||| || ||| |||||||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  20091307 t-aaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 20091379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 832 - 903
Target Start/End: Original strand, 48983871 - 48983942
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||||| || |||||||||||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  48983871 aaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaataactaccgtatacatgagga 48983942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 724 - 903
Target Start/End: Original strand, 38414795 - 38414974
Alignment:
Q  724 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctattta 822  Q
    ||||||| |||| ||||| ||||||||||||||| || ||||||||||   || ||||||| |||||||||||| ||  |||||| ||| |||||||||     
T  38414795 gggtcgtccctaagaattcggaggctcgactctggaaatgaaaagagactagtcataaaatcaaaacgtatttttttgcaaaagagcaacgttctatttg 38414894  T
Q  823 aannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
     |       |||||||||||| || ||| |||||||||| | ||||||||||  ||||||| ||||| |||||||||||||    
T  38414895 tatttttt-aaaagataaatataaggtgacgtatatatgtggtacacccaaaggtgaaaatgactactgtatacatgagga 38414974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 724 - 788
Target Start/End: Original strand, 26917651 - 26917715
Alignment:
Q  724 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaa 788  Q
    ||||||||| ||||||| | |||||| |||||||||||||||||||| |||||||||||||||||    
T  26917651 gggtcgttcttacgaatctagaggcttgactctgtaagtgaaaagaggtccgtaataaaataaaa 26917715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 737 - 883
Target Start/End: Complemental strand, 26254163 - 26254017
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctatttaaannnnnnnaaaa 835  Q
    ||||| ||||||||| || ||  | ||||||||| || || ||||||| ||||| |||||| ||| |||||| |||||||||||||| |       ||||    
T  26254163 gaattcggaggctcggctttgggaatgaaaagaggtcagtgataaaatcaaaacatatttttttttaaaagagcaatgttctatttatatttttt-aaaa 26254065  T
Q  836 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaat 883  Q
    ||||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  26254064 gataaatacaaggtgccgtatatatgcggtacacccaaagatgaaaat 26254017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 728 - 901
Target Start/End: Original strand, 10329333 - 10329506
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaa-caatgttctatttaaann 826  Q
    |||||||| ||||| ||||||||| |||||  | |||||||||  | || ||||||| |||||||||||| || |||| || |||||||||||||| |      
T  10329333 cgttcctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaaagcaatgttctatttata-t 10329431  T
Q  827 nnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgag 901  Q
         |||||||||||| || ||| |||||||||| |  | |||||||  ||||||| |||||||||||||||||    
T  10329432 tttttaaaagataaatataaggtgccgtatatatgaggaaaacccaaaggtgaaaatgactaccgtatacatgag 10329506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 16341516 - 16341560
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcg 77  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  16341516 aaaatcacataattaagtgtaattatatgtgccggtgtcgtgtcg 16341560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 728 - 926
Target Start/End: Complemental strand, 18201313 - 18201118
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 827  Q
    |||||| ||||||  ||||||||| ||||| |||||||| ||  ||||||||||||||||||  |||||| |||||| |||||||| ||||||||||       
T  18201313 cgttcccacgaatccggaggctcggctctgcaagtgaaa-gatgtccgtaataaaataaaaatatatttt-tttaaacgaacaatgatctatttaaa-tt 18201217  T
Q  828 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaa 926  Q
        |||| ||||||||||  || | |||||||| | |||||| ||   ||||||||  |||| || ||||||||| ||| |||||||||||| |||||    
T  18201216 ttttaaaatataaatacaagatgccatatatatgtggtacacctaagggtgaaaatcgttaccttacacatgaggaacctcaaaccaccctcctaaaaa 18201118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 724 - 903
Target Start/End: Original strand, 24525601 - 24525783
Alignment:
Q  724 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaa----aagaacaatgttctat 819  Q
    ||||||| |||| ||||| ||||||||| |||||  | |||||||||  | || ||||||| |||||||||||| |||      || |||||||||||||    
T  24525601 gggtcgtccctaagaattcggaggctcggctctgggaatgaaaagaggcctgtgataaaatcaaaacgtattttttttttttttaaaaacaatgttctat 24525700  T
Q  820 ttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||| |       |||||||||||| || ||| ||| |||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  24525701 ttatatttttt-aaaagataaatataaggtgccgtgtatatgcggtacacccaaaagtgaaaatgactaccgtatacatgagga 24525783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 775 - 903
Target Start/End: Original strand, 36902898 - 36903022
Alignment:
Q  775 gtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaa 874  Q
    ||||||||||||||||||||||| ||   |||||||||||||||||||||       || ||||||||||||  |||||||||||||   |||||| |||    
T  36902898 gtaataaaataaaaacgtattttttt---aagaacaatgttctatttaaa-ttttttaatagataaatacaagatgtcgtatatatgttgtacacctaaa 36902993  T
Q  875 tatgaaaatcactaccgtatacatgagga 903  Q
      ||||||||| ||| |||||||||||||    
T  36902994 ggtgaaaatcagtactgtatacatgagga 36903022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 2334268 - 2334370
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgt 130  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||||| || ||||||| |||| ||||  |||| |  |||||  | |||||||||||||    
T  2334268 aaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtgtcg-tgtcggacacgacacatgtccgacactgaaacacgtctaatccgaggagtgt 2334366  T
Q  131 ccgt 134  Q
    ||||    
T  2334367 ccgt 2334370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 832 - 902
Target Start/End: Complemental strand, 28749784 - 28749715
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagg 902  Q
    ||||||||||||||| ||| |||||||||||| ||||| || || ||||||| ||||||||||||||||||    
T  28749784 aaaagataaatacaaggtgccgtatatatgcggtacactcagatgtgaaaat-actaccgtatacatgagg 28749715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 22602749 - 22602704
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcga 78  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||    
T  22602749 aaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcga 22602704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 7328730 - 7328686
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcg 77  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||    
T  7328730 aaaataacataatttagtgtaattatatgtgtcggtgtcgtgtcg 7328686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 15902842 - 15902886
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcg 77  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||    
T  15902842 aaaatcacataatttagtgtaattatatgtgtcggtgttgtgtcg 15902886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 18213077 - 18213033
Alignment:
Q  28 tttaaaaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||    
T  18213077 tttagaaaatcacataatttagtgtaattatatgtgtcggtgtcg 18213033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 794 - 903
Target Start/End: Original strand, 47984959 - 47985068
Alignment:
Q  794 ttttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgta 893  Q
    |||| ||||||| | |||||||||||||| |       |||||| ||||| || ||| |||||||||||| ||||||||||  ||||||| || ||||||    
T  47984959 ttttttttaaaaaagcaatgttctatttatatttttttaaaagaaaaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgaccaccgta 47985058  T
Q  894 tacatgagga 903  Q
    ||||||||||    
T  47985059 tacatgagga 47985068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 832 - 903
Target Start/End: Complemental strand, 10955559 - 10955488
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||||| || ||| |||||||||||| ||||| || |  ||||||| |||||||||||||||||||    
T  10955559 aaaagataaatataaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatgagga 10955488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 833 - 903
Target Start/End: Original strand, 12596315 - 12596385
Alignment:
Q  833 aaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||||||| ||| |||||||||| | |||||||| |  ||||||| |||||||||| ||||||||    
T  12596315 aaagataaatacaaggtgccgtatatatgtggtacacccagaggtgaaaatgactaccgtatgcatgagga 12596385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 15680827 - 15680868
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    ||||||||||||||||||||||||||||| ||| ||||||||    
T  15680827 aaaaaatcacataatttagtgtaattataagtgtcggtgtcg 15680868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 1433474 - 1433518
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcg 77  Q
    |||||||||| |||| ||||||||||||||| |||||||||||||    
T  1433474 aaaatcacatcatttggtgtaattatatgtgtcggtgtcgtgtcg 1433518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 640128 - 640171
Alignment:
Q  28 tttaaaaaatcacataatttagtgtaattatatgtgccggtgtc 71  Q
    ||||| ||||||||||||| |||||||||||||||| |||||||    
T  640128 tttaacaaatcacataattcagtgtaattatatgtgtcggtgtc 640171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 72
Target Start/End: Original strand, 3721113 - 3721152
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  3721113 aaaatcacataatttagtataattatatgtgtcggtgtcg 3721152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 26033502 - 26033399
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgt 130  Q
    |||||||||||||||| |||||||||| | ||| |||| |||||||| || | ||||  |||||||||  | || | ||||| | | |||||||||||||    
T  26033502 aaaaaatcacataattcagtgtaattacaagtgtcggtctcgtgtcggtgtcagacatgacacgtgtccgataccgcgacacacctaatccgaggagtgt 26033403  T
Q  131 ccgt 134  Q
    ||||    
T  26033402 ccgt 26033399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 76
Target Start/End: Complemental strand, 27229350 - 27229307
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtc 76  Q
    ||||||||||||||||||||||||||| ||  ||||||||||||    
T  27229350 aaaatcacataatttagtgtaattataagtatcggtgtcgtgtc 27229307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 9408375 - 9408333
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcgt 73  Q
    ||||||||||||||||||||||||||| | ||| |||||||||    
T  9408375 aaaaaatcacataatttagtgtaattacaagtgtcggtgtcgt 9408333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 849 - 903
Target Start/End: Original strand, 17800265 - 17800319
Alignment:
Q  849 tgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||||||   ||||||||||  |||||||||||||||||| ||||||||    
T  17800265 tgtcgtatatatgttgtacacccaaaagtgaaaatcactaccgtatgcatgagga 17800319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 18039017 - 18039063
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcg 77  Q
    |||||||||||||||| |||||||||| | ||| |||||||||||||    
T  18039017 aaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcg 18039063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 32308115 - 32308205
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtc 98  Q
    |||||||||| ||||  || || | |||||||||||||| ||||||||| |||||| | ||||||||||| ||  |||||| |||| ||||    
T  32308115 acgccgacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggacacgacacatgtc 32308205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 70
Target Start/End: Original strand, 41020515 - 41020553
Alignment:
Q  32 aaaaatcacataatttagtgtaattatatgtgccggtgt 70  Q
    |||||||||||||||||||||||||||||| | ||||||    
T  41020515 aaaaatcacataatttagtgtaattatatgcgtcggtgt 41020553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 2948698 - 2948739
Alignment:
Q  28 tttaaaaaatcacataatttagtgtaattatatgtgccggtg 69  Q
    |||| |||||||| |||||||||||||||||||||| |||||    
T  2948698 tttagaaaatcacgtaatttagtgtaattatatgtgtcggtg 2948739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 13770686 - 13770755
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcg 77  Q
    |||||||||||||||  || || ||||||| |||||||| |||||||||| | ||| || ||||||||||    
T  13770686 acgccgacacagctaataatttaaaaaaattacataattcagtgtaattacaagtgtcgttgtcgtgtcg 13770755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 18013115 - 18013070
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtc 76  Q
    ||||||| |||||||| |||||||||||||||| | ||||||||||    
T  18013115 aaaaaattacataattcagtgtaattatatgtgtcagtgtcgtgtc 18013070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 25481897 - 25481946
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaatta 57  Q
    |||||||||||||||  || || |||||||||||||||| ||||||||||    
T  25481897 acgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 25481946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 26329421 - 26329356
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtc 98  Q
    |||| |||| |||| |||||||||||||||| ||| ||||||||| || | ||||| |||||||||    
T  26329421 aaaaacacacaattcagtgtaattatatgtgtcggcgtcgtgtcggtgtcagacacgacacgtgtc 26329356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 27093452 - 27093415
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgt 70  Q
    ||||||||||||||||||||||||||||| | ||||||    
T  27093452 aaaatcacataatttagtgtaattatatgcgtcggtgt 27093415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 27184849 - 27184886
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgt 70  Q
    ||||||||||||||||||||||||||||| | ||||||    
T  27184849 aaaatcacataatttagtgtaattatatgcgtcggtgt 27184886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 1e-52; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 729 - 926
Target Start/End: Original strand, 41677098 - 41677296
Alignment:
Q  729 gttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctatttaaannn 827  Q
    ||||||||||||| ||||||||| |||||| |||||||||||| |  |||||||||||||||||||||| ||| |||||||||||||||||||||||       
T  41677098 gttcctacgaattcggaggctcggctctgtgagtgaaaagagacctataataaaataaaaacgtatttttttttaaaagaacaatgttctatttaaattt 41677197  T
Q  828 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaa 926  Q
        |||||||||||||||  |||||||||||||||||||| | |||  ||||||||||||| ||||||||||||| ||| ||||||||||||||||||    
T  41677198 ttttaaaagataaatacaagatgtcgtatatatgcgatacatctaaaggtgaaaatcactactgtatacatgaggaacctcaaaccaccctccaaaaaa 41677296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 725 - 926
Target Start/End: Original strand, 34048630 - 34048829
Alignment:
Q  725 ggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaa 824  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||| |   ||| ||| ||||||||||||||||||||||    
T  34048630 ggtcgttcctacgaatttggaggctcggctctgtaagtgaaaatagacccgtaataaaataaaaatg---ttttttttaaagaacaatgttctatttaaa 34048726  T
Q  825 nnnnnnnaaaagataaatacaatgtgtcg--tatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaa 922  Q
           ||||||||||||||||||||||  |||||||  |||||||||||| |||||||||||||| ||||||||||||||||| | ||||||||||||    
T  34048727 -cattttaaaagataaatacaatgtgtcgtatatatatatgatacacccaaagatgaaaatcactactgtatacatgaggatcctcataccaccctccaa 34048825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 726 - 926
Target Start/End: Original strand, 15167336 - 15167538
Alignment:
Q  726 gtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtatttta--tttaaaagaacaatgttctatttaa 823  Q
    ||||||||||||||| || ||||||  ||||||||||||||| |  |||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  15167336 gtcgttcctacgaatctgaaggctctgctctgtaagtgaaaaaaagtccgtaataaaataaaaacgtattttatttttaaaagaacaatgttctatttaa 15167435  T
Q  824 annnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccc-tccaa 922  Q
    |       |||||||||||| || |||| ||||||||||||||||||||||| |||||||||||| |||||||||||||| ||| ||||||||| |||||    
T  15167436 a-ttttttaaaagataaatataaagtgttgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaaccacccttccaa 15167534  T
Q  923 aaaa 926  Q
    ||||    
T  15167535 aaaa 15167538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 726 - 915
Target Start/End: Complemental strand, 15078938 - 15078750
Alignment:
Q  726 gtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaan 825  Q
    ||||||||||||||| || ||||||  |||||||||||||||||  |||||||||||||||||||||||||| |||||||||| |||||||||||||||     
T  15078938 gtcgttcctacgaatctgaaggctctgctctgtaagtgaaaagaagtccgtaataaaataaaaacgtattttttttaaaagaataatgttctatttaaa- 15078840  T
Q  826 nnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccac 915  Q
          |||||||||||| || |||  |||||||||| |||||||||||| |||||||||||| |||||||||||||| ||| |||||||    
T  15078839 atttttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaaccac 15078750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 728 - 926
Target Start/End: Original strand, 7944447 - 7944644
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 827  Q
    |||||||||||||  ||| |||||| ||||||| ||||||||| |||||||||||||||||| ||||||| ||||||||||||||||| ||||||||       
T  7944447 cgttcctacgaatcaggaagctcgattctgtaattgaaaagaggtccgtaataaaataaaaatgtattttttttaaaagaacaatgttttatttaaattt 7944546  T
Q  828 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaa 926  Q
        |||| |||||||||| ||| ||||||||||   ||||||||||  ||||||||||||||||||||||||||| ||| |||||||| ||| |||||    
T  7944547 tttaaaaa-ataaatacaaggtgccgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccaccatcccaaaaa 7944644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 730 - 886
Target Start/End: Original strand, 30674330 - 30674485
Alignment:
Q  730 ttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnn 829  Q
    ||||||||||| |||||||||| ||||||||||||||||||   |||||||||||||||||||||||| ||| ||||||||||||||||||||||         
T  30674330 ttcctacgaatctggaggctcggctctgtaagtgaaaagaggctcgtaataaaataaaaacgtatttttttttaaagaacaatgttctatttaaa-tgtt 30674428  T
Q  830 nnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcac 886  Q
      |||||||||||| || |||||||||||||||||||||| ||||  ||||||||||    
T  30674429 ttaaaagataaatataaggtgtcgtatatatgcgatacactcaaaggtgaaaatcac 30674485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 755 - 898
Target Start/End: Complemental strand, 8646356 - 8646215
Alignment:
Q  755 ctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgt 854  Q
    |||||||| ||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||       ||||||||||||||| || ||||    
T  8646356 ctgtaagtcaaaagagatccttaataaaataaaaacgtaatttttttaaaagaacaatgttctatttaaa-ttttttaaaagataaatacaaggtatcgt 8646258  T
Q  855 atatatgcgatacacccaaatatgaaaatcactaccgtatacat 898  Q
    |||||||| |||||| ||||| ||||||||||||||||||||||    
T  8646257 atatatgc-atacacgcaaatgtgaaaatcactaccgtatacat 8646215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 728 - 928
Target Start/End: Original strand, 39332333 - 39332529
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 827  Q
    |||||||||||||| |||||||||  |||||| |||||||||||  |||||||||||||||| || |||| |   |||||||||||||||||||||        
T  39332333 cgttcctacgaattcggaggctcggttctgtaggtgaaaagagactcgtaataaaataaaaaagtttttttt---aaagaacaatgttctatttaa-ttt 39332428  T
Q  828 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaac 927  Q
        ||||||||||||||| ||||| |||||| ||| |||| |||||  ||||||||||||||||||||||||||| ||| |||||||||||  ||||||    
T  39332429 tttaaaaagataaatacaaggtgtcatatataagcggtacatccaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccaccctctcaaaaac 39332528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 737 - 901
Target Start/End: Original strand, 34789796 - 34789959
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 836  Q
    |||| |||| ||||| |||| |||||||||| || |||||||||||||||||| ||||||| ||||||||||| ||||||||||||||       |||||    
T  34789796 gaatctggaagctcggctctataagtgaaaaaaggtccgtaataaaataaaaatgtattttttttaaaagaacgatgttctatttaaa-tctcttaaaag 34789894  T
Q  837 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgag 901  Q
    ||||||||||  |||||||||||||   ||||||||||  |||||||||||||||||||||||||    
T  34789895 ataaatacaagatgtcgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgag 34789959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 743 - 929
Target Start/End: Original strand, 5973047 - 5973232
Alignment:
Q  743 ggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaat 842  Q
    ||||||| | |||||||| ||||||||| || ||||||||||||||| |||||   ||||||||||||||||||||||||||       |||||||||||    
T  5973047 ggaggcttggctctgtaaatgaaaagaggtctgtaataaaataaaaatgtattcgttttaaaagaacaatgttctatttaaa-ttttttaaaagataaat 5973145  T
Q  843 acaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaacat 929  Q
    |||| ||||||||||||||   |||||||| | |||||||||| ||||||||||| ||||| ||| |||||||| |  |||||||||    
T  5973146 acaaggtgtcgtatatatgttgtacacccatagatgaaaatcattaccgtatacacgaggaacctcaaaccaccataaaaaaaacat 5973232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 728 - 916
Target Start/End: Complemental strand, 11290367 - 11290175
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-----aaaagaacaatgttctattta 822  Q
    ||||||||||||||  ||| ||||||| ||||||||||||||||   ||||||||||||||| || |||| |||     |||||||||||||| ||||||    
T  11290367 cgttcctacgaattcagagactcgactttgtaagtgaaaagagacatgtaataaaataaaaatgtttttttttttttttaaaagaacaatgttttattta 11290268  T
Q  823 aannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccacc 916  Q
    ||       ||||||||||||||| ||||||||||||||   ||||| ||||  ||||||||||||||||||||||||| | ||| ||||||||    
T  11290267 aatttttt-aaaagataaatacaaggtgtcgtatatatgttgtacactcaaaggtgaaaatcactaccgtatacatgagcaacctcaaaccacc 11290175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 758 - 918
Target Start/End: Original strand, 25561448 - 25561607
Alignment:
Q  758 taagtgaaaagagatccgtaataaaataaaaacgta--ttttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgta 855  Q
    |||||||||||||  |||||| ||||||||||||||  |||| |||  ||||| |||||||||||||||        |||||||||||||| ||| ||||    
T  25561448 taagtgaaaagaggcccgtaacaaaataaaaacgtaatttttttttttaagaataatgttctatttaaatctttt--aaagataaatacaaggtgccgta 25561545  T
Q  856 tatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccct 918  Q
    ||||||||||| |||||||| ||||||||||| ||||||||||||||| ||| ||||||||||    
T  25561546 tatatgcgata-acccaaatgtgaaaatcactgccgtatacatgaggaacctcaaaccaccct 25561607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 732 - 903
Target Start/End: Original strand, 23606558 - 23606728
Alignment:
Q  732 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnn 831  Q
    |||| ||||| ||||||||| |||||  | |||||||||| | || ||||||| |||||||||||| ||||||||| |||||||||||||| |           
T  23606558 cctaagaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttata-tttttt 23606656  T
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||||| || ||| |||||||||||| ||||||||||  | ||||| |||||||||||||||||||    
T  23606657 aaaagataaatataaggtgccgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgagga 23606728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 832 - 926
Target Start/End: Complemental strand, 5942771 - 5942677
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaa 926  Q
    |||||||||||||||  |||||||||| |||| ||||||||||  ||||||||||||||||||||||||||| ||| |||||||||||| |||||    
T  5942771 aaaagataaatacaagatgtcgtatatgtgcggtacacccaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccaccctcccaaaaa 5942677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 737 - 903
Target Start/End: Complemental strand, 45475986 - 45475821
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 836  Q
    ||||| ||||||||| ||| |  | |||||||||  | || ||||||| |||||||||||| ||||||||| |||||||||||||| |       |||||    
T  45475986 gaattcggaggctcggctcggggaatgaaaagaggccagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatatttttt-aaaag 45475888  T
Q  837 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||| ||| |||||||||||| |||||||| |  ||||||| |||||||||||||||||||    
T  45475887 ataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgagga 45475821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 738 - 903
Target Start/End: Original strand, 13534622 - 13534785
Alignment:
Q  738 aatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaaga 837  Q
    |||| ||||||||| |||||  | |||||||||  | || ||||||| |||||||||||| ||||||||| |||||||||||||| |       ||||||    
T  13534622 aattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatatttttt-aaaaga 13534720  T
Q  838 taaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||||| ||| |||||||||||| |||||||| |  ||||||| |||||||||||||||||||    
T  13534721 taaatacaa-gtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 13534785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 738 - 903
Target Start/End: Original strand, 13624162 - 13624325
Alignment:
Q  738 aatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaaga 837  Q
    |||| ||||||||| |||||  | |||||||||  | || ||||||| |||||||||||| ||||||||| |||||||||||||| |       ||||||    
T  13624162 aattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatatttttt-aaaaga 13624260  T
Q  838 taaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||||| ||| |||||||||||| |||||||| |  ||||||| |||||||||||||||||||    
T  13624261 taaatacaa-gtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 13624325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 727 - 916
Target Start/End: Original strand, 14509904 - 14510094
Alignment:
Q  727 tcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta---ttttatttaaaagaacaatgttctatttaa 823  Q
    ||||||||||||||||||||  |||  |||| ||||||||| ||  ||||||||||||||||| |||   |||| ||| |||||||||||||| ||||||    
T  14509904 tcgttcctacgaatttggagattcggttctgcaagtgaaaataggcccgtaataaaataaaaatgtattttttttttttaaagaacaatgttcaatttaa 14510003  T
Q  824 annnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatg-aaaatcactaccgtatacatgaggatccttaaaccacc 916  Q
    |       |||||| ||||| || ||||||||||||  || ||||||||||| || ||||||||||||||||||||||| | ||| ||||||||    
T  14510004 a-ttttttaaaagacaaatataaggtgtcgtatata--cggtacacccaaatgtgaaaaatcactaccgtatacatgagtaacctcaaaccacc 14510094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 744 - 903
Target Start/End: Complemental strand, 30883493 - 30883333
Alignment:
Q  744 gaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta--ttttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaa 841  Q
    |||||||| ||||| || |||||||||  | || ||||||| ||||| ||  |||| ||||||||| |||||||||||||| |       ||||||||||    
T  30883493 gaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataatttttttttaaaagagcaatgttctatttatatttttt-aaaagataaa 30883395  T
Q  842 tacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||||| |||||||||||| |||||||| |  ||||||| |||||||||||||||||||    
T  30883394 tacaatgtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 30883333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 33 - 144
Target Start/End: Complemental strand, 26902214 - 26902103
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgtcc 132  Q
    |||||||||||||| |||||||||||||||| ||||||||| |   || ||||||| ||||||||||  ||||| ||||||| ||||| |||||||||||    
T  26902214 aaaatcacataattcagtgtaattatatgtgtcggtgtcgtatgagtgtcggacacgacacgtgtctggcacggggacacgccttatctgaggagtgtcc 26902115  T
Q  133 gtacttcgtaga 144  Q
    || |||| ||||    
T  26902114 gtgcttcataga 26902103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 725 - 807
Target Start/End: Complemental strand, 5942848 - 5942766
Alignment:
Q  725 ggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaaga 807  Q
    ||||||||||||||||  ||| |||||| |||||||||||||||||  ||||||||||||||||| ||||||| |||||||||    
T  5942848 ggtcgttcctacgaatccggaagctcgattctgtaagtgaaaagaggaccgtaataaaataaaaatgtattttttttaaaaga 5942766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 737 - 903
Target Start/End: Original strand, 2952152 - 2952320
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt---aaaagaacaatgttctatttaaannnnnnnaa 833  Q
    ||||| ||||||||| ||||| || |||||||||  | || ||||||| ||||| || ||| |||   |||||| |||||||||||||| |       ||    
T  2952152 gaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataatttttttttaaaaagagcaatgttctatttatatttttt-aa 2952250  T
Q  834 aagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||||||||| ||| |||||||||||| |||||||| | |||||||| |||||||||||||||||||    
T  2952251 aagataaatacaaagtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgagga 2952320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 737 - 903
Target Start/End: Complemental strand, 10917560 - 10917395
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 836  Q
    ||||| ||||||||| |||||  | |||||||||  | || ||||||| |||||||||||| || |||| ||||||| |||||||| |       |||||    
T  10917560 gaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaaacaatgatctatttatatttttt-aaaag 10917462  T
Q  837 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||| || ||| |||||||||||| ||||||||||  ||||||| |||||| ||||||||||||    
T  10917461 ataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccttatacatgagga 10917395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 8 - 152
Target Start/End: Original strand, 22651971 - 22652115
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggt 107  Q
    |||||||||||||||  || || |||||||||||||||| | | |||||| | ||| ||||||||||||| || ||||||| ||| |||||  |||| |     
T  22651971 acgccgacacagctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtcgtgtcggtgtcggacacgacatgtgtccgacaccgg 22652070  T
Q  108 gacacgctttatccgaggagtgtccgtacttcgtagatgtaaagt 152  Q
    ||||||  | ||||||||||||||||| |||| ||| ||||||||    
T  22652071 gacacgtctaatccgaggagtgtccgtgcttcatagctgtaaagt 22652115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 15816193 - 15816062
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggt 107  Q
    ||||||||||| |||  || || ||||||||||||||||||||||||||||| ||| ||||||||||| | || ||||||| |||||  ||  |||| |     
T  15816193 acgccgacacaactaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgttggtgtcggacacgacacgaatccgacaccgg 15816094  T
Q  108 gacacgctttatccgaggagtgtccgtacttc 139  Q
    ||||||| | ||||||| ||||||||| ||||    
T  15816093 gacacgcctaatccgagaagtgtccgtgcttc 15816062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 832 - 926
Target Start/End: Complemental strand, 5721634 - 5721540
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaa 926  Q
    ||||||||||||||| ||| | ||||||  || ||||||||||  |||||||||||||||||||| |||||| ||| |||||||||||| |||||    
T  5721634 aaaagataaatacaaggtgccctatataatcggtacacccaaaagtgaaaatcactaccgtatacctgaggaacctcaaaccaccctcccaaaaa 5721540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 732 - 903
Target Start/End: Original strand, 23798189 - 23798360
Alignment:
Q  732 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtat-tttatttaaaagaacaatgttctatttaaannnnnn 830  Q
    |||| ||||| ||||||||| |||||  |  |||||||| ||  | ||||||| ||||||||| ||| ||| ||||| |||||||||||||| |          
T  23798189 cctaagaattcggaggctcggctctgggaacgaaaagaggtcaatgataaaatcaaaacgtatattttttttaaagagcaatgttctatttatatttttt 23798288  T
Q  831 naaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
     |||||||||||| || ||| |||||||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  23798289 -aaaagataaatataaggtgccgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgagga 23798360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 832 - 926
Target Start/End: Original strand, 23941119 - 23941213
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaa 926  Q
    ||||||||||||||| ||||| |||||| |||||||||||||| ||||||||||| | | |||| | ||||| ||| |||||||||||| |||||    
T  23941119 aaaagataaatacaaggtgtcatatataagcgatacacccaaagatgaaaatcacaatcatatatacgaggaacctcaaaccaccctcccaaaaa 23941213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 735 - 824
Target Start/End: Original strand, 34868108 - 34868198
Alignment:
Q  735 acgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta-ttttatttaaaagaacaatgttctatttaaa 824  Q
    |||||| | |||||||| ||| ||||||||||||||| || |||||||||||||||||| |||| ||| |||||| |||||||||||||||    
T  34868108 acgaatctcgaggctcggctccgtaagtgaaaagagacccataataaaataaaaacgtattttttttttaaagaataatgttctatttaaa 34868198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 745 - 901
Target Start/End: Complemental strand, 41879341 - 41879187
Alignment:
Q  745 aggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatac 844  Q
    ||||||| |||||  | ||||||||| |  || ||||||| |||||||||||| |||||||||||||||||||||||| |       |||||||||||||    
T  41879341 aggctcggctctgggaatgaaaagaggttagtgataaaattaaaacgtatttt-tttaaaagaacaatgttctatttatatttttt-aaaagataaatac 41879244  T
Q  845 aatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgag 901  Q
    || ||  |||||||||||| |||| |||||  ||||||| ||||||| |||||||||    
T  41879243 aaggtaccgtatatatgcggtacatccaaaggtgaaaatgactaccgaatacatgag 41879187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 732 - 903
Target Start/End: Complemental strand, 42600957 - 42600786
Alignment:
Q  732 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaa-caatgttctatttaaannnnnn 830  Q
    |||| ||||| ||||||||| ||||| || ||||||||| || || ||||||| ||||||| |||| ||| ||| || ||||| |||||||| |          
T  42600957 cctaagaattcggaggctcggctctgaaaatgaaaagaggtcagtgataaaatcaaaacgtttttttttttaaaaaagcaatgatctatttatatttttt 42600858  T
Q  831 naaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
     |||||||||||| || ||| |||||||||| | ||||||||||  ||||||| |||||||||||||||||||    
T  42600857 -aaaagataaatataaggtgccgtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgagga 42600786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 753 - 913
Target Start/End: Complemental strand, 8103067 - 8102906
Alignment:
Q  753 ctctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatt--taaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtg 850  Q
    |||||||| |||||||||  |  |||||||||||||| ||||||| ||  ||||| || |||||| ||||||||       ||||||||||||||| |||    
T  8103067 ctctgtaaatgaaaagaggcctataataaaataaaaatgtatttttttcttaaaataataatgttatatttaaatttttt-aaaagataaatacaaggtg 8102969  T
Q  851 tcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaacc 913  Q
      ||||||||||| |||||| |||  ||||||||| ||||||||||||||||| ||| |||||    
T  8102968 cagtatatatgcggtacacctaaaggtgaaaatcattaccgtatacatgaggaacctcaaacc 8102906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 728 - 824
Target Start/End: Original strand, 38009076 - 38009173
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaac-gtattttatttaaaagaacaatgttctatttaaa 824  Q
    |||||||| ||||  |||||||||  ||||||| ||||||||  |||||||||||||||||||  | |||| ||||||||||||||||||||||||||    
T  38009076 cgttcctatgaatccggaggctcggttctgtaactgaaaagaagtccgtaataaaataaaaacttttttttttttaaaagaacaatgttctatttaaa 38009173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 139
Target Start/End: Complemental strand, 34451076 - 34450965
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcga-----tgccggacaccacacgtgtctaacacggtgacacgctttatccgaggag 127  Q
    ||||||||| |||  |||||||||||||||| |||||||||||||      || ||||||| |||||||||| |||||| ||||||| |||||| |||||    
T  34451076 aaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggag 34450977  T
Q  128 tgtccgtacttc 139  Q
    ||||||| ||||    
T  34450976 tgtccgtgcttc 34450965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 18964192 - 18964297
Alignment:
Q  28 tttaaaaaatcacataatttagtgtaattatatgtgccggtgt--cgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgagg 125  Q
    |||| |||||||||||||| | |||||||||||||| ||||||  |||||||  |  | |||| |||| |||||||||||| ||||||| ||||||||||    
T  18964192 tttagaaaatcacataattcaatgtaattatatgtgtcggtgtgtcgtgtcggcgttgaacacgacacctgtctaacacggagacacgccttatccgagg 18964291  T
Q  126 agtgtc 131  Q
    ||||||    
T  18964292 agtgtc 18964297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 737 - 903
Target Start/End: Original strand, 3048450 - 3048616
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta-ttttatttaaaagaacaatgttctatttaaannnnnnnaaaa 835  Q
    ||||| ||||||||| ||||| || |||||||||  | || ||||||| ||||| || |||| ||||||||| |||| | ||||||| |       ||||    
T  3048450 gaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatatactatttatatttttt-aaaa 3048548  T
Q  836 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||||||| ||| |||||||||||| |||||| | | |||||||| ||||||||||||| |||||    
T  3048549 gataaatacaaggtgccgtatatatgcggtacacctagagatgaaaatgactaccgtatacacgagga 3048616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 728 - 781
Target Start/End: Original strand, 38843420 - 38843473
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataa 781  Q
    |||||||||||||||||||||||| |||| ||||||||||||| ||||||||||    
T  38843420 cgttcctacgaatttggaggctcggctctctaagtgaaaagaggtccgtaataa 38843473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 98
Target Start/End: Complemental strand, 2572097 - 2572030
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtc 98  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||||  || ||||||| |||||||||    
T  2572097 aaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtgtctgtgtcggacacgacacgtgtc 2572030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 737 - 901
Target Start/End: Original strand, 5860675 - 5860841
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta---ttttatttaaaagaacaatgttctatttaaannnnnnnaa 833  Q
    ||||||||||||||| ||||| || ||||||||| ||  | ||||||| ||||| ||   |||  ||| ||||| |||||||||||||| |       ||    
T  5860675 gaatttggaggctcggctctggaaatgaaaagaggtcaatgataaaatcaaaacataatatttatttttaaagagcaatgttctatttatatttttt-aa 5860773  T
Q  834 aagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgag 901  Q
    ||||||||||||| ||| |||||||||||| |||||||| |  ||||||| |||||| ||||||||||    
T  5860774 aagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgag 5860841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 29510368 - 29510237
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggt 107  Q
    |||||||||||||||  || || ||||||||||| |||| ||| |||||| | ||| |||||| |||||| || ||||||| || ||||||  |||| |     
T  29510368 acgccgacacagctaataatttgaaaaaatcacaaaattcagtataattacaagtgtcggtgtagtgtcggtgtcggacacgacgcgtgtccgacaccgg 29510269  T
Q  108 gacacgctttatccgaggagtgtccgtacttc 139  Q
    ||||| | | ||||||||||||||||| ||||    
T  29510268 gacacacctaatccgaggagtgtccgtgcttc 29510237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 737 - 903
Target Start/End: Original strand, 37430091 - 37430257
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctatttaaannnnnnnaaaa 835  Q
    ||||| ||||||||| |||||  | |||||||||  | || ||||||| ||||||| |||| ||| |||||| | |||||||||||| |       ||||    
T  37430091 gaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtttttttttttaaaagagcgatgttctatttatatttttt-aaaa 37430189  T
Q  836 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||||||| ||| |||||||||||| |||||| | |  | ||||| |||||||||||||||||||    
T  37430190 gataaatacaaggtgccgtatatatgcgttacacctagaggtaaaaatgactaccgtatacatgagga 37430257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 144
Target Start/End: Complemental strand, 11927125 - 11927014
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgtcc 132  Q
    |||||||||||||| |||||||||||||||| ||||||||||| | || |  |||| ||| || || ||||  | ||||||| | |||||| ||||||||    
T  11927125 aaaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgtcatacacgacatgtatccaacatcgagacacgcctaatccgatgagtgtcc 11927026  T
Q  133 gtacttcgtaga 144  Q
    || |||| ||||    
T  11927025 gtgcttcataga 11927014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 728 - 823
Target Start/End: Original strand, 34812682 - 34812783
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt------aaaagaacaatgttctattt 821  Q
    ||||||||| |||  || ||||||||||||||||||||||||| |  || |||||||||||| ||||||| |||      ||||||||||| ||||||||    
T  34812682 cgttcctacaaatccgggggctcgactctgtaagtgaaaagaggtatgtcataaaataaaaatgtattttttttttttaaaaaagaacaatattctattt 34812781  T
Q  822 aa 823  Q
    ||    
T  34812782 aa 34812783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 39954343 - 39954277
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtg 74  Q
    |||||||||| ||||  || || | ||||||||||||||||||||||||||||||| ||||| ||||    
T  39954343 acgccgacaccgctaataatttgagaaaatcacataatttagtgtaattatatgtgacggtgccgtg 39954277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 145
Target Start/End: Original strand, 29447467 - 29447576
Alignment:
Q  36 atcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgtccgta 135  Q
    ||||||||||| ||||||||||||||||  |||||||||||| || | ||||| ||| |||||  |||| | |||| |  | ||| |||||||||||||     
T  29447467 atcacataattaagtgtaattatatgtgttggtgtcgtgtcggtgtcagacacgacatgtgtccgacaccgggacaggtctaatcggaggagtgtccgtg 29447566  T
Q  136 cttcgtagat 145  Q
    |||| |||||    
T  29447567 cttcatagat 29447576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 13844660 - 13844596
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    |||||||||| ||||  || || | |||||||||||||| |||||||||||||||| ||||||||    
T  13844660 acgccgacactgctaataatttgagaaaatcacataattgagtgtaattatatgtgtcggtgtcg 13844596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 24362239 - 24362175
Alignment:
Q  35 aatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatg-ccggacaccacacgtgtc 98  Q
    |||||||||||| |||||||||||||||| |  |||||||||| || |||||||| |||||||||    
T  24362239 aatcacataattcagtgtaattatatgtgtcaatgtcgtgtcggtgtccggacacgacacgtgtc 24362175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 725 - 789
Target Start/End: Complemental strand, 29364532 - 29364468
Alignment:
Q  725 ggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaa 789  Q
    |||||||||||||||||| ||| |||| |||||||||| |||||||| ||||   ||||||||||    
T  29364532 ggtcgttcctacgaatttagagactcggctctgtaagtaaaaagagacccgtttaaaaataaaaa 29364468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 72
Target Start/End: Complemental strand, 4786377 - 4786338
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  4786377 aaaatcacataattcagtgtaattatatgtgtcggtgtcg 4786338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 11944685 - 11944732
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatg 80  Q
    |||||||||||| | |||||||||||||||| ||||||||||| ||||    
T  11944685 aaaatcacataactcagtgtaattatatgtgtcggtgtcgtgttgatg 11944732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 88
Target Start/End: Complemental strand, 25172737 - 25172682
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacac 88  Q
    ||||| ||||| |||| |||||||||||||| |||||||||||| ||| |||||||    
T  25172737 aaaattacatattttaatgtaattatatgtgtcggtgtcgtgtcaatgtcggacac 25172682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 72
Target Start/End: Complemental strand, 33405423 - 33405384
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    |||| |||||||||||||||||||||||||| ||||||||    
T  33405423 aaaaacacataatttagtgtaattatatgtgtcggtgtcg 33405384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 8342990 - 8343032
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcgt 73  Q
    ||||||||||||||||||||||||||| | ||| |||||||||    
T  8342990 aaaaaatcacataatttagtgtaattacaagtgtcggtgtcgt 8343032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 8847277 - 8847315
Alignment:
Q  34 aaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    ||||||||||||| |||||||||||||||| ||||||||    
T  8847277 aaatcacataattcagtgtaattatatgtgtcggtgtcg 8847315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 63
Target Start/End: Original strand, 14731732 - 14731762
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtg 63  Q
    |||||||||||||||||||||||||||||||    
T  14731732 aaaatcacataatttagtgtaattatatgtg 14731762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 25566841 - 25566903
Alignment:
Q  13 gacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgt 75  Q
    ||||||||||  || || |||||||||||||||| |||||||||| | ||| |||||||||||    
T  25566841 gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 25566903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 139
Target Start/End: Complemental strand, 29447149 - 29447043
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgtcc 132  Q
    |||||||||||||| | ||||| || | ||| ||||||| ||||| || ||||||| ||| |||||| ||||   ||||||| | |||| ||||||||||    
T  29447149 aaaatcacataattcaatgtaactacaagtgtcggtgtcatgtcggtgtcggacacgacatgtgtctgacaccaggacacgcctaatcctaggagtgtcc 29447050  T
Q  133 gtacttc 139  Q
    || ||||    
T  29447049 gtgcttc 29447043  T

