View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4758-Insertion-3 (Length: 795)

Name: NF4758-Insertion-3
Description: NF4758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4758-Insertion-3
NF4758-Insertion-3
[»] chr1 (71 HSPs)
chr1 (8-341)||(48984961-48985302)
chr1 (578-795)||(48985539-48985750)
chr1 (124-335)||(35949542-35949753)
chr1 (147-335)||(31646242-31646428)
chr1 (148-334)||(48662636-48662822)
chr1 (123-335)||(29426254-29426467)
chr1 (150-335)||(48796518-48796703)
chr1 (385-497)||(48985347-48985459)
chr1 (147-334)||(20414946-20415132)
chr1 (147-236)||(47662253-47662342)
chr1 (145-334)||(50099789-50099976)
chr1 (145-236)||(39026717-39026808)
chr1 (147-251)||(44327955-44328059)
chr1 (147-334)||(19996620-19996805)
chr1 (147-334)||(4893236-4893422)
chr1 (144-334)||(25059076-25059264)
chr1 (147-334)||(29185065-29185251)
chr1 (147-252)||(28220946-28221051)
chr1 (144-244)||(19506358-19506458)
chr1 (395-494)||(50100026-50100126)
chr1 (147-334)||(610688-610873)
chr1 (155-244)||(29054638-29054727)
chr1 (597-750)||(32133882-32134032)
chr1 (147-334)||(33362839-33363025)
chr1 (147-236)||(35739052-35739141)
chr1 (147-244)||(42069150-42069247)
chr1 (147-239)||(13312711-13312803)
chr1 (123-211)||(28192547-28192635)
chr1 (144-236)||(48514407-48514499)
chr1 (148-239)||(9222222-9222313)
chr1 (156-335)||(22580016-22580187)
chr1 (150-239)||(25815364-25815453)
chr1 (606-750)||(35738552-35738693)
chr1 (155-237)||(945466-945548)
chr1 (159-335)||(2501563-2501737)
chr1 (147-237)||(30489644-30489734)
chr1 (155-319)||(30622959-30623120)
chr1 (396-469)||(32133686-32133760)
chr1 (123-237)||(33794441-33794555)
chr1 (396-469)||(35738824-35738898)
chr1 (159-237)||(35978549-35978627)
chr1 (396-469)||(39026959-39027033)
chr1 (155-244)||(48964406-48964495)
chr1 (144-244)||(2978394-2978494)
chr1 (263-335)||(8981508-8981580)
chr1 (606-750)||(39027144-39027285)
chr1 (263-334)||(3821219-3821290)
chr1 (155-218)||(40094568-40094631)
chr1 (158-244)||(32835543-32835629)
chr1 (612-714)||(48514861-48514961)
chr1 (148-228)||(2433240-2433321)
chr1 (405-469)||(7121227-7121292)
chr1 (262-327)||(40094471-40094536)
chr1 (144-244)||(2975277-2975377)
chr1 (155-236)||(14106306-14106384)
chr1 (149-244)||(43634672-43634766)
chr1 (618-709)||(47665778-47665868)
chr1 (405-469)||(48514660-48514725)
chr1 (150-237)||(14589856-14589943)
chr1 (396-469)||(28192308-28192382)
chr1 (147-244)||(424549-424646)
chr1 (612-649)||(4892972-4893009)
chr1 (155-244)||(7842552-7842641)
chr1 (612-649)||(20415358-20415395)
chr1 (612-649)||(29185478-29185515)
chr1 (612-649)||(33362575-33362612)
chr1 (618-750)||(28192036-28192165)
chr1 (148-216)||(31107709-31107777)
chr1 (147-219)||(38491397-38491469)
chr1 (414-469)||(47665579-47665635)
chr1 (123-153)||(4052501-4052531)
[»] chr4 (75 HSPs)
chr4 (112-334)||(22829691-22829912)
chr4 (124-333)||(31713571-31713780)
chr4 (147-315)||(22306756-22306925)
chr4 (117-334)||(31786366-31786589)
chr4 (112-334)||(22247813-22248035)
chr4 (147-251)||(52595533-52595637)
chr4 (148-335)||(29405808-29405994)
chr4 (147-236)||(8805959-8806048)
chr4 (147-244)||(11034684-11034781)
chr4 (123-239)||(44293027-44293144)
chr4 (147-333)||(45097550-45097736)
chr4 (606-750)||(26337198-26337339)
chr4 (147-334)||(52802201-52802387)
chr4 (147-334)||(53140599-53140785)
chr4 (147-236)||(1758013-1758102)
chr4 (147-244)||(3387241-3387338)
chr4 (201-335)||(7262054-7262187)
chr4 (147-236)||(26340264-26340353)
chr4 (147-251)||(2224975-2225079)
chr4 (147-239)||(29149046-29149138)
chr4 (147-251)||(42755329-42755433)
chr4 (128-219)||(21297323-21297414)
chr4 (147-244)||(21075818-21075915)
chr4 (392-488)||(41780870-41780967)
chr4 (147-239)||(32655552-32655644)
chr4 (148-236)||(39804260-39804347)
chr4 (147-239)||(42053298-42053390)
chr4 (147-239)||(52180808-52180900)
chr4 (155-334)||(56445097-56445277)
chr4 (147-334)||(33733366-33733550)
chr4 (147-244)||(12185767-12185864)
chr4 (147-244)||(12187759-12187856)
chr4 (211-334)||(23349330-23349455)
chr4 (147-236)||(28234206-28234294)
chr4 (261-334)||(41780746-41780819)
chr4 (144-334)||(46080703-46080893)
chr4 (150-244)||(2721258-2721352)
chr4 (261-335)||(27790987-27791061)
chr4 (144-334)||(33983122-33983310)
chr4 (147-244)||(14576780-14576877)
chr4 (403-469)||(26340039-26340106)
chr4 (396-474)||(28233977-28234056)
chr4 (396-474)||(39804497-39804576)
chr4 (144-251)||(41003305-41003412)
chr4 (396-469)||(8805735-8805809)
chr4 (147-237)||(51806963-51807053)
chr4 (147-252)||(22313372-22313477)
chr4 (613-714)||(28233746-28233845)
chr4 (161-226)||(41780659-41780724)
chr4 (618-750)||(39804702-39804831)
chr4 (163-239)||(54979176-54979252)
chr4 (147-334)||(34459568-34459753)
chr4 (396-466)||(52014007-52014078)
chr4 (294-332)||(8644170-8644208)
chr4 (597-722)||(41781074-41781198)
chr4 (147-251)||(652233-652337)
chr4 (147-219)||(23147402-23147474)
chr4 (148-244)||(29994309-29994405)
chr4 (145-224)||(24486558-24486637)
chr4 (396-470)||(56444972-56445047)
chr4 (294-332)||(8614679-8614717)
chr4 (163-216)||(9930443-9930495)
chr4 (612-649)||(22248262-22248299)
chr4 (612-649)||(53141012-53141049)
chr4 (155-195)||(2073686-2073726)
chr4 (619-655)||(21297046-21297082)
chr4 (155-239)||(25938361-25938445)
chr4 (147-251)||(38000580-38000684)
chr4 (153-237)||(55760286-55760370)
chr4 (201-244)||(3094992-3095035)
chr4 (114-181)||(23349476-23349543)
chr4 (614-649)||(52801937-52801972)
chr4 (155-237)||(14595296-14595378)
chr4 (612-649)||(29405551-29405588)
chr4 (612-649)||(52801896-52801933)
[»] chr3 (73 HSPs)
chr3 (123-330)||(8340091-8340298)
chr3 (146-334)||(35688275-35688463)
chr3 (148-334)||(19454760-19454947)
chr3 (145-334)||(30248002-30248189)
chr3 (147-334)||(42096690-42096876)
chr3 (123-334)||(48080012-48080221)
chr3 (144-236)||(38694858-38694950)
chr3 (147-334)||(45079153-45079339)
chr3 (148-239)||(19618660-19618751)
chr3 (397-496)||(27346784-27346884)
chr3 (147-239)||(44792684-44792776)
chr3 (148-239)||(41923944-41924035)
chr3 (147-318)||(48583704-48583873)
chr3 (147-236)||(32995208-32995297)
chr3 (147-228)||(35732210-35732291)
chr3 (147-239)||(24987448-24987540)
chr3 (145-334)||(41410205-41410393)
chr3 (144-244)||(49359933-49360033)
chr3 (396-474)||(43657471-43657550)
chr3 (405-470)||(32995457-32995523)
chr3 (395-480)||(48584227-48584313)
chr3 (150-251)||(6408551-6408652)
chr3 (147-244)||(23299557-23299654)
chr3 (155-236)||(49374775-49374856)
chr3 (155-244)||(50508908-50508997)
chr3 (597-709)||(10084846-10084957)
chr3 (150-236)||(10085305-10085391)
chr3 (150-236)||(10192225-10192311)
chr3 (396-469)||(30964374-30964448)
chr3 (396-469)||(30980186-30980260)
chr3 (396-469)||(38694661-38694735)
chr3 (147-236)||(5908205-5908294)
chr3 (147-244)||(19873067-19873164)
chr3 (597-750)||(32995644-32995794)
chr3 (113-237)||(33118631-33118762)
chr3 (155-244)||(39352443-39352532)
chr3 (613-709)||(10191766-10191861)
chr3 (615-698)||(28751789-28751871)
chr3 (396-470)||(49375008-49375083)
chr3 (263-333)||(2150628-2150698)
chr3 (597-751)||(5908642-5908792)
chr3 (396-469)||(10085079-10085153)
chr3 (396-469)||(10191999-10192073)
chr3 (149-219)||(43657244-43657314)
chr3 (263-336)||(14418321-14418394)
chr3 (150-239)||(25467463-25467552)
chr3 (597-750)||(38694389-38694539)
chr3 (147-244)||(50481100-50481197)
chr3 (144-244)||(5041090-5041190)
chr3 (396-467)||(36678928-36679000)
chr3 (155-334)||(22845078-22845254)
chr3 (155-237)||(27064174-27064256)
chr3 (618-716)||(27346992-27347088)
chr3 (612-714)||(35732642-35732742)
chr3 (293-335)||(39144061-39144103)
chr3 (155-244)||(13735663-13735752)
chr3 (396-474)||(5908445-5908525)
chr3 (606-750)||(36678654-36678795)
chr3 (263-334)||(42881427-42881497)
chr3 (267-334)||(54444343-54444410)
chr3 (147-323)||(33099620-33099794)
chr3 (157-239)||(51055443-51055525)
chr3 (155-244)||(12905597-12905686)
chr3 (147-215)||(26795319-26795387)
chr3 (147-219)||(27346555-27346627)
chr3 (155-219)||(33558838-33558902)
chr3 (263-334)||(6083490-6083561)
chr3 (147-194)||(40563913-40563960)
chr3 (190-236)||(30964594-30964640)
chr3 (190-236)||(30980406-30980452)
chr3 (179-236)||(7940337-7940394)
chr3 (261-334)||(27346655-27346727)
chr3 (612-649)||(42096426-42096463)
[»] chr2 (51 HSPs)
chr2 (112-334)||(18974644-18974865)
chr2 (112-335)||(41935466-41935701)
chr2 (155-334)||(29546037-29546217)
chr2 (150-334)||(2656776-2656959)
chr2 (147-239)||(4481031-4481123)
chr2 (147-334)||(4289615-4289801)
chr2 (147-236)||(35048598-35048687)
chr2 (392-489)||(8754085-8754183)
chr2 (147-244)||(23231706-23231803)
chr2 (147-239)||(32422778-32422870)
chr2 (155-336)||(667913-668092)
chr2 (155-228)||(15161970-15162043)
chr2 (158-239)||(38620378-38620459)
chr2 (147-239)||(25424729-25424821)
chr2 (147-239)||(33867583-33867675)
chr2 (618-746)||(42970667-42970792)
chr2 (148-244)||(4592226-4592322)
chr2 (147-251)||(31440661-31440765)
chr2 (606-753)||(11789032-11789176)
chr2 (144-239)||(13142609-13142704)
chr2 (405-474)||(2657021-2657091)
chr2 (581-747)||(2657195-2657357)
chr2 (155-334)||(15234293-15234472)
chr2 (147-244)||(3329166-3329263)
chr2 (155-228)||(8027500-8027573)
chr2 (405-469)||(11788836-11788901)
chr2 (150-230)||(16711389-16711469)
chr2 (123-251)||(30241380-30241508)
chr2 (147-218)||(11788599-11788669)
chr2 (123-190)||(40507693-40507760)
chr2 (597-686)||(35049033-35049121)
chr2 (405-469)||(42969249-42969314)
chr2 (145-244)||(17154179-17154277)
chr2 (396-466)||(35048837-35048908)
chr2 (123-190)||(40475346-40475413)
chr2 (396-469)||(15162169-15162243)
chr2 (143-244)||(29155287-29155388)
chr2 (144-244)||(9205150-9205250)
chr2 (630-714)||(12345130-12345212)
chr2 (618-750)||(15162374-15162503)
chr2 (147-219)||(44070462-44070534)
chr2 (396-469)||(12345359-12345433)
chr2 (147-193)||(42969007-42969053)
chr2 (261-318)||(8753932-8753989)
chr2 (294-335)||(12757886-12757927)
chr2 (612-648)||(4290027-4290063)
chr2 (439-470)||(8027322-8027353)
chr2 (299-334)||(35005407-35005442)
chr2 (597-655)||(8754293-8754351)
chr2 (156-237)||(29221229-29221310)
chr2 (156-237)||(29334528-29334609)
[»] scaffold0160 (1 HSPs)
scaffold0160 (147-334)||(26068-26255)
[»] chr7 (69 HSPs)
chr7 (145-334)||(38469862-38470050)
chr7 (385-497)||(38469703-38469815)
chr7 (147-336)||(48558625-48558813)
chr7 (147-334)||(1875984-1876172)
chr7 (112-327)||(5924017-5924234)
chr7 (84-334)||(30391466-30391719)
chr7 (138-335)||(45112170-45112367)
chr7 (124-334)||(2959897-2960106)
chr7 (155-334)||(40342259-40342437)
chr7 (123-335)||(36072572-36072778)
chr7 (147-251)||(27398565-27398669)
chr7 (147-334)||(40789474-40789660)
chr7 (147-334)||(44300698-44300884)
chr7 (148-334)||(28067214-28067399)
chr7 (144-228)||(34152405-34152489)
chr7 (144-228)||(34174635-34174719)
chr7 (144-251)||(10066284-10066391)
chr7 (147-334)||(17172162-17172348)
chr7 (147-237)||(36074163-36074253)
chr7 (147-239)||(16567552-16567644)
chr7 (147-239)||(16598018-16598110)
chr7 (147-239)||(46181198-46181290)
chr7 (395-496)||(28067058-28067160)
chr7 (147-236)||(26299138-26299227)
chr7 (123-244)||(43702446-43702567)
chr7 (147-251)||(19805023-19805127)
chr7 (144-252)||(43224300-43224408)
chr7 (396-474)||(26299607-26299686)
chr7 (147-236)||(33978810-33978899)
chr7 (155-251)||(31454891-31454987)
chr7 (147-218)||(9355220-9355291)
chr7 (396-470)||(12499420-12499495)
chr7 (620-751)||(48558225-48558352)
chr7 (396-468)||(9223857-9223930)
chr7 (147-219)||(9223627-9223699)
chr7 (160-324)||(11244022-11244186)
chr7 (597-747)||(9224053-9224200)
chr7 (261-335)||(40855956-40856030)
chr7 (597-750)||(33979245-33979395)
chr7 (396-464)||(34152212-34152281)
chr7 (396-464)||(34174843-34174912)
chr7 (396-467)||(9354992-9355064)
chr7 (605-709)||(12499187-12499290)
chr7 (597-709)||(26299803-26299914)
chr7 (618-750)||(28066813-28066942)
chr7 (123-219)||(46783037-46783133)
chr7 (156-251)||(5023217-5023311)
chr7 (597-655)||(16562322-16562380)
chr7 (597-655)||(16603282-16603340)
chr7 (261-334)||(21153297-21153368)
chr7 (147-335)||(25309457-25309642)
chr7 (396-469)||(33979049-33979123)
chr7 (606-750)||(34151937-34152078)
chr7 (606-750)||(34175046-34175187)
chr7 (618-709)||(2960314-2960404)
chr7 (606-709)||(9354763-9354865)
chr7 (144-219)||(9477641-9477716)
chr7 (144-206)||(16560856-16560918)
chr7 (144-206)||(16604744-16604806)
chr7 (612-649)||(17171898-17171935)
chr7 (150-219)||(33067525-33067594)
chr7 (612-649)||(44301111-44301148)
chr7 (147-219)||(39414563-39414635)
chr7 (149-244)||(3362943-3363038)
chr7 (612-655)||(30391982-30392025)
chr7 (263-334)||(42284604-42284675)
chr7 (405-474)||(30391780-30391850)
chr7 (266-335)||(4912652-4912721)
chr7 (612-649)||(40787989-40788026)
[»] chr8 (34 HSPs)
chr8 (147-334)||(221962-222149)
chr8 (147-334)||(691117-691304)
chr8 (147-334)||(735585-735772)
chr8 (147-333)||(38020027-38020213)
chr8 (147-334)||(859481-859667)
chr8 (147-327)||(7580036-7580213)
chr8 (147-239)||(24789491-24789583)
chr8 (147-334)||(20216186-20216372)
chr8 (147-334)||(20235784-20235970)
chr8 (147-251)||(1376164-1376268)
chr8 (147-244)||(19643546-19643643)
chr8 (144-244)||(2620993-2621093)
chr8 (147-251)||(3616890-3616994)
chr8 (155-238)||(1667243-1667326)
chr8 (148-219)||(38551558-38551629)
chr8 (148-244)||(6109602-6109698)
chr8 (396-469)||(38551783-38551857)
chr8 (147-244)||(25419246-25419343)
chr8 (155-244)||(26561260-26561349)
chr8 (597-686)||(38551979-38552067)
chr8 (147-239)||(2472318-2472410)
chr8 (148-244)||(24891450-24891546)
chr8 (155-237)||(25500133-25500215)
chr8 (294-335)||(29528131-29528172)
chr8 (129-237)||(15542096-15542203)
chr8 (144-227)||(30801224-30801307)
chr8 (155-237)||(15961711-15961793)
chr8 (597-655)||(38552200-38552258)
chr8 (155-252)||(7057592-7057689)
chr8 (612-649)||(20216599-20216636)
chr8 (612-649)||(20236197-20236234)
chr8 (290-335)||(43239302-43239347)
chr8 (157-231)||(28970823-28970897)
chr8 (294-335)||(43511316-43511357)
[»] chr5 (53 HSPs)
chr5 (144-327)||(4901892-4902072)
chr5 (147-335)||(15673920-15674107)
chr5 (147-335)||(33347016-33347204)
chr5 (113-335)||(35935245-35935473)
chr5 (123-236)||(32302346-32302457)
chr5 (123-236)||(35853479-35853590)
chr5 (147-334)||(19254430-19254616)
chr5 (148-334)||(639304-639489)
chr5 (149-335)||(16186749-16186934)
chr5 (144-252)||(7978007-7978115)
chr5 (147-239)||(14645294-14645386)
chr5 (395-496)||(639149-639251)
chr5 (147-334)||(41692410-41692596)
chr5 (147-244)||(41616563-41616660)
chr5 (144-236)||(30774783-30774875)
chr5 (147-334)||(34718726-34718912)
chr5 (144-244)||(29455767-29455867)
chr5 (395-496)||(16186987-16187089)
chr5 (597-750)||(30775221-30775371)
chr5 (147-236)||(36470490-36470579)
chr5 (147-251)||(1060927-1061031)
chr5 (147-251)||(14088248-14088351)
chr5 (147-219)||(15719238-15719310)
chr5 (157-334)||(6277755-6277933)
chr5 (396-469)||(30775025-30775099)
chr5 (396-469)||(32302608-32302682)
chr5 (396-469)||(35853741-35853815)
chr5 (147-334)||(38309755-38309941)
chr5 (147-252)||(14087643-14087747)
chr5 (405-469)||(14645878-14645943)
chr5 (150-224)||(10937403-10937477)
chr5 (169-323)||(24489027-24489179)
chr5 (597-652)||(3049392-3049447)
chr5 (618-709)||(16187201-16187291)
chr5 (263-334)||(16620256-16620327)
chr5 (124-187)||(42030825-42030888)
chr5 (156-334)||(19549338-19549516)
chr5 (294-334)||(30900-30940)
chr5 (612-750)||(19254029-19254163)
chr5 (147-244)||(22632276-22632373)
chr5 (290-335)||(25828361-25828406)
chr5 (612-649)||(34718462-34718499)
chr5 (612-649)||(41692146-41692183)
chr5 (618-714)||(638944-639038)
chr5 (147-195)||(6224913-6224961)
chr5 (298-334)||(6311111-6311147)
chr5 (298-334)||(25694618-25694654)
chr5 (123-195)||(25828459-25828531)
chr5 (630-686)||(32302824-32302879)
chr5 (597-709)||(35853932-35854043)
chr5 (396-470)||(3049586-3049661)
chr5 (157-244)||(23141655-23141742)
chr5 (162-244)||(6310974-6311056)
[»] scaffold0249 (2 HSPs)
scaffold0249 (146-335)||(20011-20199)
scaffold0249 (393-495)||(20250-20353)
[»] chr6 (23 HSPs)
chr6 (150-335)||(6337872-6338057)
chr6 (144-236)||(9062181-9062273)
chr6 (144-251)||(20691609-20691716)
chr6 (123-334)||(6938006-6938212)
chr6 (147-334)||(24447063-24447249)
chr6 (150-251)||(1329582-1329683)
chr6 (147-334)||(1221652-1221838)
chr6 (606-753)||(9061689-9061833)
chr6 (144-239)||(13534224-13534319)
chr6 (147-239)||(33328574-33328666)
chr6 (396-469)||(6799249-6799323)
chr6 (396-469)||(9061956-9062030)
chr6 (148-228)||(6337220-6337300)
chr6 (147-219)||(6799478-6799550)
chr6 (140-236)||(28769857-28769953)
chr6 (147-251)||(31070782-31070886)
chr6 (147-239)||(33331586-33331678)
chr6 (113-220)||(33960189-33960295)
chr6 (143-244)||(12429405-12429506)
chr6 (123-316)||(10499127-10499322)
chr6 (263-334)||(33960092-33960163)
chr6 (612-649)||(1221392-1221429)
chr6 (612-649)||(24446799-24446836)
[»] scaffold0242 (8 HSPs)
scaffold0242 (395-496)||(12873-12975)
scaffold0242 (395-496)||(21708-21810)
scaffold0242 (147-219)||(13129-13201)
scaffold0242 (147-219)||(21964-22036)
scaffold0242 (618-709)||(12671-12761)
scaffold0242 (618-709)||(21506-21596)
scaffold0242 (264-334)||(13028-13098)
scaffold0242 (264-334)||(21863-21933)
[»] scaffold0230 (2 HSPs)
scaffold0230 (147-334)||(26614-26800)
scaffold0230 (612-649)||(27027-27064)
[»] scaffold0024 (3 HSPs)
scaffold0024 (618-756)||(109553-109688)
scaffold0024 (147-236)||(110045-110134)
scaffold0024 (396-469)||(109819-109893)
[»] scaffold0005 (2 HSPs)
scaffold0005 (147-244)||(240498-240595)
scaffold0005 (155-237)||(222000-222082)
[»] scaffold0938 (4 HSPs)
scaffold0938 (264-334)||(561-631)
scaffold0938 (395-496)||(684-786)
scaffold0938 (157-238)||(450-531)
scaffold0938 (612-734)||(908-1027)
[»] scaffold0062 (8 HSPs)
scaffold0062 (395-496)||(23666-23768)
scaffold0062 (264-334)||(23821-23891)
scaffold0062 (395-496)||(33834-33936)
scaffold0062 (264-334)||(33989-34059)
scaffold0062 (157-238)||(23921-24002)
scaffold0062 (157-238)||(34089-34170)
scaffold0062 (612-734)||(23425-23544)
scaffold0062 (612-734)||(33593-33712)
[»] scaffold0602 (1 HSPs)
scaffold0602 (294-332)||(5132-5170)
[»] scaffold0164 (2 HSPs)
scaffold0164 (147-214)||(7158-7225)
scaffold0164 (147-214)||(15039-15106)
[»] scaffold0312 (1 HSPs)
scaffold0312 (147-244)||(5903-6000)


Alignment Details
Target: chr1 (Bit Score: 212; Significance: 1e-116; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 8 - 341
Target Start/End: Original strand, 48984961 - 48985302
Alignment:
Q  8 cttaactcgtgataacttctctaactactccttttaattcgtgataacttcgtggtgtatttgttcgttaatattaggatggcaatgtgtatccaatggg 107  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||    
T  48984961 cttaattcgtgataacttctctaactactccttttaattcgtgataacttcgtggtgtatttgttcgttaatattaggatggtaatgggtacccaatggg 48985060  T
Q  108 cagggta--------cccatcttcatacccgcgtttgtaaaaaatgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacac 199  Q
    |||||||        ||||||| |||||||||||| ||||||||| ||||||||  ||||||||| |||||| ||| ||||||||||||||||||| |||    
T  48985061 cagggtactatggtacccatctccatacccgcgttcgtaaaaaatatccgtacccacgtgggcaataatttttgtgtccttcctcataccctatgggcac 48985160  T
Q  200 ttaagtgtccatacccgcacccattacccgcattttaactgtgaacaaacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaa 299  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| | |||||       || |||||||||||||||||||||| ||||||||||||||    
T  48985161 ttaagtgtccatacctgcacccattacccgcattttaactgtgaaaagacaataaaaaaatatcacaattgaaataaaactataatccataaaatttcaa 48985260  T
Q  300 atcaactcataaaatagtacgaatcgtagtatttaattagcc 341  Q
    |||||||||||||||||| ||||| |||||||||||||||||    
T  48985261 atcaactcataaaatagtccgaatggtagtatttaattagcc 48985302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 578 - 795
Target Start/End: Original strand, 48985539 - 48985750
Alignment:
Q  578 ggattgcgggactgaataggtacagtatccatagccgtgtccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagca 677  Q
    |||||||||||||| |||| ||||||  |||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||  | |||||||||| |     
T  48985539 ggattgcgggactggatag-tacagtgcccatagccgtgtccatacacattcaaatatgcgggtaattacccataccc-aagc-cgaacccatgaaaacg 48985635  T
Q  678 gtgttttacactatccatagcggatacttttttgcggatccccattggggtctgggtacaattgtcatccctattcgttatgtagcatttgctataacaa 777  Q
    | |||||||| ||||||||||||||||||||| |  | |||||| |  ||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  48985636 gggttttacattatccatagcggatactttttggaag-tcccca-taaggtctgggtacaattgttatccctattcgttatgtagca-ttgctataacaa 48985732  T
Q  778 aaattagctagtgtctac 795  Q
    ||||||||||||||||||    
T  48985733 aaattagctagtgtctac 48985750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 124 - 335
Target Start/End: Complemental strand, 35949753 - 35949542
Alignment:
Q  124 atacccgcgtttgtaaaaaatgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccat 223  Q
    ||||| ||||||||||||||| | |||||| |||||| |||||| ||||||| | |||| |||||||| ||| ||| |||||| ||||||||||||||||    
T  35949753 atacctgcgtttgtaaaaaatattcgtaccctcgtggacaacaactttagtgtcattccccataccctgtgggcacctaagtgcccatacccgcacccat 35949654  T
Q  224 tacccgcattttaactgtgaacaaacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaat 323  Q
    |||||||| ||||||| |||| | |||||        ||||||| ||||||| |||||| | ||| ||||||||||||||||||||||||||||| ||||    
T  35949653 tacccgcagtttaactctgaaaagacaataaaaaagcaccacaactgaaatacaactatgatccagaaaatttcaaatcaactcataaaatagtatgaat 35949554  T
Q  324 cgtagtatttaa 335  Q
     |||||||||||    
T  35949553 ggtagtatttaa 35949542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 147 - 335
Target Start/End: Complemental strand, 31646428 - 31646242
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| |||||||||||||| |||||||||||| ||| |||||| |||||||||||||| ||||||||||||||||| |||| |    
T  31646428 ccgtaccctcgtgggcaacaactttagtgcccttccccataccctatgggcacctaagtgcccatacccgcacccgttacccgcattttaactatgaaaa 31646329  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtatttaa 335  Q
     ||||          ||||||||||||||||||||| | ||| |||||||||||||||||||||||||| || ||||| ||||||||||    
T  31646328 gacaacaaaaaac--ccacaattgaaataaaactatgatccaaaaaatttcaaatcaactcataaaataatatgaatcatagtatttaa 31646242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 148 - 334
Target Start/End: Original strand, 48662636 - 48662822
Alignment:
Q  148 cgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaacaa 247  Q
    |||||| ||||||||||||| ||||||||| |||  ||||| |||||| ||| ||||||| ||||||||||||||||||||||||||||| | |||| |     
T  48662636 cgtaccctcgtgggcaacaactttagtgcctttctccatactctatgggcacctaagtgttcatacccgcacccattacccgcattttaattatgaaaag 48662735  T
Q  248 acaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
    |||||         ||||||||||||||||| ||| | ||| |||||||||||||||||||||||||| || |||||||||||||||    
T  48662736 acaataataaaaacccacaattgaaataaaattattatccaaaaaatttcaaatcaactcataaaataatatgaatcgtagtattta 48662822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 123 - 335
Target Start/End: Complemental strand, 29426467 - 29426254
Alignment:
Q  123 catacccgcgtttgtaaaaaatgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcaccca 222  Q
    |||| |||||||||||||||||  ||||||| ||||||||||||| |||||||||||||| |||||| ||||| ||| |||||| |||||||||||||||    