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Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 139
Target Start/End: Original strand, 3025609 - 3025666
Alignment:
Q  82 cggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgtccgtacttc 139  Q
    ||||||| |||||||||| |||| ||||||||  | ||||||||||||||||| ||||    
T  3025609 cggacacgacacgtgtctgacactgtgacacggctaatccgaggagtgtccgtgcttc 3025666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 20873087 - 20873128
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    ||||||||||||||||||||||||||| | ||| ||||||||    
T  20873087 aaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 20873128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 24613519 - 24613579
Alignment:
Q  11 ccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    |||||||||||| | ||||| ||||||||||||||| |||||||||| | ||| ||||||||    
T  24613519 ccgacacagcta-ataatttgaaaaatcacataattaagtgtaattacaagtgtcggtgtcg 24613579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 6e-52; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 728 - 926
Target Start/End: Original strand, 36118383 - 36118579
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 827  Q
    |||||||||||||| ||| ||||| || |||||||||||||||   |||||||||||||||||||||||| |||||| |||||||||||||||||||       
T  36118383 cgttcctacgaattcggaagctcggctttgtaagtgaaaagaggctcgtaataaaataaaaacgtatttt-tttaaatgaacaatgttctatttaaattt 36118481  T
Q  828 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaa 926  Q
        ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||  ||||||||| |||||||    
T  36118482 ttt-aaaagataaatacaaggtgtcgtatatatgtgatacacccaaatatgaaaatcactaccgtatacatgagtaacctctaaccacccttcaaaaaa 36118579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 729 - 926
Target Start/End: Original strand, 39329317 - 39329513
Alignment:
Q  729 gttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnn 828  Q
    |||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||| ||||||        
T  39329317 gttcctacgaatttggaggctcggttctgtaagtgaaaagaggtccgtaataaaataaaaacatattttttttaaaagaacaatgttctctttaaa-ttt 39329415  T
Q  829 nnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaa 926  Q
       ||||||||||||||| |||| ||||||||| |||||||||||| |||||||||  ||||||||||| ||||| | | |||||||||||| |||||    
T  39329416 tttaaaagataaatacaaggtgttgtatatatgtgatacacccaaagatgaaaatccataccgtatacaggaggaacatcaaaccaccctcccaaaaa 39329513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 733 - 926
Target Start/End: Complemental strand, 52468463 - 52468272
Alignment:
Q  733 ctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnna 832  Q
    ||||||||| ||||||||| ||||||| |||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||       |    
T  52468463 ctacgaattcggaggctcggctctgtaggtgaaaagaggtctgtaataaaataaaaacgtatttt-tttaaaagaacaatgttctatttaaa-tttttta 52468366  T
Q  833 aaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaa 926  Q
    |||||||||||||| ||| ||||||||||  ||||| |||||  |||||||||||||||||| |||||||| ||| |||||||| ||| |||||    
T  52468365 aaagataaatacaaggtgccgtatatatgttatacatccaaaggtgaaaatcactaccgtatgcatgaggaacctcaaaccaccttcccaaaaa 52468272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 728 - 920
Target Start/End: Complemental strand, 27112212 - 27112022
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 827  Q
    ||||||||| ||| ||||||||||  |||||||||||||||||| |||||||||||||| |  ||||||| |||||| ||||||||||| |||||||       
T  27112212 cgttcctacaaatctggaggctcggttctgtaagtgaaaagagacccgtaataaaataagattgtatttt-tttaaacgaacaatgttcaatttaaattt 27112114  T
Q  828 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcc 920  Q
        ||||||||||||||| ||| | ||||||||||||||||| |||| ||||||||||||||||||||||||||| ||| ||||||||||||    
T  27112113 ttt-aaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaaccaccctcc 27112022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 728 - 918
Target Start/End: Original strand, 10041923 - 10042113
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta-ttttatttaaaagaacaatgttctatttaaann 826  Q
    |||||||||||||  ||||| ||   ||||||||||||||||| |||||| |||||||||| |||| |||| ||||||||||||||||||||||||||      
T  10041923 cgttcctacgaatcgggaggttcagttctgtaagtgaaaagaggtccgtagtaaaataaaagcgtatttttttttaaaagaacaatgttctatttaaatt 10042022  T
Q  827 nnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccct 918  Q
         |||| |||||||||| ||| ||||| |||| |||||||| |||| ||||||||||||||||||||| ||||| ||| ||| ||||||    
T  10042023 tttaaaaaa-ataaatacaaggtgccgtatgtatgtgatacacctaaatgtgaaaatcactaccgtatacaggaggaacctcaaatcaccct 10042113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 728 - 916
Target Start/End: Original strand, 37744827 - 37745021
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt----aaaagaacaat--gttctattt 821  Q
    |||||||||||||| | |||||||||||| ||| |||||||||  ||||| ||||||||||||||||||| |||    |||| ||||||  |||||||||    
T  37744827 cgttcctacgaattcgaaggctcgactctataattgaaaagaggcccgtattaaaataaaaacgtattttttttttttaaaacaacaatatgttctattt 37744926  T
Q  822 aaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccacc 916  Q
    |||       |||||||||||| || |||||| |||||||||||||| |||||  |||||||||||||||||||| |||||| ||| ||||||||    
T  37744927 aaatttttttaaaagataaatataaggtgtcgcatatatgcgatacatccaaaggtgaaaatcactaccgtatacttgaggaacctcaaaccacc 37745021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 744 - 926
Target Start/End: Complemental strand, 24397102 - 24396920
Alignment:
Q  744 gaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctatttaaannnnnnnaaaagataaat 842  Q
    |||||||  |||||||||||||||||||   ||||||||||||||||||||||| ||| ||||||||||| || ||||||||       |||||||||||    
T  24397102 gaggctcagctctgtaagtgaaaagagacatgtaataaaataaaaacgtatttttttttaaaagaacaatattttatttaaatttttt-aaaagataaat 24397004  T
Q  843 acaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaa 926  Q
    | || |||  ||||||||| ||||||| ||||  |||||||||||| |||||||||||||| ||| |||| |||||||||||||    
T  24397003 ataaggtgcagtatatatgtgatacactcaaaggtgaaaatcactatcgtatacatgaggaacctcaaactaccctccaaaaaa 24396920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 728 - 823
Target Start/End: Complemental strand, 5893195 - 5893099
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta-ttttatttaaaagaacaatgttctatttaa 823  Q
    ||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||| ||| |||| |||||||||||||||||||||||||    
T  5893195 cgttcctacaaatttggaggctcggctctgtaagtgaaaagaggtccgtaataaaataaaaatgtatttttttttaaaagaacaatgttctatttaa 5893099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 737 - 903
Target Start/End: Original strand, 43455464 - 43455629
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 836  Q
    ||||| |||||||||||||||  | ||||||||| || || ||||||| |||||||||| | ||||||||| |||||||||||||| |       |||||    
T  43455464 gaattcggaggctcgactctgggaatgaaaagaggtcagtgataaaatcaaaacgtattatttttaaaagagcaatgttctatttatatttttt-aaaag 43455562  T
Q  837 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||| || ||| |||||||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  43455563 ataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 43455629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 733 - 919
Target Start/End: Original strand, 36362798 - 36362984
Alignment:
Q  733 ctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacg--tattttatttaaaagaacaatgttctatttaaannnnnn 830  Q
    |||||||| | |||||  ||||||||||||||||||||| || ||||||||||||||    ||| || ||||||||||||||| ||| ||||||          
T  36362798 ctacgaatctagaggcctgactctgtaagtgaaaagagacccataataaaataaaaaaaaatatattttttaaaagaacaatgctctgtttaaatttttt 36362897  T
Q  831 naaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctc 919  Q
     ||||||||||||||| ||| ||||||||||| |||||||||||| || ||||||||||| ||||||| |||| ||| |||||||||||    
T  36362898 -aaaagataaatacaaagtgccgtatatatgcaatacacccaaatgtggaaatcactaccatatacat-aggaacctcaaaccaccctc 36362984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 728 - 900
Target Start/End: Complemental strand, 36178852 - 36178684
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 827  Q
    ||||||||| |||||||| ||||   |||||||||||||||||| |||||||||| |       | |||| ||| | ||||||||||||||||||||       
T  36178852 cgttcctacaaatttggacgctcagttctgtaagtgaaaagagacccgtaataaatttttt---tttttttttttagagaacaatgttctatttaaatta 36178756  T
Q  828 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatga 900  Q
        ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  36178755 ttt-aaaagataaatacaaggtgtcgtatatatgcgatacacccaaatgtgaaaatcactaccttatacatga 36178684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 724 - 885
Target Start/End: Original strand, 39655173 - 39655334
Alignment:
Q  724 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacg-tattttatttaaaagaacaatgttctattta 822  Q
    ||||||||||||| ||| |||||||||||||||||| ||||||||||   |||||||||||||||||| | | || || |||||||||||||||||||||    
T  39655173 gggtcgttcctacaaatctggaggctcgactctgtaggtgaaaagaggctcgtaataaaataaaaacgttctatttttaaaaagaacaatgttctattta 39655272  T
Q  823 aannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatca 885  Q
    ||       ||||||||||||||| ||  || ||||||||| ||||||||||  |||||||||    
T  39655273 aa-ttttttaaaagataaatacaaagttccgcatatatgcggtacacccaaaggtgaaaatca 39655334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 730 - 926
Target Start/End: Complemental strand, 40217411 - 40217217
Alignment:
Q  730 ttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnn 829  Q
    ||||||||||||  ||||||||  | |||||||||||||||   ||||||||||||||||||| |||| ||| |||||||| |   |||||||||         
T  40217411 ttcctacgaattcagaggctcggttttgtaagtgaaaagaggctcgtaataaaataaaaacgtttttttttttaaagaacatta--ctatttaaattttt 40217314  T
Q  830 nnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccc-tccaaaaaa 926  Q
      |||||||||||| || ||||||||||||||||||||| ||||| |||||||||| || | |||||||||| | ||| ||||||||| |||||||||    
T  40217313 t-aaaagataaatataaggtgtcgtatatatgcgatacatccaaagatgaaaatcattagcatatacatgagtaacctcaaaccacccttccaaaaaa 40217217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 737 - 903
Target Start/End: Complemental strand, 47129161 - 47128996
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 836  Q
    ||||| ||||||||| ||||| || |||||||||  | || ||||||| |||| ||||||| |||||||||||||||||||||||| |       |||||    
T  47129161 gaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaatgtattttttttaaaagaacaatgttctatttata-ttttttaaaag 47129063  T
Q  837 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||| ||| |||||||||||| |||||||| |  | ||||| |||||||||||||||||||    
T  47129062 ataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagga 47128996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 728 - 926
Target Start/End: Original strand, 51691844 - 51692038
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 827  Q
    |||||||||||||  ||||||||| ||||| ||||||||||||   ||||||||||     | ||||||| ||||||||| ||||||||||||||||       
T  51691844 cgttcctacgaatccggaggctcggctctgcaagtgaaaagaggctcgtaataaaa-----atgtattttttttaaaagagcaatgttctatttaaattt 51691938  T
Q  828 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaata--tgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaa 925  Q
        ||||||||||||||| ||| |||||||||||| |||||| ||| |  |||||||||||||| |||||| || || ||| |||||||||||| ||||    
T  51691939 ttt-aaaagataaatacaaggtgccgtatatatgcggtacaccaaaaaaagtgaaaatcactaccatatacacgatgaacctcaaaccaccctccgaaaa 51692037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 724 - 824
Target Start/End: Original strand, 30507039 - 30507142
Alignment:
Q  724 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta---ttttatttaaaagaacaatgttctatt 820  Q
    |||||||||||||||||  |||||||||| | |||||||||||||||| || |||||||||||||| |||   |||| ||||||||||||||||||||||    
T  30507039 gggtcgttcctacgaatccggaggctcgattttgtaagtgaaaagagacccataataaaataaaaatgtatttttttttttaaaagaacaatgttctatt 30507138  T
Q  821 taaa 824  Q
    ||||    
T  30507139 taaa 30507142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 732 - 898
Target Start/End: Complemental strand, 32128764 - 32128598
Alignment:
Q  732 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctatttaaannnnnn 830  Q
    |||| ||||||||||||||| |||||  | |||||| || || || ||||||| |||||||||||| ||| |||||| |||||||||||||| |          
T  32128764 cctaagaatttggaggctcggctctgggaatgaaaaaaggtcagtgataaaatcaaaacgtatttttttttaaaagagcaatgttctatttatatttttt 32128665  T
Q  831 naaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacat 898  Q
     |||||||||||| || |||||||||||||||| ||||||||||  ||||||| ||||||||||||||    
T  32128664 -aaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacat 32128598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 737 - 903
Target Start/End: Original strand, 2790674 - 2790839
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 836  Q
    ||||| ||||||||| |||||  | |||||||||| | || ||||||| ||||| | |||| |||||||||||||||||||||||| |       |||||    
T  2790674 gaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacattttttttttaaaagaacaatgttctatttatatttttt-aaaag 2790772  T
Q  837 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||| || ||  |||||||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  2790773 ataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 2790839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 738 - 903
Target Start/End: Original strand, 54083176 - 54083340
Alignment:
Q  738 aatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaaga 837  Q
    |||| ||||||||| |||||  | ||||||||| || || ||||||| |||||||||||| || |||| ||||||| |||||||| |       ||||||    
T  54083176 aattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacgtatttttttaaaaaaaacaatgatctatttatatttttt-aaaaga 54083274  T
Q  838 taaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||| || ||| |||||||||||| |||||||||| || ||||| |||||||||||||||||||    
T  54083275 taaatataaggtgccgtatatatgcggtacacccaaagataaaaatgactaccgtatacatgagga 54083340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 732 - 903
Target Start/End: Complemental strand, 16845200 - 16845030
Alignment:
Q  732 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnn 831  Q
    |||| ||||| ||||||||| ||||| || |||||| ||  | || ||||||| |||||||||||| ||||||||| |||||||||||||| |           
T  16845200 cctaagaattcggaggctcggctctggaaatgaaaaaagc-cagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatattttttt 16845102  T
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||||| || ||||||||||||||   |||||||||   ||||||| |||||||||||||||||||    
T  16845101 aaaagataaatataaggtgtcgtatatatgtagtacacccaacggtgaaaatgactaccgtatacatgagga 16845030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 732 - 903
Target Start/End: Complemental strand, 34027758 - 34027588
Alignment:
Q  732 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnn 831  Q
    |||| ||||| ||||||||| |||||  | |||||||||  | || ||||||| |||||||||||| || |||| | |||||||||||||| |           
T  34027758 cctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaagcaatgttctatttatatttttt- 34027660  T
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||||| || |||||||||||||||| ||||||||||  ||||||| ||||| |||||||||||||    
T  34027659 aaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactacggtatacatgagga 34027588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 832 - 916
Target Start/End: Original strand, 4167918 - 4168002
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccacc 916  Q
    ||||||||||||||| ||| |||||||||||||||||||||||  |||||||||||||| |||||||||||| ||| ||| ||||    
T  4167918 aaaagataaatacaaggtgccgtatatatgcgatacacccaaaggtgaaaatcactaccttatacatgaggaacctcaaatcacc 4168002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 737 - 903
Target Start/End: Complemental strand, 54780953 - 54780786
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt--aaaagaacaatgttctatttaaannnnnnnaaa 834  Q
    ||||| ||||||| | |||||  | |||||||||  | || ||||||| |||||||||||| |||  |||||| |||||||||||||| |       |||    
T  54780953 gaattcggaggcttggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaagagcaatgttctatttatatttttt-aaa 54780855  T
Q  835 agataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||||| ||| |||||||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  54780854 agataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 54780786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 718 - 926
Target Start/End: Complemental strand, 15735282 - 15735081
Alignment:
Q  718 tcaacggggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttct 817  Q
    ||||| ||| ||||||||| ||| || ||| |||| ||| |||||||||| ||   | || |||||||||||| |||||| ||||| |||||| ||||||    
T  15735282 tcaacagggccgttcctacaaatctgaaggttcgattctttaagtgaaaaaaggctc-tattaaaataaaaacatattttttttaagagaacagtgttct 15735184  T
Q  818 atttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccc 917  Q
    |||||||       |||||||||||||||   |||||||||     ||||||| ||| |||||||||| ||||||||||||||||| | | |||||||||    
T  15735183 atttaaatttttt-aaaagataaatacaagacgtcgtatat-----atacaccaaaaaatgaaaatcattaccgtatacatgaggaacttcaaaccaccc 15735090  T
Q  918 tccaaaaaa 926  Q
    |||||||||    
T  15735089 tccaaaaaa 15735081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 737 - 903
Target Start/End: Original strand, 38209523 - 38209689
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta-ttttatttaaaagaacaatgttctatttaaannnnnnnaaaa 835  Q
    ||||||||||||||| ||||| || |||||||||  | || ||||||| ||||  || |||| ||| ||||| |||||||||||||| |       ||||    
T  38209523 gaatttggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaatataatttttttttaaagagcaatgttctatttatatttttt-aaaa 38209621  T
Q  836 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||||||| ||| |||||||||||| |||||||| |  ||||||| |||||||||||||||||||    
T  38209622 gataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 38209689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 778 - 903
Target Start/End: Complemental strand, 10979036 - 10978909
Alignment:
Q  778 ataaaataaaaacgtattttattt---aaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaa 874  Q
    ||||||| |||||||||||| |||   |||||| |||||||||||||| |       ||||||||||||||| |||||||||||||||| |||||||| |    
T  10979036 ataaaatcaaaacgtatttttttttttaaaagagcaatgttctatttatatttttt-aaaagataaatacaaggtgtcgtatatatgcggtacacccaga 10978938  T
Q  875 tatgaaaatcactaccgtatacatgagga 903  Q
      ||||||| |||||||||||||||||||    
T  10978937 agtgaaaatgactaccgtatacatgagga 10978909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 737 - 903
Target Start/End: Complemental strand, 35465280 - 35465116
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 836  Q
    ||||| |||||||||| ||||  | ||||||||| || || ||||||| ||||| |||||| ||||||||||||||||| |||||| |       | |||    
T  35465280 gaattcggaggctcgattctgggaatgaaaagaggtcagtgataaaatcaaaacatattttttttaaaagaacaatgttatatttata-ttttttacaag 35465182  T
Q  837 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||| || ||| |||||||||||| |||||| |||  ||||||| |||||||||||||||||||    
T  35465181 ataaataaaaggtg-cgtatatatgcggtacacctaaaagtgaaaataactaccgtatacatgagga 35465116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 832 - 908
Target Start/End: Original strand, 35779352 - 35779428
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatcctt 908  Q
    ||||||||||||||| |||||||||||||||| ||||||||||  ||||||| | ||||||||||||||||| ||||    
T  35779352 aaaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaacctt 35779428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 776 - 912
Target Start/End: Original strand, 2135294 - 2135428
Alignment:
Q  776 taataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaat 875  Q
    ||||||||||||||||| |||| ||| ||| |||||| |||||||||||       ||||||||||||||| ||||||||||||||||||||| |||||     
T  2135294 taataaaataaaaacgtttttttttttaaa-aacaatattctatttaaatttttt-aaaagataaatacaaggtgtcgtatatatgcgatacatccaaag 2135391  T
Q  876 atgaaaatcactaccgtatacatgaggatccttaaac 912  Q
     | || ||||||| |||||| ||||||| ||| ||||    
T  2135392 gtaaacatcactatcgtatatatgaggaacctcaaac 2135428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 832 - 926
Target Start/End: Complemental strand, 45656255 - 45656161
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaa 926  Q
    ||||||||||| ||| ||||| ||||||||||||| | |||||| |||||||||| | ||||||||||| || ||| |||||||||||| |||||    
T  45656255 aaaagataaatgcaaggtgtcatatatatgcgataaatccaaatgtgaaaatcacgaacgtatacatgacgaacctcaaaccaccctcccaaaaa 45656161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 34 - 132
Target Start/End: Complemental strand, 46084029 - 46083931
Alignment:
Q  34 aaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgtcc 132  Q
    |||||||||||| ||||||||||||||||| ||||||||||||  |  ||||||| |||||||||| || ||| ||||||| ||||  |||||||||||    
T  46084029 aaatcacataatctagtgtaattatatgtgtcggtgtcgtgtcagtatcggacacgacacgtgtctgacgcggggacacgccttataagaggagtgtcc 46083931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 738 - 903
Target Start/End: Original strand, 37777156 - 37777321
Alignment:
Q  738 aatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaac-aatgttctatttaaannnnnnnaaaag 836  Q
    |||| ||||||||| |||||  | ||||||||| || || ||||||| |||||||||||| |  |||| ||  ||||||||||||| |       |||||    
T  37777156 aattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtattttttaaaaaaaaagtaatgttctatttatatttttt-aaaag 37777254  T
Q  837 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||| || ||| |||||||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  37777255 ataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 37777321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 744 - 901
Target Start/End: Complemental strand, 1105699 - 1105543
Alignment:
Q  744 gaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaata 843  Q
    |||||||| |||||  | ||||||||| || || ||||||| |||||||||||| |||||||||   |||||||||||| |       ||||||||||||    
T  1105699 gaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagtgatgttctatttatatttttt-aaaagataaata 1105601  T
Q  844 caatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgag 901  Q
    ||| || ||||||||||||| |||||| | |  ||||||| |||||| ||||||||||    
T  1105600 caaggtatcgtatatatgcggtacacctagaggtgaaaatgactaccatatacatgag 1105543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 5414216 - 5414105
Alignment:
Q  28 tttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggag 127  Q
    |||| ||||||||| |||  |||||||||||||||  ||||||||||||  || ||||||| |||||||||| |||| | ||||| | |||||| |||||    
T  5414216 tttagaaaatcacaaaatgcagtgtaattatatgtatcggtgtcgtgtcagtgtcggacacgacacgtgtctgacacagggacacaccttatccaaggag 5414117  T
Q  128 tgtccgtacttc 139  Q
    ||||||| ||||    
T  5414116 tgtccgtgcttc 5414105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 832 - 903
Target Start/End: Complemental strand, 13460287 - 13460216
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||||||||||| |||||||||||||||| || ||||| || ||||||| |||||||||||||| ||||    
T  13460287 aaaagataaatacaaggtgtcgtatatatgcggtatacccagatgtgaaaatgactaccgtatacataagga 13460216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 778 - 903
Target Start/End: Original strand, 34768548 - 34768672
Alignment:
Q  778 ataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatat 877  Q
    ||||||| ||||| |||||| ||||||||| |||||||||||||| |       |||||||||||| || ||| |||||||||||| |||||||| |  |    
T  34768548 ataaaatcaaaacatattttttttaaaagagcaatgttctatttatatttttt-aaaagataaatataaggtgccgtatatatgcggtacacccagaggt 34768646  T
Q  878 gaaaatcactaccgtatacatgagga 903  Q
    |||||| | |||||||||||||||||    
T  34768647 gaaaatgattaccgtatacatgagga 34768672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 779 - 901
Target Start/End: Complemental strand, 48209374 - 48209251
Alignment:
Q  779 taaaataaaaacgtattttattt--aaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaata 876  Q
    |||||| |||||||||||| |||  |||||| |||||||||||||| |       ||||||||||||||| ||| |||||||||||| |||||||| ||     
T  48209374 taaaatcaaaacgtattttttttttaaaagagcaatgttctatttatatttttt-aaaagataaatacaaggtgccgtatatatgcggtacacccagatg 48209276  T
Q  877 tgaaaatcactaccgtatacatgag 901  Q
    |||| || |||||||||||||||||    
T  48209275 tgaatatgactaccgtatacatgag 48209251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 728 - 797
Target Start/End: Original strand, 4167846 - 4167915
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtatttt 797  Q
    ||||| |||||||  |||||||||| | |||||||||||||||  |||||||||||||||||||||||||    
T  4167846 cgttcgtacgaatccggaggctcgattttgtaagtgaaaagaggcccgtaataaaataaaaacgtatttt 4167915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 728 - 797
Target Start/End: Original strand, 11906826 - 11906895
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtatttt 797  Q
    |||||||||||||| ||||||||| || | |||||||||||||  ||||||||||||||||| |||||||    
T  11906826 cgttcctacgaattcggaggctcggctatataagtgaaaagaggcccgtaataaaataaaaatgtatttt 11906895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 737 - 872
Target Start/End: Complemental strand, 17679574 - 17679440
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 836  Q
    ||||| |||||||||  ||||  | |||||||||| | || ||||||| |||||||||||| ||||||||| |||| ||||||||| |       |||||    
T  17679574 gaattcggaggctcggttctgggaatgaaaagagaccagtgataaaatcaaaacgtattttttttaaaagagcaatattctatttata-ttttttaaaag 17679476  T
Q  837 ataaatacaatgtgtcgtatatatgcgatacaccca 872  Q
    |||||||||| ||| |||||||||||| ||||||||    
T  17679475 ataaatacaaggtgccgtatatatgcggtacaccca 17679440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 22234955 - 22234864
Alignment:
Q  8 acgccgacacagctacaaaattt--aaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtc 98  Q
    |||||||||| |||| |||||||  |||||||||||||||| ||||||||| |||||| ||||||||||||| || | ||||| |||||||||    
T  22234955 acgccgacaccgcta-aaaatttgaaaaaaatcacataattcagtgtaattctatgtgtcggtgtcgtgtcggtgtctgacacgacacgtgtc 22234864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 778 - 872
Target Start/End: Complemental strand, 51964844 - 51964748
Alignment:
Q  778 ataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnn--aaaagataaatacaatgtgtcgtatatatgcgatacaccca 872  Q
    ||||||| |||||||||||| ||||||||| |||||||||||||| |         ||||||||||||||| ||| |||||||||||||||||||||    
T  51964844 ataaaatcaaaacgtattttttttaaaagagcaatgttctatttatattttttttaaaaagataaatacaaggtgccgtatatatgcgatacaccca 51964748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 728 - 824
Target Start/End: Complemental strand, 24614137 - 24614040
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta--ttttatttaaaagaacaatgttctatttaaa 824  Q
    ||||| ||||||| |||||| ||  ||||||||||||||||||  |||||||||||| |||| |||  |||| ||| ||||||||||||||||||||||    
T  24614137 cgttcttacgaatctggaggttcagctctgtaagtgaaaagaggcccgtaataaaat-aaaatgtatttttttttttaaagaacaatgttctatttaaa 24614040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 832 - 903
Target Start/End: Complemental strand, 40089596 - 40089525
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||||| || ||| |||||||||||| |||| |||||  ||||||| |||||||||||||||||||    
T  40089596 aaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgagga 40089525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 13134470 - 13134532
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgt 95  Q
    ||||||||||||||||||||||||||||||| || ||||||||||| | || |||| ||||||    
T  13134470 aaaatcacataatttagtgtaattatatgtgtcgatgtcgtgtcgacgtcgaacacaacacgt 13134532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 737 - 862
Target Start/End: Original strand, 16922260 - 16922386
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtatttta--tttaaaagaacaatgttctatttaaannnnnnnaaa 834  Q
    |||||||||||||||||| ||  | |||||||||| | || ||||||| ||||||| |||||  ||||||||| |||||||||||||| |       |||    
T  16922260 gaatttggaggctcgactttgggaatgaaaagagaccagtgataaaatcaaaacgttttttatttttaaaagagcaatgttctatttata-ttttttaaa 16922358  T
Q  835 agataaatacaatgtgtcgtatatatgc 862  Q
    ||||||||| || |||||||||||||||    
T  16922359 agataaatataaagtgtcgtatatatgc 16922386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 139
Target Start/End: Complemental strand, 30982917 - 30982811
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgtcc 132  Q
    ||||||||||| || |||||||||||| ||| ||||||||||||| || | ||||| |||||||||  |||| | ||||||| | |||| | ||||||||    
T  30982917 aaaatcacatatttcagtgtaattataagtgtcggtgtcgtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccaaagagtgtcc 30982818  T
Q  133 gtacttc 139  Q
    || ||||    
T  30982817 gtgcttc 30982811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 778 - 903
Target Start/End: Complemental strand, 19498635 - 19498513
Alignment:
Q  778 ataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatat 877  Q
    ||||||| |||||||||||| ||||||||| |||||||||||||| |       |||||||||||| || ||| ||  |||||||| |||| |||||  |    
T  19498635 ataaaatcaaaacgtattttgtttaaaagagcaatgttctatttata-ttttttaaaagataaatataaggtgccg--tatatgcggtacagccaaaggt 19498539  T
Q  878 gaaaatcactaccgtatacatgagga 903  Q
    |||||| ||||| |||||||||||||    
T  19498538 gaaaatgactactgtatacatgagga 19498513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 832 - 900
Target Start/End: Complemental strand, 37514739 - 37514671
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatga 900  Q
    ||||||||||||||| ||| |||||||||||| ||||| || |  ||||||| ||||||||||||||||    
T  37514739 aaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatga 37514671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 832 - 903
Target Start/End: Original strand, 5128869 - 5128940
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||||||||||| ||| |||||||||||  | |||||| |  ||||||| |||||||||||||||||||    
T  5128869 aaaagataaatacaaggtgccgtatatatgcagtgcacccagaggtgaaaatgactaccgtatacatgagga 5128940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 19500899 - 19500836
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacg 94  Q
    |||||| |||||| |||||||||||||||||||  |||||||||||| || ||||||| |||||    
T  19500899 aaaaaaacacatattttagtgtaattatatgtgatggtgtcgtgtcggtgtcggacacgacacg 19500836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 737 - 903
Target Start/End: Complemental strand, 32915560 - 32915394
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacg-tattttatttaaaagaacaatgttctatttaaannnnnnnaaaa 835  Q
    ||||| ||||||||| |||||  | |||||||||  | || ||||||| |||||| | |||| ||||||||| | |||||||||||| |       ||||    
T  32915560 gaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacggttttttttttaaaagagcgatgttctatttatatttttt-aaaa 32915462  T
Q  836 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||||||| ||| |||||||||| | |||||||| |  | ||||| | |||||||||||||||||    
T  32915461 gataaatacaaggtgccgtatatatgtggtacacccagaggtaaaaatgattaccgtatacatgagga 32915394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 5775397 - 5775353
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcg 77  Q
    |||||||||||||| |||||||||||||||| ||||||| |||||    
T  5775397 aaaatcacataattaagtgtaattatatgtgtcggtgtcatgtcg 5775353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 732 - 894
Target Start/End: Original strand, 16882323 - 16882484
Alignment:
Q  732 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnn 831  Q
    |||| ||||| ||||||||| ||||   | ||||||||  || || ||||||| |||||||||||| || |||| |||||||||||||||| |           
T  16882323 cctaagaattcggaggctcggctctaggaatgaaaagaagtcagtgataaaatcaaaacgtatttttttaaaaaaaacaatgttctatttata-cttttt 16882421  T
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtat 894  Q
    |||||||||||| || ||| ||| ||||| || |||||| |||  ||||||| ||||||||||    
T  16882422 aaaagataaatataaggtgccgtgtatatacggtacaccaaaaggtgaaaatgactaccgtat 16882484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 132
Target Start/End: Original strand, 49431074 - 49431134
Alignment:
Q  72 gtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgtcc 132  Q
    |||||| || ||||||| ||||||||| ||||| | ||||||| |||||||||||||||||    
T  49431074 gtgtcggtgtcggacacgacacgtgtccaacaccgggacacgccttatccgaggagtgtcc 49431134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 72
Target Start/End: Complemental strand, 10499309 - 10499270
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    ||||||||||||||||||||||||||||||| | ||||||    
T  10499309 aaaatcacataatttagtgtaattatatgtgtcagtgtcg 10499270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 98
Target Start/End: Original strand, 19312353 - 19312420
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtc 98  Q
    |||||||||||| ||| |||||||||||| ||  ||||||||||||| || |||| || |||||||||    
T  19312353 aaaaaatcacatgattcagtgtaattataagtatcggtgtcgtgtcgttgtcggatacgacacgtgtc 19312420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 32915652 - 32915597
Alignment:
Q  26 aatttaaaaaatcacataatttagtgtaattatatgtgccgg-tgtcgtgtcgatg 80  Q
    ||||||||||||||||||||| | |||||||||||||  ||| |||||||||||||    
T  32915652 aatttaaaaaatcacataattcaatgtaattatatgtttcggttgtcgtgtcgatg 32915597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 71
Target Start/End: Complemental strand, 35158025 - 35157986
Alignment:
Q  32 aaaaatcacataatttagtgtaattatatgtgccggtgtc 71  Q
    |||||||||||||||||||||||||||| ||| |||||||    
T  35158025 aaaaatcacataatttagtgtaattataagtgtcggtgtc 35157986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 11931298 - 11931344
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcg 77  Q
    |||||||||||||||||||||||| |||||||| || |||| |||||    
T  11931298 aaaaaatcacataatttagtgtaaatatatgtgtcgatgtcatgtcg 11931344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 13783304 - 13783342
Alignment:
Q  36 atcacataatttagtgtaattatatgtgccggtgtcgtg 74  Q
    |||||| |||| |||||||||||||||||||||||||||    
T  13783304 atcacaaaattcagtgtaattatatgtgccggtgtcgtg 13783342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 36409558 - 36409512
Alignment:
Q  26 aatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    |||| ||||| ||||||||||||||||||||||| ||| ||||||||    
T  36409558 aattgaaaaagtcacataatttagtgtaattataggtgtcggtgtcg 36409512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 36423724 - 36423678
Alignment:
Q  26 aatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    |||| ||||| ||||||||||||||||||||||| ||| ||||||||    
T  36423724 aattgaaaaagtcacataatttagtgtaattataggtgtcggtgtcg 36423678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 732 - 822
Target Start/End: Original strand, 38352193 - 38352283
Alignment:
Q  732 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctattta 822  Q
    |||| ||||| ||||||||| |||||  | |||||||||||| || ||||||| |||||||||||| ||| ||| |  |||| ||||||||    
T  38352193 cctaagaattcggaggctcggctctgggaatgaaaagagatcagtgataaaatcaaaacgtatttttttttaaaaagtaatgatctattta 38352283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 724 - 822
Target Start/End: Complemental strand, 40089712 - 40089614
Alignment:
Q  724 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctattta 822  Q
    ||||||| |||| ||||| ||||||||| ||||   | ||||||||  || || ||||||| |||||||||||| ||||||| | ||||||| ||||||    
T  40089712 gggtcgtccctaagaattcggaggctcggctcttggaatgaaaagaagtcagtgataaaatcaaaacgtattttttttaaaaaagcaatgttttattta 40089614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 2362036 - 2361975
Alignment:
Q  11 ccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    ||||||||||||  || || ||||||| ||||||||||||||||||| | ||| ||||||||    
T  2362036 ccgacacagctaataatttgaaaaaattacataatttagtgtaattaaaagtgtcggtgtcg 2361975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 5555178 - 5555133
Alignment:
Q  26 aatttaaaaaatcacataatttagtgtaattatatgtgccggtgtc 71  Q
    |||||||||||| | |||||||| |||||||||||||| |||||||    
T  5555178 aatttaaaaaataagataatttaatgtaattatatgtgtcggtgtc 5555133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 72
Target Start/End: Complemental strand, 12895315 - 12895274
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    ||||||||||||||||| ||||||||||| ||| ||||||||    
T  12895315 aaaaaatcacataattttgtgtaattataagtgtcggtgtcg 12895274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 134
Target Start/End: Original strand, 30838238 - 30838331
Alignment:
Q  41 ataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgtccgt 134  Q
    ||||||||||||||||||| ||  ||||||||||||  || ||||| | |||||||||  ||||   ||||||| | | |||||||||||||||    
T  30838238 ataatttagtgtaattataagtatcggtgtcgtgtcagtgtcggacgcgacacgtgtccgacaccaagacacgcctaacccgaggagtgtccgt 30838331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 72
Target Start/End: Complemental strand, 40179677 - 40179636
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    |||||||||||||||| |||||||||||||| | ||||||||    
T  40179677 aaaaaatcacataattcagtgtaattatatgcgtcggtgtcg 40179636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 72
Target Start/End: Complemental strand, 54580064 - 54580023
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    |||||||||||||||| |||||||||||| ||| ||||||||    
T  54580064 aaaaaatcacataattcagtgtaattataagtgtcggtgtcg 54580023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 6e-52; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 724 - 926
Target Start/End: Original strand, 21665622 - 21665822
Alignment:
Q  724 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaa 823  Q
    |||| |||||||||||| |||||| ||| ||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  21665622 gggttgttcctacgaatctggagggtcggctctgtaagtgaaaagagacccgtaataaaataaaaatgtatttt-tttaaaagaacaatgttctatttaa 21665720  T
Q  824 annnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaa 923  Q
    |       ||||||||||||||  |||||||||||||| |||||| | |||| ||||||||||||||||||||||||||| ||  |||||||||||| ||    
T  21665721 a-ttttttaaaagataaatacacggtgtcgtatatatgtgatacatcaaaatgtgaaaatcactaccgtatacatgaggaaccacaaaccaccctcctaa 21665819  T
Q  924 aaa 926  Q
    |||    
T  21665820 aaa 21665822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 725 - 916
Target Start/End: Complemental strand, 16097188 - 16096998
Alignment:
Q  725 ggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaa 824  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |  ||||||||||||||| | ||||||| ||||||||||||||||||||||||||    
T  16097188 ggtcgttcctacgaatttggaggctcggctctgtaagtgaaaagtggcccgtaataaaataaatatgtattttgtttaaaagaacaatgttctatttaaa 16097089  T
Q  825 nnnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccacc 916  Q
           ||||||||||||||| ||| ||||||||||   ||||||||||  ||||||| |||||| |||||||||||| ||| ||||||||    
T  16097088 -ttttttaaaagataaatacaaggtgccgtatatatgatgtacacccaaaggtgaaaattactaccttatacatgaggaacctcaaaccacc 16096998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 738 - 926
Target Start/End: Original strand, 11912691 - 11912879
Alignment:
Q  738 aatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtat-tttatttaaaagaacaatgttctatttaaannnnnnnaaaag 836  Q
    |||| ||||||||| |||| |||||||||||| |||||||||||||||||||| ||| ||| ||| ||||||||||||||||||||||       ||||     
T  11912691 aattcggaggctcggctctataagtgaaaagatatccgtaataaaataaaaacatatattttttttaaagaacaatgttctatttaaatttaaaaaaaa- 11912789  T
Q  837 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaa 926  Q
    |||||||||| ||| ||||||||||| ||||| ||||| ||||||||||||||||||||||| |||| ||| |||||||||||| |||||    
T  11912790 ataaatacaaagtgccgtatatatgcaatacatccaaagatgaaaatcactaccgtatacataaggaacctcaaaccaccctcccaaaaa 11912879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 724 - 926
Target Start/End: Original strand, 24035466 - 24035667
Alignment:
Q  724 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaa 823  Q
    ||||| |||||||||||  ||| |||||| | ||||||||||||||   ||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  24035466 gggtcattcctacgaatccggatgctcgattttgtaagtgaaaagatgcccgtaataaaataaaaacgtatttcttttaaaagaacaatgttctatttaa 24035565  T
Q  824 annnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaa 923  Q
    |       ||||||||||||||| ||| |||||| |||||||||||| |||  ||||||||||||||| |||||||||||  |  |||||||||||| ||    
T  24035566 a-ttttttaaaagataaatacaaggtgccgtataaatgcgatacacctaaaggtgaaaatcactaccgcatacatgaggaatcgcaaaccaccctcccaa 24035664  T
Q  924 aaa 926  Q
    |||    
T  24035665 aaa 24035667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 753 - 919
Target Start/End: Complemental strand, 38400950 - 38400785
Alignment:
Q  753 ctctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtc 852  Q
    ||||||||||||||||||| ||| |||||||||||||| ||| || |||| |||||||||||||||||||||       ||||||||||||||| |||||    
T  38400950 ctctgtaagtgaaaagagacccgcaataaaataaaaacatatattttttataagaacaatgttctatttaaatttttt-aaaagataaatacaaggtgtc 38400852  T
Q  853 gtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctc 919  Q
     |||||||||||||||  ||||  ||||||||||||||||||||||||||| ||| |||||||||||    
T  38400851 atatatatgcgatacattcaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccaccctc 38400785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 728 - 926
Target Start/End: Original strand, 28425632 - 28425832
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt---aaaagaacaatgttctatttaaa 824  Q
    ||||||||||||||  ||||||||  | ||||| ||||||||| |||||||||||||||||| ||||||| |||   |||||||||||||||||||||||    
T  28425632 cgttcctacgaattcagaggctcgtttttgtaaatgaaaagaggtccgtaataaaataaaaatgtatttttttttttaaaagaacaatgttctatttaaa 28425731  T
Q  825 nnnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaa 924  Q
           ||||||||||||||| |||||||||||||||  ||||||||||| |||||||||||||| |||| ||||||| ||| || || |||||| |||    
T  28425732 aatttt-aaaagataaatacaaggtgtcgtatatatgcagtacacccaaatgtgaaaatcactaccatatatatgaggaacctcaagcctccctcccaaa 28425830  T
Q  925 aa 926  Q
    ||    
T  28425831 aa 28425832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 744 - 920
Target Start/End: Original strand, 12133977 - 12134156
Alignment:
Q  744 gaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaa---cgtattttatttaaaa-gaacaatgttctatttaaannnnnnnaaaagata 839  Q
    ||||||||  ||||||||||||||||| ||||||||||||||| ||   |||||||| ||||||| |||||||||||||||||||       ||||||||    
T  12133977 gaggctcggttctgtaagtgaaaagaggtccgtaataaaataataagaacgtattttttttaaaaagaacaatgttctatttaaaaaattt-aaaagata 12134075  T
Q  840 aatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcc 920  Q
    ||||||| ||  |||||||||||||||||||||||  |||||||||||||||||||||| |||| ||| ||||||||||||    
T  12134076 aatacaaggtaccgtatatatgcgatacacccaaaagtgaaaatcactaccgtatacattaggaacctcaaaccaccctcc 12134156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 728 - 926
Target Start/End: Original strand, 13800469 - 13800667
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 827  Q
    |||| ||||||||| | || ||||||||||||||||||||||| | |||||||||||||||| ||||||| || |||||||||||||||||||||||       
T  13800469 cgtttctacgaattcgaagactcgactctgtaagtgaaaagaggttcgtaataaaataaaaatgtatttttttaaaaagaacaatgttctatttaaa-tt 13800567  T
Q  828 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacaccc-aaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaa 926  Q
        |||||||||||| || ||| |||||||||||||||||||| |||  |||||||||||||  |||||| ||||| ||| ||| |||| ||| |||||    
T  13800568 ttttaaaagataaatataaggtgccgtatatatgcgatacacccaaaaggtgaaaatcactactatatacacgaggaacctcaaatcaccttcccaaaaa 13800667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 728 - 926
Target Start/End: Original strand, 16227291 - 16227490
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtat---tttatttaaaagaacaatgttctatttaaa 824  Q
    |||||||||||||| ||||||||   |||||||||||||||||| || ||||||||||||||| |||   ||| ||| |||||||||| |||||||||||    
T  16227291 cgttcctacgaattcggaggctcagttctgtaagtgaaaagaga-ccttaataaaataaaaacatatattttttttttaaagaacaattttctatttaaa 16227389  T
Q  825 nnnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaa 924  Q
           ||||||||||||||| |||||||||||||| |||||||| | | ||||||||||||||  ||||||| |||| ||| |||||||||||| |||    
T  16227390 tttttt-aaaagataaatacaaggtgtcgtatatatgtgatacaccgatagatgaaaatcactactatatacataaggaacctcaaaccaccctcccaaa 16227488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 730 - 824
Target Start/End: Original strand, 22727384 - 22727478
Alignment:
Q  730 ttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaa 824  Q
    |||||||||||| ||||||||||| ||||||||||||||||    ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22727384 ttcctacgaattcggaggctcgacgctgtaagtgaaaagaggcaagtaataaaataaaaacgtattttttttaaaagaacaatgttctatttaaa 22727478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 729 - 925
Target Start/End: Original strand, 7742055 - 7742255
Alignment:
Q  729 gttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt----aaaagaacaatgttctatttaaa 824  Q
    ||||||||||||  ||||| |||  |||||||||||||||||  |||| |||||||||||||  || ||||||    ||||||||||||||||||||| |    
T  7742055 gttcctacgaatccggaggttcggttctgtaagtgaaaagaggcccgtgataaaataaaaacacatattatttttttaaaagaacaatgttctatttata 7742154  T
Q  825 nnnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaa 924  Q
           ||||||||||||||||||||| |||||||||| |||| |||||  ||||||  |||| ||||| |||||||| ||| ||||||| |||| |||    
T  7742155 tttttttaaaagataaatacaatgtgtcatatatatgcgttacatccaaaggtgaaaaatactatcgtatgcatgaggaacctcaaaccactctcccaaa 7742254  T
Q  925 a 925  Q
    |    
T  7742255 a 7742255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 764 - 903
Target Start/End: Original strand, 29939823 - 29939961
Alignment:
Q  764 aaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcg 863  Q
    ||||||| || || ||||||| |||||||||||| ||||||||| |||||||||||||| |       | ||||||||||||| ||||||||||||||||    
T  29939823 aaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatatttttt-acaagataaatacaaggtgtcgtatatatgcg 29939921  T
Q  864 atacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
     ||||||||||  ||||||| |||||||||||||||||||    
T  29939922 gtacacccaaaggtgaaaatgactaccgtatacatgagga 29939961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 28 - 145
Target Start/End: Complemental strand, 34785026 - 34784909
Alignment:
Q  28 tttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggag 127  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||| |  ||||||| |||| ||||| |||||| ||||||| |||| |||||||    
T  34785026 tttagaaaatcacataatttagtgtaattatatgtgtcggtgtcgtgtcggtatcggacacgacacctgtctgacacggggacacgccttattcgaggag 34784927  T
Q  128 tgtccgtacttcgtagat 145  Q
    |||| || |||| |||||    
T  34784926 tgtctgtgcttcatagat 34784909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 778 - 903
Target Start/End: Complemental strand, 9046157 - 9046032
Alignment:
Q  778 ataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatat 877  Q
    ||||||| |||||||||| | |||||||||||||||||||||||| |       |||||||||||| || ||| |||||||||||| ||||||||||  |    
T  9046157 ataaaatcaaaacgtattgtttttaaaagaacaatgttctatttatatttttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggt 9046058  T
Q  878 gaaaatcactaccgtatacatgagga 903  Q
    |||||| |||||||||||||||||||    
T  9046057 gaaaatgactaccgtatacatgagga 9046032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 725 - 812
Target Start/End: Complemental strand, 37182824 - 37182738
Alignment:
Q  725 ggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaat 812  Q
    ||||||||||| ||||  ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  37182824 ggtcgttcctaagaatccggaggctcggctctgtaagtgaaaagagacccgtaataaaataaaaacgtatttt-tttaaaagaacaat 37182738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 837 - 926
Target Start/End: Complemental strand, 37182739 - 37182650
Alignment:
Q  837 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaa 926  Q
    |||||||||| ||||||||||||||| |||||||||||  ||||||||||||||||||||||||||| ||| ||| |||||||| |||||    
T  37182739 ataaatacaaggtgtcgtatatatgcaatacacccaaaagtgaaaatcactaccgtatacatgaggaacctcaaatcaccctcccaaaaa 37182650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 728 - 824
Target Start/End: Original strand, 11952514 - 11952609
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaa 824  Q
    ||||||||||||| || |||||||  |||||||||||||||||| |||||||||||||||||| | |||| ||| ||||||||||||||||||||||    
T  11952514 cgttcctacgaatctgaaggctcggttctgtaagtgaaaagagacccgtaataaaataaaaacat-tttttttttaaagaacaatgttctatttaaa 11952609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 36096439 - 36096308
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggt 107  Q
    ||||||||||||||| |   |||| ||||||||| |||  ||||||||||||| || |||||||||||||||| ||||||| |||||||||| ||||||     
T  36096439 acgccgacacagctaaattttttagaaaatcacaaaatgcagtgtaattatatttgtcggtgtcgtgtcgatgtcggacacgacacgtgtctgacacggg 36096340  T
Q  108 gacacgctttatccgaggagtgtccgtacttc 139  Q
    ||||||| ||| || | |||||||||| ||||    
T  36096339 gacacgccttaaccaaagagtgtccgtgcttc 36096308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 734 - 824
Target Start/End: Original strand, 44914835 - 44914924
Alignment:
Q  734 tacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaa 824  Q
    |||||||| | ||||||  |||||||||||||||||| |||||||||||||||||| ||| ||| ||||||||||||||||||||||||||    
T  44914835 tacgaattcgaaggctcagctctgtaagtgaaaagaggtccgtaataaaataaaaatgtacttt-tttaaaagaacaatgttctatttaaa 44914924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 762 - 903
Target Start/End: Complemental strand, 26716273 - 26716131
Alignment:
Q  762 tgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatat 860  Q
    ||||||||| || || ||||||| |||||||||||| ||| |||||| |||||||||||||| |       |||||||||||| || ||| | |||||||    
T  26716273 tgaaaagaggtcagtgataaaatcaaaacgtatttttttttaaaagagcaatgttctatttatatttttttaaaagataaatataaggtgccatatatat 26716174  T
Q  861 gcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||| ||||||||||  ||||||| |||||||||||||||||||    
T  26716173 gcggtacacccaaaggtgaaaatgactaccgtatacatgagga 26716131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 737 - 903
Target Start/End: Complemental strand, 4506063 - 4505897
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta-ttttatttaaaagaacaatgttctatttaaannnnnnnaaaa 835  Q
    ||||| ||||||||| ||||| || |||||||||  | || ||||||| ||||| || |||| ||||||||| |||||||||||||| |       ||||    
T  4506063 gaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctatttatatttttt-aaaa 4505965  T
Q  836 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||||||| ||| |||||||||||| |||||||| |  | ||||| |||||||||||||||||||    
T  4505964 gataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagga 4505897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 737 - 903
Target Start/End: Complemental strand, 6965174 - 6965010
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 836  Q
    ||||| ||||||||| ||||| || |||||||||  | || ||||||| ||||   ||||| ||||||||| |||||||||||||| |       |||||    
T  6965174 gaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaata-attttttttaaaagagcaatgttctatttatatttttt-aaaag 6965077  T
Q  837 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||| ||| |||||||||||| |||||||| |  ||||||| |||||||||||||||||||    
T  6965076 ataaatacaaagtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 6965010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 41 - 139
Target Start/End: Original strand, 35056896 - 35056994
Alignment:
Q  41 ataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgtccgtacttc 139  Q
    |||||| |||||||||||||||| ||||||||||||| || ||||||| |||||||||  ||||||  |||||| | ||| ||||||||||||| ||||    
T  35056896 ataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtccgacacggaaacacgcctaatctgaggagtgtccgtgcttc 35056994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 737 - 903
Target Start/End: Complemental strand, 3155386 - 3155220
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta-ttttatttaaaagaacaatgttctatttaaannnnnnnaaaa 835  Q
    ||||| ||||||||| || |  || ||||||||| || || ||||||| ||||| || |||| ||||||||| |||||||||||||| |       ||||    
T  3155386 gaattcggaggctcggctttaaaaatgaaaagaggtcagtgataaaattaaaacataattttttttaaaagagcaatgttctatttatatttttt-aaaa 3155288  T
Q  836 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||||||| ||| |||||||||||| |||||| | |  ||||||| |||||||||||||||||||    
T  3155287 gataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgagga 3155220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 842 - 926
Target Start/End: Original strand, 11952644 - 11952728
Alignment:
Q  842 tacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaa 926  Q
    ||||| |||||||||||||| ||||||| || | |||||||||||||| | ||||||||||| ||| |||||||||||| |||||    
T  11952644 tacaaagtgtcgtatatatgtgatacactcatagatgaaaatcactactgcatacatgaggaacctcaaaccaccctcccaaaaa 11952728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 832 - 900
Target Start/End: Original strand, 22727530 - 22727598
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatga 900  Q
    ||||||||||||| ||||| |||||||||||| ||||||||||  |||||||||||||| |||||||||    
T  22727530 aaaagataaatactatgtgacgtatatatgcggtacacccaaaagtgaaaatcactaccatatacatga 22727598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 31 - 139
Target Start/End: Original strand, 37419761 - 37419869
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgt 130  Q
    ||||||||||| |||| |||||||||| | ||||||||||||||||| || ||||||| |  ||||||  |||| | ||||||| | |||||||||||||    
T  37419761 aaaaaatcacaaaattcagtgtaattacaagtgccggtgtcgtgtcggtgtcggacacgatgcgtgtccgacaccgggacacgcctaatccgaggagtgt 37419860  T
Q  131 ccgtacttc 139  Q
    |||| ||||    
T  37419861 ccgtgcttc 37419869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 832 - 903
Target Start/End: Complemental strand, 24410511 - 24410440
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||||| || ||| |||||||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  24410511 aaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 24410440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 725 - 824
Target Start/End: Complemental strand, 42029329 - 42029226
Alignment:
Q  725 ggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattta----aaagaacaatgttctatt 820  Q
    ||||||||||| |||| ||||||||||  | ||||||||||||||| | |||||||| ||||||| ||||||| |||     ||||||||||||||||||    
T  42029329 ggtcgttcctaagaatctggaggctcggttttgtaagtgaaaagaggttcgtaataatataaaaatgtatttttttttttttaaagaacaatgttctatt 42029230  T
Q  821 taaa 824  Q
    ||||    
T  42029229 taaa 42029226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 724 - 903
Target Start/End: Complemental strand, 3953186 - 3953009
Alignment:
Q  724 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaa 823  Q
    ||||||| |||  ||||||||||||||| || || || ||||||||| || || ||||||| |||| ||||||| |||||| || | ||||||||||||     
T  3953186 gggtcgtccctgagaatttggaggctcggctttggaaatgaaaagaggtcagtgataaaatcaaaatgtattttttttaaa-gaccgatgttctatttat 3953088  T
Q  824 annnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |       ||||||||||||||| ||| |||||| ||||| |||||||| |  ||||||| | |||||||| ||||||||    
T  3953087 atttttt-aaaagataaatacaaggtgccgtatacatgcggtacacccagaggtgaaaatgattaccgtatgcatgagga 3953009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 732 - 903
Target Start/End: Original strand, 10762495 - 10762664
Alignment:
Q  732 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnn 831  Q
    |||| ||||||||||||||  |||||  | |||||||||  | || ||||||| ||||||| |||| |||||| || |||||||||||||| |           
T  10762495 cctaagaatttggaggctcagctctgggaatgaaaagaggccagtgataaaattaaaacgttttttttttaaa-gagcaatgttctatttatatttttt- 10762592  T
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||||| || |||  ||||||||| | ||||||||||  ||||||| |||||||||||||||||||    
T  10762593 aaaagataaatataaggtgcggtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgagga 10762664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 737 - 872
Target Start/End: Complemental strand, 34694143 - 34694009
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 836  Q
    ||||| ||||| |||  |||| || |||||||||  |||| ||||||| |||||||||||| ||||||||| |||||||||||||| |       |||||    
T  34694143 gaattcggaggttcggatctggaaatgaaaagaggcccgtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttata-ttttttaaaag 34694045  T
Q  837 ataaatacaatgtgtcgtatatatgcgatacaccca 872  Q
    |||||||||| ||| |||||||||| | ||||||||    
T  34694044 ataaatacaaggtgccgtatatatgtggtacaccca 34694009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 737 - 872
Target Start/End: Complemental strand, 34716555 - 34716421
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 836  Q
    ||||| ||||| |||  |||| || |||||||||  |||| ||||||| |||||||||||| ||||||||| |||||||||||||| |       |||||    
T  34716555 gaattcggaggttcggatctggaaatgaaaagaggcccgtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttata-ttttttaaaag 34716457  T
Q  837 ataaatacaatgtgtcgtatatatgcgatacaccca 872  Q
    |||||||||| ||| |||||||||| | ||||||||    
T  34716456 ataaatacaaggtgccgtatatatgtggtacaccca 34716421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 737 - 872
Target Start/End: Complemental strand, 40636306 - 40636172
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 836  Q
    ||||| ||||||||  |||||  | |||||||||  | || ||||||| ||||| |||||| ||||||||| |||||||||||||| |       |||||    
T  40636306 gaattcggaggctcagctctgggaatgaaaagaggccagtgataaaatcaaaacatattttttttaaaagagcaatgttctatttatatttttt-aaaag 40636208  T
Q  837 ataaatacaatgtgtcgtatatatgcgatacaccca 872  Q
    |||||||||| |||||||||||||||| ||||||||    
T  40636207 ataaatacaaggtgtcgtatatatgcggtacaccca 40636172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 734 - 926
Target Start/End: Complemental strand, 10252587 - 10252388
Alignment:
Q  734 tacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaa 833  Q
    |||||||  ||||||||| | | ||||||||||||||    |||||||||||||||| |||||| ||| |||||| ||||||| |||||||       ||    
T  10252587 tacgaatcaggaggctcggcacggtaagtgaaaagaggcgtgtaataaaataaaaacatatttttttttaaagaaaaatgttcaatttaaa-ttttttaa 10252489  T
Q  834 aagataaatacaatgt---gtcgtatatatgcgatacacccaaatatgaaaatcac-----taccgtatacatgaggatccttaaaccaccctccaaaaa 925  Q
    ||||||||||||| ||   ||||||||||| | | |||||||||  |||||| |||     || | |||||||||||| ||| |||||||||||||||||    
T  10252488 aagataaatacaaggtgtcgtcgtatatatactacacacccaaaggtgaaaaccactatcatatcatatacatgaggaacctcaaaccaccctccaaaaa 10252389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 729 - 789
Target Start/End: Complemental strand, 12694855 - 12694795
Alignment:
Q  729 gttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaa 789  Q
    |||| |||||||  ||||||||| ||||||||||||||||||| |||||||||||||||||    
T  12694855 gttcttacgaatccggaggctcggctctgtaagtgaaaagagacccgtaataaaataaaaa 12694795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 832 - 903
Target Start/End: Original strand, 12337476 - 12337547
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||||||||||| ||||| |||||||| | |||||||| |  ||||||| |||||||||||||||||||    
T  12337476 aaaagataaatacaaggtgtcatatatatgtggtacacccagaggtgaaaatgactaccgtatacatgagga 12337547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 728 - 901
Target Start/End: Original strand, 8907002 - 8907176
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta--ttttatttaaaagaacaatgttctatttaaan 825  Q
    |||||||  ||||| ||||||||| ||||| || |||||||||  | || ||||||| ||||| ||  |||| |||||||||  ||||||||||||| |     
T  8907002 cgttcctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacataatttttttttaaaagagtaatgttctatttatat 8907101  T
Q  826 nnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgag 901  Q
          ||||||||||||||| | | |||||||||||| |||||||| |  | ||||| |||||||||||||||||    
T  8907102 ttttt-aaaagataaatacaaggcgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgag 8907176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 26769506 - 26769644
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggt 107  Q
    ||||||||||| |||  || || |||| ||||||| || | ||||||||| | ||| ||||||| ||||| |  ||||||| |||||||||  |||| |     
T  26769506 acgccgacacaactaataatttgaaaatatcacattatctggtgtaattacaagtgtcggtgtcatgtcggtatcggacacgacacgtgtccgacactgg 26769605  T
Q  108 gacacgctttatccgaggagtgtccgtacttcgtagatg 146  Q
    ||||||| | ||||||||||||||||| |||| ||||||    
T  26769606 gacacgcctaatccgaggagtgtccgtgcttcatagatg 26769644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 144
Target Start/End: Original strand, 24009343 - 24009415
Alignment:
Q  72 gtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgtccgtacttcgtaga 144  Q
    |||||| || ||||||| |||||||||| |||||| ||||||| |||||| |||||||||||| |||| ||||    
T  24009343 gtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcataga 24009415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 139
Target Start/End: Complemental strand, 30717571 - 30717463
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgt 130  Q
    |||||||||||||||| |||||||||| | ||| || |||||||||| || ||||||| ||||||||   |||| | || |||| | |||| ||||||||    
T  30717571 aaaaaatcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacgtgttcgacactgggatacgcctaatccaaggagtgt 30717472  T
Q  131 ccgtacttc 139  Q
    |||| ||||    
T  30717471 ccgtgcttc 30717463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 737 - 822
Target Start/End: Original strand, 1396632 - 1396718
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgt-attttatttaaaagaacaatgttctattta 822  Q
    ||||| ||||||||||||||| || |||||||||  | || ||||||| ||||| | ||||| ||||||||| ||||||||||||||    
T  1396632 gaattcggaggctcgactctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctattta 1396718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 104
Target Start/End: Original strand, 28524447 - 28524517
Alignment:
Q  34 aaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacac 104  Q
    ||||||||||||| |||||||||||||||| || ||| |||| | || ||||||| |||||||||| ||||    
T  28524447 aaatcacataattcagtgtaattatatgtgtcgttgttgtgttggtgtcggacacaacacgtgtctgacac 28524517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 131
Target Start/End: Original strand, 41843462 - 41843553
Alignment:
Q  34 aaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgtc 131  Q
    |||||||||||||  || |||||||||||| |||||| ||||||      ||| | |||||||||  |||||| ||||||||||||||||||||||||    
T  41843462 aaatcacataattcggtataattatatgtgtcggtgttgtgtcg------gacgcgacacgtgtccgacacggggacacgctttatccgaggagtgtc 41843553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 144
Target Start/End: Complemental strand, 11223904 - 11223792
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgt 130  Q
    ||||||| |||||||| |||||||||| | ||| ||||||| ||| | || ||||||| |||| ||||| |||| | ||||||| | ||| |||||||||    
T  11223904 aaaaaataacataattcagtgtaattacaagtgtcggtgtcatgtaggtgtcggacacgacac-tgtctgacaccgggacacgcctaatctgaggagtgt 11223806  T
Q  131 ccgtacttcgtaga 144  Q
    |||| |||| ||||    
T  11223805 ccgtgcttcataga 11223792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 732 - 903
Target Start/End: Original strand, 27506669 - 27506839
Alignment:
Q  732 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnn 831  Q
    |||| ||||| ||||||||| |||||  | |||||||||  | || ||||||| |||||||||||| |  |||| | ||||| |||||||| |           
T  27506669 cctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtattttttaaaaaaaagcaatgatctatttatatttttt- 27506767  T
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||||| || ||| |||||||||| | ||||||||||  | ||||| ||||| |||||||||||||    
T  27506768 aaaagataaatataaggtgccgtatatatgtggtacacccaaaggtaaaaatgactactgtatacatgagga 27506839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 32749864 - 32749751
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgtcc 132  Q
    |||||||||||||| |||||||| ||| ||| | |||||||||||||| |||||   ||| |||||  |||| | ||||||| |||||  ||||||||||    
T  32749864 aaaatcacataattcagtgtaataataagtgtcagtgtcgtgtcgatgtcggacgtgacatgtgtccgacactgggacacgccttatctaaggagtgtcc 32749765  T
Q  133 gtacttcgtagatg 146  Q
    |  |||| ||||||    
T  32749764 gcgcttcatagatg 32749751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 724 - 789
Target Start/End: Original strand, 37622276 - 37622341
Alignment:
Q  724 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaa 789  Q
    |||||||||| || ||||||||||||||||  |||||||||||| || |  |||||||||||||||    
T  37622276 gggtcgttccaacaaatttggaggctcgacattgtaagtgaaaaaaggtatgtaataaaataaaaa 37622341  T

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Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 762 - 822
Target Start/End: Complemental strand, 8327761 - 8327701
Alignment:
Q  762 tgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctattta 822  Q
    |||||||||||| || ||||||| |||||||||||| ||||||| | ||||| ||||||||    
T  8327761 tgaaaagagatcagtgataaaatcaaaacgtattttttttaaaaaagcaatgatctattta 8327701  T

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Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 132
Target Start/End: Original strand, 15657883 - 15657983
Alignment:
Q  32 aaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgtc 131  Q
    ||||||||||||||| |||||||||| |  || ||||||||||| |||| ||||| | |||||||||  || | | ||||||| |  |||||||||||||    
T  15657883 aaaaatcacataattcagtgtaattacaaatgtcggtgtcgtgttgatgtcggacgcgacacgtgtccgacgccgggacacgcctagtccgaggagtgtc 15657982  T
Q  132 c 132  Q
    |    
T  15657983 c 15657983  T

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Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 20242771 - 20242727
Alignment:
Q  28 tttaaaaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    |||| |||||||||||||| |||||||||||||||| ||||||||    
T  20242771 tttagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 20242727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 20922972 - 20922928
Alignment:
Q  28 tttaaaaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    |||| ||||||||||||||||||||||||||||||| | ||||||    
T  20922972 tttagaaaatcacataatttagtgtaattatatgtgtctgtgtcg 20922928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 30527634 - 30527590
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcg 77  Q
    ||||||| ||||||||||||||||||||||| |||| ||||||||    
T  30527634 aaaatcatataatttagtgtaattatatgtgtcggtatcgtgtcg 30527590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 2665932 - 2665897
Alignment:
Q  28 tttaaaaaatcacataatttagtgtaattatatgtg 63  Q
    |||| |||||||||||||||||||||||||||||||    
T  2665932 tttagaaaatcacataatttagtgtaattatatgtg 2665897  T

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Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 832 - 903
Target Start/End: Complemental strand, 7162858 - 7162787
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||||||||||| ||| |||||||||||| || || || |  ||||||| ||||||||||| |||||||    
T  7162858 aaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatatatgagga 7162787  T

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Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 28677903 - 28677958
Alignment:
Q  7 aacgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgt 62  Q
    ||||||||||| ||||  || || |||||||||||||||| |||||||||||||||    
T  28677903 aacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgt 28677958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 845 - 888
Target Start/End: Complemental strand, 29694440 - 29694397
Alignment:
Q  845 aatgtgtcgtatatatgcgatacacccaaatatgaaaatcacta 888  Q
    ||||||| ||||||| ||||||||||||||| ||||||||||||    
T  29694440 aatgtgttgtatatacgcgatacacccaaatgtgaaaatcacta 29694397  T

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Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 4207875 - 4207940
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgt 97  Q
    |||||| | ||||||||||||||||||||| || |||| |||||||| || ||||||| ||||||||    
T  4207875 aaaaaagcgcataatttagtgtaattatat-tgtcggtatcgtgtcggtgtcggacacgacacgtgt 4207940  T