T  29426467 catatccgcgtttgtaaaaaatacccgtaccctcgtgggcaacaactttagtgcccttccccataccatatgggcacctaagtgcccatacccgcaccca 29426368  T
Q  223 ttacccgcattttaactgtgaacaaacaat-nnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacga 321  Q
    |||||| || ||||||| |||| | | |||         |||||| |||||||| |||||| | ||| |||||||||||||||||||||||||| || ||    
T  29426367 ttacccacagtttaactctgaaaagataataaaaaaagcaccacagttgaaatacaactatgatccagaaaatttcaaatcaactcataaaataatatga 29426268  T
Q  322 atcgtagtatttaa 335  Q
    || |||||| ||||    
T  29426267 atggtagtacttaa 29426254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 150 - 335
Target Start/End: Original strand, 48796518 - 48796703
Alignment:
Q  150 taccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaacaaac 249  Q
    |||| |||||||||| || ||||||||||||||  ||||||| ||| ||| |||||| |||||||||||||||||||||||| ||||||| |||| | ||    
T  48796518 taccctcgtgggcaataactttagtgcccttccctataccctttgggcacctaagtgcccatacccgcacccattacccgcagtttaactctgaaaagac 48796617  T
Q  250 aatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtatttaa 335  Q
    |||        ||||||| ||||||| |||||| | ||| ||||||||||||||||||||||||||||| |||| |||||||||||    
T  48796618 aataaaaaagcaccacaactgaaatacaactatgatccagaaaatttcaaatcaactcataaaatagtatgaatggtagtatttaa 48796703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 385 - 497
Target Start/End: Original strand, 48985347 - 48985459
Alignment:
Q  385 tagacagtactttacataaattatacgtcaaaaagttgtagttgtatgttaaatcataataaattattactaaagtttttattaagttgtattaagatgt 484  Q
    |||| ||||||||||| || |||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  48985347 tagatagtactttacacaagttatacgttaaaaagttgcagttgcatgttaaatcataataaattattactaaagtttttattaagttgtattaaaatgt 48985446  T
Q  485 tttagcgttaggt 497  Q
    |||||||| ||||    
T  48985447 tttagcgtgaggt 48985459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 147 - 334
Target Start/End: Original strand, 20414946 - 20415132
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| |||| ||||||||| | |||||||||| |||||||||| |||||||||||||||||||||||| |||  || |||| |    
T  20414946 ccgtaccctcgtgggcaacaactttactgcccttccccgtaccctatgggcacttaagtggccatacccgcacccattacccgcactttctctatgaaaa 20415045  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
     |||||        | |||||||||||||||||||| | ||| ||   || ||||||||| |||||||||||||||||||||||||||    
T  20415046 gacaataaaaaac-atcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaatagtacgaatcgtagtattta 20415132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 47662253 - 47662342
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcatttta 236  Q
    ||||||| ||||||||||||| |||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||| ||||    
T  47662253 ccgtaccctcgtgggcaacaactttagtgcccttccccataccctatgggcacttaagtgcccatacccgcacccattacccgcacttta 47662342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 145 - 334
Target Start/End: Original strand, 50099789 - 50099976
Alignment:
Q  145 gtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    ||||||||| || |||| |||||||||||||| ||||| || ||| ||||| |||||||||| |||||||||||||||||||| ||| |||||| |||||    
T  50099789 gtccgtaccctcatgggtaacaattttagtgctcttccccacaccttatgggcacttaagtgcccatacccgcacccattacctgcactttaaccgtgaa 50099888  T
Q  245 caaacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
     | | |||        |||||||||||||||||||||| |  || |||| |||||||||| ||||||||||| | |||||||||||||||    
T  50099889 aagataataaaaaac-accacaattgaaataaaactatga-tcaaaaaaattcaaatcaattcataaaatagcatgaatcgtagtattta 50099976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 145 - 236
Target Start/End: Original strand, 39026717 - 39026808
Alignment:
Q  145 gtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcatttta 236  Q
    ||||||||  ||||||||||||| |||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||| ||||    
T  39026717 gtccgtactctcgtgggcaacaactttagtgcccttccccataccctatgggcacttaagtgcccatacccgcacccattacccgcacttta 39026808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 147 - 251
Target Start/End: Complemental strand, 44328059 - 44327955
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||| ||||||| |||||| ||||||| ||||||||||||  || ||||||||||||||||||||||||||||||| ||||||| |||| |    
T  44328059 ccgtaccctcgtgagcaacaactttagtccccttccccataccctatgggtacctaagtgtccatacccgcacccattacccgcactttaactatgaaaa 44327960  T
Q  247 aacaa 251  Q
    |||||    
T  44327959 aacaa 44327955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 147 - 334
Target Start/End: Complemental strand, 19996805 - 19996620
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| |||||||||||||| ||||||||||||  |  ||||||| ||||||||||||||||||||||| ||| ||| |||| |    
T  19996805 ccgtaccctcgtgggcaacaactttagtgcccttccccataccctatgggtatctaagtgttcatacccgcacccattacccgcactttgactatgaaaa 19996706  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
     |||||       |  |||||||||||||||||||| | | | |   ||| |||| ||||||||||||| ||| ||||||||||||||    
T  19996705 gacaataaaaacat--cacaattgaaataaaactatgatctaaatcttttaaaattaactcataaaataatacaaatcgtagtattta 19996620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 147 - 334
Target Start/End: Complemental strand, 4893422 - 4893236
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| |||| ||||||||| |||||||||||| ||||||||||  ||||||| ||||||||||||||| |||  || |||| |    
T  4893422 ccgtaccctcgtgggcaacaactttaatgcccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcactttctctatgaaaa 4893323  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
     |||||        | |||||||||||||||||||| | ||| ||   || ||||||||| |||||||| ||||||| ||||||||||    
T  4893322 gacaataaaaaac-atcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaataatacgaattgtagtattta 4893236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 144 - 334
Target Start/End: Original strand, 25059076 - 25059264
Alignment:
Q  144 tgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtga 243  Q
    |||||||| | ||||||||||||| |||||||||||||| ||||||||||||  |  |||||| |||||||||||||||||||||||| ||||||| |||    
T  25059076 tgtccgtatcctcgtgggcaacaactttagtgcccttccccataccctatgggtatctaagtgcccatacccgcacccattacccgcactttaactatga 25059175  T
Q  244 acaaacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
    | | ||| |       |   |||||||||||||||||||   | | | | ||| |||| ||||||||||||| ||||||||||||||||||    
T  25059176 aaagacattaaaaacat--tacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatacgaatcgtagtattta 25059264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 147 - 334
Target Start/End: Original strand, 29185065 - 29185251
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| |||| ||||||||| |||||||||||| ||||||||||  ||||||| ||||||||||||||| |||  || |||| |    
T  29185065 ccgtaccctcgtgggcaacaactttaatgcccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcactttctctatgaaaa 29185164  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
     |||||        | |||||||||||||||||||| | ||| ||   || ||||||||| |||||||| ||||||| ||||||||||    
T  29185165 gacaataaaaaac-atcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaataatacgaattgtagtattta 29185251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 147 - 252
Target Start/End: Original strand, 28220946 - 28221051
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| |||||||||||| | ||||||||||||  |  |||||| |||||||||||||||||||||||| ||||||| |||| |    
T  28220946 ccgtaccctcgtgggcaacaactttagtgccctttcccataccctatgggtatctaagtgcccatacccgcacccattacccgcactttaactatgaaaa 28221045  T
Q  247 aacaat 252  Q
    ||||||    
T  28221046 aacaat 28221051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 144 - 244
Target Start/End: Original strand, 19506358 - 19506458
Alignment:
Q  144 tgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtga 243  Q
    |||||||||| ||||||||||||| |||||||||||||| ||||||||||||  |  |||||| ||||||||||||||||||||| || ||||||| |||    
T  19506358 tgtccgtaccctcgtgggcaacaactttagtgcccttccccataccctatgggtatctaagtgcccatacccgcacccattacccacactttaactatga 19506457  T
Q  244 a 244  Q
    |    
T  19506458 a 19506458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 395 - 494
Target Start/End: Original strand, 50100026 - 50100126
Alignment:
Q  395 tttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaagttgtattaagatgttttagcgtt 493  Q
    ||||||||| |||||||| |||||| |||||||| |||||||| |||||||||||| ||||||||| |||| ||||||||||||||| |||||||| |||    
T  50100026 tttacataagttatacgttaaaaagatgtagttgcatgttaaagtcataataaattgttactaaagattttgttaagttgtattaagttgttttagggtt 50100125  T
Q  494 a 494  Q
    |    
T  50100126 a 50100126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 147 - 334
Target Start/End: Original strand, 610688 - 610873
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| |||||| | ||||| ||||||||||||  |||||||||  ||||||||||||||||||||||| ||||||| |||| |    
T  610688 ccgtaccctcgtgggcaacaactttagttctcttccccataccctatgggtacttaagtgcacatacccgcacccattacccgcactttaactatgaaaa 610787  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
     |||||       |  |||||||||||||||| |||   ||| |   ||| |||| ||||||||||| ||||| ||||||||||||||    
T  610788 gacaataaaaacat--cacaattgaaataaaattatggtccaaattttttaaaattaactcataaaagagtacaaatcgtagtattta 610873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 155 - 244
Target Start/End: Complemental strand, 29054727 - 29054638
Alignment:
Q  155 tcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    ||||||||||||| ||| || ||||||| ||||||||||||  || ||||||||||||||||||||||||||||||| ||||||| ||||    
T  29054727 tcgtgggcaacaactttggtccccttccccataccctatgggtacctaagtgtccatacccgcacccattacccgcactttaactatgaa 29054638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 597 - 750
Target Start/End: Original strand, 32133882 - 32134032
Alignment:
Q  597 gtacagtatccatagccgtgtccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccata 696  Q
    |||||||  ||||| ||||| |||||||||   |||||||||||||||||||||||||| |||   |||||||||||||| | ||||||| ||| ||||     
T  32133882 gtacagtgcccatacccgtgcccatacccaaataaatttgcgggtaattacccataccc-aagtccggacccatgaaagcggggttttaccctacccatt 32133980  T
Q  697 gcggatacttttttgcggatccccattggggtctgggtacaattgtcatcccta 750  Q
    ||||||| |||||||||| | |||| | |||||||||| |||||||||||||||    
T  32133981 gcggata-ttttttgcgggtgccca-tagggtctgggtccaattgtcatcccta 32134032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 147 - 334
Target Start/End: Complemental strand, 33363025 - 33362839
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| |||| ||||||||| |||||||||||| ||||||||||  ||||||| ||||||||||||||| |||  || |||| |    
T  33363025 ccgtaccctcgtgggcaacaactttaatgcccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcactttctctatgaaaa 33362926  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
     |||||       || ||||||  |||||||||||| | ||| ||   || ||||||||| |||||||| ||||||| ||||||||||    
T  33362925 gacaat-aaaaaatatcacaatataaataaaactatgatccaaaattatttaaatcaactaataaaataatacgaattgtagtattta 33362839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 35739141 - 35739052
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcatttta 236  Q
    ||||||| | |||||||||||||||||||||||||| || ||||||||| |||||||||| ||||| |||||||||| ||||||| ||||    
T  35739141 ccgtacccttgtgggcaacaattttagtgcccttccccagaccctatgggcacttaagtgcccatatccgcacccatcacccgcacttta 35739052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 147 - 244
Target Start/End: Complemental strand, 42069247 - 42069150
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    ||||||| ||||||||||||| |||||| ||||||| ||||||||||||  |  |||||| |||||||||||||||||||||||| ||||||| ||||    
T  42069247 ccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtatctaagtgcccatacccgcacccattacccgcactttaactatgaa 42069150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 147 - 239
Target Start/End: Original strand, 13312711 - 13312803
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaact 239  Q
    ||||||| ||||| ||||||| |||||| ||||||| ||||||||||||  ||||||||  |||||||||||||||||||||||| |||||||    
T  13312711 ccgtaccctcgtgagcaacaactttagtccccttccccataccctatgggtacttaagtacccatacccgcacccattacccgcactttaact 13312803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 123 - 211
Target Start/End: Complemental strand, 28192635 - 28192547
Alignment:
Q  123 catacccgcgtttgtaaaaaatgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccat 211  Q
    |||| |||| |||| |||||||| |||||||||| |||||||||| |||||||||||||| |||||||||||| |||||||||| ||||    
T  28192635 catatccgcctttgcaaaaaatgcccgtaccttcatgggcaacaactttagtgcccttccccataccctatgggcacttaagtgcccat 28192547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 48514407 - 48514499
Alignment:
Q  144 tgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcatttta 236  Q
    |||||||||| |||||| |||||| |||||||| ||| | |||||||||||| |||||||||| ||||| ||| |||||||||||||||||||    
T  48514407 tgtccgtaccctcgtggacaacaactttagtgctctttcccataccctatgggcacttaagtgcccataaccgtacccattacccgcatttta 48514499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 9222222 - 9222313
Alignment:
Q  148 cgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaact 239  Q
    |||||| ||||||||||||| |||||| ||||||| ||||||||||||  ||||||||  |||||||| ||||||||||||||| |||||||    
T  9222222 cgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacttaagtacccatacccacacccattacccgcactttaact 9222313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 156 - 335
Target Start/End: Complemental strand, 22580187 - 22580016
Alignment:
Q  156 cgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaacaaacaatnnn 255  Q
    ||||| ||| |||||||||||| || | |||| |||||||  || | |||| ||||||||||||| |||| ||||| ||||||| |||| | | |||       
T  22580187 cgtggacaataattttagtgccttttcccatatcctatgggtaccttagtgcccatacccgcaccaattatccgcaatttaactatgaaaatataat--- 22580091  T
Q  256 nnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtatttaa 335  Q
         | ||||||||||||||||||||    || |||||||||||||||||||||| |||||||||||||||||||||||    
T  22580090 -----atcacaattgaaataaaactatggttcaaaaaatttcaaatcaactcataatatagtacgaatcgtagtatttaa 22580016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 150 - 239
Target Start/End: Complemental strand, 25815453 - 25815364
Alignment:
Q  150 taccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaact 239  Q
    |||| ||||||||||||| ||| || ||||||| ||||||||||||  ||||||||  |||||||||||||||||||||||| |||||||    
T  25815453 taccctcgtgggcaacaactttggtccccttccccataccctatgggtacttaagtacccatacccgcacccattacccgcactttaact 25815364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 606 - 750
Target Start/End: Complemental strand, 35738693 - 35738552
Alignment:
Q  606 ccatagccgtgtccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccatagcggatact 705  Q
    ||||| ||||| ||||||||||  |||||||||||||||||||||||||| ||||  || ||||||||||| | ||||||| ||| ||||||||| || |    
T  35738693 ccatacccgtgcccatacccatataaatttgcgggtaattacccataccc-aagcccggccccatgaaagcggggttttaccctacccatagcgggta-t 35738596  T
Q  706 tttttgcggatccccattggggtctgggtacaattgtcatcccta 750  Q
    ||||||| | | |||| | |||||||||| |||||| ||||||||    
T  35738595 tttttgcaggtgccca-tagggtctgggtccaattgccatcccta 35738552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 945466 - 945548
Alignment:
Q  155 tcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaa 237  Q
    ||||||||||||| |||||||||||||| |||| |||||||  |  |||||| |||||||||||||||||||||||| |||||    
T  945466 tcgtgggcaacaactttagtgcccttccccatatcctatgggtatctaagtgcccatacccgcacccattacccgcactttaa 945548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 159 - 335
Target Start/End: Original strand, 2501563 - 2501737
Alignment:
Q  159 gggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaacaaacaatnnnnnn 258  Q
    ||||||||| ||||||| |||||| ||| || ||||| ||| | || | ||||||||||||||||||||| || || |||| |||| || ||||          
T  2501563 gggcaacaactttagtgtccttccccatcccttatgggcaccttagcgcccatacccgcacccattacccacacttgaactctgaaaaatcaataaaaa- 2501661  T
Q  259 ntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtatttaa 335  Q
     || || | || ||||||||||||    || |||||||||||||||||||||||| |||||||||||||||||||||    
T  2501662 -tatcatagttaaaataaaactatggttcaaaaaatttcaaatcaactcataaaagagtacgaatcgtagtatttaa 2501737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 147 - 237
Target Start/End: Original strand, 30489644 - 30489734
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaa 237  Q
    ||||||| ||||||  ||||| |||||||||||||| |||| ||||||||||| |||||| | ||||||| |||||||||||||| |||||    
T  30489644 ccgtaccctcgtggataacaactttagtgcccttccccatatcctatggacacctaagtgcctatacccgtacccattacccgcactttaa 30489734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 155 - 319
Target Start/End: Complemental strand, 30623120 - 30622959
Alignment:
Q  155 tcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaacaaacaatnn 254  Q
    ||||||||||||| |||||| ||||||| |||||||||||   |  |||||||||||||||||||||||||||   | ||||||| |||| |||||||      
T  30623120 tcgtgggcaacaactttagttcccttccccataccctatgagtagctaagtgtccatacccgcacccattacctatactttaactatgaa-aaacaat-- 30623024  T
Q  255 nnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtac 319  Q
         || ||| ||||||||||| ||||   ||| ||| ||||||||||||||||||||||||||    
T  30623023 aaaaatatcacgattgaaataaatctatggtccaaaaattttcaaatcaactcataaaatagtac 30622959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 32133686 - 32133760
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaa 469  Q
    |||||| | |||||||| ||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||    
T  32133686 ttacatcagttatacgttaaaaagttgtagttgcatgttaaaatcataataaattgttactaaagtttttattaa 32133760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 123 - 237
Target Start/End: Complemental strand, 33794555 - 33794441
Alignment:
Q  123 catacccgcgtttgtaaaaaatgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcaccca 222  Q
    |||| |||| ||| ||||||||  |||||||||||| |||||||| |||||| ||||||| ||||||||||||  || ||||||  |||| |||||||||    
T  33794555 catatccgcatttataaaaaatacccgtaccttcgtaggcaacaactttagtccccttccccataccctatgggtacctaagtgctcatatccgcaccca 33794456  T
Q  223 ttacccgcattttaa 237  Q
    |||| |||| |||||    
T  33794455 ttactcgcactttaa 33794441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 35738898 - 35738824
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaa 469  Q
    |||||| | |||||||| ||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||    
T  35738898 ttacatcagttatacgttaaaaagttgtagttgcatgttaaaatcataataaattgttactaaagtttttattaa 35738824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 159 - 237
Target Start/End: Complemental strand, 35978627 - 35978549
Alignment:
Q  159 gggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaa 237  Q
    ||||||||| |||||| ||||||| ||||||||||||  || |||||| |||||||||||||||||||||||| |||||    
T  35978627 gggcaacaactttagtccccttccccataccctatgggtacctaagtgcccatacccgcacccattacccgcactttaa 35978549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 39026959 - 39027033
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaa 469  Q
    |||||| | |||||||| ||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||    
T  39026959 ttacatcagttatacgttaaaaagttgtagttgcatgttaaaatcataataaattgttactaaagtttttattaa 39027033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 155 - 244
Target Start/End: Complemental strand, 48964495 - 48964406
Alignment:
Q  155 tcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    ||||||||||||| |||||| ||||||| ||||| ||||||  || | |||| |||||||||||||||||||||||| ||||||| ||||    
T  48964495 tcgtgggcaacaactttagtccccttccccatactctatgggtacctcagtgcccatacccgcacccattacccgcactttaactatgaa 48964406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 144 - 244
Target Start/End: Original strand, 2978394 - 2978494
Alignment:
Q  144 tgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtga 243  Q
    |||| ||||| | ||||||||||| |||||||||||||| ||||||||||||  |  |||||| |||||||||||| |||||||| || ||||||| |||    
T  2978394 tgtctgtacccttgtgggcaacaactttagtgcccttccccataccctatgggtatctaagtgcccatacccgcacacattacccccactttaactatga 2978493  T
Q  244 a 244  Q
    |    
T  2978494 a 2978494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 263 - 335
Target Start/End: Complemental strand, 8981580 - 8981508
Alignment:
Q  263 cacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtatttaa 335  Q
    ||||||||||||||||| || | | |  ||||||||||||||||||||||||||||||||| |||||||||||    
T  8981580 cacaattgaaataaaacaatgatcaaagaaatttcaaatcaactcataaaatagtacgaatagtagtatttaa 8981508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 606 - 750
Target Start/End: Original strand, 39027144 - 39027285
Alignment:
Q  606 ccatagccgtgtccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccatagcggatact 705  Q
    ||||| ||||| ||||||||||  ||||||||| |||||||||||||||| |||   |||||||||||||| | ||||||| ||| ||||||||| || |    
T  39027144 ccatacccgtgcccatacccatataaatttgcgagtaattacccataccc-aagtccggacccatgaaagcggggttttaccctacccatagcgggta-t 39027241  T
Q  706 tttttgcggatccccattggggtctgggtacaattgtcatcccta 750  Q
    ||||||||| | |||| | | |||||||| |||||| ||||||||    
T  39027242 tttttgcgggtgccca-tagagtctgggtccaattgccatcccta 39027285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 263 - 334
Target Start/End: Complemental strand, 3821290 - 3821219
Alignment:
Q  263 cacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
    |||||||||||||||||||| | ||| ||||||||| |||||| |||| ||| |||||||||||||||||||    
T  3821290 cacaattgaaataaaactatgatccaaaaaatttcagatcaacacatacaattgtacgaatcgtagtattta 3821219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 218
Target Start/End: Complemental strand, 40094631 - 40094568
Alignment:
Q  155 tcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgca 218  Q
    ||||||||||||| |||||||||||||| |||||||||||| ||| |||||| |||||||||||    
T  40094631 tcgtgggcaacaactttagtgcccttccccataccctatgggcacctaagtgcccatacccgca 40094568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 158 - 244
Target Start/End: Complemental strand, 32835629 - 32835543
Alignment:
Q  158 tgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    ||||||| |||||||||||||||||||||||  |||||  || ||||||  ||||||||||| ||||||||||| ||||||| ||||    
T  32835629 tgggcaataattttagtgcccttcctcatactttatgggtacctaagtgctcatacccgcactcattacccgcactttaactatgaa 32835543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 612 - 714
Target Start/End: Original strand, 48514861 - 48514961
Alignment:
Q  612 ccgtgtccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccatagcggatacttttttg 711  Q
    ||||||| |||| ||| ||||||||||||||||||| |||| || ||||  ||| |||||||||| | ||||||| |||||||||||||||| |||||||    
T  48514861 ccgtgtctatactcatacaaatttgcgggtaattactcatatcc-aagctcggatccatgaaagcggggttttaccctatccatagcggata-ttttttg 48514958  T
Q  712 cgg 714  Q
    |||    
T  48514959 cgg 48514961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 228
Target Start/End: Original strand, 2433240 - 2433321
Alignment:
Q  148 cgtaccttcgtgggcaacaattttagtgcccttcctcata-ccctatggacacttaagtgtccatacccgcacccattaccc 228  Q
    |||||||||||||||||||| ||||||| |||||| |||| ||||||||  || |||||| |||||||| ||||||||||||    