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Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 5367213 - 5367251
Alignment:
Q  34 aaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    ||||||||||||| |||||||||||||||| ||||||||    
T  5367213 aaatcacataattcagtgtaattatatgtgtcggtgtcg 5367251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 12668464 - 12668418
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcg 77  Q
    ||||||| |||||||| |||||||||||| ||| |||||||||||||    
T  12668464 aaaaaatgacataattcagtgtaattataagtgtcggtgtcgtgtcg 12668418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 20539734 - 20539672
Alignment:
Q  12 cgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtg 74  Q
    |||||||||||  || || ||||||||| ||||||||||||||||| | ||| ||||||||||    
T  20539734 cgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcgtg 20539672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 104
Target Start/End: Complemental strand, 22084871 - 22084798
Alignment:
Q  33 aaaatcacataatttagtgtaatt--atatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacac 104  Q
    ||||||| |||||| |||||||||  |||||||||||| |||||||  || ||||||| |||||||||| ||||    
T  22084871 aaaatcatataattcagtgtaattttatatgtgccggtatcgtgtcagtgtcggacacaacacgtgtctgacac 22084798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 75
Target Start/End: Original strand, 44860340 - 44860382
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgt 75  Q
    |||||| ||||||| |||||||||||||||| |||||||||||    
T  44860340 aaaatcgcataattcagtgtaattatatgtgtcggtgtcgtgt 44860382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 9e-48; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 728 - 918
Target Start/End: Original strand, 10925878 - 10926067
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 827  Q
    ||||||||| ||||||||||||||||||| ||||||||||||   |||||||||||||||||| |||||| |||||||||||||| ||||||||||        
T  10925878 cgttcctacaaatttggaggctcgactctctaagtgaaaagaagcccgtaataaaataaaaacttatttt-tttaaaagaacaatattctatttaagtat 10925976  T
Q  828 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccct 918  Q
        |||| |||||||||||||| |||||||||| ||| || ||||| |||||||||||||||||||||||||||||||| ||| ||||||    
T  10925977 ttttaaaaaataaatacaatgtgccgtatatatgagatgcatccaaagatgaaaatcactaccgtatacatgaggatcctcaaatcaccct 10926067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 728 - 926
Target Start/End: Original strand, 39134644 - 39134844
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt--aaaagaacaatgttctatttaaan 825  Q
    |||||||||||||  ||||||||| ||| |||||||||||||||  |||||||||||||||||||||||| |||  |||||||||||||||||||||||     
T  39134644 cgttcctacgaatccggaggctcggctccgtaagtgaaaagagactcgtaataaaataaaaacgtattttttttttaaaagaacaatgttctatttaaat 39134743  T
Q  826 nnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaa 925  Q
          ||||||||||||||| |||  |||||||||| |||||||||||  ||| ||||||||| ||||||||||||| ||| |||||||||||| ||||    
T  39134744 tttttaaaaagataaatacaaggtgctgtatatatgcaatacacccaaaggtgataatcactactgtatacatgaggaacctcaaaccaccctcccaaaa 39134843  T
Q  926 a 926  Q
    |    
T  39134844 a 39134844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 728 - 926
Target Start/End: Original strand, 38546960 - 38547157
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 827  Q
    |||||||||||||||||||| ||| ||||| |||||||||| |  ||||||||||||||||| | ||||| ||| ||||| ||||||||||||||||       
T  38546960 cgttcctacgaatttggaggatcggctctgcaagtgaaaaggggcccgtaataaaataaaaaggaatttttttttaaagatcaatgttctatttaaattt 38547059  T
Q  828 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaa 926  Q
        ||||||||||||||| ||| |||||||||| | ||||||||||| |||||||||||| | |||||||||||| ||| |||||||||||| |||||    
T  38547060 ttt-aaaagataaatacaaggtgccgtatatatgtggtacacccaaatgtgaaaatcactatcatatacatgaggaacctcaaaccaccctcccaaaaa 38547157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 728 - 926
Target Start/End: Complemental strand, 45758685 - 45758486
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacg--tattttatttaaaagaacaatgttctatttaaan 825  Q
    |||||||||||||   |||||||| |||||||||||||||||| |||| ||||||||||||| |  |||||| ||||||||||||||||||||||||||     
T  45758685 cgttcctacgaatccagaggctcggctctgtaagtgaaaagaggtccgaaataaaataaaaatgtatattttttttaaaagaacaatgttctatttaaa- 45758587  T
Q  826 nnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaa 925  Q
          ||||||||||| ||| |||| |||||||||  ||||| |||||  ||||||||||||||||||||||||||| ||| |||||||| ||| ||||    
T  45758586 ttttttaaaagataaatgcaaggtgttgtatatatgttatacatccaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccaccatcccaaaa 45758487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 728 - 926
Target Start/End: Complemental strand, 5533501 - 5533304
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 827  Q
    |||| ||||||||  ||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||| |||||||||||       
T  5533501 cgtttctacgaatccggaggcttgactctgtaagtgaaaagagacccgtaataaaataaaaatgtatttt-tttaaaagaacaatattctatttaaattt 5533403  T
Q  828 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaa 926  Q
        |||||||||| |||| ||| ||||||||||   ||||  ||||  |||||||||||||||||||||||||||  || |||||||| ||| |||||    
T  5533402 ttttaaaagataaacacaaggtgccgtatatatgatgtacaatcaaaggtgaaaatcactaccgtatacatgaggaaactcaaaccaccatcccaaaaa 5533304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 728 - 928
Target Start/End: Complemental strand, 6221865 - 6221668
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 827  Q
    |||| |||||||| ||||| ||||  ||||||| |||||||||| |||||||||||||||||  |||||| ||| ||||||||||||||||||||||       
T  6221865 cgtttctacgaatctggagactcggttctgtaaatgaaaagagacccgtaataaaataaaaatttatttt-ttttaaagaacaatgttctatttaaa--t 6221769  T
Q  828 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaac 927  Q
        ||||||||||||||||||| |||||||| ||| |||| | |||| ||||||||| || |||||| ||||||| ||| |||||||||| | ||||||    
T  6221768 ttttaaaagataaatacaatgtgccgtatataagcggtacatcaaaatgtgaaaatcattatcgtatatatgaggaacctcaaaccacccttccaaaaac 6221669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 724 - 926
Target Start/End: Complemental strand, 26804135 - 26803940
Alignment:
Q  724 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaa 823  Q
    ||||||||||||  ||| ||||| || || ||||||| ||||||||| ||||||||||||| |||||||||||| ||  ||||||||||| | |||||||    
T  26804135 gggtcgttcctataaatctggagacttgattctgtaa-tgaaaagaggtccgtaataaaatgaaaacgtattttttt--aaagaacaatgctatatttaa 26804039  T
Q  824 annnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaa 923  Q
    |       |||||||||||||||  |||||||||||||||||||||   ||  ||||||||||||||||||||||||| | ||| |||||||||||| ||    
T  26804038 atttttt-aaaagataaatacaagatgtcgtatatatgcgatacac---aaggtgaaaatcactaccgtatacatgagaaacctcaaaccaccctcccaa 26803943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 726 - 926
Target Start/End: Original strand, 43235690 - 43235891
Alignment:
Q  726 gtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaan 825  Q
    |||||||||||||||  | |  ||||||| |||||||||||||||  | ||||||||||||||| ||||||| ||  |||||| |||||||||||||||     
T  43235690 gtcgttcctacgaatccgaatactcgactttgtaagtgaaaagaggcctgtaataaaataaaaatgtatttttttctaaagaaaaatgttctatttaaat 43235789  T
Q  826 nnnnnna-aaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaa 924  Q
            ||||||||||||||  |||||||||||||   ||||||||||  |||||||||||| |||||||||||||| ||| |||||||| ||| |||    
T  43235790 ttttttttaaagataaatacaagatgtcgtatatatgatgtacacccaaaggtgaaaatcactatcgtatacatgaggaacctcaaaccaccatcccaaa 43235889  T
Q  925 aa 926  Q
    ||    
T  43235890 aa 43235891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 737 - 903
Target Start/End: Complemental strand, 5316860 - 5316695
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 836  Q
    |||||||||||||||||  |   | ||||||||| || || ||||||| |||||||||||| ||||||||| |||||||||||||| |       |||||    
T  5316860 gaatttggaggctcgaccttaggaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatatttttt-aaaag 5316762  T
Q  837 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||| ||| |||||||||||| |||||||| |  ||||||| |||||||||||||||||||    
T  5316761 ataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 5316695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 737 - 903
Target Start/End: Complemental strand, 44655921 - 44655756
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 836  Q
    ||||| ||||||||| ||||| || |||||||||| | || ||||||| ||||| || ||| ||||||||| |||||||||||||| |       |||||    
T  44655921 gaattcggaggctcggctctggaaatgaaaagagaccagtgataaaatcaaaacataatttttttaaaagagcaatgttctatttatatttttt-aaaag 44655823  T
Q  837 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||| |||||||||||||||| |||||||| |  | ||||| |||||||||||||||||||    
T  44655822 ataaatacaaggtgtcgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagga 44655756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 732 - 903
Target Start/End: Complemental strand, 17169141 - 17168971
Alignment:
Q  732 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnn 831  Q
    |||| ||||| ||||||||| ||||| || ||||||||| || || ||||||| |||||||||||| || |||| | |||||||||||||| |           
T  17169141 cctaagaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaacgtatttttttaaaaaaagcaatgttctatttatatttttt- 17169043  T
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||||| || |||| ||||||||||| ||||||||||  ||||||| |||||| ||||||||||||    
T  17169042 aaaagataaatataaggtgttgtatatatgcggtacacccaaaggtgaaaatgactaccatatacatgagga 17168971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 737 - 903
Target Start/End: Complemental strand, 14146480 - 14146315
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 836  Q
    ||||| ||||||||| ||||   | |||||||||  | || ||||||| |||||||||||| ||||||||| | |||||||||||| |       |||||    
T  14146480 gaattcggaggctcggctcttggaatgaaaagaggccagtgataaaatcaaaacgtattttttttaaaagagcgatgttctatttatatttttt-aaaag 14146382  T
Q  837 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||| ||| |||||||||||| |||||||| | |||||||| |||||||||||||||||||    
T  14146381 ataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgagga 14146315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 778 - 903
Target Start/End: Complemental strand, 23185566 - 23185442
Alignment:
Q  778 ataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatat 877  Q
    ||||||| |||||||||||| ||||||||| |||||||||||||| |       ||||||||||||||| ||| |||||||||||| |||||||| |  |    
T  23185566 ataaaatcaaaacgtattttttttaaaagagcaatgttctatttatatttttt-aaaagataaatacaaggtgccgtatatatgcggtacacccataggt 23185468  T
Q  878 gaaaatcactaccgtatacatgagga 903  Q
    |||||| |||||||||||||||||||    
T  23185467 gaaaatgactaccgtatacatgagga 23185442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 838 - 926
Target Start/End: Complemental strand, 33170839 - 33170751
Alignment:
Q  838 taaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaa 926  Q
    |||||||||||||| ||||||||||| |||||| ||   ||||||||||||||||||||||||| | |||||||||||||||| |||||    
T  33170839 taaatacaatgtgttgtatatatgcggtacaccaaatggtgaaaatcactaccgtatacatgagaaaccttaaaccaccctcctaaaaa 33170751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 25934611 - 25934742
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggt 107  Q
    ||||||||||||||| |   | || ||||||||| |||  |||||||||||||||| |||| |||||||| || ||||||| |||||||||| ||||||     
T  25934611 acgccgacacagctaaattttctagaaaatcacaaaatacagtgtaattatatgtgtcggtatcgtgtcggtgtcggacacgacacgtgtctgacacggg 25934710  T
Q  108 gacacgctttatccgaggagtgtccgtacttc 139  Q
    || |||| |||||| |||||||||||| ||||    
T  25934711 gatacgccttatccaaggagtgtccgtgcttc 25934742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 31 - 145
Target Start/End: Original strand, 5944301 - 5944415
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgt 130  Q
    |||||||||||||||| |||||||||||| ||| |||||||||||||||| ||||||| |||| ||||  |||| | || |||| | |||||||||||||    
T  5944301 aaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcgatgacggacacaacacatgtccgacaccgggatacgcctaatccgaggagtgt 5944400  T
Q  131 ccgtacttcgtagat 145  Q
     ||| |||| |||||    
T  5944401 tcgtgcttcatagat 5944415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 737 - 903
Target Start/End: Complemental strand, 16140235 - 16140070
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 836  Q
    ||||| ||||||||| |||||  | |||||||||  | || ||||||| |||||||||||| |||||||||   |||||||||||| |       |||||    
T  16140235 gaattcggaggctcggctctgggaatgaaaagaggccggtgataaaatcaaaacgtattttttttaaaagagtgatgttctatttatatttttt-aaaag 16140137  T
Q  837 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||| |||| ||||||||||| |||||| | |  ||||||| |||||||||||||||||||    
T  16140136 ataaatacaaggtgttgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgagga 16140070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 31 - 139
Target Start/End: Original strand, 47989515 - 47989623
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgt 130  Q
    |||||||||||||||| |||||||||| | ||| ||||||||||||| || ||||||| |||| ||||| |||  | ||||||| | |||||||||||||    
T  47989515 aaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacatgtctgacatcgggacacgcctaatccgaggagtgt 47989614  T
Q  131 ccgtacttc 139  Q
    |||| ||||    
T  47989615 ccgtgcttc 47989623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 762 - 903
Target Start/End: Original strand, 4971576 - 4971716
Alignment:
Q  762 tgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatg 861  Q
    |||||||||| | || ||||||| ||||| |||||| ||| ||||| |||||||||||||| |       ||||||||||||||| ||  ||||||||||    
T  4971576 tgaaaagagaccagtgataaaatcaaaacatatttttttttaaagagcaatgttctatttatatttttt-aaaagataaatacaaggtaccgtatatatg 4971674  T
Q  862 cgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    || |||||||| |  ||||||| |||||||||||||||||||    
T  4971675 cggtacacccataagtgaaaatgactaccgtatacatgagga 4971716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 832 - 903
Target Start/End: Complemental strand, 27559723 - 27559652
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||||| || |||||||||||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  27559723 aaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 27559652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 762 - 903
Target Start/End: Original strand, 41697095 - 41697235
Alignment:
Q  762 tgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatg 861  Q
    ||||||||| || || ||||||| |||||||||||| ||||||||| | |||||||||||| |       ||||||||||||||| || |||||||||||    
T  41697095 tgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagcgatgttctatttatatttttt-aaaagataaatacaaagtatcgtatatatg 41697193  T
Q  862 cgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |  |||| ||| |  ||||||| |||||||||||||||||||    
T  41697194 cagtacatccagaagtgaaaatgactaccgtatacatgagga 41697235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 724 - 901
Target Start/End: Complemental strand, 38853717 - 38853539
Alignment:
Q  724 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt--aaaagaacaatgttctattt 821  Q
    |||||||| ||||||| |  ||| |||| |||| ||||||||| |||   | |||||||||||||| ||||||| |||  ||||||||| ||||||||||    
T  38853717 gggtcgtttctacgaaatcagagactcggctctataagtgaaatgaggcacataataaaataaaaatgtattttttttttaaaagaacagtgttctattt 38853618  T
Q  822 aaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgag 901  Q
    |||       ||| ||||||||||| ||||||||||||||   || | |||||  |||||||||||||||||||||||||    
T  38853617 aaatttttt-aaatgataaatacaaggtgtcgtatatatgttgtatatccaaaggtgaaaatcactaccgtatacatgag 38853539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 734 - 903
Target Start/End: Complemental strand, 50146479 - 50146311
Alignment:
Q  734 tacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaata-aaaacgtattttatttaaaagaacaatgttctatttaaannnnnnna 832  Q
    |||||||| ||||||||| |||||||| ||||| |||| || | |||||||| |||| ||| ||| ||||||||||||||||||||||||||            
T  50146479 tacgaattcggaggctcggctctgtaaatgaaacgagacccatgataaaataaaaaatgtacttt-tttaaaagaacaatgttctatttaaactttttg- 50146382  T
Q  833 aaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||| ||| ||| ||| |||||| |||| |||||||  | ||||||| |||| ||||||||||||    
T  50146381 aaagataaatgcaaggtgccgtgtatatgtgatagacccaaaggtaaaaatcattaccctatacatgagga 50146311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 733 - 903
Target Start/End: Original strand, 1366808 - 1366976
Alignment:
Q  733 ctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnna 832  Q
    ||||||||||||||||||  |||||  | |||||||||  | || ||||| | ||||| |||||| ||| || || |||||||||||||| |       |    
T  1366808 ctacgaatttggaggctcagctctgggaatgaaaagaggccagtgataaattgaaaacatatttttttttaa-gagcaatgttctatttatatttttt-a 1366905  T
Q  833 aaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||||||| || ||| |||||||||||| |||||||||| |||||||| ||||||||||||| |||||    
T  1366906 aaagataaatataaggtgccgtatatatgcggtacacccaaagatgaaaatgactaccgtatacacgagga 1366976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 737 - 903
Target Start/End: Complemental strand, 50881609 - 50881445
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 836  Q
    ||||| ||||||||| ||||| || |||||||||  | || ||||||| ||||  |||||| ||||||||| |||||||||||||| |       |||||    
T  50881609 gaattcggaggctcggctctggaaatgaaaagaggccagtgataaaattaaaatctatttt-tttaaaagagcaatgttctatttatatttttt-aaaag 50881512  T
Q  837 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||| |||||||||||||||| |||| | | |  ||||||| ||||| |||||||||||||    
T  50881511 ataaatacaaggtgtcgtatatatgcggtacatctagaggtgaaaatgactacagtatacatgagga 50881445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 738 - 903
Target Start/End: Original strand, 51607374 - 51607538
Alignment:
Q  738 aatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaaga 837  Q
    |||| ||||||||| |||||  | ||||||||| || || ||||||| |||||||||||| ||||||| || |||||| |||||| |       ||||||    
T  51607374 aattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtatttt-tttaaaaaaaaaatgttttatttatatttttt-aaaaga 51607471  T
Q  838 taaatacaatgtgtc-gtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||| || ||| | ||||||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  51607472 taaatataaggtggccgtatatatgcggtacacccaaacgtgaaaatgactaccgtatacatgagga 51607538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 737 - 903
Target Start/End: Complemental strand, 5027731 - 5027564
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt--aaaagaacaatgttctatttaaannnnnnnaaa 834  Q
    ||||| ||||||||||||| |  | |||||||||  | || ||||||| |||||||||||| |||  |||||| |||||||||||||| |       |||    
T  5027731 gaattcggaggctcgactcggggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaagagcaatgttctatttatatttttt-aaa 5027633  T
Q  835 agataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||||| ||| |||||||||||| |||||||| |  ||||||| |||||| |||| |||||||    
T  5027632 agataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatagatgagga 5027564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 732 - 900
Target Start/End: Original strand, 40501717 - 40501885
Alignment:
Q  732 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaac-aatgttctatttaaannnnnn 830  Q
    |||| ||||| |||||||||||||||  | ||||||||| || || ||||||| |||||||||||| |  |||| ||  |||| |||||||| |          
T  40501717 cctaagaattcggaggctcgactctgagaatgaaaagaggtcagtgataaaatcaaaacgtattttttaaaaaaaaagtaatgatctatttatatttttt 40501816  T
Q  831 naaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatga 900  Q
     |||||||||||| || |||||||||||||||| ||||||||||  | ||||| ||||||||||||||||    
T  40501817 -aaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatga 40501885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 732 - 903
Target Start/End: Original strand, 9172950 - 9173121
Alignment:
Q  732 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtatttta-tttaaaagaacaatgttctatttaaannnnnn 830  Q
    |||| ||||| ||||||||| |||||  | |||||||||  | || ||||| |||||| |||||||  ||| ||| |||||||||||||||| |          
T  9172950 cctaagaattcggaggctcggctctgggaatgaaaagaggccggtgataaattaaaaatgtatttttgttttaaaaaacaatgttctatttatatttttt 9173049  T
Q  831 naaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
     |||||||||||| || ||| |||||||||||| |||| |||||  ||||||| |||||||||||||||||||    
T  9173050 -aaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgagga 9173121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 732 - 903
Target Start/End: Original strand, 9180932 - 9181103
Alignment:
Q  732 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtatttta-tttaaaagaacaatgttctatttaaannnnnn 830  Q
    |||| ||||| ||||||||| |||||  | |||||||||  | || ||||| |||||| |||||||  ||| ||| |||||||||||||||| |          
T  9180932 cctaagaattcggaggctcggctctgggaatgaaaagaggccggtgataaattaaaaatgtatttttgttttaaaaaacaatgttctatttatatttttt 9181031  T
Q  831 naaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
     |||||||||||| || ||| |||||||||||| |||| |||||  ||||||| |||||||||||||||||||    
T  9181032 -aaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgagga 9181103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 139
Target Start/End: Original strand, 9828064 - 9828170
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgtcc 132  Q
    |||||||||||||| ||||||||| |||||| ||||||||||||  || | ||||| |||||||||  |||| | ||||||  | |||||||||||||||    
T  9828064 aaaatcacataattcagtgtaattttatgtgtcggtgtcgtgtccgtgtcagacacgacacgtgtccgacaccgggacacgtctaatccgaggagtgtcc 9828163  T
Q  133 gtacttc 139  Q
    || ||||    
T  9828164 gtgcttc 9828170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 743 - 893
Target Start/End: Complemental strand, 35392442 - 35392295
Alignment:
Q  743 ggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaat 842  Q
    |||| |||||||||||||||||||| |  ||| ||||||||||||||  | |||| |||||||||| |||||| ||||||||        || |||||||    
T  35392442 ggagactcgactctgtaagtgaaaaaatgtccataataaaataaaaatat-ttttttttaaaagaataatgttttatttaaatttttt--aaggataaat 35392346  T
Q  843 acaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgta 893  Q
    |||| ||| |||||||||||| || | |||||  |||||||||||||||||    
T  35392345 acaaggtgccgtatatatgcggtatatccaaaggtgaaaatcactaccgta 35392295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 1486773 - 1486656
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggt 107  Q
    |||| ||||||||||  || || |||||||||||||||| |||||||||||| ||| |||||||||||      ||||||| |||||||||  |||| |     
T  1486773 acgctgacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgt------cggacacgacacgtgtccgacaccgg 1486680  T
Q  108 gacacgctttatccgaggagtgtc 131  Q
    ||||||| | ||||||||||||||    
T  1486679 gacacgcctaatccgaggagtgtc 1486656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 44482250 - 44482310
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacac 93  Q
    |||||||||||||| |||||||||||||||| ||||||||||||| || ||||||| ||||    
T  44482250 aaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacac 44482310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 832 - 903
Target Start/End: Complemental strand, 6771877 - 6771806
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||||||||||| ||| |||||||||||| |||||||| |  ||||||| ||||||||||||| |||||    
T  6771877 aaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacacgagga 6771806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 139
Target Start/End: Complemental strand, 6415040 - 6414935
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgtcc 132  Q
    |||||||||||||  ||| |||||| ||||| ||||||| | |||||| ||||||| |||||||||| |||| | |||||  || |||||||||||||||    
T  6415040 aaaatcacataatacagtttaattagatgtgtcggtgtcat-tcgatgtcggacacgacacgtgtctgacaccgcgacacatttcatccgaggagtgtcc 6414942  T
Q  133 gtacttc 139  Q
    || ||||    
T  6414941 gtgcttc 6414935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 732 - 903
Target Start/End: Complemental strand, 19955902 - 19955732
Alignment:
Q  732 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnn 831  Q
    |||| ||||| ||||||||| |||||  | |||||||||  | || ||||||| |||||| ||||| ||| ||| | ||||| |||||||| |           
T  19955902 cctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgaatttttttttaaaaagcaatgatctatttatatttttt- 19955804  T
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||||| || ||  |||||||||||| ||||||||||  ||||||| ||||||||||| |||||||    
T  19955803 aaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgagga 19955732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 832 - 897
Target Start/End: Original strand, 21740964 - 21741029
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtataca 897  Q
    ||||||||||||||| ||| ||||||||||||||||||||| |  ||||||| |||||| ||||||    
T  21740964 aaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccatataca 21741029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 34371733 - 34371798
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtc 98  Q
    |||||||||||||| |||||||||||||||| ||||||||||| | || |||| || |||||||||    
T  34371733 aaaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgtcggatacgacacgtgtc 34371798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 39953211 - 39953146
Alignment:
Q  7 aacgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    ||||||||||| ||||  || |||| |||||||||||||||||||||||| |||||| ||||||||    
T  39953211 aacgccgacaccgctaataattttagaaaatcacataatttagtgtaattgtatgtgtcggtgtcg 39953146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 762 - 868
Target Start/End: Complemental strand, 6889765 - 6889661
Alignment:
Q  762 tgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatg 861  Q
    ||||||||| || || ||||||| |||||||||||| ||||||||| |||||||||||||| |       ||||||||||||||| || |||||||||||    
T  6889765 tgaaaagaggtcagtgataaaatcaaaacgtatttt-tttaaaagagcaatgttctatttata-ttttttaaaagataaatacaaagtatcgtatatatg 6889668  T
Q  862 cgataca 868  Q
    || ||||    
T  6889667 cggtaca 6889661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 762 - 868
Target Start/End: Complemental strand, 6891611 - 6891507
Alignment:
Q  762 tgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatg 861  Q
    ||||||||| || || ||||||| |||||||||||| ||||||||| |||||||||||||| |       ||||||||||||||| || |||||||||||    
T  6891611 tgaaaagaggtcagtgataaaatcaaaacgtatttt-tttaaaagagcaatgttctatttata-ttttttaaaagataaatacaaagtatcgtatatatg 6891514  T
Q  862 cgataca 868  Q
    || ||||    
T  6891513 cggtaca 6891507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 139
Target Start/End: Complemental strand, 32461504 - 32461397
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgt 130  Q
    |||||||||||||||||| |||||||| | |||  ||||| |||||| || ||||||| |||||||||| |||| | ||||||| | |||| || |||||    
T  32461504 aaaaaatcacataatttaatgtaattacaagtgttggtgt-gtgtcggtgtcggacacgacacgtgtctgacactgggacacgcctaatccaagaagtgt 32461406  T
Q  131 ccgtacttc 139  Q
    |||| ||||    
T  32461405 ccgtgcttc 32461397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 134
Target Start/End: Original strand, 34315709 - 34315833
Alignment:
Q  10 gccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtga 109  Q
    ||||||||||||| |   |||||||||  ||||||||  ||||||||||||||| |||| |||| ||| || || |||| |||| ||||||| ||| |||    
T  34315709 gccgacacagctaaattttttaaaaaactacataattcggtgtaattatatgtgtcggtatcgtatcggtgtcgaacacgacacatgtctaatacgttga 34315808  T
Q  110 cacgctttatccgaggagtgtccgt 134  Q
    ||||  ||||| ||||||| |||||    
T  34315809 cacgtcttatctgaggagtctccgt 34315833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 40917746 - 40917875
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggt 107  Q
    |||||||||||||||  || || |||||||||||  ||| |||||||||| | ||  ||||||||||||| ||  |||||| |||||||||  |||| |     
T  40917746 acgccgacacagctaataatttgaaaaaatcaca--attaagtgtaattacaagtctcggtgtcgtgtcggtgttggacacgacacgtgtccgacaccgg 40917843  T
Q  108 gacacgctttatccgaggagtgtccgtacttc 139  Q
    ||||||| | ||||||||| ||||||| ||||    
T  40917844 gacacgcctaatccgaggactgtccgtgcttc 40917875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 88
Target Start/End: Original strand, 25361906 - 25361961
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacac 88  Q
    |||||||||||||| |||||||||||||||| | ||||||||||| || |||||||    
T  25361906 aaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggacac 25361961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 75
Target Start/End: Original strand, 25272502 - 25272544
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgt 75  Q
    ||||||||||||||||||||||||||| ||| |||||||||||    
T  25272502 aaaatcacataatttagtgtaattataagtgtcggtgtcgtgt 25272544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 113294 - 113363
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcg 77  Q
    |||||||||||||||  || || |||||||||||||||| |||||||||| | |||  ||||||||||||    
T  113294 acgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgtcg 113363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 737 - 903
Target Start/End: Complemental strand, 3406599 - 3406433
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctatttaaannnnnnnaaaa 835  Q
    ||||||||||||||  ||| |  | ||||||||| || || ||||||| ||||||| |||| ||| |||||| | |||||||||||| |       ||||    
T  3406599 gaatttggaggctcagctcggggaatgaaaagaggtcagtgataaaatgaaaacgtttttttttttaaaagagcgatgttctatttatatttttt-aaaa 3406501  T
Q  836 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||||||| ||| |||||||||||  ||||| |  |  ||||||| |||||||||||||||||||    
T  3406500 gataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgagga 3406433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 737 - 903
Target Start/End: Original strand, 3440221 - 3440387
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctatttaaannnnnnnaaaa 835  Q
    ||||||||||||||  ||| |  | ||||||||| || || ||||||| ||||||| |||| ||| |||||| | |||||||||||| |       ||||    
T  3440221 gaatttggaggctcagctcggggaatgaaaagaggtcagtgataaaatgaaaacgtttttttttttaaaagagcgatgttctatttatatttttt-aaaa 3440319  T
Q  836 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||||||| ||| |||||||||||  ||||| |  |  ||||||| |||||||||||||||||||    
T  3440320 gataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgagga 3440387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 5376564 - 5376484
Alignment:
Q  8 acgccgacacagctacaaaatttaa-aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacac 88  Q
    |||||||||| |||| | ||||||| ||||| |||||||| |||||||||| | ||| |||||||||||||||| |||||||    
T  5376564 acgccgacaccgcta-ataatttaagaaaataacataattcagtgtaattaaaagtgtcggtgtcgtgtcgatgtcggacac 5376484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 6612212 - 6612155
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacac 88  Q
    ||||||| |||||||| |||||||||| | ||| |||||||||||||||| |||||||    
T  6612212 aaaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtcgatgtcggacac 6612155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 9629939 - 9629874
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtc 98  Q
    ||||||| |||||| ||||| |||||| ||| |||||||||||||||| ||||||| |||| ||||    
T  9629939 aaaatcatataattcagtgtgattataagtgtcggtgtcgtgtcgatgtcggacacgacacatgtc 9629874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 14359585 - 14359537
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaatta 57  Q
    ||||||||||||||| | ||||| ||||||||||||||||||||||||||    
T  14359585 acgccgacacagcta-ataatttgaaaaatcacataatttagtgtaatta 14359537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 22515951 - 22515887
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    |||| ||||||||||  || || ||||||||||||||||||||||||||| | ||| ||||||||    
T  22515951 acgcagacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 22515887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 22881680 - 22881616
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    ||||||||||| |||  || || ||||||||||||||||||||||||||| | ||| ||||||||    
T  22881680 acgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 22881616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 30749855 - 30749899
Alignment:
Q  28 tttaaaaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    |||| |||||||||||||| |||||||||||||||| ||||||||    
T  30749855 tttagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 30749899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 30771306 - 30771350
Alignment:
Q  28 tttaaaaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    |||| |||||||||||||| |||||||||||||||| ||||||||    
T  30771306 tttagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 30771350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 34712422 - 34712378
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcg 77  Q
    ||||| ||||||||||||||||||||||||| | |||||||||||    
T  34712422 aaaataacataatttagtgtaattatatgtgtcagtgtcgtgtcg 34712378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 46348447 - 46348383
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    |||||||||||||||  || || ||||||||| ||||||||||||||||| | ||| ||||||||    
T  46348447 acgccgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcg 46348383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 76
Target Start/End: Complemental strand, 7918250 - 7918207
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtc 76  Q
    |||||||||||||| |||||||||||||||| | ||||||||||    
T  7918250 aaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtc 7918207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 70
Target Start/End: Original strand, 13997901 - 13997940
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgt 70  Q
    |||||||||||||||| |||||||||||||||| ||||||    
T  13997901 aaaaaatcacataattcagtgtaattatatgtgtcggtgt 13997940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 72
Target Start/End: Complemental strand, 14332681 - 14332642
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    ||||||||||||||||||||||||||||||  ||||||||    
T  14332681 aaaatcacataatttagtgtaattatatgtctcggtgtcg 14332642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 787 - 822
Target Start/End: Original strand, 17322606 - 17322641
Alignment:
Q  787 aaacgtattttatttaaaagaacaatgttctattta 822  Q
    ||||||||||| ||||||||||||||||||||||||    
T  17322606 aaacgtattttttttaaaagaacaatgttctattta 17322641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 76
Target Start/End: Complemental strand, 20157389 - 20157346
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtc 76  Q
    |||||||||||||| |||||||| ||||||| ||||||||||||    
T  20157389 aaaatcacataattcagtgtaatcatatgtgtcggtgtcgtgtc 20157346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 728 - 787
Target Start/End: Complemental strand, 24988465 - 24988406
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaa 787  Q
    |||||||| ||||||| |||||||||||||||||| |||  ||| || ||||||||||||    
T  24988465 cgttcctatgaatttgaaggctcgactctgtaagtaaaactagacccataataaaataaa 24988406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 131
Target Start/End: Complemental strand, 41597497 - 41597422
Alignment:
Q  56 tatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgtc 131  Q
    ||||||||  ||||| |||||  || ||||||| |||||||||| |||||| || ||||||||||| |||||||||    
T  41597497 tatatgtgttggtgttgtgtccgtgtcggacacgacacgtgtctgacacggggatacgctttatccaaggagtgtc 41597422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 15449278 - 15449216
Alignment:
Q  26 aatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacac 88  Q
    ||||| |||||||||||||||||||||||||| | ||| | ||||||| ||| || |||||||    
T  15449278 aatttgaaaaatcacataatttagtgtaattacaagtgtctgtgtcgtatcggtgtcggacac 15449216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 93
Target Start/End: Complemental strand, 31694751 - 31694689
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacac 93  Q
    |||||||||||||||| ||| |||||| | ||| ||||||||||||| || ||||||| ||||    
T  31694751 aaaaaatcacataattcagtataattacaagtgtcggtgtcgtgtcggtgtcggacacaacac 31694689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 35919317 - 35919271
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcg 77  Q
    |||||||||||||||| |||||||||||| ||| | |||||||||||    
T  35919317 aaaaaatcacataattcagtgtaattataagtgtccgtgtcgtgtcg 35919271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 1864919 - 1864882
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgt 70  Q
    |||||||||||||| |||||||||||||||| ||||||    
T  1864919 aaaatcacataattcagtgtaattatatgtgtcggtgt 1864882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 72
Target Start/End: Complemental strand, 7353534 - 7353493
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    ||||||| |||||||||||||||||||||| || ||||||||    
T  7353534 aaaaaattacataatttagtgtaattatatatgtcggtgtcg 7353493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 139
Target Start/End: Complemental strand, 10577736 - 10577679
Alignment:
Q  82 cggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgtccgtacttc 139  Q
    ||||||| || ||||||| |||||| ||||||| |||||| |||||||||||| ||||    
T  10577736 cggacacgacgcgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttc 10577679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 12713366 - 12713337
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgt 62  Q
    ||||||||||||||||||||||||||||||    
T  12713366 aaaatcacataatttagtgtaattatatgt 12713337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 12717457 - 12717428
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgt 62  Q
    ||||||||||||||||||||||||||||||    
T  12717457 aaaatcacataatttagtgtaattatatgt 12717428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 24577227 - 24577182
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtc 76  Q
    |||||||||||||||| |||||||||| | ||| ||||||||||||    
T  24577227 aaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtc 24577182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 3e-47; HSPs: 73)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 728 - 906
Target Start/End: Original strand, 26718871 - 26719048
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 827  Q
    |||||||| ||||  |||||||||  |||||||||||||||||| ||||||||||||||||||||||||| ||| |||||| |||||||||||||||       
T  26718871 cgttcctatgaatccggaggctcggttctgtaagtgaaaagagacccgtaataaaataaaaacgtatttttttttaaagaataatgttctatttaaa-at 26718969  T
Q  828 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatcc 906  Q
        ||||||||||||||| |||||||||||||||||||||| ||||  ||||||||||||||| ||||||||||||||    
T  26718970 ttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgaggatcc 26719048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 728 - 906
Target Start/End: Original strand, 26988615 - 26988792
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 827  Q
    |||||||| ||||  |||||||||  |||||||||||||||||| ||||||||||||||||||||||||| ||| |||||| |||||||||||||||       
T  26988615 cgttcctatgaatccggaggctcggttctgtaagtgaaaagagacccgtaataaaataaaaacgtatttttttttaaagaataatgttctatttaaa-at 26988713  T
Q  828 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatcc 906  Q
        ||||||||||||||| |||||||||||||||||||||| ||||  ||||||||||||||| ||||||||||||||    
T  26988714 ttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgaggatcc 26988792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 724 - 926
Target Start/End: Original strand, 11242237 - 11242437
Alignment:
Q  724 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaa 823  Q
    |||||||||||| ||||  ||||||||| |||||||||||||||||||  |||||||||||||||||||||| | ||||||||||||||||||||||| |    
T  11242237 gggtcgttcctatgaatccggaggctcggctctgtaagtgaaaagagactcgtaataaaataaaaacgtattct-tttaaaagaacaatgttctattt-a 11242334  T
Q  824 annnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaa 923  Q
    |       |||||||||||||||  ||  ||||||||| |||||| ||||| ||| |||||||||||||||||||||||| ||| |||||||||||| ||    
T  11242335 atttttttaaaagataaatacaaaatgatgtatatatgtgatacaaccaaagatggaaatcactaccgtatacatgaggaacctcaaaccaccctcccaa 11242434  T
Q  924 aaa 926  Q
    |||    
T  11242435 aaa 11242437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 765 - 926
Target Start/End: Original strand, 2024600 - 2024761
Alignment:
Q  765 aaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcg 863  Q
    |||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||       ||| ||||||||||||||| |||||||||| |    
T  2024600 aaagaggtccgtaataaaataaaaacgtatttttttttaaaagaacaatgttctatttaaatttttttaaa-gataaatacaatgtgccgtatatatgtg 2024698  T
Q  864 atacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaa 926  Q
    ||||||||||| ||||||||||||||| |||||||||||||||| |||||| ||||| |||||    
T  2024699 atacacccaaagatgaaaatcactaccatatacatgaggatcctcaaaccatcctcccaaaaa 2024761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 754 - 932
Target Start/End: Original strand, 1366474 - 1366653
Alignment:
Q  754 tctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcg 853  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||       | |||||||||||||  ||| |    
T  1366474 tctgtaagtaaaaagaggtccgtaaaaaaataaaaacgtattttttttaaaagaacaatgttctatttaaa-ttttttataagataaatacaagatgtgg 1366572  T
Q  854 tatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcc--aaaaaacatcca 932  Q
    ||||||||||||||||| |||| ||||||||||||||||||| ||||||| ||| | ||||||||||  ||||||||||||    
T  1366573 tatatatgcgatacacctaaatgtgaaaatcactaccgtatatatgaggaacctcataccaccctcccaaaaaaacatcca 1366653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 731 - 919
Target Start/End: Original strand, 2530823 - 2531009
Alignment:
Q  731 tcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnn 830  Q
    |||||||||| || ||| | | ||||||||||||||||||  ||||||||||||||||| |||||||  ||||||||| ||||||||||||||           
T  2530823 tcctacgaatctgaaggtttggctctgtaagtgaaaagaggcccgtaataaaataaaaatgtatttttcttaaaagaa-aatgttctatttaa-gttttt 2530920  T
Q  831 naaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctc 919  Q
     ||||||||||||||||||||||||||||| || |||| |||||  ||||||||||||| ||||||||||||| ||| |||||||||||    
T  2530921 taaaagataaatacaatgtgtcgtatatatacggtacatccaaaggtgaaaatcactactgtatacatgaggaacctcaaaccaccctc 2531009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 733 - 926
Target Start/End: Complemental strand, 34426076 - 34425884
Alignment:
Q  733 ctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnna 832  Q
    |||||||| || |||||||  |||||||||||||| |||   ||||||||||||||| |||| || ||||||||||||||||||||||| ||       |    
T  34426076 ctacgaatctgaaggctcggttctgtaagtgaaaaaagacatgtaataaaataaaaatgtatcttttttaaaagaacaatgttctatttcaatttttt-a 34425978  T
Q  833 aaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaa 926  Q
    |||||||||||||| ||| |||||||||| |||||||| ||| || ||||||| ||||||||||||||||| ||| |||||||||||| |||||    
T  34425977 aaagataaatacaaggtgccgtatatatgtgatacacctaaagattaaaatcattaccgtatacatgaggaacctcaaaccaccctcccaaaaa 34425884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 724 - 920
Target Start/End: Complemental strand, 2412266 - 2412075
Alignment:
Q  724 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaa 823  Q
    |||| ||| ||||||||| ||||||  | |||||||||||||||||| ||||||||||||||| |     |||| ||| |||||||||||||||||||||    
T  2412266 gggttgtttctacgaattcggaggcaaggctctgtaagtgaaaagaggtccgtaataaaataatat----tttttttttaaagaacaatgttctatttaa 2412171  T
Q  824 annnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcc 920  Q
    |       |||| |||||||||| |||||||||||||||||| || |||||| ||||||||||||| ||||||||||||| ||| ||||||||||||    
T  2412170 attttttaaaaa-ataaatacaaagtgtcgtatatatgcgatgcatccaaatgtgaaaatcactactgtatacatgaggaacctcaaaccaccctcc 2412075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 794 - 926
Target Start/End: Original strand, 14318373 - 14318504
Alignment:
Q  794 ttttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgta 893  Q
    |||| ||| ||||||||||||||||||||||       ||||||||||||||| |||||||||||||| |||||| ||||| ||||||||||||||||||    
T  14318373 tttttttttaaagaacaatgttctatttaaatttttt-aaaagataaatacaaggtgtcgtatatatgtgatacatccaaaaatgaaaatcactaccgta 14318471  T
Q  894 tacatgaggatccttaaaccaccctccaaaaaa 926  Q
    |||||||||| ||| ||||||||||||||||||    
T  14318472 tacatgaggaacctcaaaccaccctccaaaaaa 14318504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 729 - 930
Target Start/End: Original strand, 40794249 - 40794450
Alignment:
Q  729 gttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacg-tattttatttaaaagaacaatgttctatttaaannn 827  Q
    |||| |||||||| ||||||||| ||||||||||||||||||   |||||||||||||||||| | |||| ||||||||||||||||| ||||||||       
T  40794249 gttcatacgaattcggaggctcggctctgtaagtgaaaagaggctcgtaataaaataaaaacgtttttttttttaaaagaacaatgttttatttaaa-tt 40794347  T
Q  828 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaac 927  Q
        |||||| |||||||| | | |||| ||||  |||||||| |||  ||||||||||||||||||||||||| | ||| ||||||||||  |||||||    
T  40794348 ttttaaaagacaaatacaaagagccgtaaatatatgatacaccaaaaggtgaaaatcactaccgtatacatgagaaacctcaaaccaccctaaaaaaaac 40794447  T
Q  928 atc 930  Q
    |||    
T  40794448 atc 40794450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 728 - 926
Target Start/End: Complemental strand, 24395916 - 24395720
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 827  Q
    |||||||||||||  |||||  || |||||||| | |||||| | ||||||||||||||||| ||||||| ||||||| || |||||||||||||||       
T  24395916 cgttcctacgaatccggaggtacggctctgtaaataaaaagaaacccgtaataaaataaaaatgtattttttttaaaa-aataatgttctatttaaattt 24395818  T
Q  828 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaa 926  Q
        ||||||||||||||| |||| |||||||| | ||||| |||||  |||||||||| |||||||| ||||||| | ||||||||||||| ||||||    
T  24395817 ttt-aaaagataaatacaaggtgttgtatatatacaatacatccaaaggtgaaaatcaccaccgtatagatgaggaactttaaaccaccctctaaaaaa 24395720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 794 - 932
Target Start/End: Original strand, 36868864 - 36869003
Alignment:
Q  794 ttttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgta 893  Q
    |||| |||||||||||||||||||||||||        ||||||||||||||| |||||||||||||| | ||||||||||| |||||||||||||||||    
T  36868864 ttttttttaaaagaacaatgttctatttaa-tttttttaaaagataaatacaaggtgtcgtatatatgtggtacacccaaatgtgaaaatcactaccgta 36868962  T
Q  894 tacatgaggatccttaaaccaccct--ccaaaaaacatcca 932  Q
    ||||||||||  || ||||||||||  ||||||||||||||    
T  36868963 tacatgaggaatctcaaaccaccctccccaaaaaacatcca 36869003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 732 - 901
Target Start/End: Original strand, 38869289 - 38869457
Alignment:
Q  732 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnn 831  Q
    |||| ||||| ||||||||| |||||  | ||||||||| || || ||||||| |||||||||||| ||||||||| |||||||||||||| |           
T  38869289 cctaagaattcggaggctcggctctgggaatgaaaagaggtcagttataaaatcaaaacgtattttttttaaaagagcaatgttctatttatatttttt- 38869387  T
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgag 901  Q
    |||||||||||| || |||||||||||||||| ||||||||||  ||||||| |||||||||||||||||    
T  38869388 aaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 38869457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 724 - 903
Target Start/End: Complemental strand, 10407643 - 10407465
Alignment:
Q  724 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaa 823  Q
    ||||||||||||||||| | |||| |||  ||| ||||||||||||| ||| |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  10407643 gggtcgttcctacgaatctagaggttcggttctataagtgaaaagaggtccataataaaataaaaaagtattttttttaaaagaacaatgttctatttaa 10407544  T
Q  824 annnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |       |||||||||| |||| |||||||| |||||   |||| | |||  ||||||| |||||||||| ||||||||    
T  10407543 a-ttttttaaaagataaacacaaggtgtcgtacatatgttgtacatctaaaagtgaaaattactaccgtatgcatgagga 10407465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 758 - 926
Target Start/End: Complemental strand, 10543820 - 10543655
Alignment:
Q  758 taagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtata 857  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||| ||| ||||||| | |||||       |||||||||||| || |||  |||||    
T  10543820 taagtgaaaagagatccgtaataaaataaaaatgtattttttttaaa-gaataatgttccacttaaatttttt-aaaagataaatataaggtgatgtata 10543723  T
Q  858 tatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaa 926  Q
    ||||||||||| |||||  |||||||||||||||||||||| ||||  || |||||||||||| |||||    
T  10543722 tatgcgatacatccaaaggtgaaaatcactaccgtatacat-aggaatctcaaaccaccctcccaaaaa 10543655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 730 - 926
Target Start/End: Complemental strand, 33037958 - 33037761
Alignment:
Q  730 ttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattt--tatttaaaagaacaatgttctatttaaannn 827  Q
    ||||||||||||  |||||||| ||||||||  ||||||||   |||||||||||||||| |||| |  | ||||||||||||||||| ||||||||       
T  33037958 ttcctacgaattcagaggctcggctctgtaaccgaaaagaggctcgtaataaaataaaaatgtatatattttttaaaagaacaatgttttatttaaattt 33037859  T
Q  828 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaa 926  Q
        |||||||||||||||  | |||||||||||   ||||||||||  |||||| || ||||||||||||||||| ||| |||||||| |||||||||    
T  33037858 ttt-aaaagataaatacaagatatcgtatatatgttgtacacccaaaggtgaaaaccattaccgtatacatgaggaacctcaaaccaccatccaaaaaa 33037761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 728 - 824
Target Start/End: Original strand, 35080694 - 35080788
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaa 824  Q
    ||||||||||||| | |||||||||||||||||||||||||||  |||||||||||||||||  |||||| ||||||||||||||||| ||||||||    
T  35080694 cgttcctacgaatctagaggctcgactctgtaagtgaaaagagggccgtaataaaataaaaa--tattttttttaaaagaacaatgttttatttaaa 35080788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 778 - 903
Target Start/End: Original strand, 23284034 - 23284158
Alignment:
Q  778 ataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaaga-taaatacaatgtgtcgtatatatgcgatacacccaaata 876  Q
    ||||||| |||||||||||| ||||||||| |||||||||||||| |        ||||| ||||||||| |||||||||||||||| |||||||||| |    
T  23284034 ataaaatcaaaacgtattttttttaaaagagcaatgttctatttatatttttt--aaagactaaatacaaggtgtcgtatatatgcggtacacccaaaga 23284131  T
Q  877 tgaaaatcactaccgtatacatgagga 903  Q
    ||||||| |||||||||||||||||||    
T  23284132 tgaaaatgactaccgtatacatgagga 23284158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 732 - 903
Target Start/End: Original strand, 16198719 - 16198890
Alignment:
Q  732 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaa-caatgttctatttaaannnnnn 830  Q
    |||| ||||| ||||||||| |||||  | |||||||||  | || ||||||| |||||||||||| |||  || || |||||||||||||| |          
T  16198719 cctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaaagcaatgttctatttatatttttt 16198818  T
Q  831 naaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
     |||||||||||| || |||||||||||||||||||||||||||  ||||||| |||||||||||||||||||    
T  16198819 -aaaagataaatataaggtgtcgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgagga 16198890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 724 - 926
Target Start/End: Original strand, 22648656 - 22648855
Alignment:
Q  724 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaa-taaaaacgtattttatttaaaagaacaatgttctattta 822  Q
    |||||||||||||||||  |||| |||| |||||||||||||||||   | ||||||||| |||||| |||| || |||||  |||||||||||||||||    
T  22648656 gggtcgttcctacgaatccggagactcg-ctctgtaagtgaaaagaagcctgtaataaaaataaaaatgtatattttttaa--gaacaatgttctattta 22648752  T
Q  823 aannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaa 922  Q
    ||       |||||||||||||||||||||||||||||| |  ||| |||||  ||| ||||||||| ||||| || || | ||| |||||||| |||||    
T  22648753 aatttttt-aaaagataaatacaatgtgtcgtatatatgtggcacatccaaaggtgacaatcactactgtataaataagaaacctcaaaccaccttccaa 22648851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 737 - 903
Target Start/End: Original strand, 34756296 - 34756462
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta-ttttatttaaaagaacaatgttctatttaaannnnnnnaaaa 835  Q
    ||||| ||||||||| ||||| || |||||||||  | || ||||||| ||||| || |||| ||||||||| |||||||||||||| |       ||||    
T  34756296 gaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctatttatatttttt-aaaa 34756394  T
Q  836 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||||||| ||| |||||||||||| |||||||| |  ||||||| |||||||||||||||||||    
T  34756395 gataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 34756462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 737 - 903
Target Start/End: Original strand, 16592005 - 16592170
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 836  Q
    ||||||||||||||| |||||  | |||||||||  |  | ||||||| ||||| |||||| ||||||||| |||||||||||||| |       |||||    
T  16592005 gaatttggaggctcggctctgagaatgaaaagaggccaatgataaaatcaaaacatattttttttaaaagagcaatgttctatttatattttct-aaaag 16592103  T
Q  837 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||  |||||||||||||||| |||||||| |  ||||||| ||||||||||| |||||||    
T  16592104 ataaatacagggtgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatatatgagga 16592170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 6401493 - 6401624
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggt 107  Q
    ||||||||||| ||| |   |||| ||||||||| |||  |||||||||||||||| ||||||||||||  || ||||||| |||||||||| ||||||     
T  6401493 acgccgacacaactaaattttttagaaaatcacaaaatacagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacgacacgtgtctgacacggg 6401592  T
Q  108 gacacgctttatccgaggagtgtccgtacttc 139  Q
    || |||| |||||| |||||||||||| ||||    
T  6401593 gatacgccttatccaaggagtgtccgtgcttc 6401624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 734 - 915
Target Start/End: Complemental strand, 15639817 - 15639635
Alignment:
Q  734 tacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnna- 832  Q
    ||||||||||||||||||  ||| |||||||||| |   |||||||||| |||||| || |||| ||| |||||||||||||| |||||               
T  15639817 tacgaatttggaggctcggttctataagtgaaaataagcccgtaataaa-taaaaatgtttttttttttaaagaacaatgttcaatttattttttttttt 15639719  T
Q  833 -aaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccac 915  Q
     |||||||||||||| ||| ||||||||||||||||| ||||| ||||||||||||  ||||||||| |||| |||||||||||    
T  15639718 taaagataaatacaaggtgacgtatatatgcgatacatccaaagatgaaaatcactgtcgtatacataaggaaccttaaaccac 15639635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 738 - 902
Target Start/End: Original strand, 31194544 - 31194706
Alignment:
Q  738 aatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaaga 837  Q
    |||| ||||||||| |||||  | |||||||||| | || ||||||| |||||||||||  ||||||||| |||||||||||||| |       ||||||    
T  31194544 aattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacgtatttcttttaaaagagcaatgttctatttata-ttttttaaaaga 31194642  T
Q  838 taaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagg 902  Q
    ||||||||| ||| |||||||||||| || ||||| |  ||||||| ||||||||||||||||||    
T  31194643 taaatacaaggtgccgtatatatgcggtaaacccagaggtgaaaat-actaccgtatacatgagg 31194706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 737 - 901
Target Start/End: Original strand, 36187810 - 36187973
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 836  Q
    ||||| ||||||||| |||||  | ||||||||| || || ||||||| ||||||| |||| ||||||||| | |||||||||||| |       ||||     
T  36187810 gaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgttttttttttaaaagagcgatgttctatttatatttttt-aaaat 36187908  T
Q  837 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgag 901  Q
    |||||||||| ||| |||||||||||| |||||||| |  ||||||| |||||||||||||||||    
T  36187909 ataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgag 36187973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 28 - 139
Target Start/End: Original strand, 21814276 - 21814387
Alignment:
Q  28 tttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggag 127  Q
    |||| ||||||||| |||  |||||||||||||||| ||||||||||||| || ||||||| ||||||||||  ||||| ||||||| |||||| ||||     
T  21814276 tttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtctggcacggggacacgccttatccaaggaa 21814375  T
Q  128 tgtccgtacttc 139  Q
    ||| ||| ||||    
T  21814376 tgttcgtgcttc 21814387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 737 - 903
Target Start/End: Complemental strand, 27079182 - 27079015
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt--aaaagaacaatgttctatttaaannnnnnnaaa 834  Q
    ||||| ||||||||| |||||  | |||||||||  | || ||||||| |||||||||||| |||  |||||| |||||||||||||| |       |||    
T  27079182 gaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaagagcaatgttctatttatatttttt-aaa 27079084  T
Q  835 agataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||||| ||| |||||||||||| |||||| |||  ||||||| ||||| |||||||||||||    
T  27079083 agataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaatgactactgtatacatgagga 27079015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 19579696 - 19579818
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggt 107  Q
    |||||||||||||||  || || | ||||||||||||||||||| ||||| | ||| ||||||||||||  || ||||||| |||  |||||||||| |     
T  19579696 acgccgacacagctaataatttgagaaaatcacataatttagtgcaattacaagtgtcggtgtcgtgtcagtgtcggacacgacatatgtctaacaccgg 19579795  T
Q  108 gacacgctttatccgaggagtgt 130  Q
    ||||||| | |||||||||||||    
T  19579796 gacacgcctaatccgaggagtgt 19579818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 737 - 901
Target Start/End: Original strand, 22986488 - 22986652
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta-ttttatttaaaagaacaatgttctatttaaannnnnnnaaaa 835  Q
    ||||| ||||||||  |||||  | |||||||||  | || ||||||| |||||||| |||| ||||||||| |||||||||||| ||        ||||    
T  22986488 gaattcggaggctcagctctgagaatgaaaagaggccagtgataaaatcaaaacgtaattttttttaaaagagcaatgttctatt-aatattttttaaaa 22986586  T
Q  836 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgag 901  Q
    || |||||||| |||||||||||||||| |||||||| |  ||||||| |||||||||||||||||    
T  22986587 gacaaatacaaagtgtcgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgag 22986652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 738 - 903
Target Start/End: Complemental strand, 30854498 - 30854333
Alignment:
Q  738 aatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctatttaaannnnnnnaaaag 836  Q
    |||||||||||||| |||||  | |||||| || || |  ||||||| |||||||||||| ||| |||||| |||||||||||||| |       |||||    
T  30854498 aatttggaggctcggctctgggaatgaaaaaaggtcagcgataaaattaaaacgtatttttttttaaaagagcaatgttctatttatatttttt-aaaag 30854400  T
Q  837 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||| ||| |||||||||||| ||||| || |  ||||||| |||| ||||||||||||||    
T  30854399 ataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactatcgtatacatgagga 30854333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 832 - 903
Target Start/End: Complemental strand, 9364366 - 9364295
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||||| || ||| |||||||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  9364366 aaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 9364295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 19453110 - 19452999
Alignment:
Q  28 tttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggag 127  Q
    |||| ||||||||| ||| ||  ||||||||||||| |||||||||||| ||| ||||||| |||| ||||| |||||| || |||| |||||| |||||    
T  19453110 tttagaaaatcacaaaatataccgtaattatatgtgtcggtgtcgtgtcaatgtcggacacgacacatgtctcacacggagatacgccttatccaaggag 19453011  T
Q  128 tgtccgtacttc 139  Q
     |||||| ||||    
T  19453010 cgtccgtgcttc 19452999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 39698536 - 39698667
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggt 107  Q
    |||| ||||||||||  || || |||||||||||||||| |||||||||| | ||| | ||||||||||| || ||||||| ||| || ||  |||| |     
T  39698536 acgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacatgtatccgacaccga 39698635  T
Q  108 gacacgctttatccgaggagtgtccgtacttc 139  Q
    ||||||| | ||||||||||||||||| ||||    
T  39698636 gacacgcctaatccgaggagtgtccgtgcttc 39698667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 139
Target Start/End: Original strand, 3966523 - 3966629
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgtcc 132  Q
    ||||||||| |||| |||||||||||||||| ||||||||||||  || ||||||| ||| ||||| ||||  | ||||||  | |||||||||||||||    
T  3966523 aaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacaacatgtgtccaacagagggacacgtctaatccgaggagtgtcc 3966622  T
Q  133 gtacttc 139  Q
    || ||||    
T  3966623 gtgcttc 3966629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 18592093 - 18592159
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtct 99  Q
    ||||| |||||||| | |||||||||||||||||||||||||||| || ||||||| ||||||||||    
T  18592093 aaaattacataattcaatgtaattatatgtgccggtgtcgtgtcggtgtcggacacaacacgtgtct 18592159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 21522745 - 21522835
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtc 98  Q
    |||||||||||||||  || |||||||||| |||||||| |||||||||| |  || ||||||||||||| || ||||||| |||||||||    
T  21522745 acgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgtc 21522835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 21533311 - 21533401
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtc 98  Q
    |||||||||||||||  || |||||||||| |||||||| |||||||||| |  || ||||||||||||| || ||||||| |||||||||    
T  21533311 acgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgtc 21533401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 737 - 903
Target Start/End: Original strand, 15480021 - 15480185
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 836  Q
    ||||| ||||||||| |||||  | |||||||||  | || ||||||| ||||| |||||| |||||| || | |||||||||||| |       |||||    
T  15480021 gaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacatattttttttaaa-gaccgatgttctatttatatttttt-aaaag 15480118  T
Q  837 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||||||  ||||||||||||||| |||||||| |  ||||||| |||||||||| ||||||||    
T  15480119 ataaatacaagatgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatgcatgagga 15480185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 728 - 928
Target Start/End: Complemental strand, 17345135 - 17344935
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta-ttttatttaaaagaacaatgttctatttaaann 826  Q
    |||||||||||||||||||| ||| |||| |||||| ||| |  |  |||||||||| |||| ||| |||| ||||||| ||||||||||||||||||      
T  17345135 cgttcctacgaatttggaggttcggctctctaagtggaaaaaagtatgtaataaaattaaaatgtatttttttttaaaataacaatgttctatttaaatt 17345036  T
Q  827 nnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaa 926  Q
          | | ||||||||||  |||| | |||||||| |||||||||| || ||||| |||||||||| ||  | || ||| |||||||| ||| |||||    
T  17345035 ttttatata-ataaatacaagatgtcatgtatatgcggtacacccaaagataaaaattactaccgtatccacaaagaacctcaaaccaccatcccaaaaa 17344937  T
Q  927 ca 928  Q
    ||    
T  17344936 ca 17344935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 832 - 900
Target Start/End: Original strand, 28822367 - 28822435
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatga 900  Q
    |||||||||||| || ||| |||||||||||| ||||||||||  ||||||| ||||||||||||||||    
T  28822367 aaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatga 28822435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 832 - 928
Target Start/End: Original strand, 41911642 - 41911738
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaaca 928  Q
    |||||| |||||||| |||||||||||| ||| ||||||||||  | |||||||||| |||||| ||||||| ||| ||| |||||| | |||||||    
T  41911642 aaaagagaaatacaaggtgtcgtatataagcggtacacccaaaagtaaaaatcactatcgtatatatgaggaacctcaaatcacccttccaaaaaca 41911738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 139
Target Start/End: Original strand, 14873537 - 14873637
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgtcc 132  Q
    |||| |||||||||||||||||||||||||| |||||||      ||| ||||| | ||||||||| ||||| | ||||||| | |||||||||||||||    
T  14873537 aaaagcacataatttagtgtaattatatgtgtcggtgtc------atgtcggacgcaacacgtgtccaacaccgggacacgcctaatccgaggagtgtcc 14873630  T
Q  133 gtacttc 139  Q
    || ||||    
T  14873631 gtgcttc 14873637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 832 - 903
Target Start/End: Complemental strand, 19523274 - 19523203
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||||||||||| ||| |||||||||||| |||||||| |  ||||||| |||||| ||||||||||||    
T  19523274 aaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgagga 19523203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 104
Target Start/End: Complemental strand, 41091296 - 41091225
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacac 104  Q
    |||||||||||||| |||||||||||||||| || ||||||||| ||| ||||| | ||| |||||||||||    
T  41091296 aaaatcacataattcagtgtaattatatgtgtcgatgtcgtgtcaatgtcggacgcgacatgtgtctaacac 41091225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 774 - 824
Target Start/End: Complemental strand, 606288 - 606236
Alignment:
Q  774 cgtaataaaataaaaacgtattttattt--aaaagaacaatgttctatttaaa 824  Q
    |||||||||||||||||||||||| |||  |||||||||||||||||||||||    
T  606288 cgtaataaaataaaaacgtattttttttttaaaagaacaatgttctatttaaa 606236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 737 - 903
Target Start/End: Complemental strand, 2275060 - 2274894
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctatttaaannnnnnnaaaa 835  Q
    ||||| |||||||||  ||||  | |||||||||  | || ||||||| |||||||||||| ||| |||||| | |||||||||||| |       ||||    
T  2275060 gaattcggaggctcggttctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttttaaaagagcgatgttctatttatatttttt-aaaa 2274962  T
Q  836 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||||||| || ||||||||||||  |||||||| |  ||||||| ||||||||||||| |||||    
T  2274961 gataaatacaaggtatcgtatatatgcagtacacccagaggtgaaaatgactaccgtatacacgagga 2274894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 728 - 789
Target Start/End: Complemental strand, 27530672 - 27530611
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaa 789  Q
    ||||||||||||||| ||||||||  ||| |||||||||||||  |||||||||||||||||    
T  27530672 cgttcctacgaatttagaggctcggttctataagtgaaaagaggcccgtaataaaataaaaa 27530611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 738 - 902
Target Start/End: Original strand, 31881364 - 31881528
Alignment:
Q  738 aatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt--aaaagaacaatgttctatttaaannnnnnnaaaa 835  Q
    ||||| |||||||| |||||  | ||||||| | || |||||||||| ||||||| |||| |||  |||||| |||||||||||||| |       ||||    
T  31881364 aatttagaggctcggctctgggaatgaaaagtggtcagtaataaaatcaaaacgttttttttttttaaaagagcaatgttctatttatatttttt-aaaa 31881462  T
Q  836 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagg 902  Q
    ||||||||||  ||| ||||||||||||  ||| ||| | |||||||| ||||||||||||||||||    
T  31881463 gataaatacacggtgccgtatatatgcggaacatccagagatgaaaat-actaccgtatacatgagg 31881528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 733 - 785
Target Start/End: Complemental strand, 22875112 - 22875060
Alignment:
Q  733 ctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaata 785  Q
    |||||||||||||||||||  |||||||||||||||||| | |||||||||||    
T  22875112 ctacgaatttggaggctcggttctgtaagtgaaaagagaacagtaataaaata 22875060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 832 - 903
Target Start/End: Original strand, 16799352 - 16799423
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||| ||||||| || ||| |||||||||||| ||||||||||  ||||||| | |||||||||||||||||    
T  16799352 aaaaaataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgagga 16799423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 21576756 - 21576689
Alignment:
Q  72 gtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgtccgtacttc 139  Q
    ||||||||| ||||||| |||||||||| |||| | ||||||| | ||||||||||||||||| ||||    
T  21576756 gtgtcgatgtcggacacgacacgtgtctgacactgggacacgcctaatccgaggagtgtccgtgcttc 21576689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 832 - 903
Target Start/End: Complemental strand, 27924157 - 27924086
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||||| || ||| |||||||||||| |||| |||||  | ||||| |||||||||||||||||||    
T  27924157 aaaagataaatataaggtgccgtatatatgcggtacatccaaaggtaaaaatgactaccgtatacatgagga 27924086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 832 - 903
Target Start/End: Original strand, 40389561 - 40389632
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||||| || |||||||||||||||| |||| |||||  ||||||| ||||||||||  |||||||    
T  40389561 aaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatttatgagga 40389632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 832 - 902
Target Start/End: Complemental strand, 7670999 - 7670929
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagg 902  Q
    |||||||||||| || ||| ||||||| | || ||||||||||  ||||||| ||||||||||||||||||    
T  7670999 aaaagataaatataaggtgccgtatatttacggtacacccaaaggtgaaaatgactaccgtatacatgagg 7670929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 11685966 - 11686023
Alignment:
Q  40 cataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtc 98  Q
    |||||||||||||||||||||||| ||||||||| ||| || ||||||| |||||||||    
T  11685966 cataatttagtgtaattatatgtgtcggtgtcgt-tcggtgtcggacacgacacgtgtc 11686023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 75
Target Start/End: Original strand, 36838563 - 36838605
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgt 75  Q
    ||||| ||||||||||||||||||||||||| |||||||||||    
T  36838563 aaaattacataatttagtgtaattatatgtgtcggtgtcgtgt 36838605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 14674264 - 14674313
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaatta 57  Q
    |||||||||||||||  || || |||||||||||||||||||||||||||    
T  14674264 acgccgacacagctaataatttgaaaaaatcacataatttagtgtaatta 14674313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 98
Target Start/End: Original strand, 21542042 - 21542115
Alignment:
Q  26 aatttaaaaa-atcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtc 98  Q
    |||||||||| || |||||||| |||||||||| | ||| ||||||||||||| || ||||||| |||||||||    