T  2433240 cgtaccttcgtgggcaacaactttagtgtccttccccatacccctatgggtacctaagtgcccataccctcacccattaccc 2433321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 405 - 469
Target Start/End: Original strand, 7121227 - 7121292
Alignment:
Q  405 ttatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaa 469  Q
    |||||| | ||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||    
T  7121227 ttatactttaaaaagttgtagttgcatgttaaaatcataataaattgttactaaagtttttattaa 7121292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 262 - 327
Target Start/End: Complemental strand, 40094536 - 40094471
Alignment:
Q  262 ccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgta 327  Q
    ||||||||||||||||||||| | ||| ||||||||||||||||| |||||||| || ||||||||    
T  40094536 ccacaattgaaataaaactatgatccaaaaaatttcaaatcaacttataaaataatatgaatcgta 40094471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 144 - 244
Target Start/End: Complemental strand, 2975377 - 2975277
Alignment:
Q  144 tgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtga 243  Q
    |||| ||||| ||||||||||||| |||||||||||||  ||||||||||||  |  |||||  |||||||||||| |||||||| || ||||||| |||    
T  2975377 tgtctgtaccctcgtgggcaacaactttagtgcccttcgccataccctatgggtatctaagtacccatacccgcacacattacccccactttaactatga 2975278  T
Q  244 a 244  Q
    |    
T  2975277 a 2975277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 14106306 - 14106384
Alignment:
Q  155 tcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcatttta 236  Q
    ||||||||||||| |||||| |||||||||||||||   || ||| |||||| ||||||||||||||||| |||||| ||||    
T  14106306 tcgtgggcaacaactttagtacccttcctcataccc---gggcacctaagtgcccatacccgcacccattccccgcacttta 14106384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 43634766 - 43634672
Alignment:
Q  149 gtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    ||||| ||||||||||||| |||||| ||||||| ||||||||||||  || |||||||||||| |||||| ||| ||||||| ||| ||| ||||    
T  43634766 gtaccctcgtgggcaacaactttagtccccttcc-cataccctatgggtacctaagtgtccatatccgcactcatcacccgcacttttactatgaa 43634672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 618 - 709
Target Start/End: Original strand, 47665778 - 47665868
Alignment:
Q  618 ccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccatagcggatacttttt 709  Q
    ||||||||||  || ||||||||||||||||||||||| ||||  |||||||||||||| || |||||| ||| ||||||||| || |||||    
T  47665778 ccatacccatataattttgcgggtaattacccataccc-aagcccggacccatgaaagcggtattttaccctacccatagcgggtatttttt 47665868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 405 - 469
Target Start/End: Original strand, 48514660 - 48514725
Alignment:
Q  405 ttatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaa 469  Q
    ||||| || |||||||| |||||| |||||||| |||||||||||| |||||||||||||||||||    
T  48514660 ttataagttaaaaagttatagttggatgttaaaatcataataaattgttactaaagtttttattaa 48514725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 150 - 237
Target Start/End: Complemental strand, 14589943 - 14589856
Alignment:
Q  150 taccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaa 237  Q
    |||| |||||||||||||||||| | ||| ||| ||| |||||||||||  ||| ||||| ||| ||| ||||||||||||| |||||    
T  14589943 taccctcgtgggcaacaattttactacccgtccccatgccctatggacatctaaatgtccgtactcgcgcccattacccgcactttaa 14589856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 28192382 - 28192308
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaa 469  Q
    |||||| | ||||||||  ||||||||| |||| |||||||| ||||||||||||||||| ||| ||||||||||    
T  28192382 ttacatcagttatacgtttaaaagttgtcgttgcatgttaaaatcataataaattattacaaaattttttattaa 28192308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 244
Target Start/End: Original strand, 424549 - 424646
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    ||||||| ||||||||||||| |||||  |||||||  ||| |||  ||  ||||||||| ||||||| ||||||||||||| || ||||||| ||||    
T  424549 ccgtaccctcgtgggcaacaactttagcccccttcccaatatcctgcgggtacttaagtgcccatacctgcacccattacccacactttaactatgaa 424646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 612 - 649
Target Start/End: Complemental strand, 4893009 - 4892972
Alignment:
Q  612 ccgtgtccatacccattcaaatttgcgggtaattaccc 649  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  4893009 ccgtgtccatacccattaaaatttgcgggtaattaccc 4892972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 244
Target Start/End: Original strand, 7842552 - 7842641
Alignment:
Q  155 tcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    ||||| ||||| | |||||||||||||  ||||| ||||||  |  |||||| |||||||||||| ||||||||||| ||||||| ||||    
T  7842552 tcgtgtgcaactactttagtgcccttctccatactctatgggtatctaagtgcccatacccgcactcattacccgcactttaactatgaa 7842641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 612 - 649
Target Start/End: Original strand, 20415358 - 20415395
Alignment:
Q  612 ccgtgtccatacccattcaaatttgcgggtaattaccc 649  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  20415358 ccgtgtccatacccattaaaatttgcgggtaattaccc 20415395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 612 - 649
Target Start/End: Original strand, 29185478 - 29185515
Alignment:
Q  612 ccgtgtccatacccattcaaatttgcgggtaattaccc 649  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  29185478 ccgtgtccatacccattaaaatttgcgggtaattaccc 29185515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 612 - 649
Target Start/End: Complemental strand, 33362612 - 33362575
Alignment:
Q  612 ccgtgtccatacccattcaaatttgcgggtaattaccc 649  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  33362612 ccgtgtccatacccattaaaatttgcgggtaattaccc 33362575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 618 - 750
Target Start/End: Complemental strand, 28192165 - 28192036
Alignment:
Q  618 ccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccatagcggatacttttttgcggatc 717  Q
    ||||||||||  |||||| |||||||||| |||||||| |||   |||||||||||||| | ||||||| ||| |||||| || || |||||||||| |     
T  28192165 ccatacccatataaatttacgggtaattatccataccc-aagtccggacccatgaaagcggggttttaccctacccatagtgggta-ttttttgcgggtg 28192068  T
Q  718 cccattggggtctgggtacaattgtcatcccta 750  Q
     ||| | |||||||||| |||||| ||||||||    
T  28192067 tcca-tagggtctgggtccaattgccatcccta 28192036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 216
Target Start/End: Complemental strand, 31107777 - 31107709
Alignment:
Q  148 cgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccg 216  Q
    |||| ||||||||||||||| ||| |||||||||  ||||||||||||  |||||||||  ||||||||    
T  31107777 cgtatcttcgtgggcaacaaatttggtgcccttctccataccctatgggtacttaagtgctcatacccg 31107709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 219
Target Start/End: Original strand, 38491397 - 38491469
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcac 219  Q
    ||||||| |||| |||||||| |||||| ||||||| ||||||||||||  |  |||||| ||||||||||||    
T  38491397 ccgtaccctcgtaggcaacaactttagtacccttccccataccctatgggtatctaagtgcccatacccgcac 38491469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 414 - 469
Target Start/End: Original strand, 47665579 - 47665635
Alignment:
Q  414 aaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaa 469  Q
    ||||||||||||||| |||||||| |||||||||||| ||||| || ||||||||||    
T  47665579 aaaaagttgtagttgcatgttaaaatcataataaattgttacttaaatttttattaa 47665635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 123 - 153
Target Start/End: Complemental strand, 4052531 - 4052501
Alignment:
Q  123 catacccgcgtttgtaaaaaatgtccgtacc 153  Q
    |||||||||||||||||||||||||||||||    
T  4052531 catacccgcgtttgtaaaaaatgtccgtacc 4052501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 122; Significance: 4e-62; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 112 - 334
Target Start/End: Original strand, 22829691 - 22829912
Alignment:
Q  112 gtacccatcttcatacccgcgtttgtaaaaaatgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccat 211  Q
    |||||||||  ||||||||||||||||||||||  ||||||| ||||||||||||| |||||||||||||| |||||||||||| ||| |||||| ||||    
T  22829691 gtacccatccccatacccgcgtttgtaaaaaatacccgtaccctcgtgggcaacaactttagtgcccttccccataccctatgggcacctaagtgcccat 22829790  T
Q  212 acccgcacccattacccgcattttaactgtgaacaaacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataa 311  Q
    |||||||||||||||||||||||||||| |||| |||||||         ||||||||||||||||||||| | ||| ||||||||||||||||||||||    
T  22829791 acccgcacccattacccgcattttaactatgaaaaaacaataaaaaaa-cccacaattgaaataaaactatgatccaaaaaatttcaaatcaactcataa 22829889  T
Q  312 aatagtacgaatcgtagtattta 334  Q
    |||| || |||||||||||||||    
T  22829890 aataatatgaatcgtagtattta 22829912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 124 - 333
Target Start/End: Complemental strand, 31713780 - 31713571
Alignment:
Q  124 atacccgcgtttgtaaaaaatgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccat 223  Q
    ||||| |||||||||||||||   ||||||||||| ||||| || ||||||| |||||  ||||| |||||| ||| |||||||||||||||||||| ||    
T  31713780 atacctgcgtttgtaaaaaatactcgtaccttcgtaggcaataactttagtgtccttctccatactctatgggcacctaagtgtccatacccgcacctat 31713681  T
Q  224 tacccgcattttaactgtgaacaaacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaat 323  Q
    |||||||||||||| | |||| | |||||         ||||||||||||||||||||| | ||| |||||||||||||||||||||||||| || ||||    
T  31713680 tacccgcattttaattatgaaaagacaataaaaaaaacccacaattgaaataaaactatgatccaaaaaatttcaaatcaactcataaaataatatgaat 31713581  T
Q  324 cgtagtattt 333  Q
    ||||||||||    
T  31713580 cgtagtattt 31713571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 147 - 315
Target Start/End: Complemental strand, 22306925 - 22306756
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| ||||||||||||||||||||| ||||| |||||| ||| ||||||||||||| |||||||||||||||||| |||| |    
T  22306925 ccgtaccctcgtgggcaacaactttagtgcccttcctcataccttatgggcacttaggtgcccatacccgcaccaattacccgcattttaactatgaaaa 22306826  T
Q  247 aacaatnnnnnnnta-ccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaata 315  Q
     | |||        | ||||||||||||||||| ||| | ||| |||||||||||||||| |||||||||    
T  22306825 gataataaaaaaaaacccacaattgaaataaaattatgatccaaaaaatttcaaatcaacccataaaata 22306756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 117 - 334
Target Start/End: Original strand, 31786366 - 31786589
Alignment:
Q  117 catcttcatacccgcgtttgtaaaaaatgtccg------taccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtcca 210  Q
    |||| |||||||||||||||||||||||  |||      |||| | |||||||| || ||||||| |||| | |||||||||||| ||| |||||||| |    
T  31786366 catcctcatacccgcgtttgtaaaaaatacccggacccgtacccttgtgggcaaaaactttagtgtcctttcccataccctatgggcacctaagtgtcta 31786465  T
Q  211 tacccgcacccattacccgcattttaactgtgaacaaacaatnnnnnnnta--ccacaattgaaataaaactataacccataaaatttcaaatcaactca 308  Q
    ||||||||||||||||||||||||||||| |||| | | |||        |  ||||||||||||||||||||| | ||| ||||||||||||||||||     
T  31786466 tacccgcacccattacccgcattttaactatgaaaagataataataaaaaaacccacaattgaaataaaactatgatccaaaaaatttcaaatcaactc- 31786564  T
Q  309 taaaatagtacgaatcgtagtattta 334  Q
     |||||| || |||||||||||||||    
T  31786565 -aaaataatatgaatcgtagtattta 31786589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 112 - 334
Target Start/End: Original strand, 22247813 - 22248035
Alignment:
Q  112 gtacccatcttcatacccgcgtttgtaaaaaatgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccat 211  Q
    |||||||||  ||||||| | |||||||||||||  |||||| | ||||||||||| |||||||||||||| |||||||||| | ||||||||||  |||    
T  22247813 gtacccatccccataccctcatttgtaaaaaatgcacgtacccttgtgggcaacaactttagtgcccttccccataccctataggcacttaagtgctcat 22247912  T
Q  212 acccgcacccattacccgcattttaactgtgaacaaacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataa 311  Q
    |||||||||||||| ||||| |||  || |||| | |||||        | |||||||||||||||||||| | ||| ||   || ||||||||| ||||    
T  22247913 acccgcacccattatccgcactttctctatgaaaagacaataaaaaaacatcacaattgaaataaaactatgatccaaaattatttaaatcaactaataa 22248012  T
Q  312 aatagtacgaatcgtagtattta 334  Q
    |||| ||| ||| ||||||||||    
T  22248013 aataatacaaattgtagtattta 22248035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 147 - 251
Target Start/End: Original strand, 52595533 - 52595637
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| |||||| ||| || |||||||||||||  |||||||||||||||||||||||||||||||||| ||||||| |||| |    
T  52595533 ccgtaccctcgtgggcaacaactttagtccccatcatcataccctatgggtacttaagtgtccatacccgcacccattacccgcactttaactatgaaaa 52595632  T
Q  247 aacaa 251  Q
    |||||    
T  52595633 aacaa 52595637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 148 - 335
Target Start/End: Complemental strand, 29405994 - 29405808
Alignment:
Q  148 cgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaacaa 247  Q
    |||||| ||||||||||||| |||||||||||||| ||||| |||||| ||| |||||| ||||||| |||||||||| ||||| |||  || |||| |     
T  29405994 cgtaccctcgtgggcaacaactttagtgcccttccccatactctatgggcacctaagtgcccatacctgcacccattatccgcactttctctatgaaaag 29405895  T
Q  248 acaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtatttaa 335  Q
    ||||        || |||||||||||||||||||| | ||| ||   || ||||||||| ||||||||||||||||||||||||||||    
T  29405894 acaa-aaaaaaatatcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaatagtacgaatcgtagtatttaa 29405808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 8806048 - 8805959
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcatttta 236  Q
    ||||||| ||||||| ||||| ||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||| ||||    
T  8806048 ccgtaccctcgtgggtaacaactttagtgcccttcctcataacctatgggcacttaagtgcccatacccgcacccattacccgcacttta 8805959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 147 - 244
Target Start/End: Original strand, 11034684 - 11034781
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    ||||||| ||||||||||||| |||||||||||||| |||||||||||| ||| |||||| |||||||||||||||||| ||||| ||||||| ||||    
T  11034684 ccgtaccctcgtgggcaacaactttagtgcccttccccataccctatgggcacctaagtgcccatacccgcacccattatccgcagtttaactctgaa 11034781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 123 - 239
Target Start/End: Complemental strand, 44293144 - 44293027
Alignment:
Q  123 catacccgcgtttgtaaaaaa-tgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcaccc 221  Q
    ||||| ||||||||||||||| | || ||||||||||||||||||| |||||||||||| | ||||| |||||||||| ||||||||  |||||||||||    
T  44293144 catacgcgcgtttgtaaaaaaatatctgtaccttcgtgggcaacaactttagtgccctttcccatactctatggacacctaagtgtctgtacccgcaccc 44293045  T
Q  222 attacccgcattttaact 239  Q
    ||||||| || |||||||    
T  44293044 attacccacactttaact 44293027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 147 - 333
Target Start/End: Original strand, 45097550 - 45097736
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| |||||||||||||  |||||||||||| ||| |||||| | |||||||||||||||||||||| |||  || |||| |    
T  45097550 ccgtaccctcgtgggcaacaactttagtgcccttctccataccctatgggcacctaagtgcctatacccgcacccattacccgcactttctctatgaaaa 45097649  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattt 333  Q
     |||||        | ||||||| |||||||||||| | ||| ||   || ||||||||| |||||||||||||||| |||||||||    
T  45097650 gacaataaaaaaacatcacaattaaaataaaactatgatccaaaattatttaaatcaactaataaaatagtacgaattgtagtattt 45097736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 606 - 750
Target Start/End: Complemental strand, 26337339 - 26337198
Alignment:
Q  606 ccatagccgtgtccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccatagcggatact 705  Q
    ||||| ||||| ||||||||||  |||||||||||||||||||||||||| ||||  |||||||||||||||| ||||||| ||| ||||||||| || |    
T  26337339 ccatacccgtgcccatacccatataaatttgcgggtaattacccataccc-aagcccggacccatgaaagcagggttttaccctacccatagcgggta-t 26337242  T
Q  706 tttttgcggatccccattggggtctgggtacaattgtcatcccta 750  Q
    ||||||||| | |||| | |||||||||| |||||| ||||||||    
T  26337241 tttttgcgggtgccca-tagggtctgggtccaattgccatcccta 26337198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 147 - 334
Target Start/End: Complemental strand, 52802387 - 52802201
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| |||| ||||||||| |||||||||||| ||||||||||  ||||||| ||||||||||||||| |||  || |||| |    
T  52802387 ccgtaccctcgtgggcaacaactttaatgcccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcactttctctatgaaaa 52802288  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
     |||||        | |||||||||||||||||||| | ||| ||   || ||||||||| |||||||| ||||||| ||||||||||    
T  52802287 gacaataaaaaac-atcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaataatacgaattgtagtattta 52802201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 147 - 334
Target Start/End: Original strand, 53140599 - 53140785
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| |||| ||||||||| |||||||||||| ||||||||||  ||||||| ||||||||||||||| |||  || |||| |    
T  53140599 ccgtaccctcgtgggcaacaactttaatgcccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcactttctctatgaaaa 53140698  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
     |||||        | |||||||||||||||||||| | ||| ||   || ||||||||| |||||||| ||||||| ||||||||||    
T  53140699 gacaataaaaaac-atcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaataatacgaattgtagtattta 53140785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 1758102 - 1758013
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcatttta 236  Q
    ||||||||||||||||||||| ||||| |||||||| ||||||||||||  || |||||| |||||||||||||||||||||||| ||||    
T  1758102 ccgtaccttcgtgggcaacaactttagggcccttccccataccctatgggtacctaagtgcccatacccgcacccattacccgcacttta 1758013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 147 - 244
Target Start/End: Complemental strand, 3387338 - 3387241
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    ||||||| ||||||||||||| |||||| | ||||| ||||||||||||  ||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  3387338 ccgtaccctcgtgggcaacaactttagtcctcttccccataccctatgggtacttaagtgcccatacccgcacccattacccgcactttaactatgaa 3387241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 201 - 335
Target Start/End: Original strand, 7262054 - 7262187
Alignment:
Q  201 taagtgtccatacccgcacccattacccgcattttaactgtgaacaaacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaa 300  Q
    |||||| |||||||||||||||||||||||| ||||||| |||| | |||||        ||||||| ||||||| |||||| | ||| |||||||||||    
T  7262054 taagtgcccatacccgcacccattacccgcagtttaactctgaaaagacaataaaaagc-accacaactgaaatacaactatgatccagaaaatttcaaa 7262152  T
Q  301 tcaactcataaaatagtacgaatcgtagtatttaa 335  Q
    |||||||||||||||||| |||| |||||||||||    
T  7262153 tcaactcataaaatagtatgaatggtagtatttaa 7262187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 26340353 - 26340264
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcatttta 236  Q
    ||||||| ||||||||||||| |||||||||||||| |||| ||||||| |||||||||  |||||||||||||||||||||||| ||||    
T  26340353 ccgtaccctcgtgggcaacaactttagtgcccttccccatatcctatgggcacttaagtacccatacccgcacccattacccgcacttta 26340264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 147 - 251
Target Start/End: Complemental strand, 2225079 - 2224975
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    |||||||||||||||||||||||||||| ||||||  ||||||| ||||  || ||||||  ||||||||||||||||||||||| ||||||| |||| |    
T  2225079 ccgtaccttcgtgggcaacaattttagtccccttctccatacccgatgggtacctaagtgctcatacccgcacccattacccgcactttaactatgaaaa 2224980  T
Q  247 aacaa 251  Q
    |||||    
T  2224979 aacaa 2224975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 147 - 239
Target Start/End: Complemental strand, 29149138 - 29149046
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaact 239  Q
    ||||||| ||||||||||||| |||||| ||||||| ||||||||||||  ||||||||  |||||||||||||||||||||||| |||||||    
T  29149138 ccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacttaagtacccatacccgcacccattacccgcactttaact 29149046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 147 - 251
Target Start/End: Original strand, 42755329 - 42755433
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||| ||||| |||||| ||||||| ||||||||||||| || ||||||  ||||||||||||||||||||||| ||||||| |||| |    
T  42755329 ccgtaccctcgtgggtaacaactttagtccccttccccataccctatggatacctaagtgcacatacccgcacccattacccgcactttaactatgaaaa 42755428  T
Q  247 aacaa 251  Q
    |||||    
T  42755429 aacaa 42755433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 21297414 - 21297323
Alignment:
Q  128 ccgcgtttgtaaaaaatgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcac 219  Q
    ||||||||||||||| |  ||||||  ||||||||||||| ||||||||||||||  |||||||||||| ||||||||||||||||||||||    
T  21297414 ccgcgtttgtaaaaactacccgtactctcgtgggcaacaactttagtgcccttccctataccctatggatacttaagtgtccatacccgcac 21297323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 147 - 244
Target Start/End: Original strand, 21075818 - 21075915
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    ||||||| |||||||||||| ||||||| ||||||| ||||||||||||  || |||||| ||||||||||| |||||||||||| ||||||| ||||    
T  21075818 ccgtaccctcgtgggcaacatttttagtccccttccccataccctatgggtacctaagtgcccatacccgcatccattacccgcactttaactatgaa 21075915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 392 - 488
Target Start/End: Original strand, 41780870 - 41780967
Alignment:
Q  392 tactttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaagttgtattaagatgtttta 488  Q
    |||||||||||| |||||||| ||||||||| | ||| |||||| | |||||||||||| | |||||||||||||||||||||||||||| |||||||    
T  41780870 tactttacataagttatacgttaaaaagttgcaattgcatgttatagtcataataaattgtcactaaagtttttattaagttgtattaagctgtttta 41780967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 147 - 239
Target Start/End: Complemental strand, 32655644 - 32655552
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaact 239  Q
    ||||||| ||||||||||||| |||||| ||||||| ||||||||||||  ||||| ||  |||||||||||||||||||||||| |||||||    
T  32655644 ccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacttaggtacccatacccgcacccattacccgcactttaact 32655552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 39804260 - 39804347
Alignment:
Q  148 cgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcatttta 236  Q
    ||||||||||||||||||| ||| ||||||||||| ||||||||||||  ||||||||  |||||||||||||||||||||||| ||||    
T  39804260 cgtaccttcgtgggcaacagttt-agtgcccttccccataccctatgggtacttaagtacccatacccgcacccattacccgcacttta 39804347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 147 - 239
Target Start/End: Complemental strand, 42053390 - 42053298
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaact 239  Q
    ||||||| ||||||||||||| |||||| ||||||| |||||||| |||  ||||||||  |||||||||||||||||||||||| |||||||    
T  42053390 ccgtaccctcgtgggcaacaactttagtccccttccccataccctgtgggtacttaagtacccatacccgcacccattacccgcactttaact 42053298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 147 - 239
Target Start/End: Complemental strand, 52180900 - 52180808
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaact 239  Q
    ||||||| ||||||||||||| |||||| ||||||| ||||||||||||  ||||| ||  |||||||||||||||||||||||| |||||||    