T  21542042 aatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtgtc 21542115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 7677703 - 7677819
Alignment:
Q  11 ccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgac 110  Q
    ||||||||||||  || || |||||||||||||||| |||| ||||| | ||| ||||||||||||| || | |||||  ||| ||||  |||| | |||    
T  7677703 ccgacacagctaataatttgaaaaaatcacataattcagtgcaattagaagtgtcggtgtcgtgtcggtgtctgacacgtcacatgtccgacaccgggac 7677802  T
Q  111 acgctttatccgaggag 127  Q
    |||| | ||||||||||    
T  7677803 acgcctaatccgaggag 7677819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 17593715 - 17593667
Alignment:
Q  91 cacgtgtctaacacggtgacacgctttatccgaggagtgtccgtacttc 139  Q
    |||||||| ||||| | ||||||||| ||||||||||||||||||||||    
T  17593715 cacgtgtccaacaccgggacacgcttaatccgaggagtgtccgtacttc 17593667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 33178020 - 33178084
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    ||||||||||| |||  || || ||||||||||||||||||||||||||| | ||| ||||||||    
T  33178020 acgccgacacaactaataatttaaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 33178084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 37328884 - 37328828
Alignment:
Q  32 aaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacac 88  Q
    |||||||||| |||| |||||||||| ||||| ||||||||||||| || |||||||    
T  37328884 aaaaatcacaaaattcagtgtaattacatgtgtcggtgtcgtgtcggtgtcggacac 37328828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 42029747 - 42029811
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    |||||||||||  || |||||||| |||||||||||||| | |||||||||||||  ||||||||    
T  42029747 acgccgacacaattaaaaaatttagaaaatcacataattcaatgtaattatatgtatcggtgtcg 42029811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 43564900 - 43564940
Alignment:
Q  32 aaaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    |||||||||||||||||||||||||||| ||| ||||||||    
T  43564900 aaaaatcacataatttagtgtaattataagtgtcggtgtcg 43564940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 832 - 883
Target Start/End: Complemental strand, 7338074 - 7338023
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaat 883  Q
    ||||||||||||||| |||||||||||||||| |||||| |||  |||||||    
T  7338074 aaaagataaatacaaggtgtcgtatatatgcggtacacctaaaggtgaaaat 7338023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 72
Target Start/End: Complemental strand, 16203834 - 16203795
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    |||||| |||||||||||||||||||||||| ||||||||    
T  16203834 aaaatctcataatttagtgtaattatatgtgtcggtgtcg 16203795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 59
Target Start/End: Complemental strand, 25979018 - 25978983
Alignment:
Q  24 aaaatttaaaaaatcacataatttagtgtaattata 59  Q
    |||||||||||||||||||||||||||||| |||||    
T  25979018 aaaatttaaaaaatcacataatttagtgtagttata 25978983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 134
Target Start/End: Original strand, 31084318 - 31084438
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggt 107  Q
    |||||||||||||||  || || |||||||||||||||| | |||||||| | ||| || ||||||||      ||||||| |||||||||  |||| |     
T  31084318 acgccgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtcgtgt------cggacacgacacgtgtccgacactgg 31084411  T
Q  108 gacacgctttatccgaggagtgtccgt 134  Q
    |||| || | |||||||||||||||||    
T  31084412 gacatgcctaatccgaggagtgtccgt 31084438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 143
Target Start/End: Complemental strand, 36642826 - 36642692
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggt 107  Q
    |||||||||||| ||  || || ||||| | ||||| |||||||||| |||| ||| ||||||| ||| | || ||||||| |||||||||  ||||||     
T  36642826 acgccgacacagttaataatttgaaaaagtgacatattttagtgtaaatataagtgtcggtgtcatgttggtgtcggacacgacacgtgtccgacacgg- 36642728  T
Q  108 gacacgctttatccgaggagtgtccgtacttcgtag 143  Q
    ||||||| | ||  |||||||||| || ||||||||    
T  36642727 gacacgcctaattggaggagtgtcggtgcttcgtag 36642692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 75
Target Start/End: Complemental strand, 6471928 - 6471886
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgt 75  Q
    |||||||||||||| ||||||||||||||||  ||||||||||    
T  6471928 aaaatcacataattcagtgtaattatatgtgtgggtgtcgtgt 6471886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 21191118 - 21191056
Alignment:
Q  10 gccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    |||||||||||||  || || |||||||||||||||| |||||||||| | ||| ||||||||    
T  21191118 gccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 21191056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 63
Target Start/End: Original strand, 27144484 - 27144513
Alignment:
Q  34 aaatcacataatttagtgtaattatatgtg 63  Q
    ||||||||||||||||||||||||||||||    
T  27144484 aaatcacataatttagtgtaattatatgtg 27144513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1320 (Bit Score: 96; Significance: 1e-46; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 726 - 915
Target Start/End: Complemental strand, 1534 - 1346
Alignment:
Q  726 gtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaan 825  Q
    ||||||||||||||| || ||||||  |||||||||||||||||  |||||||||||||||||||||||||| |||||||||| |||||||||||||||     
T  1534 gtcgttcctacgaatctgaaggctctgctctgtaagtgaaaagaagtccgtaataaaataaaaacgtattttttttaaaagaataatgttctatttaaa- 1436  T
Q  826 nnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccac 915  Q
          |||||||||||| || |||  |||||||||| |||||||||||| |||||||||||| |||||||||||||| ||| |||||||    
T  1435 atttttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaaaccac 1346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 96; Significance: 1e-46; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 726 - 918
Target Start/End: Complemental strand, 39108 - 38914
Alignment:
Q  726 gtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaa---aagaacaatgttctattta 822  Q
    ||||||||||||||| ||||||||||| ||||||||| ||||||| ||||||||||||||||||||| |||| |||     || ||||||||||||||||    
T  39108 gtcgttcctacgaatctggaggctcgattctgtaagtaaaaagaggtccgtaataaaataaaaacgtttttttttttttttaaaaacaatgttctattta 39009  T
Q  823 aannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccct 918  Q
    ||       ||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||| ||| ||||||||||    
T  39008 aatttttt-aaaagataaatacaaggtgtcgtatatatgcgatacacacaaatgtgaaaatcactaccgtatatatgaggaacctcaaaccaccct 38914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 93; Significance: 9e-45; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 744 - 926
Target Start/End: Original strand, 199 - 380
Alignment:
Q  744 gaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaata 843  Q
    |||||||| ||||| ||||||| ||||  || |||||||||||||| |||||||  |||||||||||||||||||||||||       ||||||||||||    
T  199 gaggctcggctctgcaagtgaatagaggcccataataaaataaaaatgtatttttattaaaagaacaatgttctatttaaatttttt-aaaagataaata 297  T
Q  844 caatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaa 926  Q
    ||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||| || ||| |||||||||||| |||||    
T  298 caaggtgtcgtatatatgcggtacacccaaatgtgaaaatcactaccgtatacatgatgaacctcaaaccaccctcccaaaaa 380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 93; Significance: 9e-45; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 727 - 926
Target Start/End: Complemental strand, 26279723 - 26279524
Alignment:
Q  727 tcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaann 826  Q
    ||||||||| ||||||||||| || ||| ||||||||||||||| ||| || ||||||||||||||||||| ||||||||||||||||||||||||||      
T  26279723 tcgttcctatgaatttggaggttcaactttgtaagtgaaaagaggtccatagtaaaataaaaacgtatttt-tttaaaagaacaatgttctatttaaa-t 26279626  T
Q  827 nnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcact--accgtatacatgaggatccttaaaccaccctccaaaa 924  Q
         |||||||||||| || ||||||||||||||| ||||||||||| ||||||||||||  ||  |||||||||||| ||| |||||||||||| |||    
T  26279625 tttttaaaagataaatagaaggtgtcgtatatatgcaatacacccaaagatgaaaatcactacacattatacatgaggaacctcaaaccaccctcccaaa 26279526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 742 - 928
Target Start/End: Complemental strand, 52374824 - 52374638
Alignment:
Q  742 tggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta-ttttatttaaaagaacaatgttctatttaaannnnnnnaaaagataa 840  Q
    |||| |||| ||| |||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||         || ||||    
T  52374824 tggatgctcaactttgtaagtgaaaagaaatccgtaataaaataaaaacgtatttttttttaaaagaacaatgttctatttaaatttttttttaa-ataa 52374726  T
Q  841 atacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaaca 928  Q
    ||||||||||||||||| |||||||||| | |||   ||||||||||||||||||||||| || ||| | ||||||  ||||||||||    
T  52374725 atacaatgtgtcgtatagatgcgatacatctaaaggagaaaatcactaccgtatacatgaagaacctcataccacctcccaaaaaaca 52374638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 737 - 903
Target Start/End: Original strand, 8073272 - 8073437
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 836  Q
    ||||| ||||||||| ||||| || ||||||||| || || ||||||| |||||||||||| |||||||||  ||||||||||||| |       |||||    
T  8073272 gaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagtaatgttctatttatatttttt-aaaag 8073370  T
Q  837 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||| |||||||||||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  8073371 ataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgagga 8073437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 728 - 926
Target Start/End: Original strand, 54574748 - 54574949
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta----ttttatttaaaagaacaatgttctatttaa 823  Q
    ||||||||||||| ||||||||||   ||| |||||||| |||| ||||||||||||||| | |||    |||| |||||||||||||||||||||||||    
T  54574748 cgttcctacgaatctggaggctcggtgctggaagtgaaatgagacccgtaataaaataaagatgtattttttttttttaaaagaacaatgttctatttaa 54574847  T
Q  824 annnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaa 923  Q
    |       |||| |||||||||| ||  |||||||||||| ||||||||||  | |||||||||||| |||||||||||| ||| ||||| |||||| ||    
T  54574848 a-tttttcaaaatataaatacaaggtaccgtatatatgcggtacacccaaaagtaaaaatcactaccatatacatgaggaacctcaaaccgccctcccaa 54574946  T
Q  924 aaa 926  Q
    |||    
T  54574947 aaa 54574949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 728 - 868
Target Start/End: Original strand, 23641242 - 23641382
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta-ttttatttaaaagaacaatgttctatttaaann 826  Q
    ||||||||||||| ||||||||||  |||||| ||||||||||| |||| |||||||||||||||| |||| |||||||||||||  ||||||||| |      
T  23641242 cgttcctacgaatctggaggctcggttctgtaggtgaaaagagacccgtgataaaataaaaacgtatttttttttaaaagaacaacattctatttata-t 23641340  T
Q  827 nnnnnaaaagataaatacaatgtgtcgtatatatgcgataca 868  Q
         |||||||||||||||||||||||||||||||| ||||    
T  23641341 tttttaaaagataaatacaatgtgtcgtatatatgcggtaca 23641382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 729 - 926
Target Start/End: Original strand, 28689287 - 28689483
Alignment:
Q  729 gttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnn 828  Q
    ||||| || |||||||||| ||| ||||  ||||||||||||   ||||||||||||||||  |||||| ||||||| || |||||||||||||||        
T  28689287 gttcccacaaatttggaggttcggctctccaagtgaaaagaggctcgtaataaaataaaaagatattttttttaaaaaaagaatgttctatttaaatttt 28689386  T
Q  829 nnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaa 926  Q
       ||||||||||||||| ||| ||||||||||||||| | |||||  ||||||||||| ||||||||||||| |  || |||| ||||||| |||||    
T  28689387 ca-aaaagataaatacaaggtgccgtatatatgcgatatatccaaaggtgaaaatcactgccgtatacatgagaaatctcaaactaccctcccaaaaa 28689483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 738 - 902
Target Start/End: Complemental strand, 36606136 - 36605973
Alignment:
Q  738 aatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaaga 837  Q
    |||| ||||| ||| ||||| || ||||||||| || || ||||||| |||||||||||| ||||| ||| |||||||||||||| |       ||||||    
T  36606136 aattcggaggttcggctctggaaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaatagagcaatgttctatttatattttttaaaaaga 36606037  T
Q  838 taaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagg 902  Q
    ||||||||| ||| |||||||||||| |||||||| | |||||||| ||||||||||||||||||    
T  36606036 taaatacaaggtgccgtatatatgcggtacacccagagatgaaaat-actaccgtatacatgagg 36605973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 728 - 901
Target Start/End: Complemental strand, 49393269 - 49393099
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 827  Q
    |||||||||||||  ||||||||| || |||||||||||| |||  |||||||||||||||| ||||||| ||| ||||||||||||||| ||||||       
T  49393269 cgttcctacgaatccggaggctcggct-tgtaagtgaaaaaagactcgtaataaaataaaaatgtatttttttttaaagaacaatgttctctttaaa-tt 49393172  T
Q  828 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgag 901  Q
        ||||||||||||||| | |||||||||||| | ||||||||||  | ||||| |||||||||||||||||    
T  49393171 ttttaaaagataaatacaaggcgtcgtatatatgtg-tacacccaaaggtaaaaattactaccgtatacatgag 49393099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 729 - 926
Target Start/End: Complemental strand, 25855601 - 25855406
Alignment:
Q  729 gttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnn 828  Q
    |||||| || || ||||||||||  | ||||| |||||| ||  ||||||||||||||||| |||| || ||| ||||||||||||||||||||||        
T  25855601 gttcctgcgcatctggaggctcggttatgtaaatgaaaaaaggcccgtaataaaataaaaatgtatgtttttttaaagaacaatgttctatttaaa-ttt 25855503  T
Q  829 nnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaa 926  Q
       ||||||| ||||||| ||||||||||||||   | ||||||||  ||||||||||||||||||||| || || ||| |||||||||||| |||||    
T  25855502 tttaaaagat-aatacaaggtgtcgtatatatgtagtgcacccaaagttgaaaatcactaccgtatacacgaagaacctcaaaccaccctcccaaaaa 25855406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 761 - 916
Target Start/End: Complemental strand, 8420476 - 8420320
Alignment:
Q  761 gtgaaaagagatccgtaataaaataaaaacgtattt--tatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatat 858  Q
    ||||||||||| || |||||||||||||| ||||||  | |||||||||| |||||||||||||||       ||||||||||||||| ||| |||||||    
T  8420476 gtgaaaagagacccataataaaataaaaatgtatttcttttttaaaagaataatgttctatttaaatttttt-aaaagataaatacaaggtgccgtatat 8420378  T
Q  859 atgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccacc 916  Q
    |||   ||||||||||| ||||||||||| ||||||| | ||||| ||| ||||||||    
T  8420377 atgttgtacacccaaatgtgaaaatcactgccgtatatacgaggaacctcaaaccacc 8420320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 732 - 903
Target Start/End: Original strand, 43207167 - 43207336
Alignment:
Q  732 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnn 831  Q
    |||| ||||||||||||||| |||||  | |||||||||  | || ||||| |||||||||||||| ||||||||| |||||||||||||| |           
T  43207167 cctaagaatttggaggctcggctctgggaatgaaaagaggccagtgataaattaaaaacgtattttttttaaaagagcaatgttctatttata-tttttt 43207265  T
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||||| || ||| |||||||||||| ||||  ||||  ||||||| |||||||||||||||||||    
T  43207266 aaaagataaatataaggtgccgtatatatgcggtaca-tcaaaggtgaaaatgactaccgtatacatgagga 43207336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 4987355 - 4987224
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggt 107  Q
    |||||||||||||||  || || |||||||||||||||| |||||||||| | |||  |||| ||||||| ||  |||||| |||||||||  |||| |     
T  4987355 acgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgacgtgtcggtgttggacacgacacgtgtccgacaccgg 4987256  T
Q  108 gacacgctttatccgaggagtgtccgtacttc 139  Q
    ||||||| | ||||||||||||||||||||||    
T  4987255 gacacgcctaatccgaggagtgtccgtacttc 4987224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 737 - 903
Target Start/End: Complemental strand, 18372655 - 18372486
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 836  Q
    ||||| ||||||||||| |||  | ||||||||| || || ||||||| |||||||||||| ||||||||| |||||||||||||| |       |||||    
T  18372655 gaattcggaggctcgacactgggaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttata-ttttttaaaag 18372557  T
Q  837 ataaatacaatgtgtcgtatatat----gcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||| |||||||||||||    ||| ||||| || |  ||||||| |||||||||||||||||||    
T  18372556 ataaatacaaggtgtcgtatatatgcgcgcggtacacacagaggtgaaaatgactaccgtatacatgagga 18372486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 737 - 903
Target Start/End: Original strand, 34290569 - 34290735
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctatttaaannnnnnnaaaa 835  Q
    ||||| ||||||||| |||||  | ||||||||  || || ||||||| |||||||||||| ||| |||| |||||||||||||||| |       ||||    
T  34290569 gaattcggaggctcggctctgggaatgaaaagaagtcagtgataaaatcaaaacgtatttttttttaaaaaaacaatgttctatttatatttttt-aaaa 34290667  T
Q  836 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||| || ||| |||||||||||| ||||||||||  ||||||| ||||||||||| |||||||    
T  34290668 gataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgagga 34290735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 737 - 903
Target Start/End: Complemental strand, 47467857 - 47467691
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattta-aaagaacaatgttctatttaaannnnnnnaaaa 835  Q
    ||||| ||||||||| |||||  | ||||||||| || || ||||||| ||||||| |||| |||  ||||| | |||||||||||| |       ||||    
T  47467857 gaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtgttttttttttaaagagcgatgttctatttatatttttt-aaaa 47467759  T
Q  836 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||||||| ||| ||||||||||||||||||||| |  ||||||| |||||||||||||||||||    
T  47467758 gataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccgtatacatgagga 47467691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 753 - 903
Target Start/End: Original strand, 3953846 - 3953995
Alignment:
Q  753 ctctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtc 852  Q
    ||||| || |||||||||  | || ||||||| |||| ||||||| |||||||||||||||||||||||| |       ||||||||||||||| ||| |    
T  3953846 ctctggaaatgaaaagaggccagtgataaaattaaaatgtattttttttaaaagaacaatgttctatttatatttttt-aaaagataaatacaaggtgcc 3953944  T
Q  853 gtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||||||| |||||||| |  ||||||| |  ||||||||||||||||    
T  3953945 gtatatatgcggtacacccagaggtgaaaatgaaaaccgtatacatgagga 3953995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 728 - 925
Target Start/End: Original strand, 32319082 - 32319276
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 827  Q
    ||||||| | ||| |||||||||   |||||||||||||| || || ||||||||||||||| |||  || ||  |||||| |||||||||||||||       
T  32319082 cgttcctgcaaatatggaggctcagttctgtaagtgaaaataggtctgtaataaaataaaaatgtaagttttt--aaagaataatgttctatttaaattt 32319179  T
Q  828 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaa 925  Q
        ||||||||||||||| |||| ||||||||||| ||||||||||  ||||||| |||| | |||| | ||||| ||| |||| || |||||||||    
T  32319180 ttt-aaaagataaatacaaagtgttgtatatatgcggtacacccaaaggtgaaaattactatcttatatacgaggaacctcaaactactctccaaaaa 32319276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 737 - 903
Target Start/End: Complemental strand, 21582945 - 21582778
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt--aaaagaacaatgttctatttaaannnnnnnaaa 834  Q
    ||||| ||||||||| || ||  | |||||||||  | || ||||||| |||||||||||| |||  |||||||||||||| |||||| |       |||    
T  21582945 gaattcggaggctcggctttgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaagaacaatgttttatttatatttttt-aaa 21582847  T
Q  835 agataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||||| ||| |||||||||||| |||||||| |  ||||||| |||||||||||||||||||    
T  21582846 agataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 21582778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 737 - 902
Target Start/End: Original strand, 36715957 - 36716123
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta--ttttatttaaaagaacaatgttctatttaaannnnnnnaaa 834  Q
    ||||| ||||||||| ||||| || |||||||||  | || ||||||||||||| ||  |||||||||||||| |||||||||||||| |       |||    
T  36715957 gaattcggaggctcggctctggaaatgaaaagaggccagtgataaaataaaaacataatttttatttaaaagagcaatgttctatttata-ttttttaaa 36716055  T
Q  835 agataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagg 902  Q
    |||||||||||| ||| |||||||||||| |||||||| |  ||||||  || ||||||||| |||||    
T  36716056 agataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaacgaccaccgtatacgtgagg 36716123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 732 - 903
Target Start/End: Complemental strand, 37168545 - 37168374
Alignment:
Q  732 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctatttaaannnnnn 830  Q
    |||| ||||| ||||||||| |||||  | |||||||||  | || ||||||| |||||||||||| ||| |||| |||||||||||||||| |          
T  37168545 cctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttttaaaaaaacaatgttctatttatatttttt 37168446  T
Q  831 naaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
     |||||||||||| || ||| |||||||||| | || |||||||  ||||||| |||||||||||||||||||    
T  37168445 -aaaagataaatataaggtgccgtatatatgtggtatacccaaaggtgaaaatgactaccgtatacatgagga 37168374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 737 - 903
Target Start/End: Original strand, 38681026 - 38681192
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta-ttttatttaaaagaacaatgttctatttaaannnnnnnaaaa 835  Q
    ||||| ||||||||| ||||| || |||||||||  | || ||||||| ||||| || |||| ||||||||| |||||||||||||| |       ||||    
T  38681026 gaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctatttatatttttt-aaaa 38681124  T
Q  836 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||||||| ||| ||||| |||||| |||| ||| |  ||||||| |||||||||||||||||||    
T  38681125 gataaatacaaggtgccgtatgtatgcggtacatccagaggtgaaaatgactaccgtatacatgagga 38681192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 732 - 903
Target Start/End: Complemental strand, 44708654 - 44708484
Alignment:
Q  732 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnn 831  Q
    |||| ||||| |||||||| ||||||  | |||||||||  | || ||||||| |||||||||||| || |||| |  ||||||||||||| |           
T  44708654 cctaagaattcggaggctcaactctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaagaaatgttctatttatatttttt- 44708556  T
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||||| || ||| ||||||||| || ||||||||||  ||||||| |||||||||||||||||||    
T  44708555 aaaagataaatataaggtgccgtatatatccggtacacccaaaggtgaaaatgactaccgtatacatgagga 44708484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 737 - 903
Target Start/End: Original strand, 54619136 - 54619302
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta-ttttatttaaaagaacaatgttctatttaaannnnnnnaaaa 835  Q
    ||||| ||||||||| ||||| || ||||||||   |  | ||||||| ||||| || |||| ||||||||| |||||||||||||| |       ||||    
T  54619136 gaattcggaggctcggctctggaaatgaaaagaagccaatgataaaatcaaaacataattttttttaaaagagcaatgttctatttatatttttt-aaaa 54619234  T
Q  836 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||||||| ||| |||||||||||| |||||||| |  ||||||| |||||||||||||||||||    
T  54619235 gataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 54619302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 31 - 130
Target Start/End: Original strand, 25064927 - 25065024
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgt 130  Q
    |||||||||||||||||||||||||||| |||   ||| |||||| | || ||||||| |||||||||| |||| | |||||| ||||||||||||||||    
T  25064927 aaaaaatcacataatttagtgtaattatgtgtt--ggtatcgtgttggtgtcggacacgacacgtgtctgacaccgggacacggtttatccgaggagtgt 25065024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 34185187 - 34185056
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggt 107  Q
    |||||||||| ||||  || || ||||||||||| |||| |||||||||| | ||| |||||||||||| ||| ||||||  ||| |||||  |||| |     
T  34185187 acgccgacacggctaataatttcaaaaaatcacacaattcagtgtaattacaagtgtcggtgtcgtgtccatgtcggacaagacatgtgtccgacaccgg 34185088  T
Q  108 gacacgctttatccgaggagtgtccgtacttc 139  Q
    ||||||| | ||||||||||||||||| ||||    
T  34185087 gacacgcctaatccgaggagtgtccgtgcttc 34185056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 14209108 - 14209197
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgt 97  Q
    ||||||||||| |||  || ||||||||||||||||||| |||||||||| | ||| | ||||||||||| || ||||||| ||||||||    
T  14209108 acgccgacacaactaataattttaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacacgtgt 14209197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 737 - 901
Target Start/End: Original strand, 27078501 - 27078666
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta--ttttatttaaaagaacaatgttctatttaaannnnnnnaaa 834  Q
    ||||| ||||||| | ||||| || ||||||||| || || ||||||| ||||| ||  |||| ||||||| | |||||||||||||| |       |||    
T  27078501 gaattcggaggcttggctctggaaatgaaaagaggtcagtgataaaatcaaaacataatttttttttaaaaaagcaatgttctatttatatttttt-aaa 27078599  T
Q  835 agataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgag 901  Q
    |||||||||||| ||| |||||||||||| || ||||| |  ||||||| |||||||||||||||||    
T  27078600 agataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgag 27078666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 737 - 901
Target Start/End: Original strand, 27084298 - 27084463
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta--ttttatttaaaagaacaatgttctatttaaannnnnnnaaa 834  Q
    ||||| ||||||| | ||||| || ||||||||| || || ||||||| ||||| ||  |||| ||||||| | |||||||||||||| |       |||    
T  27084298 gaattcggaggcttggctctggaaatgaaaagaggtcagtgataaaatcaaaacataatttttttttaaaaaagcaatgttctatttatatttttt-aaa 27084396  T
Q  835 agataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgag 901  Q
    |||||||||||| ||| |||||||||||| || ||||| |  ||||||| |||||||||||||||||    
T  27084397 agataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgag 27084463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 837 - 926
Target Start/End: Complemental strand, 29598179 - 29598091
Alignment:
Q  837 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaa 926  Q
    |||||||||| ||  |||||||||| ||||||| |||| |||||| |||||||||||||||||||||  || |||||| |||||||||||    
T  29598179 ataaatacaaggttccgtatatatgtgatacactcaaagatgaaa-tcactaccgtatacatgaggaatctcaaaccagcctccaaaaaa 29598091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 762 - 903
Target Start/End: Original strand, 53149272 - 53149413
Alignment:
Q  762 tgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatat 860  Q
    |||||||||| | || ||||||| ||||||| |||| ||| |||||| | |||||||||||| |       ||||||||||||||| ||| |||||||||    
T  53149272 tgaaaagagaccagtgataaaatcaaaacgtttttttttttaaaagagcgatgttctatttatatttttt-aaaagataaatacaaggtgccgtatatat 53149370  T
Q  861 gcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||| ||||| || | || ||||| |||||||||||||||||||    
T  53149371 gcggtacactcagagataaaaatgactaccgtatacatgagga 53149413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 762 - 903
Target Start/End: Original strand, 9878646 - 9878786
Alignment:
Q  762 tgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatg 861  Q
    ||||||||| || || |||||||  ||||||||||| ||||||||| |||| ||||||||| |       |||||||||||| || |||  |||||||||    
T  9878646 tgaaaagaggtcagtgataaaatctaaacgtattttttttaaaagagcaatattctatttatatttttt-aaaagataaatataaggtgcagtatatatg 9878744  T
Q  862 cgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    || ||||||||||  ||||||| |||| ||||||||| ||||    
T  9878745 cggtacacccaaaggtgaaaatgactatcgtatacataagga 9878786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 35222986 - 35223053
Alignment:
Q  72 gtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgtccgtacttc 139  Q
    |||||| || ||||||  |||||||||| |||||| ||||||||||||||||||||||||||| ||||    
T  35222986 gtgtcggtgtcggacatgacacgtgtctgacacggggacacgctttatccgaggagtgtccgtgcttc 35223053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 725 - 870
Target Start/End: Complemental strand, 42453590 - 42453444
Alignment:
Q  725 ggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaa-cgtattttattt--aaaagaacaatgttctattt 821  Q
    ||||||||||||||||  | || |||||||||||||||||||| |  |  ||||| ||||||||| | |||||| |||  ||||||||||||||| ||||    
T  42453590 ggtcgttcctacgaatgagaag-ctcgactctgtaagtgaaaaaatgtttgtaatgaaataaaaaacatattttttttttaaaagaacaatgttcaattt 42453492  T
Q  822 aaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacc 870  Q
    |||       ||||||||||||||| ||||| |||||||||||||||||    
T  42453491 aaatttttt-aaaagataaatacaaggtgtcatatatatgcgatacacc 42453444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 11665964 - 11666030
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtct 99  Q
    ||||||||| ||||||||||||||||||||| ||||||||||| ||||   ||||| ||||||||||    
T  11665964 aaaatcacacaatttagtgtaattatatgtgtcggtgtcgtgttgatgttagacacgacacgtgtct 11666030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 728 - 871
Target Start/End: Original strand, 50258548 - 50258690
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 827  Q
    |||||||  ||||| ||||||||| |||||  |  ||||||||||| || ||||||| ||||| |||||| || |||||| | |||||||||||| |       
T  50258548 cgttcctgagaattcggaggctcggctctgggaacgaaaagagatcagtgataaaatcaaaacatatttttttaaaaagagcgatgttctatttatattt 50258647  T
Q  828 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacaccc 871  Q
        |||| |||||||||| |||||||||||||||| |||||||    
T  50258648 tttaaaaa-ataaatacaaggtgtcgtatatatgcggtacaccc 50258690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 832 - 901
Target Start/End: Original strand, 53506912 - 53506981
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgag 901  Q
    |||||||||||| || ||  |||||||||||| ||||||||||  ||||||| |||||||||||||||||    
T  53506912 aaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 53506981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 15314917 - 15314873
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgt 75  Q
    |||||||||||||||||||||||||||||||||  ||||||||||    
T  15314917 aaaaaatcacataatttagtgtaattatatgtgttggtgtcgtgt 15314873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 832 - 903
Target Start/End: Complemental strand, 42098879 - 42098808
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||||||||||| ||| |||||||||||| || || || |  ||||||| |||||||||||||||||||    
T  42098879 aaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatacatgagga 42098808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 732 - 898
Target Start/End: Original strand, 54407083 - 54407252
Alignment:
Q  732 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt----aaaagaacaatgttctatttaaannn 827  Q
    |||| ||||| ||||||||| |||||  | |||||||||  | || ||||||| ||||||| |||| |||    |||| |||||||||||||||| |       
T  54407083 cctaagaattcggaggctcggctctgggaatgaaaagaggccggtgataaaatcaaaacgtttttttttttaaaaaaaaaacaatgttctatttatattt 54407182  T
Q  828 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacat 898  Q
        |||||||||||| || ||| |||||||||||| |||| |||||  ||||||| ||||||||||||||    
T  54407183 ttt-aaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacat 54407252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 27505243 - 27505309
Alignment:
Q  10 gccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtc 76  Q
    |||||||||||||  || ||| ||||||||||||||| |||||||||| | ||| ||||||||||||    
T  27505243 gccgacacagctaataatttttaaaaatcacataattaagtgtaattacaagtgtcggtgtcgtgtc 27505309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 732 - 818
Target Start/End: Original strand, 48720439 - 48720525
Alignment:
Q  732 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttcta 818  Q
    |||| ||||| ||||||||| |||||  | ||||||||| |  || ||||||| |||||||||||| ||||||||| ||||||||||    
T  48720439 cctaagaattgggaggctcggctctgggaatgaaaagaggtaagtgataaaatcaaaacgtattttttttaaaagagcaatgttcta 48720525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 728 - 786
Target Start/End: Complemental strand, 52973495 - 52973437
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataa 786  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||  || |||||||||||    
T  52973495 cgttcctacgaatttagaggctcgattctgtaagagaaaagaggcccataataaaataa 52973437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 7928468 - 7928509
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    |||||||||||||||| |||||||||||||||| ||||||||    
T  7928468 aaaaaatcacataattcagtgtaattatatgtgtcggtgtcg 7928509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 72
Target Start/End: Complemental strand, 40993376 - 40993335
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    |||||||||||||||| |||||||||||||||| ||||||||    
T  40993376 aaaaaatcacataattcagtgtaattatatgtgtcggtgtcg 40993335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 152
Target Start/End: Complemental strand, 41961691 - 41961570
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgt 130  Q
    |||| ||||||| |||  ||||||||| | ||| ||||||||||||| |  ||||||| |||||||||  |||| | ||||||| | ||||||| |||||    
T  41961691 aaaatatcacattattcggtgtaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgagaagtgt 41961592  T
Q  131 ccgtacttcgtagatgtaaagt 152  Q
    |||| |||| ||| | ||||||    
T  41961591 ccgtgcttcataggtataaagt 41961570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 732 - 903
Target Start/End: Original strand, 50939162 - 50939332
Alignment:
Q  732 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnn 831  Q
    |||| ||||| || |||||| |||||  | |||||||||  | || ||||||| |||||||||||| || |||| | ||||| |||||||| |           
T  50939162 cctaagaattcgggggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaagcaatgatctatttatatttttt- 50939260  T
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||||| || ||| |||||||||  | ||||||||||  | ||||| |||||||||||||||||||    
T  50939261 aaaagataaatataaggtgccgtatatatatggtacacccaaaggtaaaaatgactaccgtatacatgagga 50939332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 1509539 - 1509599
Alignment:
Q  13 gacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgt 73  Q
    ||||||||||  || || ||||||||||||||||||||||||||| | ||| |||||||||    
T  1509539 gacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgt 1509599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 11313839 - 11313795
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcg 77  Q
    |||||||||||||||||||||||||||||||   |||||||||||    
T  11313839 aaaatcacataatttagtgtaattatatgtgttagtgtcgtgtcg 11313795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 104
Target Start/End: Complemental strand, 15796358 - 15796262
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacac 104  Q
    |||||||||||| ||  || || ||||||||| |||||| |||||||||| |  || ||||||||||| | || ||||||| ||||||||| |||||    
T  15796358 acgccgacacagttaataatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtcgtgtaggtgtcggacacaacacgtgtccaacac 15796262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 738 - 782
Target Start/End: Complemental strand, 29598219 - 29598175
Alignment:
Q  738 aatttggaggctcgactctgtaagtgaaaagagatccgtaataaa 782  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||    