T  52180900 ccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacttaggtacccatacccgcacccattacccgcactttaact 52180808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 155 - 334
Target Start/End: Complemental strand, 56445277 - 56445097
Alignment:
Q  155 tcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaacaaacaatnn 254  Q
    ||||||||||||| ||||||| |||||| |||||| ||||| |||||||||| |||||| ||||||||||||||||| |||| |  |||| | | |||      
T  56445277 tcgtgggcaacaactttagtgtccttccccataccttatgggcacttaagtgcccatactcgcacccattacccgcactttagccatgaaaagataataa 56445178  T
Q  255 nnnnntaccacaattgaaataaaactataacccata-aaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
          |||||||||||||||||||||| | ||| |    ||| ||||||||||| |||||| || |||||||||||||||    
T  56445177 aaaaacaccacaattgaaataaaactatgatccaaatttttttaaaatcaactcacaaaataatatgaatcgtagtattta 56445097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 147 - 334
Target Start/End: Original strand, 33733366 - 33733550
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||| ||||||||  |||||||| |||| |||||| |||||||||||| |||||||||| ||||||| |||||||||||||||| |||  || |||| |    
T  33733366 ccgtatcttcgtggataacaattt-agtgtccttccccataccctatgggcacttaagtgcccatacctgcacccattacccgcactttctctatgaaaa 33733464  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
     |||||        | |||||||| ||||||||||| ||||| ||   || ||||||||| |||||||| ||||||||||||||||||    
T  33733465 gacaataaaaaac-atcacaattg-aataaaactatgacccaaaattatttaaatcaactaataaaataatacgaatcgtagtattta 33733550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 147 - 244
Target Start/End: Original strand, 12185767 - 12185864
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    ||||||| ||||||||||||| |||||| ||||||| ||||||||||||  || | |||| ||||||||||| |||||||||||| ||||||| ||||    
T  12185767 ccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacctcagtgcccatacccgcatccattacccgcactttaactatgaa 12185864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 147 - 244
Target Start/End: Original strand, 12187759 - 12187856
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    ||||||| ||||||||||||| |||||| ||||||| ||||||||||||  || | |||| ||||||||||| |||||||||||| ||||||| ||||    
T  12187759 ccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacctcagtgcccatacccgcatccattacccgcactttaactatgaa 12187856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 211 - 334
Target Start/End: Complemental strand, 23349455 - 23349330
Alignment:
Q  211 tacccgcacccattacccgcattttaactgtgaacaaacaat--nnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactca 308  Q
    ||||||||||||||||||||||||||||| ||||   |||||          |||||||||||||||||||||| |  || ||| |||||||||||||||    
T  23349455 tacccgcacccattacccgcattttaactatgaaatgacaataaaaaaaaccaccacaattgaaataaaactatgattcaaaaattttcaaatcaactca 23349356  T
Q  309 taaaatagtacgaatcgtagtattta 334  Q
    |||||||||| |||||||||||||||    
T  23349355 taaaatagtatgaatcgtagtattta 23349330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 28234294 - 28234206
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcatttta 236  Q
    ||||||| |||||| |||||| ||||||||||||||  ||||||||||| ||||| |||| |||||||||||||||||||||||| ||||    
T  28234294 ccgtaccctcgtggacaacaactttagtgcccttcccaataccctatgggcactt-agtgcccatacccgcacccattacccgcacttta 28234206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 261 - 334
Target Start/End: Original strand, 41780746 - 41780819
Alignment:
Q  261 accacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
    ||||||||||||||||||| || | ||| ||||||||||||||||||||||||||||| ||||| |||||||||    
T  41780746 accacaattgaaataaaacaatgatccaaaaaatttcaaatcaactcataaaatagtatgaatcttagtattta 41780819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 144 - 334
Target Start/End: Original strand, 46080703 - 46080893
Alignment:
Q  144 tgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtga 243  Q
    |||||||| | ||||||||||||| ||||||| | |||  |||||||||||  ||||||||||||||||||||||| |||||||| || |||  || |||    
T  46080703 tgtccgtagcctcgtgggcaacaactttagtgtcattctccataccctatgagcacttaagtgtccatacccgcactcattacccacactttctctatga 46080802  T
Q  244 acaaacaatnnnnnnntaccacaattgaaataaaactataacccataaaat--ttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
    | | |||||        | |||||||||||||||||||| |   |||||||  || ||||||| | ||||||||||||||||| |||||||||    
T  46080803 aaagacaataaaaaaacatcacaattgaaataaaactatga--tataaaattatttaaatcaattgataaaatagtacgaatcatagtattta 46080893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 150 - 244
Target Start/End: Complemental strand, 2721352 - 2721258
Alignment:
Q  150 taccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    |||| ||||||||||||| |||||| ||||||| ||||||||||||  || | |||| ||||||||||| |||||||||||| ||||||| ||||    
T  2721352 taccctcgtgggcaacaactttagtccccttccccataccctatgggtacctcagtgcccatacccgcatccattacccgcactttaactatgaa 2721258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 261 - 335
Target Start/End: Complemental strand, 27791061 - 27790987
Alignment:
Q  261 accacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtatttaa 335  Q
    |||||||||||||||||| ||||| ||| |   ||||| ||||||||||||||||||||||||||||||||||||    
T  27791061 accacaattgaaataaaattataatccagattttttcatatcaactcataaaatagtacgaatcgtagtatttaa 27790987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 144 - 334
Target Start/End: Original strand, 33983122 - 33983310
Alignment:
Q  144 tgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtga 243  Q
    |||||||||| |||||||||| || |||||||||||| |  ||| |||||||  |  |||||| |||||||||||||||||||||||| ||||||| |||    
T  33983122 tgtccgtaccctcgtgggcaataactttagtgccctttcctatatcctatgggtatctaagtgcccatacccgcacccattacccgcactttaactatga 33983221  T
Q  244 acaaacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
    | ||| |||       |  |||||||||||||||| ||| | | | |   ||| |||| |||| |||||||| ||||||||||||||||||    
T  33983222 aaaaataatgaaaacat--cacaattgaaataaaattatgatcaaaatcttttaaaatgaactaataaaataatacgaatcgtagtattta 33983310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 147 - 244
Target Start/End: Original strand, 14576780 - 14576877
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    ||||||| |||||||||||||||||||| ||||||| |||| |||||||  || | |||| ||||||||||| |||||| ||||| ||||||| ||||    
T  14576780 ccgtaccctcgtgggcaacaattttagtccccttccccatatcctatgggtacctcagtgcccatacccgcatccattatccgcactttaactatgaa 14576877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 403 - 469
Target Start/End: Complemental strand, 26340106 - 26340039
Alignment:
Q  403 aattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaa 469  Q
    |||||||||| ||||||||  |||||||||||||| |||||||||||| |||||||||||||||||||    
T  26340106 aattatacgttaaaaagttacagttgtatgttaaaatcataataaattgttactaaagtttttattaa 26340039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 396 - 474
Target Start/End: Complemental strand, 28234056 - 28233977
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaagttgt 474  Q
    |||||| | |||||||| |||| |||||||||| |||||||| |||||||||||| ||||||||||||||||||| ||||    
T  28234056 ttacatcagttatacgttaaaaggttgtagttgcatgttaaaatcataataaattgttactaaagtttttattaatttgt 28233977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 396 - 474
Target Start/End: Original strand, 39804497 - 39804576
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaagttgt 474  Q
    |||||| | |||||||| ||||||||||||||| |||||||| ||||||| |||| ||||||||||||||||||| ||||    
T  39804497 ttacatcagttatacgttaaaaagttgtagttgcatgttaaaatcataattaattgttactaaagtttttattaatttgt 39804576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 251
Target Start/End: Original strand, 41003305 - 41003412
Alignment:
Q  144 tgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtga 243  Q
    |||| ||||| | ||||||||||| |||| | ||||||| |||| |||||||  || ||||||  ||||||||||||||||||||||| ||||||| |||    
T  41003305 tgtctgtacccttgtgggcaacaactttaatccccttccccatatcctatgggtacctaagtgctcatacccgcacccattacccgcactttaactatga 41003404  T
Q  244 acaaacaa 251  Q
    | ||||||    
T  41003405 aaaaacaa 41003412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 8805809 - 8805735
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaa 469  Q
    |||||| | |||||||| ||| ||||||||||| |||||||| |||||||||||| |||||||||||||||||||    
T  8805809 ttacatcagttatacgttaaacagttgtagttgcatgttaaaatcataataaattgttactaaagtttttattaa 8805735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 147 - 237
Target Start/End: Complemental strand, 51807053 - 51806963
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaa 237  Q
    ||||||| ||||||| || ||||||||||||| ||| ||||||||||||  || |||||| ||||||| | |||||||||||||| |||||    
T  51807053 ccgtaccctcgtgggtaataattttagtgcccctccccataccctatggtaacctaagtgcccatacctgtacccattacccgcactttaa 51806963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 252
Target Start/End: Complemental strand, 22313477 - 22313372
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| || |||| ||||| ||||||| |||||| |||| |||||||  |  ||||||||||||||||||| ||||| ||||| ||||||| |||| |    
T  22313477 ccgtaccctcatgggaaacaactttagtgtccttccccatatcctatgggtatctaagtgtccatacccgcactcattatccgcactttaactatgaaaa 22313378  T
Q  247 aacaat 252  Q
    ||||||    
T  22313377 aacaat 22313372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 613 - 714
Target Start/End: Complemental strand, 28233845 - 28233746
Alignment:
Q  613 cgtgtccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccatagcggatacttttttgc 712  Q
    |||| ||||||||||  ||||||||||||||||| |||||||| ||||  |||||||||||||| | ||||||| ||| ||||||||| || ||||||||    
T  28233845 cgtgcccatacccatataaatttgcgggtaattatccataccc-aagcccggacccatgaaagcggggttttaccctacccatagcgggta-ttttttgc 28233748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 226
Target Start/End: Original strand, 41780659 - 41780724
Alignment:
Q  161 gcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattac 226  Q
    ||||||| ||||||||||||||  ||| | ||||| ||||||||||||||||||||||||||||||    
T  41780659 gcaacaactttagtgcccttccctatatcttatgggcacttaagtgtccatacccgcacccattac 41780724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 618 - 750
Target Start/End: Original strand, 39804702 - 39804831
Alignment:
Q  618 ccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccatagcggatacttttttgcggatc 717  Q
    ||||||||||  |||||||||||||||||||||||||| ||||   ||||||| |||||   ||||||  ||| ||||||||| || |||||||||| |     
T  39804702 ccatacccatataaatttgcgggtaattacccataccc-aagcccagacccataaaagcgaggttttatcctacccatagcgggta-ttttttgcgggtg 39804799  T
Q  718 cccattggggtctgggtacaattgtcatcccta 750  Q
    |||| | |||||||||| |||||||||||||||    
T  39804800 ccca-tagggtctgggtccaattgtcatcccta 39804831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 54979252 - 54979176
Alignment:
Q  163 aacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaact 239  Q
    ||||| |||||| ||||||| ||||||||||||  ||||||||   ||||||||||||||||||||||| |||||||    
T  54979252 aacaactttagtccccttccccataccctatgggtacttaagtacacatacccgcacccattacccgcactttaact 54979176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 334
Target Start/End: Complemental strand, 34459753 - 34459568
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||| ||||||| ||||||| | |||||||||||||||||  |  ||||||  |||||  |||| ||||||||||| ||||||| |||| |    
T  34459753 ccgtaccctcgtgtgcaacaactttagtgtcattcctcataccctatgggtatctaagtgcacatacttgcactcattacccgcactttaactatgaaaa 34459654  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
     |||||       |  ||||||||||||||||||||   | | | | ||| |||| ||||||||||||| || |||||||||||||||    
T  34459653 gacaataaaaacat--cacaattgaaataaaactatggtcaaaatattttaaaattaactcataaaataatatgaatcgtagtattta 34459568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 396 - 466
Target Start/End: Original strand, 52014007 - 52014078
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttat 466  Q
    |||||| | |||||||| ||||||||||||||| |||||||| |||||||||||| |||||||||| |||||    
T  52014007 ttacatcagttatacgttaaaaagttgtagttgcatgttaaagtcataataaattgttactaaagtctttat 52014078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 294 - 332
Target Start/End: Complemental strand, 8644208 - 8644170
Alignment:
Q  294 tttcaaatcaactcataaaatagtacgaatcgtagtatt 332  Q
    |||||||||||||||||||||||||||||||||||||||    
T  8644208 tttcaaatcaactcataaaatagtacgaatcgtagtatt 8644170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 597 - 722
Target Start/End: Original strand, 41781074 - 41781198
Alignment:
Q  597 gtacagtatccatagccgtgtccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccata 696  Q
    ||||||| |||||| | |||||| |||||||||||||| |||||||||||||| ||||| || |  |||||||| ||| |   ||||||| ||| |||||    
T  41781074 gtacagtgtccatacctgtgtccgtacccattcaaattggcgggtaattacccgtacccaaatc-cggacccataaaaacgaagttttaccctacccata 41781172  T
Q  697 gcggatacttttttgcggatccccat 722  Q
     |||||| |||||||| ||| |||||    
T  41781173 acggatatttttttgcagatacccat 41781198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 251
Target Start/End: Original strand, 652233 - 652337
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    |||||||||||||||||||||   |||| ||||||  ||||||||||||  || |||||| || ||||||||| |||||||| || ||||| | |||| |    
T  652233 ccgtaccttcgtgggcaacaacaatagtccccttctccataccctatgggtacctaagtgcccttacccgcactcattacccacactttaattatgaaaa 652332  T
Q  247 aacaa 251  Q
    |||||    
T  652333 aacaa 652337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 219
Target Start/End: Original strand, 23147402 - 23147474
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcac 219  Q
    |||||||||||||||||| || ||||||  | |||| |||||||||| |  ||||||||||||||||||||||    
T  23147402 ccgtaccttcgtgggcaagaactttagtctcattccccataccctataggtacttaagtgtccatacccgcac 23147474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 244
Target Start/End: Original strand, 29994309 - 29994405
Alignment:
Q  148 cgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    |||||||||||||||||||| ||||||||||||   ||||  ||||||  || ||| ||||| |||| ||| |||||||||||| ||||||| ||||    
T  29994309 cgtaccttcgtgggcaacaactttagtgcccttttccatattctatgggtacctaaatgtccgtacctgcatccattacccgcactttaactatgaa 29994405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 145 - 224
Target Start/End: Original strand, 24486558 - 24486637
Alignment:
Q  145 gtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccatt 224  Q
    ||||||||||| ||||| ||||| ||||||| | || | |||||||||||||||| ||||||  |||||||| |||||||    
T  24486558 gtccgtacctttgtgggtaacaactttagtgtcatttcccataccctatggacacctaagtgatcatacccgtacccatt 24486637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 396 - 470
Target Start/End: Complemental strand, 56445047 - 56444972
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaag 470  Q
    |||||| | |||||||| ||||||||||||||  |||||||| || ||||||||| |||||||||| |||||||||    
T  56445047 ttacatcagttatacgttaaaaagttgtagttccatgttaaagtcctaataaattgttactaaagtctttattaag 56444972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 294 - 332
Target Start/End: Original strand, 8614679 - 8614717
Alignment:
Q  294 tttcaaatcaactcataaaatagtacgaatcgtagtatt 332  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  8614679 tttcaaatcaactcataaaatagtacgaatcatagtatt 8614717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 9930443 - 9930495
Alignment:
Q  163 aacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccg 216  Q
    |||||||||||||| |||||||||| | ||||||||| ||||||||||||||||    
T  9930443 aacaattttagtgcacttcctcata-cttatggacacctaagtgtccatacccg 9930495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 612 - 649
Target Start/End: Original strand, 22248262 - 22248299
Alignment:
Q  612 ccgtgtccatacccattcaaatttgcgggtaattaccc 649  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  22248262 ccgtgtccatacccattaaaatttgcgggtaattaccc 22248299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 612 - 649
Target Start/End: Original strand, 53141012 - 53141049
Alignment:
Q  612 ccgtgtccatacccattcaaatttgcgggtaattaccc 649  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  53141012 ccgtgtccatacccattaaaatttgcgggtaattaccc 53141049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 2073726 - 2073686
Alignment:
Q  155 tcgtgggcaacaattttagtgcccttcctcataccctatgg 195  Q
    ||||||||||||| |||||||||||||| ||||||||||||    
T  2073726 tcgtgggcaacaactttagtgcccttccccataccctatgg 2073686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 619 - 655
Target Start/End: Complemental strand, 21297082 - 21297046
Alignment:
Q  619 catacccattcaaatttgcgggtaattacccataccc 655  Q
    |||| ||||||||||||||||||||||||||||||||    
T  21297082 catatccattcaaatttgcgggtaattacccataccc 21297046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 239
Target Start/End: Original strand, 25938361 - 25938445
Alignment:
Q  155 tcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaact 239  Q
    |||||| |||||| |||||| ||||||  |||||| | |||  ||||||||  |||||||||||||||||||| ||| |||||||    
T  25938361 tcgtggacaacaactttagtccccttctccataccatgtgggtacttaagtacccatacccgcacccattaccagcactttaact 25938445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 251
Target Start/End: Original strand, 38000580 - 38000684
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    |||||||  |||||||||||| ||||||  |||||| |||||| |||||  || |||||| ||||||||||| |||||| | | | ||||||| |||| |    
T  38000580 ccgtacccacgtgggcaacaactttagtctccttccccataccttatgggtacctaagtgcccatacccgcatccattatctgaactttaactatgaaaa 38000679  T
Q  247 aacaa 251  Q
    |||||    
T  38000680 aacaa 38000684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 237
Target Start/End: Original strand, 55760286 - 55760370
Alignment:
Q  153 cttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaa 237  Q
    |||||||||||||||||||| ||||| ||| ||| |||||||||||  ||| ||||| ||  ||| | ||||||||||| |||||    
T  55760286 cttcgtgggcaacaattttactgcccgtccccatgccctatggacatctaaatgtccgtattcgcgcacattacccgcactttaa 55760370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 3095035 - 3094992
Alignment:
Q  201 taagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    |||||| |||||||||||||||||||||||| ||||||| ||||    
T  3095035 taagtgcccatacccgcacccattacccgcactttaactatgaa 3094992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 181
Target Start/End: Complemental strand, 23349543 - 23349476
Alignment:
Q  114 acccatcttcatacccgcgtttgtaaaaaatgtccgtaccttcgtgggcaacaattttagtgcccttc 181  Q
    |||||||| ||||  || |||||||||||||||| ||||| || |||||||||| ||||||||| |||    
T  23349543 acccatctccatattcgtgtttgtaaaaaatgtctgtaccctcatgggcaacaactttagtgccattc 23349476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 614 - 649
Target Start/End: Complemental strand, 52801972 - 52801937
Alignment:
Q  614 gtgtccatacccattcaaatttgcgggtaattaccc 649  Q
    ||||||||||||||| ||||||||||||||||||||    
T  52801972 gtgtccatacccattaaaatttgcgggtaattaccc 52801937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 14595296 - 14595378
Alignment:
Q  155 tcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaa 237  Q
    ||||||| ||||| ||||||| | |||  |||||| ||||||||| ||||||  |||||||| | |||||||||||| |||||    
T  14595296 tcgtgggtaacaactttagtgtcattctccataccttatggacacctaagtgctcatacccgtatccattacccgcactttaa 14595378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 612 - 649
Target Start/End: Complemental strand, 29405588 - 29405551
Alignment:
Q  612 ccgtgtccatacccattcaaatttgcgggtaattaccc 649  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  29405588 ccgtgtccatatccattaaaatttgcgggtaattaccc 29405551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 612 - 649
Target Start/End: Complemental strand, 52801933 - 52801896
Alignment:
Q  612 ccgtgtccatacccattcaaatttgcgggtaattaccc 649  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  52801933 ccgtgcccatacccattaaaatttgcgggtaattaccc 52801896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 2e-48; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 123 - 330
Target Start/End: Original strand, 8340091 - 8340298
Alignment:
Q  123 catacccgcgtttgtaaaaaatgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcaccca 222  Q
    ||||||||||||||||||||||||| ||||| |||||   ||||| |||| ||||||||| ||||||| |||| ||| |||||| ||||||||||||| |    
T  8340091 catacccgcgtttgtaaaaaatgtctgtaccctcgtgaaaaacaactttaatgcccttccccatacccaatgggcacctaagtgcccatacccgcaccta 8340190  T
Q  223 ttacccgcattttaactgtgaacaaacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaa 322  Q
    ||||||||||||||||| |||| | |||||        |||||||||||||||||||||| | ||| |||||||| |||||||||||||||||||| |||    
T  8340191 ttacccgcattttaactatgaaaagacaataaaaaaccaccacaattgaaataaaactatgatccaaaaaatttcgaatcaactcataaaatagtatgaa 8340290  T
Q  323 tcgtagta 330  Q
    ||||||||    
T  8340291 tcgtagta 8340298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 146 - 334
Target Start/End: Original strand, 35688275 - 35688463
Alignment:
Q  146 tccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaac 245  Q
    |||||||| | ||||||||||| |||||||||||||| |||| ||||||| ||| |||||| |||||||||||||||||||||||||||||||| ||||     
T  35688275 tccgtacccttgtgggcaacaactttagtgcccttccccatatcctatgggcacctaagtgcccatacccgcacccattacccgcattttaactatgaaa 35688374  T
Q  246 aaacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
    | |||||         ||||||||||||||||||||| | ||| |||||||||||||||||||||||||| || |||||||||||||||    
T  35688375 agacaataaaaaaaacccacaattgaaataaaactatgatccaaaaaatttcaaatcaactcataaaataatatgaatcgtagtattta 35688463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 148 - 334
Target Start/End: Original strand, 19454760 - 19454947
Alignment:
Q  148 cgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaacaa 247  Q
    |||||| ||||||||||||| |||||| ||||||| ||||| |||||| |||||||||||||||| | ||||||||||||| |||||||||| |||| ||    
T  19454760 cgtaccctcgtgggcaacaactttagtacccttccccatactctatgggcacttaagtgtccatatctgcacccattacccacattttaactatgaaaaa 19454859  T
Q  248 -acaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
     |||||         ||||||||||||||||| ||| | ||| |||||||||||||||||||||||||| || |||||||||||||||    
T  19454860 gacaataaaaaaaacccacaattgaaataaaattatgatccaaaaaatttcaaatcaactcataaaataatatgaatcgtagtattta 19454947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 145 - 334
Target Start/End: Complemental strand, 30248189 - 30248002
Alignment:
Q  145 gtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    ||||||||| ||||||||||||| |||||||||||||| |||||||||||| || ||||||| ||||| |||||||||||||||||| |||  || ||||    
T  30248189 gtccgtaccctcgtgggcaacaactttagtgcccttccccataccctatgggcaattaagtgcccata-ccgcacccattacccgcactttctctatgaa 30248091  T
Q  245 caaacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
     | |||||       || |||||||||||||||||||| | ||| ||   || ||||||||| |||||||||||||||||||||||||||    
T  30248090 aagacaat-aaataatatcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaatagtacgaatcgtagtattta 30248002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 147 - 334
Target Start/End: Complemental strand, 42096876 - 42096690
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    |||||||||||||| |||||| |||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||| |||  || |||| |    
T  42096876 ccgtaccttcgtggacaacaactttagtgcccttccccataccctatgggcacttaagtgcccatacccgcacccattacccgcactttctctatgaaaa 42096777  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
     |||||        | |||||||||||||||||||| | ||| ||   || |||||| || |||||||||||||||||||| ||||||    
T  42096776 gacaataaaaaac-atcacaattgaaataaaactatgatccaaaattatttaaatcatctaataaaatagtacgaatcgtaatattta 42096690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 123 - 334
Target Start/End: Original strand, 48080012 - 48080221
Alignment:
Q  123 catacccgcgtttgtaaaaaatgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcaccca 222  Q
    ||||||| | |||||||||| | |||||||| ||||||||||||| |||||||||||||| |||| |||||||  || ||||||||||||||||||| ||    
T  48080012 catacccacatttgtaaaaattatccgtaccctcgtgggcaacaactttagtgcccttccccatatcctatgggtacctaagtgtccatacccgcactca 48080111  T
Q  223 ttacccgcattttaactgtgaacaaacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaa 322  Q
    ||||||||| ||||||| |||| | |||||       || ||||||||||||||||||||   | | |   ||| |||| ||||||||||||| || |||    
T  48080112 ttacccgcactttaactatgaaaagacaat--aaaaatatcacaattgaaataaaactatggtctacatcttttaaaattaactcataaaataatatgaa 48080209  T
Q  323 tcgtagtattta 334  Q
    ||||||||||||    
T  48080210 tcgtagtattta 48080221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 38694950 - 38694858
Alignment:
Q  144 tgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcatttta 236  Q
    |||||||||| |||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  38694950 tgtccgtaccctcgtgggcaaaaactttagtgcccttccccataccctatggacacttaagtgtccatacccgcactcattacccgcacttta 38694858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 147 - 334
Target Start/End: Complemental strand, 45079339 - 45079153
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| |||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||| |||  |  |||| |    
T  45079339 ccgtaccctcgtgggcaacaactttagtgcccttccccataccctatgggcacttaagtgcccatacccgcacccattacccgcactttctcgatgaaaa 45079240  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
     |||||        | |||||||||||||||||||| | ||| ||   || ||||||||| |||||||| || |||||||||||||||    
T  45079239 gacaataaaaaac-atcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaataatatgaatcgtagtattta 45079153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 19618660 - 19618751
Alignment:
Q  148 cgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaact 239  Q
    |||||| ||||||||||||| |||||| ||||||| ||||||||||||| || |||||| |||||||||||||||||||||||| |||||||    
T  19618660 cgtaccctcgtgggcaacaactttagttcccttccccataccctatggatacctaagtgcccatacccgcacccattacccgcactttaact 19618751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 397 - 496
Target Start/End: Original strand, 27346784 - 27346884
Alignment:
Q  397 tacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaagttgtattaagatgttttagcgttag 495  Q
    ||||| |||||||||| ||||||||| ||||| |||||||| |||||||||||| ||||||| ||||||||||||||| |||||| |||||||| |||||    
T  27346784 tacatcaattatacgttaaaaagttgcagttgcatgttaaagtcataataaattgttactaaggtttttattaagttgcattaagctgttttagggttag 27346883  T
Q  496 g 496  Q
    |    
T  27346884 g 27346884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 147 - 239
Target Start/End: Complemental strand, 44792776 - 44792684
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaact 239  Q
    ||||||| ||||||||||||| |||||| ||||||| ||||||||||||  ||||||||  |||||||||||||||||||||||| |||||||    
T  44792776 ccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacttaagtacccatacccgcacccattacccgcactttaact 44792684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 148 - 239
Target Start/End: Original strand, 41923944 - 41924035
Alignment:
Q  148 cgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaact 239  Q
    |||||| ||||||||||||| |||||| ||||||| ||||| ||||||  ||||||||||| |||||||||||||||||||||| |||||||    
T  41923944 cgtaccctcgtgggcaacaactttagtccccttccccatactctatgggtacttaagtgtctatacccgcacccattacccgcactttaact 41924035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 147 - 318
Target Start/End: Original strand, 48583704 - 48583873
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| ||| |||||||||| |||||||||||| ||||||||||  |||||| |||  ||||||||||| ||||||  |||| |    
T  48583704 ccgtaccctcgtgggcaacaacttt-gtgcccttccccataccctatgggcacttaagtgcacatacctgcagtcattacccgcactttaaccatgaaaa 48583802  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagta 318  Q
     |||||        |||||||||||||||||| ||| | ||  ||||||||||||||||| |||||||||||    
T  48583803 gacaataaaaaac-accacaattgaaataaaattatgatcctcaaaatttcaaatcaactaataaaatagta 48583873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 32995208 - 32995297
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcatttta 236  Q
    ||||||| |||||| |||||| ||||||| |||||| |||||||||||| ||||||||||  ||||||||||||||||||||||| ||||    
T  32995208 ccgtaccctcgtggacaacaactttagtgtccttccacataccctatgggcacttaagtgctcatacccgcacccattacccgcacttta 32995297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 35732210 - 35732291
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattaccc 228  Q
    ||||||| ||||||||||||||||||||| |||||| || ||||||||| |||||||||| |||||||||||| ||||||||    
T  35732210 ccgtaccctcgtgggcaacaattttagtgtccttccccagaccctatgggcacttaagtgcccatacccgcactcattaccc 35732291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 147 - 239
Target Start/End: Complemental strand, 24987540 - 24987448
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaact 239  Q
    ||||||| ||||||||||||| |||||| ||||||| ||||||||||||  ||||||||  ||||||||||| |||||||||||| |||||||    
T  24987540 ccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacttaagtacccatacccgcatccattacccgcactttaact 24987448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 145 - 334
Target Start/End: Complemental strand, 41410393 - 41410205
Alignment:
Q  145 gtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    ||||||||| ||||||||||||| ||||||||||||||  | ||||||||  ||| |||||| |||||||||||| |||||||| || |||  || ||||    
T  41410393 gtccgtaccctcgtgggcaacaactttagtgcccttccctacaccctatgagcacctaagtgcccatacccgcacgcattacccacactttctctatgaa 41410294  T
Q  245 caaacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
     | |||||        | |||||||||||||||||||| | ||| ||   || ||||||||| ||||||||||| |||||||||||||||    
T  41410293 aagacaataaaaaac-atcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaatagtatgaatcgtagtattta 41410205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 144 - 244
Target Start/End: Original strand, 49359933 - 49360033
Alignment:
Q  144 tgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtga 243  Q
    |||||||||| ||||||||||||| |||||| ||||||| ||||||||||||  || | |||  |||||||||||||||||||||||| ||||||| |||    
T  49359933 tgtccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacctcagtacccatacccgcacccattacccgcactttaactatga 49360032  T
Q  244 a 244  Q
    |    
T  49360033 a 49360033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 396 - 474
Target Start/End: Original strand, 43657471 - 43657550
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaagttgt 474  Q
    |||||| | |||||||| ||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||    
T  43657471 ttacatcagttatacgttaaaaagttgtagttgcatgttaaaatcataataaattgttactaaagtttttattaagttgt 43657550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 405 - 470
Target Start/End: Original strand, 32995457 - 32995523
Alignment:
Q  405 ttatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaag 470  Q
    |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  32995457 ttatacgttaaaaaattgtagttgtatgttaaaatcataataaattattactaaagtttttattaag 32995523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 395 - 480
Target Start/End: Original strand, 48584227 - 48584313
Alignment:
Q  395 tttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaagttgtattaag 480  Q
    ||||||| |||||||||| ||||||||| ||||| |||||||| |||||||||||| |||||| |||||||||||||||| ||||||    
T  48584227 tttacatcaattatacgttaaaaagttgcagttgcatgttaaagtcataataaattgttactacagtttttattaagttgcattaag 48584313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 150 - 251
Target Start/End: Original strand, 6408551 - 6408652
Alignment:
Q  150 taccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaacaaac 249  Q
    |||| ||||||||||||| |||||| | ||||| | ||||||||||  || |||||| |||||||||||||||||||||||| ||||||| |||| ||||    
T  6408551 taccctcgtgggcaacaactttagtcctcttccccgtaccctatgggtacctaagtgcccatacccgcacccattacccgcactttaactatgaaaaaac 6408650  T
Q  250 aa 251  Q
    ||    
T  6408651 aa 6408652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 147 - 244
Target Start/End: Complemental strand, 23299654 - 23299557
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    ||||||| | ||||||||||| ||||||| | |||| ||||||||||||  |  |||||| |||||||||||||||||||||||||||||||| ||||    
T  23299654 ccgtacccttgtgggcaacaactttagtgtcattccccataccctatgggtatctaagtgcccatacccgcacccattacccgcattttaactatgaa 23299557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 49374775 - 49374856
Alignment:
Q  155 tcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcatttta 236  Q
    |||||| |||||||||||||| |||| | |||||||||||| ||||||||||  ||||||||||||||||||||||| ||||    
T  49374775 tcgtggacaacaattttagtgtcctttcccataccctatgggcacttaagtgctcatacccgcacccattacccgcacttta 49374856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 155 - 244
Target Start/End: Complemental strand, 50508997 - 50508908
Alignment:
Q  155 tcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    |||||| |||||| |||||||||||| ||||||||||||||  ||||||||| ||||||| ||||||| |||||||| ||||||| ||||    
T  50508997 tcgtggacaacaactttagtgccctttctcataccctatgggaacttaagtgcccatacctgcacccactacccgcactttaactatgaa 50508908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 597 - 709
Target Start/End: Complemental strand, 10084957 - 10084846
Alignment:
Q  597 gtacagtatccatagccgtgtccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccata 696  Q
    |||||||  ||||| ||||| ||||||||||  |||||||||||||||||||||||||| ||||  |||||||||||||| | ||||||| ||| |||||    
T  10084957 gtacagtgcccatacccgtgcccatacccatataaatttgcgggtaattacccataccc-aagctcggacccatgaaagcggggttttaccctacccata 10084859  T
Q  697 gcggatacttttt 709  Q
    |||| || |||||    
T  10084858 gcgggtatttttt 10084846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 150 - 236
Target Start/End: Complemental strand, 10085391 - 10085305
Alignment:
Q  150 taccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcatttta 236  Q
    |||| ||||||||||||| |||||||||||||| ||||||||||||  |||||||||  ||||||| |||| |||||||||| ||||    
T  10085391 taccctcgtgggcaacaactttagtgcccttccccataccctatgggtacttaagtgctcataccctcacctattacccgcacttta 10085305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 150 - 236
Target Start/End: Complemental strand, 10192311 - 10192225
Alignment:
Q  150 taccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcatttta 236  Q
    |||| ||||||||||||| |||||||||||||| ||||||||||||  |||||||||  ||||||| |||| |||||||||| ||||    
T  10192311 taccctcgtgggcaacaactttagtgcccttccccataccctatgggtacttaagtgctcataccctcacctattacccgcacttta 10192225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 30964448 - 30964374
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaa 469  Q
    |||||| | |||||||| ||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||    
T  30964448 ttacatcagttatacgttaaaaagttgtagttgcatgttaaaatcataataaattgttactaaagtttttattaa 30964374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 30980260 - 30980186
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaa 469  Q
    |||||| | |||||||| ||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||    
T  30980260 ttacatcagttatacgttaaaaagttgtagttgcatgttaaaatcataataaattgttactaaagtttttattaa 30980186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 38694735 - 38694661
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaa 469  Q
    |||||| | |||||||| ||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||    
T  38694735 ttacatcagttatacgttaaaaagttgtagttgcatgttaaaatcataataaattgttactaaagtttttattaa 38694661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 5908205 - 5908294
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcatttta 236  Q
    ||||||| ||||||||||||| |||||||||||| |  ||||||||||  |||||||||| |||||||| |||| |||||||||| ||||    
T  5908205 ccgtaccctcgtgggcaacaactttagtgccctttcctataccctatgagcacttaagtgcccatacccacaccaattacccgcacttta 5908294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 147 - 244
Target Start/End: Original strand, 19873067 - 19873164
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    ||||||| ||||||||||||| |||||||||| ||| |||||  |||||  || |||||| |||||||||||||||||||| ||| ||||||| ||||    
T  19873067 ccgtaccctcgtgggcaacaactttagtgcccctccccatactttatgggtacctaagtgcccatacccgcacccattacctgcactttaactatgaa 19873164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 597 - 750
Target Start/End: Original strand, 32995644 - 32995794
Alignment:
Q  597 gtacagtatccatagccgtgtccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccata 696  Q
    |||||||  ||||| |||||  ||||||||| ||||||||||||||||||||||||||| ||||   ||||||||||||| | ||||||| ||| |||||    
T  32995644 gtacagtgcccatacccgtgctcatacccatacaaatttgcgggtaattacccataccc-aagccctgacccatgaaagcggggttttaccctacccata 32995742  T
Q  697 gcggatacttttttgcggatccccattggggtctgggtacaattgtcatcccta 750  Q
    |||| || ||||||| || |  ||| | |||||||||| |||||| ||||||||    
T  32995743 gcgggta-ttttttgtgggtgtcca-tagggtctgggtccaattgccatcccta 32995794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 113 - 237
Target Start/End: Original strand, 33118631 - 33118762
Alignment:
Q  113 tacccatcttcatacccgcgtttgtaaaaaatgtccgtaccttcgtgggcaaca-------attttagtgcccttcctcataccctatggacacttaagt 205  Q
    ||||| ||| |||||||||||||||||||||||| | ||| |||||||  ||||       ||||||||| | ||  ||||||||||||||||| |||||    
T  33118631 tacccttctccatacccgcgtttgtaaaaaatgttcatactttcgtggataacaattaacaattttagtgtcttttttcataccctatggacacctaagt 33118730  T
Q  206 gtccatacccgcacccattacccgcattttaa 237  Q
    ||||||||||  |||||||||||||| |||||    
T  33118731 gtccatacccatacccattacccgcactttaa 33118762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 155 - 244
Target Start/End: Original strand, 39352443 - 39352532
Alignment:
Q  155 tcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    ||||||||||||| |||||| ||||||| |||||||||||   || |||||| |||||||| ||||||||||||||| ||||||| ||||    
T  39352443 tcgtgggcaacaactttagtccccttccccataccctatgagtacctaagtgcccatacccacacccattacccgcactttaactatgaa 39352532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 613 - 709
Target Start/End: Complemental strand, 10191861 - 10191766
Alignment:
Q  613 cgtgtccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccatagcggatacttttt 709  Q
    |||| ||||||||||  |||||||||||||||||||||||||| ||||  |||||||||||||| | ||||||| ||| ||||||||| || |||||    
T  10191861 cgtgcccatacccatataaatttgcgggtaattacccataccc-aagctcggacccatgaaagcggggttttaccctacccatagcgggtatttttt 10191766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 615 - 698
Target Start/End: Complemental strand, 28751871 - 28751789
Alignment:
Q  615 tgtccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccatagc 698  Q
    |||||||||||||| ||||||||||||||||||||||| ||||| |  |||||||||||||| | ||||||| ||| |||||||    
T  28751871 tgtccatacccatttaaatttgcgggtaattacccata-cctaaacccggacccatgaaagcggggttttaccctacccatagc 28751789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 396 - 470
Target Start/End: Original strand, 49375008 - 49375083
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaag 470  Q
    |||||| |||||||||| |||||||| ||| || |||||||| |||||||||||| ||||||||||||||||||||    
T  49375008 ttacatcaattatacgttaaaaagttatagctgcatgttaaaatcataataaattgttactaaagtttttattaag 49375083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 263 - 333
Target Start/End: Complemental strand, 2150698 - 2150628
Alignment:
Q  263 cacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattt 333  Q
    ||||||||||||||||||||   | | | | ||||||||||||||||||||||||||||||||||||||||    
T  2150698 cacaattgaaataaaactatggtctaaatattttcaaatcaactcataaaatagtacgaatcgtagtattt 2150628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 597 - 751
Target Start/End: Original strand, 5908642 - 5908792
Alignment:
Q  597 gtacagtatccatagccgtgtccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccata 696  Q
    |||||||  ||||| ||||||| ||||||||  |||||||||||||||||| ||||||| ||||  ||| |||||||||  | ||||||| ||| |||||    
T  5908642 gtacagtgcccatacccgtgtctatacccatataaatttgcgggtaattactcataccc-aagcccgga-ccatgaaagtggggttttaccctacccata 5908739  T
Q  697 gcggatacttttttgcggatccccattggggtctgggtacaattgtcatccctat 751  Q
    |||| || |||||||||| | |||| |  ||||||||| ||||||||||||||||    
T  5908740 gcgggta-ttttttgcgggtgccca-tatggtctgggtccaattgtcatccctat 5908792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 10085153 - 10085079
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaa 469  Q
    |||||| | |||||||| |||||||| |||||| |||||||| |||||||||||| |||||||||||||||||||    
T  10085153 ttacatcagttatacgttaaaaagttctagttgcatgttaaaatcataataaattgttactaaagtttttattaa 10085079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 10192073 - 10191999
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaa 469  Q
    |||||| | |||||||| |||||||| |||||| |||||||| |||||||||||| |||||||||||||||||||    
T  10192073 ttacatcagttatacgttaaaaagttctagttgcatgttaaaatcataataaattgttactaaagtttttattaa 10191999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 43657244 - 43657314
Alignment:
Q  149 gtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcac 219  Q
    ||||| ||||||||||||| |||| ||||||||| |||||||||| | |||||||||| ||||||||||||    
T  43657244 gtaccctcgtgggcaacaactttattgcccttccccataccctataggcacttaagtgcccatacccgcac 43657314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 14418321 - 14418394
Alignment:
Q  263 cacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtatttaat 336  Q
    |||||||||| ||||| ||||   || |||||||||||||| |||||||||||||| |||||||||||||||||    
T  14418321 cacaattgaattaaaattatagttcaaaaaatttcaaatcacctcataaaatagtatgaatcgtagtatttaat 14418394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 239
Target Start/End: Original strand, 25467463 - 25467552
Alignment:
Q  150 taccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaact 239  Q
    |||| ||||||||||||| |||||||||||||| |||| | |||||  |  ||||||  ||||||||||||||||||||||| |||||||    
T  25467463 taccctcgtgggcaacaactttagtgcccttccccatatcttatgggtatctaagtgctcatacccgcacccattacccgcaatttaact 25467552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 597 - 750
Target Start/End: Complemental strand, 38694539 - 38694389
Alignment:
Q  597 gtacagtatccatagccgtgtccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccata 696  Q
    |||||||  ||||| ||||| |||||||||   |||||||||||||||||||||||||| ||||  |||||||||||||| | ||||||  ||| ||||     
T  38694539 gtacagtgcccatacccgtgcccatacccaaataaatttgcgggtaattacccataccc-aagcccggacccatgaaagcggagttttatcctacccatc 38694441  T
Q  697 gcggatacttttttgcggatccccattggggtctgggtacaattgtcatcccta 750  Q
    || |||| |||||||||| | | || | |||||||| | |||||||||||||||    
T  38694440 gcagata-ttttttgcgggtgctca-tagggtctggatccaattgtcatcccta 38694389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 244
Target Start/End: Complemental strand, 50481197 - 50481100
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    ||||||| ||||||||||||| |||||| ||||||| |||| |||||||  || | |||| |||||||||||  ||||||||||| ||||||| ||||    
T  50481197 ccgtaccctcgtgggcaacaactttagtccccttccccatagcctatgggtacctcagtgcccatacccgcattcattacccgcactttaactatgaa 50481100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 144 - 244
Target Start/End: Complemental strand, 5041190 - 5041090
Alignment:
Q  144 tgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtga 243  Q
    |||||||||| ||||||||||||| ||||||| | |||| |||||||||| |  |  |||||| ||||||| |||||||||| ||||| ||||||| |||    
T  5041190 tgtccgtaccctcgtgggcaacaactttagtgtcattccccataccctataggtatctaagtgcccatacctgcacccattatccgcactttaactatga 5041091  T
Q  244 a 244  Q
    |    
T  5041090 a 5041090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 396 - 467
Target Start/End: Complemental strand, 36679000 - 36678928
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgtt-aaatcataataaattattactaaagtttttatt 467  Q
    |||||| | ||||| || ||||||||||||||||||||| |||||||| |||||| |||||||||||||||||    
T  36679000 ttacatcagttataagttaaaaagttgtagttgtatgttaaaatcatactaaattgttactaaagtttttatt 36678928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 334
Target Start/End: Complemental strand, 22845254 - 22845078
Alignment:
Q  155 tcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaacaaacaatnn 254  Q
    ||||||||||||  |||||||||||||| || |||||| ||  || ||||||||||| |||||| |||||| ||||||||||||| |||| | |||||      
T  22845254 tcgtgggcaacagctttagtgcccttccccacaccctacgggtacctaagtgtccatgcccgcatccatta-ccgcattttaactatgaaaagacaataa 22845156  T
Q  255 nnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
         |  |||| |||||||||||||||   ||| |   ||| |||| ||||||||||||| ||||||| ||||||||||    
T  22845155 aaacat--cacatttgaaataaaactatggtccaaatttttttaaattaactcataaaataatacgaattgtagtattta 22845078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 27064174 - 27064256
Alignment:
Q  155 tcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaa 237  Q
    ||||||| ||||| ||||||||  ||||||||||||||||| ||| |||||| ||| ||||| ||||||||||| || |||||    
T  27064174 tcgtgggtaacaactttagtgcatttcctcataccctatgggcacctaagtgcccacacccgtacccattacccacactttaa 27064256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 618 - 716
Target Start/End: Original strand, 27346992 - 27347088
Alignment:
Q  618 ccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccatagcggatacttttttgcggat 716  Q
    ||||||||||| ||||||| |||||||||||||||||  || |  |||||||||||||| |  |||||| ||| |||||||||||| ||||||||||||    
T  27346992 ccatacccatttaaatttgtgggtaattacccataccaaaaccc-ggacccatgaaagcgggattttaccctacccatagcggata-ttttttgcggat 27347088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 612 - 714
Target Start/End: Original strand, 35732642 - 35732742
Alignment:
Q  612 ccgtgtccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccatagcggatacttttttg 711  Q
    |||||||||| |||||  |||||| ||||||||||||||||||| ||||  |||| ||||||||| | ||||||| ||||||||| ||| || |||||||    
T  35732642 ccgtgtccatgcccatataaatttacgggtaattacccataccc-aagcccggactcatgaaagcggggttttaccctatccataacgggta-ttttttg 35732739  T
Q  712 cgg 714  Q
    |||    
T  35732740 cgg 35732742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 293 - 335
Target Start/End: Complemental strand, 39144103 - 39144061
Alignment:
Q  293 atttcaaatcaactcataaaatagtacgaatcgtagtatttaa 335  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  39144103 atttcaaatcaactcataaaatagtacgaatcatagtatttaa 39144061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 244