T  29598219 aattcggaggctcgactttgtaagtgaaaagaggtccgtaataaa 29598175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 38731233 - 38731277
Alignment:
Q  28 tttaaaaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    ||||||||||||||||||| |||||| ||||||||| ||||||||    
T  38731233 tttaaaaaatcacataattcagtgtagttatatgtgtcggtgtcg 38731277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 55212960 - 55213047
Alignment:
Q  10 gccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtc 98  Q
    |||||||||| ||  || |||||||||||||||||||||||| ||||| | ||| |||||| |||||| || ||| ||| |||||||||    
T  55212960 gccgacacagttaataattttaaaaaatcacataatttagtgcaattacaagtgtcggtgt-gtgtcggtgtcgggcacaacacgtgtc 55213047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 55401070 - 55401134
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    ||||||||||| |||  || || ||||||||||||||||||||||||||| | ||| ||||||||    
T  55401070 acgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 55401134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 837 - 916
Target Start/End: Complemental strand, 790009 - 789930
Alignment:
Q  837 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccacc 916  Q
    |||||||||| ||||| ||||||||   ||||||||||  | |||||||| ||| |||||||||||| ||| ||||||||    
T  790009 ataaatacaaggtgtcatatatatgttgtacacccaaaggtaaaaatcaccaccatatacatgaggaacctcaaaccacc 789930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 128
Target Start/End: Complemental strand, 8039866 - 8039779
Alignment:
Q  41 ataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagt 128  Q
    |||||| |||||||||||||||| ||||||||||||| || ||||||  | || ||||  |||| | ||||||||| |||||| ||||    
T  8039866 ataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacatgagacatgtccgacaccgggacacgcttaatccgaagagt 8039779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 13845536 - 13845469
Alignment:
Q  72 gtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgtccgtacttc 139  Q
    |||||| || ||||||| | |||||||| |||||| ||||||| |||||| |||||||||||| ||||    
T  13845536 gtgtcggtgtcggacacgagacgtgtctgacacggagacacgccttatccaaggagtgtccgtgcttc 13845469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 72
Target Start/End: Complemental strand, 49505193 - 49505154
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    ||||||||||||||||||||||||||||||| | ||||||    
T  49505193 aaaatcacataatttagtgtaattatatgtgtcagtgtcg 49505154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 145
Target Start/End: Original strand, 16789030 - 16789143
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgt 130  Q
    ||||||||| |||||| |||||||||||| |||  |||||||||||  || ||||||  |||| |||| ||||||| ||||| | | ||  |||||||||    
T  16789030 aaaaaatcatataattcagtgtaattataagtgttggtgtcgtgtcagtgtcggacatgacacatgtccaacacgg-gacacacctaatttgaggagtgt 16789128  T
Q  131 ccgtacttcgtagat 145  Q
    |||| |||| |||||    
T  16789129 ccgtgcttcatagat 16789143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 25948928 - 25948882
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcg 77  Q
    |||||||||||||||| |||||||||||| |||  ||||||||||||    
T  25948928 aaaaaatcacataattcagtgtaattataagtgttggtgtcgtgtcg 25948882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 75
Target Start/End: Original strand, 28678323 - 28678365
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgt 75  Q
    |||||||||||||||||| ||||| |||||| |||||||||||    
T  28678323 aaaatcacataatttagtataattgtatgtgtcggtgtcgtgt 28678365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 28917996 - 28918062
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtg 74  Q
    ||||||||| |||||  || || |||||||||||||||| |||||||||| | ||| ||||||||||    
T  28917996 acgccgacatagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtg 28918062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 63
Target Start/End: Complemental strand, 32804579 - 32804549
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtg 63  Q
    |||||||||||||||||||||||||||||||    
T  32804579 aaaatcacataatttagtgtaattatatgtg 32804549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 10268550 - 10268501
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaatta 57  Q
    |||||||||||| ||  || || |||||||||||||||||||||||||||    
T  10268550 acgccgacacagttaataatttgaaaaaatcacataatttagtgtaatta 10268501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 126
Target Start/End: Complemental strand, 10690301 - 10690209
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgagga 126  Q
    |||||||||||||| ||||||||||||| || |||| | || | | || ||||||| |||||||||| |||||| ||||| | | |||||||||    
T  10690301 aaaatcacataattcagtgtaattatatttgtcggtattgtttag-tgtcggacacaacacgtgtctgacacggcgacacacctaatccgagga 10690209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 14829685 - 14829753
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcg 77  Q
    ||||||||||||||| | ||||| ||||||||||||||| |  ||||||| | ||| |||||||||||||    
T  14829685 acgccgacacagcta-ataatttgaaaaatcacataattcatggtaattacaagtgtcggtgtcgtgtcg 14829753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 1e-43; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 728 - 920
Target Start/End: Original strand, 2477510 - 2477700
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 827  Q
    ||||||||| ||| ||||||||||  |||||||||||||||||| |||||||||||||| |  ||||||| |||||| ||||||||||| |||||||       
T  2477510 cgttcctacaaatctggaggctcggttctgtaagtgaaaagagacccgtaataaaataagattgtatttt-tttaaacgaacaatgttcaatttaaattt 2477608  T
Q  828 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcc 920  Q
        ||||||||||||||| ||| | ||||||||||||||||| |||| ||||||||||||||||||||||||||| ||| ||||||||||||    
T  2477609 ttt-aaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaaccaccctcc 2477700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 724 - 926
Target Start/End: Complemental strand, 20611973 - 20611774
Alignment:
Q  724 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaa 823  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||  || ||| ||||||||||||| |||| || || | ||  |||||||| ||||    
T  20611973 gggtcgttcctacgaattcggaggctcggctctgtaagtgaaaagaggcccataaaaaaataaaaacgtttttttttcaagataa--atgttctacttaa 20611876  T
Q  824 annnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaa 923  Q
    |       ||| ||||||||||| ||||||||||||| ||| ||| |||||  ||||||||||||||||||||||||||| ||| |||| ||||||| ||    
T  20611875 atttttt-aaacgataaatacaaggtgtcgtatatatacgacacatccaaaggtgaaaatcactaccgtatacatgaggaacctcaaactaccctcccaa 20611777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 732 - 900
Target Start/End: Complemental strand, 17354132 - 17353964
Alignment:
Q  732 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaa-caatgttctatttaaannnnnn 830  Q
    |||| ||||| ||||||||||||||   | ||||||||| || || ||||||| |||||||||||| ||||||| || |||||||||||||| |          
T  17354132 cctaagaattcggaggctcgactcttggaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaaaaagcaatgttctatttatatttttt 17354033  T
Q  831 naaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatga 900  Q
     |||||||||||| || |||||||||||||||| ||||||||||| ||||||| |||| |||||||||||    
T  17354032 -aaaagataaatataaggtgtcgtatatatgcggtacacccaaatgtgaaaatgactatcgtatacatga 17353964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 737 - 903
Target Start/End: Complemental strand, 33774291 - 33774124
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta--ttttatttaaaagaacaatgttctatttaaannnnnnnaaa 834  Q
    ||||| ||||||||| ||||| || |||||||||  | |||||||||| ||||| ||  |||| |||||||||  ||||||||||||| |       |||    
T  33774291 gaattcggaggctcggctctgaaaatgaaaagaggccagtaataaaatcaaaacataatttttttttaaaagagtaatgttctatttatatttttt-aaa 33774193  T
Q  835 agataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||||| ||| |||||||||||| ||||||||||| ||||||| |||||||||||||||||||    
T  33774192 agataaatacaaggtgccgtatatatgcggtacacccaaatgtgaaaatgactaccgtatacatgagga 33774124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 737 - 903
Target Start/End: Complemental strand, 21479668 - 21479501
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta--ttttatttaaaagaacaatgttctatttaaannnnnnnaaa 834  Q
    ||||||||||||||| ||||| || |||||||||  | || ||||||| ||||| ||  |||| ||||||||| |||||||||||||| |       |||    
T  21479668 gaatttggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataatttttttttaaaagagcaatgttctatttatatttttt-aaa 21479570  T
Q  835 agataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||||| ||| |||||||||||| |||||||| |  ||||||| |||||||||||||||||||    
T  21479569 agataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 21479501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 737 - 903
Target Start/End: Original strand, 13727332 - 13727498
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta-ttttatttaaaagaacaatgttctatttaaannnnnnnaaaa 835  Q
    ||||| ||||||||| ||||| || |||||||||  | || ||||||| ||||| || |||| ||||||||| |||||||||||||| |       ||||    
T  13727332 gaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctatttatatttttt-aaaa 13727430  T
Q  836 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||||||| ||| |||||||||||| |||||||| |  ||||||| |||||||||||||||||||    
T  13727431 gataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 13727498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 737 - 903
Target Start/End: Original strand, 20711653 - 20711819
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctatttaaannnnnnnaaaa 835  Q
    ||||| |||||||||  ||||  | ||||||||| || || ||||||| |||||||||||| ||| |||||| |||||||||||||| |       ||||    
T  20711653 gaattcggaggctcggttctgggaatgaaaagaggtcagtcataaaatcaaaacgtatttttttttaaaagagcaatgttctatttatatttttt-aaaa 20711751  T
Q  836 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||| || ||| |||||||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  20711752 gataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 20711819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 732 - 903
Target Start/End: Original strand, 27788618 - 27788787
Alignment:
Q  732 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnn 831  Q
    |||| ||||| ||||||||| |||||  | |||||||||  | || ||||||| |||||||||||| ||||||||| |||| ||||||||| |           
T  27788618 cctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttt-tttaaaagagcaattttctatttatatttttt- 27788715  T
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    |||||||||||| || ||| |||||||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  27788716 aaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 27788787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 16766692 - 16766823
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggt 107  Q
    |||||||||||||||  || || |||||||||||||||| |||||||||| | ||| ||||||||||||| || ||||||| |||||||||  |||| |     
T  16766692 acgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaacacgtgtccgacaccgg 16766791  T
Q  108 gacacgctttatccgaggagtgtccgtacttc 139  Q
    ||||||| | |||||| || ||||||| ||||    
T  16766792 gacacgcctaatccgaagaatgtccgtgcttc 16766823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 28 - 139
Target Start/End: Original strand, 18367851 - 18367962
Alignment:
Q  28 tttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggag 127  Q
    |||| ||||||||| |||  |||||||||||||||| ||||||||||||| || | ||||| |||| ||||| |||||| ||||||| |||||| |||||    
T  18367851 tttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcagacacgacacatgtctgacacggggacacgccttatccaaggag 18367950  T
Q  128 tgtccgtacttc 139  Q
    ||||||| ||||    
T  18367951 tgtccgtgcttc 18367962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 832 - 932
Target Start/End: Original strand, 21183703 - 21183805
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcc--aaaaaacat 929  Q
    ||||||||||||||| ||  |||||||||| | ||||||||||  ||||||||||||||||||||||||||| ||| ||||||||| ||  |||||||||    
T  21183703 aaaagataaatacaaagtagcgtatatatgtggtacacccaaagttgaaaatcactaccgtatacatgaggaacctcaaaccacccacccaaaaaaacat 21183802  T
Q  930 cca 932  Q
    |||    
T  21183803 cca 21183805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 778 - 918
Target Start/End: Complemental strand, 6159568 - 6159430
Alignment:
Q  778 ataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatat 877  Q
    ||||||||||||| |||||| |||||  ||||||||||||||||| |       |||||||||||||||||||||||||||||||| ||||  ||||  |    
T  6159568 ataaaataaaaacatattttttttaat-gaacaatgttctatttatatttttt-aaaagataaatacaatgtgtcgtatatatgcggtacattcaaaggt 6159471  T
Q  878 gaaaatcactaccgtatacatgaggatccttaaaccaccct 918  Q
    | |||||||||||||||| || |||| ||| ||||||||||    
T  6159470 ggaaatcactaccgtatatataaggaacctcaaaccaccct 6159430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 738 - 869
Target Start/End: Original strand, 27314113 - 27314244
Alignment:
Q  738 aatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaaga 837  Q
    |||| |||||||||||||||  | |||||||||  | || ||||||| |||||||||||| ||||||||| |||||||||||||| |       ||||||    
T  27314113 aattcggaggctcgactctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatattttttaaaaaga 27314212  T
Q  838 taaatacaatgtgtcgtatatatgcgatacac 869  Q
    ||||||||| ||| |||||||||||| |||||    
T  27314213 taaatacaaggtgccgtatatatgcggtacac 27314244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 737 - 903
Target Start/End: Complemental strand, 21280718 - 21280552
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta-ttttatttaaaagaacaatgttctatttaaannnnnnnaaaa 835  Q
    ||||| ||||||||| ||||| || |||||||||  | || ||||||| ||||| || |||| ||||||||| |||||||||||||| |       ||||    
T  21280718 gaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctatttatatttttt-aaaa 21280620  T
Q  836 gataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||||||| ||| |||||||||||| |||||||| |  | ||||| |||||||||||||||||||    
T  21280619 gataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagga 21280552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 731 - 903
Target Start/End: Complemental strand, 28075965 - 28075790
Alignment:
Q  731 tcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattta----aaagaacaatgttctatttaaann 826  Q
    ||||| ||||||||||||||| |||||  | |||||||||  | || | ||||| |||||||||||| ||||    ||| | |||||||||||||| |      
T  28075965 tcctaagaatttggaggctcggctctgggaatgaaaagaggccagtgaaaaaatcaaaacgtattttttttattttaaaaagcaatgttctatttatatt 28075866  T
Q  827 nnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
         |||||||||||| || ||| |||||||||||||||||||||||  ||||||| |||||||||||||||||||    
T  28075865 tttt-aaaagataaatataaggtgccgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgagga 28075790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 16488634 - 16488523
Alignment:
Q  28 tttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggag 127  Q
    |||| ||||||||| |||  |||||||||||||||| ||||||||||||| || ||||||| ||||||||||  ||||| ||||||| |||||| ||||     
T  16488634 tttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtctggcacggggacacgccttatccaaggaa 16488535  T
Q  128 tgtccgtacttc 139  Q
    ||| ||| ||||    
T  16488534 tgttcgtgcttc 16488523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 728 - 889
Target Start/End: Complemental strand, 30121941 - 30121783
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 827  Q
    ||||| ||||||| |||||| | | |||| |||||||||| ||   |||||||||||||||  || |||| ||| ||||||||||||| ||||||||       
T  30121941 cgttcatacgaatatggaggttgggctctataagtgaaaataggctcgtaataaaataaaa--gtgtttttttttaaagaacaatgttttatttaaattt 30121844  T
Q  828 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactac 889  Q
        |||| |||||||||| ||||| ||||||||||||||| |||||  |||||||||||||    
T  30121843 tttaaaaa-ataaatacaaggtgtcatatatatgcgatacatccaaaggtgaaaatcactac 30121783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 139
Target Start/End: Complemental strand, 17327694 - 17327594
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgtcc 132  Q
    |||||||||||||||||||||| |||||||| | |||||||||      ||||||| |||||||||| |||| | ||||||| | |||||||||||||||    
T  17327694 aaaatcacataatttagtgtaactatatgtgtcagtgtcgtgt------cggacacgacacgtgtctgacacagggacacgcctaatccgaggagtgtcc 17327601  T
Q  133 gtacttc 139  Q
    || ||||    
T  17327600 gtgcttc 17327594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 778 - 903
Target Start/End: Complemental strand, 34397988 - 34397864
Alignment:
Q  778 ataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatat 877  Q
    ||||||| |||||||||||| ||||||||| |||||||||||||| |       ||||||||||||||| ||| |||||||||||| |||||| |||  |    
T  34397988 ataaaatcaaaacgtattttttttaaaagagcaatgttctatttata-ttttttaaaagataaatacaaggtgacgtatatatgcggtacacctaaaggt 34397890  T
Q  878 gaaaatcactaccgtatacatgagga 903  Q
     ||||| |||| |||| |||||||||    
T  34397889 aaaaatgactatcgtaaacatgagga 34397864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 9107434 - 9107296
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggt 107  Q
    |||||||||||||||  || || ||||||||||| |||| |||||||||| | ||| ||||||||||||| || ||||||| ||  |||||  |||| |     
T  9107434 acgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaacgtgtgtccgacaccgg 9107335  T
Q  108 gacacgctttatccgaggagtgtccgtacttcgtagatg 146  Q
    ||||| | | |||||||||||| |||| |||| ||||||    
T  9107334 gacacacctaatccgaggagtgcccgtgcttcatagatg 9107296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 778 - 903
Target Start/End: Original strand, 19737667 - 19737791
Alignment:
Q  778 ataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatat 877  Q
    ||||||| |||| || |||| ||||||||| |||||||||||||| |       ||| ||||||||||| ||| |||||||||||| |||||| | |  |    
T  19737667 ataaaatcaaaatgttttttttttaaaagagcaatgttctatttatatttttttaaa-gataaatacaaggtgccgtatatatgcggtacacctagaggt 19737765  T
Q  878 gaaaatcactaccgtatacatgagga 903  Q
    |||||| |||||||||||||||||||    
T  19737766 gaaaatgactaccgtatacatgagga 19737791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 835 - 926
Target Start/End: Complemental strand, 4037023 - 4036932
Alignment:
Q  835 agataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaa 926  Q
    |||||||||||| ||| |||||||||  | ||||||||||  | || |||||||||||||| ||||||| | | ||||||||||||||||||    
T  4037023 agataaatacaaggtgccgtatatatatggtacacccaaaggtaaagatcactaccgtatatatgaggaacttcaaaccaccctccaaaaaa 4036932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 8365583 - 8365452
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggt 107  Q
    ||||||||||| |||  || || |||| |||||||||||  ||||||||| | ||| ||||||||||||| |  ||||||| |||||||||  |||| |     
T  8365583 acgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgtccgacactgg 8365484  T
Q  108 gacacgctttatccgaggagtgtccgtacttc 139  Q
    ||||||| | ||||||||||| ||||| ||||    
T  8365483 gacacgcctaatccgaggagtctccgtgcttc 8365452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 832 - 902
Target Start/End: Original strand, 1155877 - 1155947
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagg 902  Q
    ||||||||||||||| ||||| |||||||||| |||| ||| |  ||||||| ||||||||||||||||||    
T  1155877 aaaagataaatacaaggtgtcatatatatgcggtacatccagaggtgaaaatgactaccgtatacatgagg 1155947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 26562684 - 26562753
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcg 77  Q
    |||||||||| |||| ||| || | |||||||||||||| |||||||||||||||| || ||||||||||    
T  26562684 acgccgacactgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcgtgtcg 26562753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 724 - 793
Target Start/End: Original strand, 27131120 - 27131189
Alignment:
Q  724 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgta 793  Q
    |||||||||| ||||||   ||||||| ||||| ||| |||||||||||| |||||||||||||||||||    
T  27131120 gggtcgttccaacgaatccagaggctcaactctataaatgaaaagagatctgtaataaaataaaaacgta 27131189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 17841653 - 17841589
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    |||||||||||||||  || || ||||||||||||||||||||||||||| | ||| ||||||||    
T  17841653 acgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgacggtgtcg 17841589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 76
Target Start/End: Original strand, 7086815 - 7086858
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtc 76  Q
    ||||||||||||||||||||||||||||||| |||||| |||||    
T  7086815 aaaatcacataatttagtgtaattatatgtgtcggtgtagtgtc 7086858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 7938111 - 7938174
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtc 71  Q
    |||||||||||||||  || || ||||||||| ||||||||||||||||||| ||| |||||||    
T  7938111 acgccgacacagctaataatttgaaaaaatcatataatttagtgtaattataagtgtcggtgtc 7938174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 76
Target Start/End: Complemental strand, 9025533 - 9025490
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtc 76  Q
    |||||||||||||| |||||||||||||||| ||||||||||||    
T  9025533 aaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtc 9025490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 139
Target Start/End: Complemental strand, 10339165 - 10339058
Alignment:
Q  33 aaaatcacataatttagtgt-aattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgtc 131  Q
    |||||||||||||| ||||| ||||||||||| | ||| ||||||| || ||||||| |||| ||||  |||| | ||||||| | ||| ||||||||||    
T  10339165 aaaatcacataattcagtgttaattatatgtgtcagtgccgtgtcggtgtcggacacgacacatgtccgacactgggacacgcctaatcggaggagtgtc 10339066  T
Q  132 cgtacttc 139  Q
    ||| ||||    
T  10339065 cgtgcttc 10339058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 832 - 903
Target Start/End: Original strand, 24711027 - 24711098
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||||||||||| ||| |||||||||| | ||||| || |  ||||||| |||||||||||||||||||    
T  24711027 aaaagataaatacaaggtgccgtatatatgtggtacactcagaggtgaaaatgactaccgtatacatgagga 24711098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 728 - 815
Target Start/End: Complemental strand, 27994936 - 27994850
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgtt 815  Q
    |||||||||||||  ||| ||||| ||||||||| ||||| |    |||||||||||||||||||||||| ||||| |||||||||||    
T  27994936 cgttcctacgaatccggaagctcggctctgtaagcgaaaataagctcgtaataaaataaaaacgtatttt-tttaagagaacaatgtt 27994850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 75
Target Start/End: Complemental strand, 9195793 - 9195751
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgt 75  Q
    ||||| ||||||||||||||||||||||||| |||||||||||    
T  9195793 aaaatgacataatttagtgtaattatatgtgtcggtgtcgtgt 9195751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 7027260 - 7027301
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    |||||||||||||||| |||||||||||||||| ||||||||    
T  7027260 aaaaaatcacataattcagtgtaattatatgtgtcggtgtcg 7027301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 8931666 - 8931597
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcg 77  Q
    ||||||||||||||| ||| || | ||||| |||||||| ||| |||||||||||| || ||||||||||    
T  8931666 acgccgacacagctaaaaatttgagaaaataacataattcagtataattatatgtgtcgatgtcgtgtcg 8931597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 132
Target Start/End: Original strand, 9629403 - 9629502
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtc-gtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgtc 131  Q
    |||||||||||||| | |||||||||||||| ||||||| |||||| || ||||||| ||| |||||  |||| | ||||||  | ||||||||||||||    
T  9629403 aaaatcacataattcaatgtaattatatgtgtcggtgtcggtgtcg-tgtcggacacaacatgtgtccgacactgagacacgtctaatccgaggagtgtc 9629501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 12696319 - 12696436
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggt 107  Q
    |||||||||||||||  || || ||||||| |||||||| |||||||||| | ||| | |||||||||      ||||||| |||||||||| |||| |     
T  12696319 acgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcagtgtcgtgt------cggacacgacacgtgtctgacaccgg 12696412  T
Q  108 gacacgctttatccgaggagtgtc 131  Q
    ||||| | |||||| |||||||||    
T  12696413 gacacaccttatccaaggagtgtc 12696436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 139
Target Start/End: Original strand, 31384938 - 31385045
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgt 130  Q
    |||||||||||||||| |||||||||| | ||| | ||||||||| | ||  |||||| |||||||||  |||| | ||||||| | |||| ||||||||    
T  31384938 aaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtag-tgttggacacgacacgtgtcctacaccgggacacgcctaatccaaggagtgt 31385036  T
Q  131 ccgtacttc 139  Q
    |||| ||||    
T  31385037 ccgtgcttc 31385045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 33001353 - 33001289
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    |||||||||| ||||  || || |||||||||||||||| | |||||||||||||| ||||||||    
T  33001353 acgccgacactgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcggtgtcg 33001289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 3398614 - 3398680
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgt 75  Q
    ||||||||||||||| | ||||| |||||||| |||||| |||||||||||| ||  |||||||||||    
T  3398614 acgccgacacagcta-ataatttgaaaaatcatataattcagtgtaattataagtatcggtgtcgtgt 3398680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 72
Target Start/End: Complemental strand, 5732549 - 5732510
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  5732549 aaaatcacatattttagtgtaattatatgtgtcggtgtcg 5732510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 7151430 - 7151473
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcgtg 74  Q
    |||||||||||||||| ||||||||||||||||  |||||||||    
T  7151430 aaaaaatcacataattaagtgtaattatatgtgttggtgtcgtg 7151473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 72
Target Start/End: Complemental strand, 7265632 - 7265593
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  7265632 aaaatcacataattcagtgtaattatatgtgtcggtgtcg 7265593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 10842527 - 10842582
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtg 63  Q
    |||||||||| ||||  || || ||||||||||||||||||||||||| |||||||    
T  10842527 acgccgacaccgctaataatttgaaaaaatcacataatttagtgtaatcatatgtg 10842582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 742 - 823
Target Start/End: Complemental strand, 4037604 - 4037524
Alignment:
Q  742 tggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaa 823  Q
    |||||||| | ||| |||||||| |||||  || | |||||||||||| ||||||| ||| |||||| ||||||||||||||    
T  4037604 tggaggctaggctccgtaagtgataagagggccatgataaaataaaaatgtatttt-ttttaaagaataatgttctatttaa 4037524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 139
Target Start/End: Original strand, 7248379 - 7248484
Alignment:
Q  34 aaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgtccg 133  Q
    ||||||||||||| || |||||||||||||  || ||||||||| ||  |||||| ||| |||||  |||| | ||||||    ||||||||||||||||    
T  7248379 aaatcacataattcagggtaattatatgtgttggagtcgtgtcggtgttggacacaacatgtgtccgacaccgggacacgtcaaatccgaggagtgtccg 7248478  T
Q  134 tacttc 139  Q
    | ||||    
T  7248479 tgcttc 7248484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 7377977 - 7378038
Alignment:
Q  11 ccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcg 72  Q
    ||||||| |||| ||| || | |||||||||||||| | |||||||||||||| ||||||||    
T  7377977 ccgacaccgctaaaaatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcg 7378038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 76
Target Start/End: Original strand, 9027200 - 9027241
Alignment:
Q  35 aatcacataatttagtgtaattatatgtgccggtgtcgtgtc 76  Q
    ||||||||||||  ||||||||||||||| ||||||||||||    
T  9027200 aatcacataattccgtgtaattatatgtgtcggtgtcgtgtc 9027241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 10770715 - 10770670
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtc 76  Q
    |||||||||||||||| |||||||||| | ||| ||||||||||||    
T  10770715 aaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtc 10770670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 26178720 - 26178683
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgt 70  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  26178720 aaaatcacataatttagtgtaatcatatgtgtcggtgt 26178683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 145
Target Start/End: Original strand, 34595182 - 34595255
Alignment:
Q  72 gtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgtccgtacttcgtagat 145  Q
    |||||| || ||||||| |||||||||| |||| | ||||| | | ||||||||||||||||| |||| |||||    
T  34595182 gtgtcggtgtcggacacgacacgtgtctgacaccgggacacacctaatccgaggagtgtccgtgcttcatagat 34595255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 78; Significance: 8e-36; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 753 - 912
Target Start/End: Original strand, 206439 - 206597
Alignment:
Q  753 ctctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaagataaatacaatgtgtc 852  Q
    |||||||||||||||||| |  ||||||||||||||| ||||||| ||| |||||| |||||||||||||||       ||||||||||||||| |||||    
T  206439 ctctgtaagtgaaaagaggtttgtaataaaataaaaatgtatttttttttaaagaagaatgttctatttaaattttgt-aaaagataaatacaaggtgtc 206537  T
Q  853 gtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaac 912  Q
    ||||||||||| |||||||||   ||||||||||||||||||||||||||| ||| ||||    
T  206538 gtatatatgcggtacacccaatggtgaaaatcactaccgtatacatgaggaacctcaaac 206597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 70; Significance: 5e-31; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 728 - 926
Target Start/End: Original strand, 230786 - 230981
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 827  Q
    |||||||||||||  ||| |||||  |||||||| ||||||||  |||||||||||  |||| |||| || ||||||||||||||||||||||||||       
T  230786 cgttcctacgaatccggaagctcggatctgtaagggaaaagaggcccgtaataaaa--aaaatgtatattttttaaaagaacaatgttctatttaaattt 230883  T
Q  828 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaa 926  Q
        |||||||||||  || |||| |||||||||||||| |||||||  |||||||||||||| |||||||||||| | | |||||||||||| |||||    
T  230884 gtt-aaaagataaatttaaggtgttgtatatatgcgatatacccaaaggtgaaaatcactaccttatacatgaggaacttcaaaccaccctcccaaaaa 230981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 67; Significance: 3e-29; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 732 - 903
Target Start/End: Complemental strand, 106713 - 106542
Alignment:
Q  732 cctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctatttaaannnnnn 830  Q
    |||| ||||||||||||||| |||||  | |||||||||  | || ||||||| |||||||||||| ||| ||||||||||||||||||||| |          
T  106713 cctaagaatttggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttttaaaagaacaatgttctatttatatttttt 106614  T
Q  831 naaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
     |||||||||||| || |||||||||||||||| ||||||||||  ||||||| |||||||||||||||||||    
T  106613 -aaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagga 106542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 85037 - 84947
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtc 98  Q
    ||||||||||  |||| || || | ||||||| ||||||  |||||||||||| || ||||||| |||||||| || |||| |||||||||    
T  85037 acgccgacaccactactaatttaagaaaatcatataattatgtgtaattatatatgtcggtgtcatgtcgatgtcgaacacaacacgtgtc 84947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 61; Significance: 1e-25; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 737 - 903
Target Start/End: Complemental strand, 1512 - 1347
Alignment:
Q  737 gaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannnnnnnaaaag 836  Q
    ||||| ||||||||| |||||  | ||||||||| || || ||||||| |||||||||||| ||||||||| || ||||||||||| |       |||||    
T  1512 gaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagcactgttctatttatatttttt-aaaag 1414  T
Q  837 ataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgagga 903  Q
    ||||||||||  || |||||||||||| |||||||| | |||||||| |||||||||||||||||||    
T  1413 ataaatacaagctgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgagga 1347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 57; Significance: 3e-23; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 728 - 932
Target Start/End: Original strand, 23925 - 24122
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 827  Q
    ||||||||||||||||||||||||  ||| |||||||||||||   | |||||||| | |||   |||||     |||||||||| |||||||||||       
T  23925 cgttcctacgaatttggaggctcggttctctaagtgaaaagaggctcataataaaaaataaa---attttt----aaagaacaatattctatttaaattt 24017  T
Q  828 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccct-ccaaaaaa 926  Q
        ||||||||||||||| |||||||||||||||| ||||||||||  ||||||||| |||||||| ||| ||||  || |||||||||| ||||||||    
T  24018 ttt-aaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatcattaccgtatgcataaggaatctcaaaccaccctcccaaaaaa 24116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 56; Significance: 1e-22; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 724 - 926
Target Start/End: Complemental strand, 40270 - 40066
Alignment:
Q  724 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctattta 822  Q
    |||||| ||||  |||| |||||| ||  |||||||||||||||||| | |||||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  40270 gggtcgatcctgtgaatctggaggttctgctctgtaagtgaaaagaggttcgtaataaaataaaaatgtattttttttaaaaagaacaatgttctattta 40171  T
Q  823 a-annnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcca 921  Q
    |         ||||||||||||||| ||| ||||| ||||   ||||||| ||  |||||||||| | |||||||||||| | ||| |||||||| |||     
T  40170 atttttttttaaaagataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatgagcaacctcaaaccaccgtccc 40071  T
Q  922 aaaaa 926  Q
    |||||    
T  40070 aaaaa 40066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 724 - 926
Target Start/End: Complemental strand, 138330 - 138126
Alignment:
Q  724 gggtcgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttattt-aaaagaacaatgttctattta 822  Q
    |||||| ||||  |||| |||||| ||  |||||||||||||||||| | |||||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  138330 gggtcgatcctgtgaatctggaggttctgctctgtaagtgaaaagaggttcgtaataaaataaaaatgtattttttttaaaaagaacaatgttctattta 138231  T
Q  823 a-annnnnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcca 921  Q
    |         ||||||||||||||| ||| ||||| ||||   ||||||| ||  |||||||||| | |||||||||||| | ||| |||||||| |||     
T  138230 atttttttttaaaagataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatgagcaacctcaaaccaccgtccc 138131  T
Q  922 aaaaa 926  Q
    |||||    
T  138130 aaaaa 138126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 54; Significance: 2e-21; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 241589 - 241726
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggt 107  Q
    |||||||||||||||  || ||  |||||||||||||||||||||||||||  ||| ||||||||||| | || ||||||| |||||||||  |||| |     
T  241589 acgccgacacagctaataatttggaaaaatcacataatttagtgtaattatgagtgtcggtgtcgtgttggtgtcggacacgacacgtgtccgacaccgg 241688  T
Q  108 gacacgctttatccgaggagtgtccgtacttcgtagat 145  Q
    ||||||| | ||||||| ||||||||| |||| |||||    
T  241689 gacacgcctaatccgagaagtgtccgtgcttcatagat 241726  T