Target Start/End: Complemental strand, 13735752 - 13735663
Alignment:
Q  155 tcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    ||||||||||||| |||| | ||||||| ||||||||||||  || | |||| | ||||||||||||||||| |||| ||||||| ||||    
T  13735752 tcgtgggcaacaactttaatccccttccccataccctatgggtacctcagtgccgatacccgcacccattactcgcactttaactatgaa 13735663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 396 - 474
Target Start/End: Original strand, 5908445 - 5908525
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgtt-aaatcataataaatt-attactaaagtttttattaagttgt 474  Q
    |||||| | |||||||| ||||||||||||||| ||||| |||||||||||||||  ||| ||||||||||||||| ||||    
T  5908445 ttacatcagttatacgttaaaaagttgtagttgcatgttaaaatcataataaattgtttattaaagtttttattaatttgt 5908525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 606 - 750
Target Start/End: Complemental strand, 36678795 - 36678654
Alignment:
Q  606 ccatagccgtgtccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccatagcggatact 705  Q
    ||||| ||||| ||||| ||||  |||||||||| ||||||| ||||||| ||||  ||||| |||||||| | ||||||| ||| ||||||||| || |    
T  36678795 ccatacccgtgcccatatccatataaatttgcggataattactcataccc-aagcccggacctatgaaagcggggttttaccctacccatagcgggtatt 36678697  T
Q  706 tttttgcggatccccattggggtctgggtacaattgtcatcccta 750  Q
    ||||| ||| | ||||| ||  ||||||| |||||||||||||||    
T  36678696 ttttt-cgggtgcccatagga-tctgggtccaattgtcatcccta 36678654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 263 - 334
Target Start/End: Original strand, 42881427 - 42881497
Alignment:
Q  263 cacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
    ||||||||||||||||||||    || |||| |||||||||||||||||||||||||  |||||||||||||    
T  42881427 cacaattgaaataaaactat-ggtcaaaaaaattcaaatcaactcataaaatagtacacatcgtagtattta 42881497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 267 - 334
Target Start/End: Complemental strand, 54444410 - 54444343
Alignment:
Q  267 attgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
    ||||||||||||||||   |||  || ||||||||||||||||||||||||| |||||||| ||||||    
T  54444410 attgaaataaaactatggtccaagaattttcaaatcaactcataaaatagtatgaatcgtattattta 54444343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 323
Target Start/End: Original strand, 33099620 - 33099794
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    |||||||||||||| |||||| |||| ||||||||  | ||||||||||  || | ||||  |||  |||||| ||| |||| || ||||||| |||| |    
T  33099620 ccgtaccttcgtggccaacaactttaatgcccttctccgtaccctatgggtaccttagtgcacattgccgcactcatcaccctcactttaactatgaaaa 33099719  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaat 323  Q
     |||||       || ||||||||||||||||||||    || |||||||||||||||||||| |||| ||||||||    
T  33099720 gacaataaaaa--tatcacaattgaaataaaactatggttcaaaaaatttcaaatcaactcatcaaatggtacgaat 33099794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 51055443 - 51055525
Alignment:
Q  157 gtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaact 239  Q
    ||||||||||| ||||||| | ||||||||||||||||  ||| ||||||  |||||| ||| |||||| ||||| |||||||    
T  51055443 gtgggcaacaactttagtggcattcctcataccctatgagcacctaagtgcacatacctgcatccattatccgcactttaact 51055525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 244
Target Start/End: Original strand, 12905597 - 12905686
Alignment:
Q  155 tcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    |||||||||| || ||||||| |||||| || || ||||||  || |||||||| |||| |||||||||||| |||| ||||||| ||||    
T  12905597 tcgtgggcaataactttagtgtccttccccaaactctatgggtacctaagtgtctatactcgcacccattactcgcactttaactatgaa 12905686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 26795387 - 26795319
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccataccc 215  Q
    ||||||| ||||||| ||||| || ||||||||| |||||||||||||| ||| ||||||  |||||||    
T  26795387 ccgtaccctcgtgggtaacaacttcagtgccctttctcataccctatgggcacctaagtgctcataccc 26795319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 219
Target Start/End: Original strand, 27346555 - 27346627
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcac 219  Q
    ||||||| ||| ||||||||| ||||||||| |||| |||| |||||||  | ||||||| ||||||||||||    
T  27346555 ccgtaccctcgagggcaacaactttagtgcctttccccatatcctatgggtaattaagtgcccatacccgcac 27346627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 33558902 - 33558838
Alignment:
Q  155 tcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcac 219  Q
    ||||||||||||| |||||||||||||| |||| |||||||  |  ||||||||| |||||||||    
T  33558902 tcgtgggcaacaactttagtgcccttccccatatcctatgggtatctaagtgtccgtacccgcac 33558838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 334
Target Start/End: Complemental strand, 6083561 - 6083490
Alignment:
Q  263 cacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
    |||| ||||||||||||||| | ||| ||    ||||||||| |||||||||||||||||||| ||||||||    
T  6083561 cacatttgaaataaaactatgatccaaaattaatcaaatcaagtcataaaatagtacgaatcgaagtattta 6083490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 194
Target Start/End: Original strand, 40563913 - 40563960
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatg 194  Q
    ||||| || |||||||||||| |||||||||||||| |||||||||||    
T  40563913 ccgtatctccgtgggcaacaactttagtgcccttccccataccctatg 40563960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 30964640 - 30964594
Alignment:
Q  190 ctatggacacttaagtgtccatacccgcacccattacccgcatttta 236  Q
    |||||||||||||||||| |||||| |||||||||| ||||| ||||    
T  30964640 ctatggacacttaagtgttcatacctgcacccattatccgcaattta 30964594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 30980452 - 30980406
Alignment:
Q  190 ctatggacacttaagtgtccatacccgcacccattacccgcatttta 236  Q
    |||||||||||||||||| |||||| |||||||||| ||||| ||||    
T  30980452 ctatggacacttaagtgttcatacctgcacccattatccgcaattta 30980406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 7940337 - 7940394
Alignment:
Q  179 ttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcatttta 236  Q
    |||| ||||||||||| | || |||||| ||||||||||| |||||||||||| ||||    
T  7940337 ttccccataccctatgaatacctaagtgcccatacccgcatccattacccgcacttta 7940394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 261 - 334
Target Start/End: Original strand, 27346655 - 27346727
Alignment:
Q  261 accacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
    |||||||||||||||||| ||| |   | |||| |||||||||||| |||||||||||  ||||||||||||||    
T  27346655 accacaattgaaataaaattatga-taaaaaaaattcaaatcaactaataaaatagtataaatcgtagtattta 27346727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 612 - 649
Target Start/End: Complemental strand, 42096463 - 42096426
Alignment:
Q  612 ccgtgtccatacccattcaaatttgcgggtaattaccc 649  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  42096463 ccgtgtccatatccattaaaatttgcgggtaattaccc 42096426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 7e-48; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 112 - 334
Target Start/End: Original strand, 18974644 - 18974865
Alignment:
Q  112 gtacccatcttcatacccgcgtttgtaaaaaatgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccat 211  Q
    |||||||||  |||||||||||||| |||||||  |||||||||||||||||||||||||||||  ||||| |||||||||||| |||||| ||| ||||    
T  18974644 gtacccatccccatacccgcgtttgcaaaaaatacccgtaccttcgtgggcaacaattttagtg-tcttccccataccctatgggcacttaggtgcccat 18974742  T
Q  212 acccgcacccattacccgcattttaactgtgaacaaacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataa 311  Q
    | |||||||||||| ||||||||||| | |||| | |||||         ||||||||||||||||||||| | ||| ||||||||||||||||||||||    
T  18974743 atccgcacccattatccgcattttaattatgaaaagacaataaaaaaaacccacaattgaaataaaactatgatccaaaaaatttcaaatcaactcataa 18974842  T
Q  312 aatagtacgaatcgtagtattta 334  Q
    |||| || ||||| |||||||||    
T  18974843 aataatatgaatcatagtattta 18974865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 112 - 335
Target Start/End: Complemental strand, 41935701 - 41935466
Alignment:
Q  112 gtacccatcttcatacccgcgtttgtaaaaaat------------gtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacac 199  Q
    |||||||||| ||||||||||||||||||||||            ||||||||| ||||||||||||| ||||||| ||||||||||||||||||| |||    
T  41935701 gtacccatctccatacccgcgtttgtaaaaaatatctgtacccgggtccgtaccctcgtgggcaacaactttagtgtccttcctcataccctatgggcac 41935602  T
Q  200 ttaagtgtccatacccgcacccattacccgcattttaactgtgaacaaacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaa 299  Q
     ||||||  |||||||||||||||||||| || ||||| | |||| | |||||        ||||||| ||||||| |||||||| ||| ||||||||||    
T  41935601 ctaagtgctcatacccgcacccattacccacagtttaattctgaaaagacaataaaaaagcaccacaactgaaatacaactataatccagaaaatttcaa 41935502  T
Q  300 atcaactcataaaatagtacgaatcgtagtatttaa 335  Q
    |||||||||||||||| || |||||||| |||||||    
T  41935501 atcaactcataaaataatatgaatcgtactatttaa 41935466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 155 - 334
Target Start/End: Complemental strand, 29546217 - 29546037
Alignment:
Q  155 tcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaacaaacaat-n 253  Q
    ||||||||||||| || | ||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||| | |||||      
T  29546217 tcgtgggcaacaacttcattgcccttccccataccctatgggcacctaagtgtccatacccgcacccattacccgcattttaactatgaaaagacaataa 29546118  T
Q  254 nnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
           ||||| |||||||||||||||| | ||| ||| |||||||||||||||||| ||| || |||||||||||||||    
T  29546117 aaaaaaaaccacgattgaaataaaactatgatccaaaaagtttcaaatcaactcataacataatatgaatcgtagtattta 29546037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 150 - 334
Target Start/End: Original strand, 2656776 - 2656959
Alignment:
Q  150 taccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaacaaac 249  Q
    |||| ||||||||||||| ||||||| |||||| ||||||||||||  |||||||||||||||||| ||| ||||||| ||| ||||||  | || | ||    
T  2656776 taccctcgtgggcaacaactttagtgtccttccccataccctatgggtacttaagtgtccatacccacacacattacctgcactttaaccatcaaaagac 2656875  T
Q  250 aatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
    |||        |||| ||||||||||||| ||| | ||| ||||||||||||||||| ||||||||||| |||||||||||||||    
T  2656876 aataaaaaac-accataattgaaataaaattatgatccaaaaaatttcaaatcaactaataaaatagtatgaatcgtagtattta 2656959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 147 - 239
Target Start/End: Original strand, 4481031 - 4481123
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaact 239  Q
    ||||||| ||||||||||||| |||||| ||||||| ||||||||||||  |||||||||||||||||||||||||||||||||| |||||||    
T  4481031 ccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacttaagtgtccatacccgcacccattacccgcactttaact 4481123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 147 - 334
Target Start/End: Original strand, 4289615 - 4289801
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| |||| ||||||||| |||||||||||| ||||||||||  ||||||| ||||||||||||||| |||  || |||| |    
T  4289615 ccgtaccctcgtgggcaacaactttaatgcccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcactttctctatgaaaa 4289714  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
     |||||       || |||||||||||||||||||| | ||| ||   || ||||||||| |||||||| ||||||| ||||||||||    
T  4289715 gacaat-aaaaaatatcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaataatacgaattgtagtattta 4289801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 35048598 - 35048687
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcatttta 236  Q
    ||||||| ||||||||||||| |||||||||||||| |||| ||||||| |||||||||| |||||||||||||||||||||||| ||||    
T  35048598 ccgtaccctcgtgggcaacaactttagtgcccttccccatatcctatgggcacttaagtgcccatacccgcacccattacccgcacttta 35048687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 392 - 489
Target Start/End: Original strand, 8754085 - 8754183
Alignment:
Q  392 tactttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaagttgtattaagatgttttag 489  Q
    |||||||||| |||||||||| ||||||||  ||||| |||||||| |||||||||||| ||||||||||||||||||||||| |||||| ||||||||    
T  8754085 tactttacatcaattatacgttaaaaagttacagttgcatgttaaagtcataataaattgttactaaagtttttattaagttgcattaagctgttttag 8754183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 147 - 244
Target Start/End: Original strand, 23231706 - 23231803
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    ||||||| ||||||||||||| | |||| ||||||| ||||||||||||  ||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  23231706 ccgtaccctcgtgggcaacaactgtagtccccttccccataccctatgggtacttaagtgcccatacccgcacccattacccgcactttaactatgaa 23231803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 147 - 239
Target Start/End: Complemental strand, 32422870 - 32422778
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaact 239  Q
    ||||||| ||||||||||||| |||||| ||||||| ||||||||||||  ||||||||  |||||||||||||||||||||||| |||||||    
T  32422870 ccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacttaagtacccatacccgcacccattacccgcactttaact 32422778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 155 - 336
Target Start/End: Complemental strand, 668092 - 667913
Alignment:
Q  155 tcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaacaaacaatnn 254  Q
    ||||||||||||| |||||||||||||| |||| |||||||  || |||||| |||||||||||||||||| ||||| ||||||| |||| | |||||      
T  668092 tcgtgggcaacaactttagtgcccttccccatatcctatgggtacctaagtgcccatacccgcacccattatccgcactttaactatgaaaagacaat-- 667995  T
Q  255 nnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtatttaat 336  Q
         || ||||||||||||||||||||   | | |   ||| |||| ||||||||||||| || |||||||||||||||||    
T  667994 aaaaatatcacaattgaaataaaactatggtctacatcttttaaaattaactcataaaataatatgaatcgtagtatttaat 667913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 155 - 228
Target Start/End: Original strand, 15161970 - 15162043
Alignment:
Q  155 tcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattaccc 228  Q
    ||||||||||||| ||||||||||||||  ||||||||||| |||||||||| |||||||||||||||||||||    
T  15161970 tcgtgggcaacaactttagtgcccttccctataccctatgggcacttaagtgcccatacccgcacccattaccc 15162043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 38620378 - 38620459
Alignment:
Q  158 tgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaact 239  Q
    |||||||||| |||||| ||||||| ||||||||||||  |||||||| ||||||||||||||||||||||||| |||||||    
T  38620378 tgggcaacaactttagtccccttccccataccctatgggtacttaagtatccatacccgcacccattacccgcactttaact 38620459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 147 - 239
Target Start/End: Original strand, 25424729 - 25424821
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaact 239  Q
    ||||||| ||||||||||||| |||||| ||||||| ||||||||||||  ||||| ||  |||||||||||||||||||||||| |||||||    
T  25424729 ccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacttaggtacccatacccgcacccattacccgcactttaact 25424821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 147 - 239
Target Start/End: Complemental strand, 33867675 - 33867583
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaact 239  Q
    ||||||| ||||||||||||| |||||| ||||||| ||||||||||||  ||||| ||  |||||||||||||||||||||||| |||||||    
T  33867675 ccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacttaggtacccatacccgcacccattacccgcactttaact 33867583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 618 - 746
Target Start/End: Original strand, 42970667 - 42970792
Alignment:
Q  618 ccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccatagcggatacttttttgcggatc 717  Q
    ||||||||||  |||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||| ||| ||||||||| || |||||||||  |     
T  42970667 ccatacccatataaatttgcgggtaattacccataccc-aagcctggacccatgaaagcagggttttaccctacccatagcgggta-ttttttgcgagtg 42970764  T
Q  718 cccattggggtctgggtacaattgtcatc 746  Q
    |||| | || ||||||| |||||||||||    
T  42970765 ccca-taggatctgggtccaattgtcatc 42970792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 148 - 244
Target Start/End: Complemental strand, 4592322 - 4592226
Alignment:
Q  148 cgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    |||||| |||| |||||||| |||||||||||||||| |||| |||||  || ||||||||||| | ||||||||||||||||| ||||||| ||||    
T  4592322 cgtaccctcgtcggcaacaactttagtgcccttcctcgtaccttatgggtacctaagtgtccatgctcgcacccattacccgcactttaactatgaa 4592226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 147 - 251
Target Start/End: Complemental strand, 31440765 - 31440661
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| |||||||||| || |||||| ||||||  |||||||||||   || |||||| |||||||||||||||||||||||| ||||||| |||| |    
T  31440765 ccgtaccctcgtgggcaataactttagtccccttctccataccctatgtgtacctaagtgcccatacccgcacccattacccgcactttaactatgaaaa 31440666  T
Q  247 aacaa 251  Q
    |||||    
T  31440665 aacaa 31440661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 606 - 753
Target Start/End: Original strand, 11789032 - 11789176
Alignment:
Q  606 ccatagccgtgtccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccatagcggatact 705  Q
    ||||| ||||| ||||||||||  ||||||||||||||||| |||||||| ||||  ||| ||||||||||   ||||||| ||| |||||||||||| |    
T  11789032 ccatacccgtgcccatacccatataaatttgcgggtaattatccataccc-aagcccggatccatgaaagcgaggttttaccctacccatagcggata-t 11789129  T
Q  706 tttttgcggatccccattggggtctgggtacaattgtcatccctattc 753  Q
    ||||||| | | |||| | |||||||||| |||||| |||||||||||    
T  11789130 tttttgcaggtgccca-tagggtctgggtccaattgccatccctattc 11789176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 144 - 239
Target Start/End: Complemental strand, 13142704 - 13142609
Alignment:
Q  144 tgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaact 239  Q
    |||||||||| || |||||||||| |||||| ||||||| |||||||||||   ||||||||  ||||||||||| |||||||||||| |||||||    
T  13142704 tgtccgtaccctcttgggcaacaactttagtccccttccccataccctatgagtacttaagtacccatacccgcatccattacccgcactttaact 13142609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 405 - 474
Target Start/End: Original strand, 2657021 - 2657091
Alignment:
Q  405 ttatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaagttgt 474  Q
    |||||||| ||||||||| ||||| |||||||| |||||||||||| ||||||||||||||||||||||||    
T  2657021 ttatacgtaaaaaagttgcagttgcatgttaaagtcataataaattgttactaaagtttttattaagttgt 2657091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 581 - 747
Target Start/End: Original strand, 2657195 - 2657357
Alignment:
Q  581 ttgcgggactgaataggtacagtatccatagccgtgtccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtg 680  Q
    |||||||||||| ||| |||| | |||||| |||||||||||||||||||| ||||| |||||||| |||| ||| |||   |||||||||||||  | |    
T  2657195 ttgcgggactgagtag-tacaatgtccatacccgtgtccatacccattcaattttgcaggtaattatccatgccc-aagtccggacccatgaaagtgggg 2657292  T
Q  681 ttttacactatccatagcggatacttttttgcggatccccattggggtctgggtacaattgtcatcc 747  Q
    |||||| |||||||||| ||||| |||||||||| | |||| | || ||||||| |||||| |||||    
T  2657293 ttttaccctatccatagtggata-ttttttgcgggtgccca-taggatctgggtccaattgccatcc 2657357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 155 - 334
Target Start/End: Original strand, 15234293 - 15234472
Alignment:
Q  155 tcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaacaaacaatnn 254  Q
    ||||||||||||| |||||| |||| ||||||||||||||| |||  |||||  ||| |||||||||| |||||||| |||| || |||| | | |||      
T  15234293 tcgtgggcaacaactttagtaccctacctcataccctatgggcacaaaagtgctcattcccgcacccaatacccgcactttatctatgaaaagaaaataa 15234392  T
Q  255 nnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
          | ||||||||||| |||||||| | ||| ||   ||||||||||||| |||||| |||| ||||||||||||||    
T  15234393 aaaatcatcacaattgaaacaaaactatgatccaaaattattcaaatcaactcttaaaatcgtacaaatcgtagtattta 15234472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 147 - 244
Target Start/End: Original strand, 3329166 - 3329263
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    ||||||| ||||||||||||| |||||| || |||| ||||| ||||||  || |||||||| ||||||||||||||||||| || ||||||| ||||    
T  3329166 ccgtaccctcgtgggcaacaactttagtccctttccccatactctatgggtacctaagtgtctatacccgcacccattacccacactttaactatgaa 3329263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 155 - 228
Target Start/End: Complemental strand, 8027573 - 8027500
Alignment:
Q  155 tcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattaccc 228  Q
    |||||| |||||| |||||||||||| | |||||||||||| |||||||||  |||||||||||||||||||||    
T  8027573 tcgtggacaacaactttagtgccctttcccataccctatgggcacttaagtacccatacccgcacccattaccc 8027500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 405 - 469
Target Start/End: Original strand, 11788836 - 11788901
Alignment:
Q  405 ttatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaa 469  Q
    |||||||| ||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||    
T  11788836 ttatacgttaaaaagttgtagttgcatgttaaaatcataataaattgttactaaagtttttattaa 11788901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 150 - 230
Target Start/End: Complemental strand, 16711469 - 16711389
Alignment:
Q  150 taccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgc 230  Q
    |||| |||||| ||||||||||| || ||||||||||||||||||  |||||||||| ||||||||| |||||||| ||||    
T  16711469 taccctcgtggacaacaattttaatgtccttcctcataccctatgagcacttaagtgcccatacccgtacccattatccgc 16711389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 123 - 251
Target Start/End: Original strand, 30241380 - 30241508
Alignment:
Q  123 catacccgcgtttgtaaaaaatgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcaccca 222  Q
    ||||||||| ||| ||||||||  ||| | | |||| |||||||| ||||||  |||||  ||||||||||||  || |||||| |||||| ||||||||    
T  30241380 catacccgcatttataaaaaatacccggatcctcgtcggcaacaactttagtctccttctccataccctatgggtacctaagtgcccatactcgcaccca 30241479  T
Q  223 ttacccgcattttaactgtgaacaaacaa 251  Q
    ||||||||| ||||||| |||| ||||||    
T  30241480 ttacccgcactttaactatgaaaaaacaa 30241508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 218
Target Start/End: Original strand, 11788599 - 11788669
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgca 218  Q
    ||||||| |||||||||||||||||||||||||||| || ||||||||| | |||||||| |||||||||||    
T  11788599 ccgtaccctcgtgggcaacaattttagtgcccttcc-cagaccctatgggcccttaagtgcccatacccgca 11788669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 190
Target Start/End: Complemental strand, 40507760 - 40507693
Alignment:
Q  123 catacccgcgtttgtaaaaaatgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccc 190  Q
    ||||||||||||||||||||||||  ||||||||||||| ||||| |||| ||||||| |||||||||    
T  40507760 catacccgcgtttgtaaaaaatgtttgtaccttcgtgggtaacaactttaatgccctttctcataccc 40507693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 597 - 686
Target Start/End: Original strand, 35049033 - 35049121
Alignment:
Q  597 gtacagtatccatagccgtgtccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttac 686  Q
    |||||||  ||||| ||||| ||||||||||  |||||||||||||||||||||||||| ||||  |||||||||||||| | |||||||    
T  35049033 gtacagtgcccatatccgtgcccatacccatataaatttgcgggtaattacccataccc-aagcccggacccatgaaagcggggttttac 35049121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 405 - 469
Target Start/End: Original strand, 42969249 - 42969314
Alignment:
Q  405 ttatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaa 469  Q
    |||||| | ||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||    
T  42969249 ttatacattaaaaagttgtagttgcatgttaaaatcataataaattgttactaaagtttttattaa 42969314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 244
Target Start/End: Complemental strand, 17154277 - 17154179
Alignment:
Q  145 gtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    ||||||||| |||| |||||||| ||||||| |||||| ||||||||||||   ||||| || ||||||||||||| |||| | ||||||||||| ||||    
T  17154277 gtccgtaccctcgtaggcaacaactttagtgtccttccccataccctatggtaccttaa-tgcccatacccgcaccaattatctgcattttaactatgaa 17154179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 396 - 466
Target Start/End: Original strand, 35048837 - 35048908
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttat 466  Q
    |||||| | ||||| || ||||||||||||||| |||||||| |||||||||||| ||||||||||||||||    
T  35048837 ttacatcagttatatgttaaaaagttgtagttgcatgttaaaatcataataaattgttactaaagtttttat 35048908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 190
Target Start/End: Complemental strand, 40475413 - 40475346
Alignment:
Q  123 catacccgcgtttgtaaaaaatgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccc 190  Q
    ||||||||||||||||||||||||| ||||||| ||||| ||||| ||||||||| || | |||||||    
T  40475413 catacccgcgtttgtaaaaaatgtctgtacctttgtgggtaacaactttagtgccatttcccataccc 40475346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 15162169 - 15162243
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgtt-aaatcataataaattattactaaagtttttattaa 469  Q
    |||||| | |||||||| ||||||||||||||| ||||| |||||||||||||||  ||||||| ||||||||||    
T  15162169 ttacatcagttatacgttaaaaagttgtagttgcatgttaaaatcataataaattgatactaaaatttttattaa 15162243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 244
Target Start/End: Original strand, 29155287 - 29155388
Alignment:
Q  143 atgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtg 242  Q
    ||||||| ||||| |||| |||||| |||| | | ||||| ||||||||||||  ||  ||||| || ||||||||||||||||||||| ||||||| ||    
T  29155287 atgtccgcacctttgtggacaacaactttaatactcttccccataccctatgggtacccaagtgcccgtacccgcacccattacccgcactttaactatg 29155386  T
Q  243 aa 244  Q
    ||    
T  29155387 aa 29155388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 244
Target Start/End: Original strand, 9205150 - 9205250
Alignment:
Q  144 tgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtga 243  Q
    |||||||| | ||||||| || || ||| || ||||||| |||||||||||   || |||||| ||||||||||| |||||| ||||||||||||| |||    
T  9205150 tgtccgtatcctcgtgggtaataactttggtccccttccccataccctatgagtacctaagtgcccatacccgcatccattatccgcattttaactatga 9205249  T
Q  244 a 244  Q
    |    
T  9205250 a 9205250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 630 - 714
Target Start/End: Complemental strand, 12345212 - 12345130
Alignment:
Q  630 aaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccatagcggatacttttttgcgg 714  Q
    |||||| ||||||||||||||||||| ||||  |||||||||||||| | ||||||| ||| ||||||||| || ||||||||||    
T  12345212 aaatttacgggtaattacccataccc-aagcccggacccatgaaagcggggttttaccctacccatagcgggta-ttttttgcgg 12345130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 618 - 750
Target Start/End: Original strand, 15162374 - 15162503
Alignment:
Q  618 ccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccatagcggatacttttttgcggatc 717  Q
    ||||||||||  |||||||||||||||||||||||||| ||||  ||| |||||||||  |  |||||| ||| ||||||||| || |||||||||| |     
T  15162374 ccatacccatataaatttgcgggtaattacccataccc-aagcccggatccatgaaagtgggattttaccctacccatagcgggta-ttttttgcgggtg 15162471  T
Q  718 cccattggggtctgggtacaattgtcatcccta 750  Q
     ||| | || ||||||| |||||||||||||||    
T  15162472 tcca-taggatctgggtccaattgtcatcccta 15162503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 219
Target Start/End: Complemental strand, 44070534 - 44070462
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcac 219  Q
    ||||||| ||||||||||||| |||||| ||||| | ||||||||||||  || |||||| ||||||||||||    
T  44070534 ccgtaccctcgtgggcaacaactttagtcccctttcccataccctatgggtacctaagtgcccatacccgcac 44070462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 12345433 - 12345359
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaa 469  Q
    |||||| | |||||||| ||||||||||||||| ||| |||| |||||||||||| |||||||  ||||||||||    
T  12345433 ttacatcagttatacgttaaaaagttgtagttgcatgctaaaatcataataaattgttactaacatttttattaa 12345359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 193
Target Start/End: Original strand, 42969007 - 42969053
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctat 193  Q
    ||||||| ||||||||||||| |||||||||||||| ||||||||||    
T  42969007 ccgtaccctcgtgggcaacaactttagtgcccttccccataccctat 42969053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 8753932 - 8753989
Alignment:
Q  261 accacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagta 318  Q
    |||||||||||||||||| ||| | ||  ||||||||||||||||| |||||||||||    
T  8753932 accacaattgaaataaaattatgatccgcaaaatttcaaatcaactaataaaatagta 8753989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 294 - 335
Target Start/End: Original strand, 12757886 - 12757927
Alignment:
Q  294 tttcaaatcaactcataaaatagtacgaatcgtagtatttaa 335  Q
    |||||||||| |||||||||||||| ||||||||||||||||    
T  12757886 tttcaaatcagctcataaaatagtaagaatcgtagtatttaa 12757927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 612 - 648
Target Start/End: Original strand, 4290027 - 4290063
Alignment:
Q  612 ccgtgtccatacccattcaaatttgcgggtaattacc 648  Q
    ||||||||||||||||| |||||||||||||||||||    
T  4290027 ccgtgtccatacccattaaaatttgcgggtaattacc 4290063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 439 - 470
Target Start/End: Complemental strand, 8027353 - 8027322
Alignment:
Q  439 cataataaattattactaaagtttttattaag 470  Q
    ||||||||||||||||||||||||||||||||    
T  8027353 cataataaattattactaaagtttttattaag 8027322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 299 - 334
Target Start/End: Complemental strand, 35005442 - 35005407
Alignment:
Q  299 aatcaactcataaaatagtacgaatcgtagtattta 334  Q
    |||||||||||||||||||||| |||||||||||||    
T  35005442 aatcaactcataaaatagtacggatcgtagtattta 35005407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 655
Target Start/End: Original strand, 8754293 - 8754351
Alignment:
Q  597 gtacagtatccatagccgtgtccatacccattcaaatttgcgggtaattacccataccc 655  Q
    |||||||  ||||| || || |||||||||||||||||| |||||||||| ||||||||    
T  8754293 gtacagtgcccatacccatgcccatacccattcaaatttacgggtaattatccataccc 8754351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 29221310 - 29221229
Alignment:
Q  156 cgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaa 237  Q
    ||||||||||||||||| ||||| ||| ||| |||||||| ||  ||| || || ||| ||| ||||||||||||| |||||    
T  29221310 cgtgggcaacaattttactgcccgtccccatgccctatgggcatctaaatgcccgtactcgcgcccattacccgcactttaa 29221229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 29334609 - 29334528
Alignment:
Q  156 cgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaa 237  Q
    ||||||||||||||||| ||||| ||| ||| |||||||| ||  ||| || || ||| ||| ||||||||||||| |||||    
T  29334609 cgtgggcaacaattttactgcccgtccccatgccctatgggcatctaaatgcccgtactcgcgcccattacccgcactttaa 29334528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 95; Significance: 5e-46; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 147 - 334
Target Start/End: Complemental strand, 26255 - 26068
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||| ||| ||||||  |||| |||||| ||||||||||||||||||| |||| |    
T  26255 ccgtaccctcgtgggcaacaactttagtgcccttcctcataccctatggtcacctaagtgctcataaccgcactcattacccgcattttaactatgaaaa 26156  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
     |||||         ||||||||||||||||||||| | ||| |||||||||||||||||||||||||| || |||||||||||||||    
T  26155 gacaataaaaaaaagccacaattgaaataaaactatgatccaaaaaatttcaaatcaactcataaaataatatgaatcgtagtattta 26068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 7e-45; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 145 - 334
Target Start/End: Complemental strand, 38470050 - 38469862
Alignment:
Q  145 gtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    ||||||| | |||||||||||||||||||| ||||||| ||||||| |||| |||||||||| |||||||||||||||||||||||| ||||||||| ||    
T  38470050 gtccgtatcctcgtgggcaacaattttagtacccttccccatacccaatgggcacttaagtgcccatacccgcacccattacccgcactttaactgtaaa 38469951  T
Q  245 caaacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
     | |||||        ||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||| ||| ||| ||||||    
T  38469950 aatacaataaaaaac-accacaattaaaataaaactataatccataaaatttcaaatcaacttataaaatagtacaaatagtaatattta 38469862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 385 - 497
Target Start/End: Complemental strand, 38469815 - 38469703
Alignment:
Q  385 tagacagtactttacataaattatacgtcaaaaagttgtagttgtatgttaaatcataataaattattactaaagtttttattaagttgtattaagatgt 484  Q
    |||| |||||||||||||| |||||||| ||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  38469815 tagatagtactttacataagttatacgttaaaaagttgcagttgcatgttaaatcataataaattgttactaaagtttttattaagttgtattaagatgt 38469716  T
Q  485 tttagcgttaggt 497  Q
    |||||||||||||    
T  38469715 tttagcgttaggt 38469703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 147 - 336
Target Start/End: Complemental strand, 48558813 - 48558625
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||| ||||| |||||||||||| ||||||  |||| |    
T  48558813 ccgtaccctcgtgggcaacaactttagtgcccttccccataccctatggccacttaagtgtccatatccgcatccattacccgcactttaaccatgaaaa 48558714  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtatttaat 336  Q
     |||||        | |||| |||||||||||| || | ||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  48558713 gacaataaaaaac-agcacagttgaaataaaaccatgatccaaaaaatttcaaatcaactcataaaatagtatgaatcgtagtatttaat 48558625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 147 - 334
Target Start/End: Complemental strand, 1876172 - 1875984
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| |||||||||||||| |||||||||||| ||| |||||| |||||||||||||||||||||||||||||||| |||| |    
T  1876172 ccgtaccatcgtgggcaacaactttagtgcccttccccataccctatgggcacctaagtgcccatacccgcacccattacccgcattttaactatgaaaa 1876073  T
Q  247 aacaatnnnnnnnta-ccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
     |||||        | || |||||||||||||| ||| | ||| |||||||||||||||||||||||||| ||  ||||||||||||||    
T  1876072 gacaataaaaaaaaacccgcaattgaaataaaattatgatccaaaaaatttcaaatcaactcataaaataatatcaatcgtagtattta 1875984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 112 - 327
Target Start/End: Complemental strand, 5924234 - 5924017
Alignment:
Q  112 gtacccatcttcatacccgcgtttgtaaaaaatgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccat 211  Q
    |||||||||  |||| |||||||||||||||||  ||||||| ||||||| ||||| |||||||||||||| |||||||| ||| ||| |||||||||||    
T  5924234 gtacccatccccatatccgcgtttgtaaaaaatacccgtaccctcgtgggtaacaactttagtgcccttccccataccctgtgggcacctaagtgtccat 5924135  T
Q  212 acccgcacccattacccgcattttaactgtgaacaaacaatnnnnnnntaccacaattgaaataaaactataaccca--taaaatttcaaatcaactcat 309  Q
    ||| |||||||||||||||| ||||||| |||| | |||||        | |||||||||||||||||||||| |||  |    ||| ||||||||||||    
T  5924134 acctgcacccattacccgcactttaactatgaaaagacaataaaaaagcatcacaattgaaataaaactataatccaattttttttttaaatcaactcat 5924035  T
Q  310 aaaatagtacgaatcgta 327  Q
    ||||||||||||||||||    
T  5924034 aaaatagtacgaatcgta 5924017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 84 - 334
Target Start/End: Original strand, 30391466 - 30391719
Alignment:
Q  84 ggatggcaatgtgtatccaatgggcagggtacccatcttcatacccgcgtttgtaaaaaatgtc------cgtaccttcgtgggcaacaattttagtgcc 177  Q
    ||||||||||| ||||||||||||||||||||| ||| |||||||| | ||||||||||||||       |||| | ||||||||||||| |||||||||    
T  30391466 ggatggcaatgggtatccaatgggcagggtacc-atcctcatacccacatttgtaaaaaatgtttgtgcacgtatcctcgtgggcaacaactttagtgcc 30391564  T
Q  178 cttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaacaaacaatnnnnnnntaccacaattgaaataaa 277  Q
    ||| | | | |||||||| |||||||||| ||||||||||| |||||| ||||| ||||||  |||| | |||||        | |||||||||||||||    
T  30391565 ctttccctt-ccctatgggcacttaagtgcccatacccgcatccattatccgcactttaaccatgaaaagacaataaaaaac-agcacaattgaaataaa 30391662  T
Q  278 actataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
    || || | ||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  30391663 accatgatccaaaaaatttcaaatcaactcataaaatagtatgaatcgtagtattta 30391719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 138 - 335
Target Start/End: Original strand, 45112170 - 45112367
Alignment:
Q  138 aaaaaatgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaa 237  Q
    ||||||| |||||||| |||||||||| || |||||||||||||  |||||||||||| ||| ||||||  ||||||||||||||||||||| | |||||    
T  45112170 aaaaaatatccgtaccctcgtgggcaataactttagtgcccttctccataccctatgggcacctaagtgctcatacccgcacccattacccgtagtttaa 45112269  T
Q  238 ctgtgaacaaacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtatttaa 335  Q
    || |||| | |||||        ||||||| ||||||| || ||| | ||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  45112270 ctctgaaaagacaatgaaaaagcaccacaactgaaatacaattatgatccataaaatttcaaatcaactcataaaatagtatgaatggtagtatttaa 45112367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 124 - 334
Target Start/End: Original strand, 2959897 - 2960106
Alignment:
Q  124 atacccgcgtttgtaaaaaatgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccat 223  Q
    |||||||  ||||||||||||||||||| | |||||||||| || |||||||||||||| ||| || ||||| ||| ||||||||||||||| || | ||    
T  2959897 atacccgtatttgtaaaaaatgtccgtatcctcgtgggcaataactttagtgcccttccccattccgtatgggcacctaagtgtccatacccacatctat 2959996  T
Q  224 tacccgcattttaactgtgaacaaacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaat 323  Q
    |||||||| ||||||| ||||   |||||        | |||||||||||||||| ||| | ||| ||||||||||||||||||||||||||||||||||    
T  2959997 tacccgcactttaactatgaaatgacaataaaaaac-atcacaattgaaataaaattatgatccaaaaaatttcaaatcaactcataaaatagtacgaat 2960095  T
Q  324 cgtagtattta 334  Q
     ||||||||||    
T  2960096 tgtagtattta 2960106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 155 - 334
Target Start/End: Complemental strand, 40342437 - 40342259
Alignment:
Q  155 tcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaacaaacaatnn 254  Q
    ||||||||||||| |||||||||||||| |||||||||| | ||| |||||| |||||||| || |||||||||||||||||||| |||| | |||||      
T  40342437 tcgtgggcaacaactttagtgcccttccccataccctataggcacctaagtgcccatacccccatccattacccgcattttaactatgaaaagacaataa 40342338  T
Q  255 nnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
           ||||||||||||||||||||| | ||| ||||||||||||||||| |||||||| || |||||||||||||||    
T  40342337 aaaaa-cccacaattgaaataaaactatgatccaaaaaatttcaaatcaactaataaaataatatgaatcgtagtattta 40342259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 123 - 335
Target Start/End: Original strand, 36072572 - 36072778
Alignment:
Q  123 catacccgcgtttgtaaaaaatgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcaccca 222  Q
    ||||||||||||||||||||||      ||| ||||||||||||| |||||||||||||| |||||||||||| ||| |||||| ||||||||||||| |    
T  36072572 catacccgcgtttgtaaaaaat------accctcgtgggcaacaactttagtgcccttccccataccctatgggcacctaagtgcccatacccgcaccaa 36072665  T
Q  223 ttacccgcattttaactgtgaacaaacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaa 322  Q
    ||||||||| ||||||| |||| | |||||        | ||||| | ||||| || ||| | ||  ||||||||| ||||||||||||||| ||| |||    
T  36072666 ttacccgcaatttaactctgaaaagacaataaaaaagcatcacaactaaaatacaattatgatcctgaaaatttcacatcaactcataaaatggtatgaa 36072765  T
Q  323 tcgtagtatttaa 335  Q
    | |||||||||||    
T  36072766 tagtagtatttaa 36072778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 147 - 251
Target Start/End: Original strand, 27398565 - 27398669
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| |||||| ||||||| ||||||||||||| ||||||||| ||||||||||||||||||||| || ||||||| |||| |    
T  27398565 ccgtaccctcgtgggcaacaactttagtccccttccccataccctatggatacttaagtgcccatacccgcacccattacccacactttaactatgaaaa 27398664  T
Q  247 aacaa 251  Q
    |||||    
T  27398665 aacaa 27398669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 147 - 334
Target Start/End: Complemental strand, 40789660 - 40789474
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| |||||| |||||| |||||||||||| | |||||||||||| |||||||||| |||||||||||| ||||||||||| |||  || |||| |    
T  40789660 ccgtaccctcgtggacaacaactttagtgccctttcccataccctatgggcacttaagtgcccatacccgcactcattacccgcactttctctatgaaaa 40789561  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
    ||||||        | |||||||||||||||||||| | ||| ||   || ||||||||| |||||||||||| ||||||| ||||||    
T  40789560 aacaataaaaaac-atcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaatagtacaaatcgtaatattta 40789474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 147 - 334
Target Start/End: Original strand, 44300698 - 44300884
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| |||||||||||||| |||| | ||||| |||||||||| ||||||| |||||| ||||||||| |||  || |||| |    
T  44300698 ccgtaccctcgtgggcaacaactttagtgcccttccccatatcttatgggcacttaagtgcccatacctgcacccgttacccgcactttctctatgaaaa 44300797  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
     |||||        | |||||||||||||||||||| | ||| ||   || ||||||||| |||||||||||||||||||||||||||    
T  44300798 gacaataaaaaac-atcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaatagtacgaatcgtagtattta 44300884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 148 - 334
Target Start/End: Complemental strand, 28067399 - 28067214
Alignment:
Q  148 cgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaacaa 247  Q
    |||||| |||||| |||||| |||| || | |||||||||||||||||  ||||||||| ||||||| |||||||||||| ||| ||||||  |||| |     
T  28067399 cgtaccctcgtggacaacaactttaatgtctttcctcataccctatgggtacttaagtgcccatacctgcacccattacctgcactttaaccatgaaaag 28067300  T
Q  248 acaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
    |||||        |||||||||||||||||| ||| | ||| ||||||||||||||||| |||||||||||  ||| ||||||||||    
T  28067299 acaataaaaaac-accacaattgaaataaaattatgatccaaaaaatttcaaatcaactaataaaatagtataaattgtagtattta 28067214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 34152489 - 34152405
Alignment:
Q  144 tgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattaccc 228  Q
    |||| ||||| |||||||||| || |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  34152489 tgtctgtaccctcgtgggcaataactttagtgcccttccccataccctatggacacttaagtgcccatacccgcacccattaccc 34152405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 34174635 - 34174719
Alignment:
Q  144 tgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattaccc 228  Q
    |||| ||||| |||||||||| || |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  34174635 tgtctgtaccctcgtgggcaataactttagtgcccttccccataccctatggacacttaagtgcccatacccgcacccattaccc 34174719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 144 - 251
Target Start/End: Complemental strand, 10066391 - 10066284
Alignment:
Q  144 tgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtga 243  Q
    |||||||||| ||||||||||||| |||||| ||||||| |||||||||| |  || |||||| |||||||||||||||||||||||| ||||||| |||    
T  10066391 tgtccgtaccctcgtgggcaacaactttagtccccttccccataccctataggtacctaagtgcccatacccgcacccattacccgcactttaactatga 10066292  T
Q  244 acaaacaa 251  Q
    | ||||||    
T  10066291 aaaaacaa 10066284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 147 - 334
Target Start/End: Complemental strand, 17172348 - 17172162
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| |||| ||||||||| |||||||||||| ||||||||||  ||||||| ||||||||||||||| |||  || |||| |    
T  17172348 ccgtaccctcgtgggcaacaactttaatgcccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcactttctctatgaaaa 17172249  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
     |||||        | |||||||||||||||||||| | ||| ||   || ||||||||| |||||||| ||||||| ||||||||||    
T  17172248 gacaataaaaaac-atcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaataatacgaattgtagtattta 17172162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 147 - 237
Target Start/End: Complemental strand, 36074253 - 36074163
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaa 237  Q
    ||||||||||||||| ||||| |||||||||||||| |||||||||||| ||| |||||| ||||||||| |||||||||||||| |||||    
T  36074253 ccgtaccttcgtgggtaacaactttagtgcccttccccataccctatgggcacctaagtgcccatacccgtacccattacccgcactttaa 36074163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 147 - 239
Target Start/End: Original strand, 16567552 - 16567644
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaact 239  Q
    ||||||| ||||||||||||| |||||| ||||||| ||||||||||||  ||||||||  |||||||||||||||||||||||| |||||||    
T  16567552 ccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacttaagtacccatacccgcacccattacccgcactttaact 16567644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 147 - 239
Target Start/End: Complemental strand, 16598110 - 16598018
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaact 239  Q
    ||||||| ||||||||||||| |||||| ||||||| ||||||||||||  ||||||||  |||||||||||||||||||||||| |||||||    
T  16598110 ccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacttaagtacccatacccgcacccattacccgcactttaact 16598018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 147 - 239
Target Start/End: Original strand, 46181198 - 46181290
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaact 239  Q
    ||||||| ||||||||||||| |||||| ||||||| ||||||||||||  ||||||||  |||||||||||||||||||||||| |||||||    
T  46181198 ccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacttaagtacccatacccgcacccattacccgcactttaact 46181290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 395 - 496
Target Start/End: Complemental strand, 28067160 - 28067058
Alignment:
Q  395 tttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaagttgtattaagatgttttagcgtt 493  Q
    ||||||| |||||||||| ||||||||| ||||  |||||||| |||||||||||| |||||||||| |||||||||||| |||||| |||||||| |||    
T  28067160 tttacatcaattatacgttaaaaagttgcagttacatgttaaagtcataataaattgttactaaagtctttattaagttgcattaagctgttttagggtt 28067061  T
Q  494 agg 496  Q
    |||    
T  28067060 agg 28067058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 26299138 - 26299227
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcatttta 236  Q
    ||||||| |||||| |||||| ||| |||||||||| |||||||||||| |||||||||||||||||||||||| |||| ||||| ||||    
T  26299138 ccgtaccctcgtggacaacaactttggtgcccttccccataccctatgggcacttaagtgtccatacccgcaccaattatccgcacttta 26299227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 123 - 244
Target Start/End: Complemental strand, 43702567 - 43702446
Alignment:
Q  123 catacccgcgtttgtaaaaaatgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcaccca 222  Q
    ||||||| | |||||||||| | | |||||| ||||||| ||||| |||||||| ||||| ||||||||||||  || |||||| ||||||||||| |||    