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Target: scaffold0003; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 728 - 915
Target Start/End: Original strand, 351260 - 351445
Alignment:
Q  728 cgttcctacgaatttggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaannn 827  Q
    |||||| || ||| |||||||||  ||||||| ||||||| |   ||||||||||||||||| || |||| ||  || || ||||||||||||||||       
T  351260 cgttccgacaaatctggaggctcagctctgtatgtgaaaaaatgcccgtaataaaataaaaatgttttttttt--aatgatcaatgttctatttaaaaaa 351357  T
Q  828 nnnnaaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccac 915  Q
        ||||||||||||||| ||||||||||||||   ||||||||||  |||||||| |||| | ||||| ||||  ||| |||||||    
T  351358 aattaaaagataaatacaaggtgtcgtatatatgttgtacacccaaaggtgaaaatcgctactgaatacacgaggtacctcaaaccac 351445  T

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Target: scaffold0902 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0902
Description:

Target: scaffold0902; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 744 - 824
Target Start/End: Original strand, 4404 - 4484
Alignment:
Q  744 gaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaa 824  Q
    |||||||| ||||| ||||||| ||||  ||||||||||||||||| |||||||  |||||||||||||||||||||||||    
T  4404 gaggctcggctctgcaagtgaatagaggcccgtaataaaataaaaatgtatttttattaaaagaacaatgttctatttaaa 4484  T

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Target: scaffold0018 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 832 - 920
Target Start/End: Original strand, 173538 - 173626
Alignment:
Q  832 aaaagataaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctcc 920  Q
    ||||||||||||||| ||  |||||||||||||||||||||||  | |||||||||||||||||| |||||| ||| |||||| |||||    
T  173538 aaaagataaatacaaggtaccgtatatatgcgatacacccaaaggtaaaaatcactaccgtatacgtgaggaacctcaaaccatcctcc 173626  T

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Target: scaffold0623 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 28 - 134
Target Start/End: Complemental strand, 6040 - 5934
Alignment:
Q  28 tttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggag 127  Q
    |||| ||||||||| |||  |||||||||||||||| ||||||||| ||| || || |||| |||||||||| |||| | ||||||| |||||| |||||    
T  6040 tttagaaaatcacaaaatgcagtgtaattatatgtgtcggtgtcgtatcggtgtcgaacacgacacgtgtctgacacagagacacgccttatccaaggag 5941  T
Q  128 tgtccgt 134  Q
    |||||||    
T  5940 tgtccgt 5934  T

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Target: scaffold0227 (Bit Score: 46; Significance: 9e-17; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 839 - 928
Target Start/End: Complemental strand, 16095 - 16006
Alignment:
Q  839 aaatacaatgtgtcgtatatatgcgatacacccaaatatgaaaatcactaccgtatacatgaggatccttaaaccaccctccaaaaaaca 928  Q
    ||||||||  |||||||| |||||| |||| ||||| |||||||||||||||||||||||||| | ||| ||||||||||  ||||||||    
T  16095 aaatacaagatgtcgtatgtatgcggtacatccaaagatgaaaatcactaccgtatacatgagaaacctcaaaccaccctaaaaaaaaca 16006  T

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Target: scaffold0227; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 743 - 824
Target Start/End: Complemental strand, 16228 - 16147
Alignment:
Q  743 ggaggctcgactctgtaagtgaaaagagatccgtaataaaataaaaacgtattttatttaaaagaacaatgttctatttaaa 824  Q
    ||||||||||||||||||||||||| |  || ||||||||||||||||||||||  ||| |||||  |||||||||||||||    
T  16228 ggaggctcgactctgtaagtgaaaaaaattctgtaataaaataaaaacgtatttctttttaaagagaaatgttctatttaaa 16147  T

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Target: scaffold0036 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 139
Target Start/End: Complemental strand, 9786 - 9680
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgtcc 132  Q
    |||||||| ||||| |||||||||||||||| ||||||||||| | || | ||||| |||| ||||| |||  | ||||||  | |||||||||||||||    
T  9786 aaaatcacttaattcagtgtaattatatgtgtcggtgtcgtgttggtgtcagacacgacacttgtctgacatcgggacacgtataatccgaggagtgtcc 9687  T
Q  133 gtacttc 139  Q
    || ||||    
T  9686 gtgcttc 9680  T

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Target: scaffold0123 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 44564 - 44499
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtc 98  Q
    |||||||||||||| |||||||||||||||| |||| |||||||| ||  |||||| |||||||||    
T  44564 aaaatcacataattcagtgtaattatatgtgtcggtatcgtgtcggtgttggacacaacacgtgtc 44499  T

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Target: scaffold0044 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 134
Target Start/End: Original strand, 53200 - 53301
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgtcc 132  Q
    |||||||||||||| |||||||||||| ||| ||||| ||||||| || ||||||  |||||||||  |||| | |||||| || |||| || |||||||    
T  53200 aaaatcacataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatgacacgtgtccgacaccgggacacgtttaatccaagaagtgtcc 53299  T
Q  133 gt 134  Q
    ||    
T  53300 gt 53301  T

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Target: scaffold0236 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 75
Target Start/End: Complemental strand, 25807 - 25765
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgt 75  Q
    ||||||||||||||||||||||||||| ||| |||||||||||    
T  25807 aaaatcacataatttagtgtaattataagtgtcggtgtcgtgt 25765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 23438 - 23484
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcg 77  Q
    |||||||||||||||| |||||||||||| ||| |||||||||||||    
T  23438 aaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcg 23484  T

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Target: scaffold0171; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 23529 - 23586
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacac 88  Q
    |||||||||||||||| |||||||||||| ||| | ||||||| ||| || |||||||    
T  23529 aaaaaatcacataattcagtgtaattataagtgtcagtgtcgtttcggtgtcggacac 23586  T

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Target: scaffold0223 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 20167 - 20236
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcg 77  Q
    |||||||||||||||  || || |||||||||||||||| |||||||||| | ||| | |||||||||||    
T  20167 acgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcg 20236  T

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Target: scaffold0136 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 132
Target Start/End: Complemental strand, 3890 - 3789
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgt 130  Q
    |||||||||||||||| |||||||||| | ||| | ||||||||| | || ||||||| |||| ||||  |||  | ||||||| | |||||||||||||    
T  3890 aaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgttggtgtcggacacgacacatgtccgacatcgagacacgcctaatccgaggagtgt 3791  T
Q  131 cc 132  Q
    ||    
T  3790 cc 3789  T

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Target: scaffold0019 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 131
Target Start/End: Original strand, 71743 - 71843
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgt 130  Q
    ||||||||||| |||| ||||||||||   ||| | ||||||||||| || ||||||| |||||||||  |||| | ||||||  | |||||||||||||    
T  71743 aaaaaatcacacaattcagtgtaattactagtgtcagtgtcgtgtcggtgtcggacacaacacgtgtccgacaccgggacacgactaatccgaggagtgt 71842  T
Q  131 c 131  Q
    |    
T  71843 c 71843  T

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Target: scaffold0086 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 2946 - 3049
Alignment:
Q  31 aaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgtctaacacggtgacacgctttatccgaggagtgt 130  Q
    ||||||||||||||||||||||||||| | ||  | ||||||||||| |  | ||||| ||||||||   |||| |  |||||| | |||||||||||||    
T  2946 aaaaaatcacataatttagtgtaattacaagtatcagtgtcgtgtcggtatcagacacgacacgtgttcgacaccggaacacgcctaatccgaggagtgt 3045  T
Q  131 ccgt 134  Q
    ||||    
T  3046 ccgt 3049  T

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Target: scaffold0020 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 76
Target Start/End: Complemental strand, 135351 - 135308
Alignment:
Q  33 aaaatcacataatttagtgtaattatatgtgccggtgtcgtgtc 76  Q
    ||||||||||||||  ||||||||||||||| ||||||||||||    
T  135351 aaaatcacataattctgtgtaattatatgtgtcggtgtcgtgtc 135308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 24023 - 24108
Alignment:
Q  11 ccgacacagctacaaaatttaaaaaatcacataatttagtgtaattatatgtgccggtgtcgtgtcgatgccggacaccacacgtgt 97  Q
    ||||||||||||  || ||| ||||||| |||||||||||||||||| | ||  | ||||||||||| || ||||||| ||||||||    
T  24023 ccgacacagctaataattttcaaaaatctcataatttagtgtaattaca-gtttcagtgtcgtgtcggtgtcggacacaacacgtgt 24108  T

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Target: scaffold0103 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 51806 - 51855
Alignment:
Q  8 acgccgacacagctacaaaatttaaaaaatcacataatttagtgtaatta 57  Q
    |||||||||||||||  || || |||||||||||||||| ||||||||||    
T  51806 acgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 51855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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