T  43702567 catacccacatttgtaaaaattattcgtaccctcgtgggtaacaactttagtgctcttccccataccctatgggtacctaagtgcccatacccgcatcca 43702468  T
Q  223 ttacccgcattttaactgtgaa 244  Q
    ||||||||| ||||||| ||||    
T  43702467 ttacccgcactttaactatgaa 43702446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 147 - 251
Target Start/End: Original strand, 19805023 - 19805127
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||| ||||| |||||| ||||||| ||||||||||||  || ||||||  ||||||||||||||||||||||| ||||||| |||| |    
T  19805023 ccgtaccctcgtgggtaacaactttagtccccttccccataccctatgggtacctaagtgctcatacccgcacccattacccgcactttaactatgaaaa 19805122  T
Q  247 aacaa 251  Q
    |||||    
T  19805123 aacaa 19805127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 144 - 252
Target Start/End: Original strand, 43224300 - 43224408
Alignment:
Q  144 tgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtga 243  Q
    |||| ||||| |||||| |||||| |||||||||||||| ||||||||||||  |  |||||| ||||||| |||||||||||||||| ||||||| |||    
T  43224300 tgtctgtaccctcgtggacaacaactttagtgcccttccccataccctatgggtatctaagtgcccatacctgcacccattacccgcactttaactatga 43224399  T
Q  244 acaaacaat 252  Q
    | |||||||    
T  43224400 aaaaacaat 43224408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 396 - 474
Target Start/End: Original strand, 26299607 - 26299686
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaagttgt 474  Q
    |||||| | |||||||| ||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||    
T  26299607 ttacatcagttatacgttaaaaagttgtagttgcatgttaaaatcataataaattgttactaaagtttttattaagttgt 26299686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 33978810 - 33978899
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcatttta 236  Q
    ||||||| ||||||||||||  |||||||||||||| |||||| ||||| ||| |||||| |||||||||||||||||| ||||| ||||    
T  33978810 ccgtaccctcgtgggcaacacctttagtgcccttccccataccgtatgggcacataagtgcccatacccgcacccattatccgcacttta 33978899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 31454891 - 31454987
Alignment:
Q  155 tcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaacaaacaa 251  Q
    ||||||||||||| ||||||  |||| | ||||||| ||||  |||||||||||||||||| ||||||||||||||| ||||||| |||| ||||||    
T  31454891 tcgtgggcaacaactttagtctcctttcccatacccaatgggtacttaagtgtccatacccacacccattacccgcactttaactatgaaaaaacaa 31454987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 9355291 - 9355220
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgca 218  Q
    ||||||| ||||||||||||| ||||||| ||||||||||||||||||| ||||||||||  ||||||||||    
T  9355291 ccgtaccctcgtgggcaacaactttagtgtccttcctcataccctatgggcacttaagtgctcatacccgca 9355220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 396 - 470
Target Start/End: Complemental strand, 12499495 - 12499420
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaag 470  Q
    |||||| | |||||||| ||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||    
T  12499495 ttacatcagttatacgttaaaaagttgtagttgcatgttaaaatcataataaattgttactaaagtttttattaag 12499420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 620 - 751
Target Start/End: Complemental strand, 48558352 - 48558225
Alignment:
Q  620 atacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccatagcggatacttttttgcggatccc 719  Q
    ||||||||| |||||||||||||||||||||||||| | ||  | ||||| |||||| | ||||||| |||||||||||||||| |||||||||| | ||    
T  48558352 atacccatttaaatttgcgggtaattacccataccc-atgcccgtacccaagaaagcggggttttac-ctatccatagcggata-ttttttgcgggtgcc 48558256  T
Q  720 cattggggtctgggtacaattgtcatccctat 751  Q
    |||| | |||||||| |||||| |||||||||    
T  48558255 catt-gagtctgggtccaattgccatccctat 48558225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 396 - 468
Target Start/End: Original strand, 9223857 - 9223930
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgtt-aaatcataataaattattactaaagtttttatta 468  Q
    |||||| |||||||||| ||||||||||||||| ||||| ||||||||||||||  ||||||||||||||||||    
T  9223857 ttacatcaattatacgttaaaaagttgtagttgcatgttaaaatcataataaatcgttactaaagtttttatta 9223930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 147 - 219
Target Start/End: Original strand, 9223627 - 9223699
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcac 219  Q
    ||||||| ||||||||||||| ||||||  | |||| |||||||||||| |||||||||||||||||||||||    
T  9223627 ccgtaccctcgtgggcaacaactttagtatcattccccataccctatgggcacttaagtgtccatacccgcac 9223699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 324
Target Start/End: Original strand, 11244022 - 11244186
Alignment:
Q  160 ggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaacaaacaatnnnnnnn 259  Q
    |||||||| |||||||||||||| |||| |||||||  || |||||  |||||||||||||||||| |  |||||||||| |||| | |||||           
T  11244022 ggcaacaactttagtgcccttccccatatcctatgggtacctaagtacccatacccgcacccattatcaacattttaactatgaaaagacaat-aaaata 11244120  T
Q  260 taccacaattg-aaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatc 324  Q
    || |||||||| ||||||||||||   ||  ||| ||||||||||||||||||||||||| |||||    
T  11244121 tatcacaattgaaaataaaactatggtcccaaaattttcaaatcaactcataaaatagtaagaatc 11244186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 597 - 747
Target Start/End: Original strand, 9224053 - 9224200
Alignment:
Q  597 gtacagtatccatagccgtgtccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccata 696  Q
    |||||||  ||||| ||||| ||||||||||  ||||||||||||||||| |||||||| ||||  | |||||| ||||| | ||||||| ||| |||||    
T  9224053 gtacagtgcccatatccgtgcccatacccatataaatttgcgggtaattatccataccc-aagcccgaacccataaaagcggggttttaccctacccata 9224151  T
Q  697 gcggatacttttttgcggatccccattggggtctgggtacaattgtcatcc 747  Q
    ||||||| |||||||| | | ||| || |||||||||| |||||| |||||    
T  9224152 gcggata-ttttttgcaggtgccc-ttagggtctgggtccaattgccatcc 9224200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 261 - 335
Target Start/End: Complemental strand, 40856030 - 40855956
Alignment:
Q  261 accacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtatttaa 335  Q
    ||||||| ||||||| | |||| | ||| ||||||||||||||||||||||||||||| |||| |||||||||||    
T  40856030 accacaactgaaatacagctattatccagaaaatttcaaatcaactcataaaatagtatgaatggtagtatttaa 40855956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 597 - 750
Target Start/End: Original strand, 33979245 - 33979395
Alignment:
Q  597 gtacagtatccatagccgtgtccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccata 696  Q
    ||||||| |||||| |||||  |||||||||  |||||||||||||||||||||||||| ||||  ||| ||||||||||   ||||||| ||| ||| |    
T  33979245 gtacagtgtccatacccgtgcacatacccatataaatttgcgggtaattacccataccc-aagcccggatccatgaaagcgtggttttaccctacccaaa 33979343  T
Q  697 gcggatacttttttgcggatccccattggggtctgggtacaattgtcatcccta 750  Q
    |||| || |||||||| | | |||| | |||||||||| |||||| ||||||||    
T  33979344 gcgggta-ttttttgcaggtgccca-tagggtctgggtccaattgccatcccta 33979395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 396 - 464
Target Start/End: Complemental strand, 34152281 - 34152212
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagttttt 464  Q
    |||||| | |||||||| ||||||||||||||| |||||||| |||||||||||| ||||||||||||||    
T  34152281 ttacatcagttatacgttaaaaagttgtagttgcatgttaaaatcataataaattgttactaaagttttt 34152212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 396 - 464
Target Start/End: Original strand, 34174843 - 34174912
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgtt-aaatcataataaattattactaaagttttt 464  Q
    |||||| | |||||||| ||||||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  34174843 ttacatcagttatacgttaaaaagttgtagttgcatgttaaaatcataataaattgttactaaagttttt 34174912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 396 - 467
Target Start/End: Complemental strand, 9355064 - 9354992
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgtt-aaatcataataaattattactaaagtttttatt 467  Q
    |||||| | |||||||| ||||||||||||||| ||||| ||||||||||||||| |||||||| ||||||||    
T  9355064 ttacatcagttatacgttaaaaagttgtagttgcatgttaaaatcataataaattgttactaaattttttatt 9354992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 605 - 709
Target Start/End: Complemental strand, 12499290 - 12499187
Alignment:
Q  605 tccatagccgtgtccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccatagcggatac 704  Q
    |||||| ||||| |||||||||| ||||||||||||||||||||||||||| ||||   ||||||||||||| |  ||||||  || ||||||||| ||     
T  12499290 tccatacccgtgcccatacccatacaaatttgcgggtaattacccataccc-aagcccagacccatgaaagcgggattttaccatacccatagcgggtat 12499192  T
Q  705 ttttt 709  Q
    |||||    
T  12499191 ttttt 12499187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 597 - 709
Target Start/End: Original strand, 26299803 - 26299914
Alignment:
Q  597 gtacagtatccatagccgtgtccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccata 696  Q
    |||||||  ||||| ||||| |||||||||| ||||||||||||||||||||||||||| ||||  | |||||||||||  | ||||||  ||| |||||    
T  26299803 gtacagtgcccatacccgtgcccatacccatacaaatttgcgggtaattacccataccc-aagcccgaacccatgaaagtggggttttatcctacccata 26299901  T
Q  697 gcggatacttttt 709  Q
    |||| || |||||    
T  26299902 gcgggtatttttt 26299914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 618 - 750
Target Start/End: Complemental strand, 28066942 - 28066813
Alignment:
Q  618 ccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccatagcggatacttttttgcggatc 717  Q
    ||||| ||||| |||||||||| ||||||||||||||| || |  ||||| |||||||| | ||||||| ||| ||||||||| || |||||||||| |     
T  28066942 ccatatccatttaaatttgcggataattacccataccc-aaacccggacctatgaaagcggggttttaccctacccatagcgggta-ttttttgcgggtg 28066845  T
Q  718 cccattggggtctgggtacaattgtcatcccta 750  Q
    |||| | |||||||||| | |||||||||||||    
T  28066844 ccca-tagggtctgggtcctattgtcatcccta 28066813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 123 - 219
Target Start/End: Original strand, 46783037 - 46783133
Alignment:
Q  123 catacccgcgtttgtaaaaaatgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcac 219  Q
    ||||||||| ||| ||||||||   |||||| ||||||||||||| |||||| ||||||  ||||||||||||  || |||||| ||||||||||||    
T  46783037 catacccgcatttataaaaaatacacgtaccctcgtgggcaacaactttagtccccttctccataccctatgggtacctaagtgcccatacccgcac 46783133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 251
Target Start/End: Complemental strand, 5023311 - 5023217
Alignment:
Q  156 cgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaacaaacaa 251  Q
    |||||||||||| ||||||  |||||| ||||||||||||  || |||||| ||||||||||||||||| |||| | ||||||| |||| ||||||    
T  5023311 cgtgggcaacaactttagtctccttcc-cataccctatgggtacctaagtgcccatacccgcacccattgcccgtactttaactatgaaaaaacaa 5023217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 597 - 655
Target Start/End: Original strand, 16562322 - 16562380
Alignment:
Q  597 gtacagtatccatagccgtgtccatacccattcaaatttgcgggtaattacccataccc 655  Q
    ||||||| | |||| ||||||||||||||||  ||||||||||||||||||||||||||    
T  16562322 gtacagtgttcatacccgtgtccatacccataaaaatttgcgggtaattacccataccc 16562380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 597 - 655
Target Start/End: Complemental strand, 16603340 - 16603282
Alignment:
Q  597 gtacagtatccatagccgtgtccatacccattcaaatttgcgggtaattacccataccc 655  Q
    ||||||| | |||| ||||||||||||||||  ||||||||||||||||||||||||||    
T  16603340 gtacagtgttcatacccgtgtccatacccataaaaatttgcgggtaattacccataccc 16603282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 261 - 334
Target Start/End: Original strand, 21153297 - 21153368
Alignment:
Q  261 accacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
    ||||||||||||||||||||  |  ||| |||||||||||||||||| |||||||||| |||| ||||||||||    
T  21153297 accacaattgaaataaaactgaa--ccaaaaaatttcaaatcaactcgtaaaatagtatgaattgtagtattta 21153368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 335
Target Start/End: Complemental strand, 25309642 - 25309457
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| |||| |||||||| |||||||||||||| ||| | ||||||  |  | ||||| |||||| ||||||| |||||||| |||||||  ||  |    
T  25309642 ccgtaccctcgtaggcaacaactttagtgcccttccacattctctatgggtatcttagtgttcatacctgcacccactacccgcactttaactacgagaa 25309543  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtatttaa 335  Q
     |||||       || |||||| |||||||||||||    || |||||||||||||||||||||||| |||| ||||||||| ||||||    
T  25309542 gacaataaaaa--tatcacaatggaaataaaactatggttca-aaaatttcaaatcaactcataaaaaagtatgaatcgtagcatttaa 25309457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 33979049 - 33979123
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaa 469  Q
    |||||| | |||||||| ||||||| ||||||| || ||||| |||||||||||| |||||||||||||||||||    
T  33979049 ttacatcagttatacgttaaaaagtagtagttgcatattaaaatcataataaattgttactaaagtttttattaa 33979123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 606 - 750
Target Start/End: Complemental strand, 34152078 - 34151937
Alignment:
Q  606 ccatagccgtgtccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccatagcggatact 705  Q
    ||||| ||||| ||||||||||  |||||||| ||||||||||||||||| ||||  ||| |||||||||| |  |||||| ||| ||||| ||| || |    
T  34152078 ccatacccgtgcccatacccatataaatttgcaggtaattacccataccc-aagccgggatccatgaaagcgggattttaccctacccataacgggta-t 34151981  T
Q  706 tttttgcggatccccattggggtctgggtacaattgtcatcccta 750  Q
    |||||||||||  ||| | || ||| ||| |||||||||||||||    
T  34151980 tttttgcggatgtcca-taggatcttggtccaattgtcatcccta 34151937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 606 - 750
Target Start/End: Original strand, 34175046 - 34175187
Alignment:
Q  606 ccatagccgtgtccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccatagcggatact 705  Q
    ||||| ||||| ||||||||||  |||||||| ||||||||||||||||| ||||  ||| |||||||||| |  |||||| ||| ||||| ||| || |    
T  34175046 ccatacccgtgcccatacccatataaatttgcaggtaattacccataccc-aagccgggatccatgaaagcgggattttaccctacccataacgggta-t 34175143  T
Q  706 tttttgcggatccccattggggtctgggtacaattgtcatcccta 750  Q
    |||||||||||  ||| | || ||| ||| |||||||||||||||    
T  34175144 tttttgcggatgtcca-taggatcttggtccaattgtcatcccta 34175187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 618 - 709
Target Start/End: Original strand, 2960314 - 2960404
Alignment:
Q  618 ccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccatagcggatacttttt 709  Q
    |||||||||||||||||||| ||||||||||||||||| |||     | |||| ||||||| ||||||| ||||||||||||| || |||||    
T  2960314 ccatacccattcaaatttgcaggtaattacccataccc-aagtccatatccattaaagcagggttttaccctatccatagcgggtatttttt 2960404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 606 - 709
Target Start/End: Complemental strand, 9354865 - 9354763
Alignment:
Q  606 ccatagccgtgtccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccatagcggatact 705  Q
    ||||| ||||| ||||||||||  ||||||||  |||||||  ||||||| |||  ||||||||||||||| | ||||||| ||| |||||||||||| |    
T  9354865 ccatatccgtggccatacccatataaatttgcaagtaattattcataccc-aagtctggacccatgaaagcggggttttaccctacccatagcggatatt 9354767  T
Q  706 tttt 709  Q
    ||||    
T  9354766 tttt 9354763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 144 - 219
Target Start/End: Original strand, 9477641 - 9477716
Alignment:
Q  144 tgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcac 219  Q
    |||||||||| ||||||||||||| |||| ||||||| | ||| ||||||||  || |||||| ||||||||||||    
T  9477641 tgtccgtaccctcgtgggcaacaactttaatgccctttcccatgccctatgggtacctaagtgcccatacccgcac 9477716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 206
Target Start/End: Original strand, 16560856 - 16560918
Alignment:
Q  144 tgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtg 206  Q
    |||||||||| ||| || |||||| ||||||| |||||| |||||||||||| ||||||||||    
T  16560856 tgtccgtaccctcgcggacaacaactttagtgtccttccccataccctatgggcacttaagtg 16560918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 206
Target Start/End: Complemental strand, 16604806 - 16604744
Alignment:
Q  144 tgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtg 206  Q
    |||||||||| ||| || |||||| ||||||| |||||| |||||||||||| ||||||||||    
T  16604806 tgtccgtaccctcgcggacaacaactttagtgtccttccccataccctatgggcacttaagtg 16604744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 612 - 649
Target Start/End: Complemental strand, 17171935 - 17171898
Alignment:
Q  612 ccgtgtccatacccattcaaatttgcgggtaattaccc 649  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  17171935 ccgtgtccatacccattaaaatttgcgggtaattaccc 17171898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 33067594 - 33067525
Alignment:
Q  150 taccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcac 219  Q
    |||| ||||||||||||| ||||||| |||||| ||||| ||||||  || |||||| ||||||||||||    
T  33067594 taccctcgtgggcaacaactttagtgtccttccccatactctatgggtacctaagtgcccatacccgcac 33067525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 612 - 649
Target Start/End: Original strand, 44301111 - 44301148
Alignment:
Q  612 ccgtgtccatacccattcaaatttgcgggtaattaccc 649  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  44301111 ccgtgtccatacccattaaaatttgcgggtaattaccc 44301148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 219
Target Start/End: Original strand, 39414563 - 39414635
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcac 219  Q
    ||||||||||||||||||||| | | || ||||||| ||||||||||||  | ||||||  ||||||||||||    
T  39414563 ccgtaccttcgtgggcaacaactatggtccccttccccataccctatgggtatttaagtacccatacccgcac 39414635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 244
Target Start/End: Original strand, 3362943 - 3363038
Alignment:
Q  149 gtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    ||||| |||||| |||||| |||||| ||||||| |||| | |||||  |  | | |||||||||||||| |||||||||||| ||||||| ||||    
T  3362943 gtaccctcgtggacaacaactttagtccccttccccatatcatatgggtatctcaatgtccatacccgcatccattacccgcactttaactatgaa 3363038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 612 - 655
Target Start/End: Original strand, 30391982 - 30392025
Alignment:
Q  612 ccgtgtccatacccattcaaatttgcgggtaattacccataccc 655  Q
    ||||| |||||| ||||||||||||| |||||||||||||||||    
T  30391982 ccgtgcccatactcattcaaatttgcaggtaattacccataccc 30392025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 334
Target Start/End: Original strand, 42284604 - 42284675
Alignment:
Q  263 cacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
    |||||||||||||||||||| | | | | | ||| |||| ||||||||||||| || |||||||||||||||    
T  42284604 cacaattgaaataaaactatgaacaaaatattttaaaattaactcataaaataatatgaatcgtagtattta 42284675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 405 - 474
Target Start/End: Original strand, 30391780 - 30391850
Alignment:
Q  405 ttatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaagttgt 474  Q
    |||||||| ||||||||  | ||| |||||||| |||||||||||| ||||||||  ||||||||||||||    
T  30391780 ttatacgttaaaaagttacacttggatgttaaagtcataataaattgttactaaaaattttattaagttgt 30391850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 266 - 335
Target Start/End: Complemental strand, 4912721 - 4912652
Alignment:
Q  266 aattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtatttaa 335  Q
    |||||||||||||||||    || ||| ||||||||||||| |||||||| || ||||||| ||||||||    
T  4912721 aattgaaataaaactatggttcaaaaactttcaaatcaacttataaaataatatgaatcgttgtatttaa 4912652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 612 - 649
Target Start/End: Complemental strand, 40788026 - 40787989
Alignment:
Q  612 ccgtgtccatacccattcaaatttgcgggtaattaccc 649  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  40788026 ccgtgtccatacccattaaaatttgctggtaattaccc 40787989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 1e-43; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 147 - 334
Target Start/End: Original strand, 221962 - 222149
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| ||||||| |||||| |||||||||||| ||| ||||||  ||||||||||||||||||||||||||||||| |||| |    
T  221962 ccgtaccctcgtgggcaacaactttagtgtccttccccataccctatgggcacctaagtgctcatacccgcacccattacccgcattttaactatgaaaa 222061  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
     ||||         |||||||||||||||||||||| | ||| ||||||||||||||||| |||||||| || |||||||||||||||    
T  222062 gacaaaaaaaaaaaaccacaattgaaataaaactatgatccaaaaaatttcaaatcaacttataaaataatatgaatcgtagtattta 222149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 147 - 334
Target Start/End: Original strand, 691117 - 691304
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| ||||||| |||||| |||||||||||| ||| ||||||  ||||||||||||||||||||||||||||||| |||| |    
T  691117 ccgtaccctcgtgggcaacaactttagtgtccttccccataccctatgggcacctaagtgctcatacccgcacccattacccgcattttaactatgaaaa 691216  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
     ||||         |||||||||||||||||||||| | ||| ||||||||||||||||| |||||||| || |||||||||||||||    
T  691217 gacaaaaaaaaaaaaccacaattgaaataaaactatgatccaaaaaatttcaaatcaacttataaaataatatgaatcgtagtattta 691304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 147 - 334
Target Start/End: Original strand, 735585 - 735772
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| ||||||| |||||| |||||||||||| ||| ||||||  ||||||||||||||||||||||||||||||| |||| |    
T  735585 ccgtaccctcgtgggcaacaactttagtgtccttccccataccctatgggcacctaagtgctcatacccgcacccattacccgcattttaactatgaaaa 735684  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
     ||||         |||||||||||||||||||||| | ||| ||||||||||||||||| |||||||| || |||||||||||||||    
T  735685 gacaaaaaaaaaaaaccacaattgaaataaaactatgatccaaaaaatttcaaatcaacttataaaataatatgaatcgtagtattta 735772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 147 - 333
Target Start/End: Original strand, 38020027 - 38020213
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| |||||| |||| | |||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||| |||| |    
T  38020027 ccgtaccctcgtggacaactactttagtgcccttccccataccctatgggcacctaagtgtccatacccgcacccattacccgcagtttaactctgaaaa 38020126  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattt 333  Q
     |||||        ||||||| ||||||| |||||| | ||| ||||||||||||||||||||||||||||| |||| |||||||||    
T  38020127 gacaataaaaaagcaccacaactgaaatacaactattatccagaaaatttcaaatcaactcataaaatagtatgaatggtagtattt 38020213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 147 - 334
Target Start/End: Original strand, 859481 - 859667
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| ||||||| |||||| |||||||||||| ||| ||||||  ||||||||||||||||||||||||||||||| |||| |    
T  859481 ccgtaccctcgtgggcaacaactttagtgtccttccccataccctatgggcacctaagtgctcatacccgcacccattacccgcattttaactatgaaaa 859580  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
     ||||         |||||||||||||||||||||| | ||| ||||||||||||||||| |||||||| || |||||||||||||||    
T  859581 gacaa-aaaaaaaaaccacaattgaaataaaactatgatccaaaaaatttcaaatcaacttataaaataatatgaatcgtagtattta 859667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 147 - 327
Target Start/End: Original strand, 7580036 - 7580213
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||| ||||| |||||||||||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||   ||||| |||| |    
T  7580036 ccgtaccctcgtgggtaacaactttagtgcccttccccataccctatgggcacctaagtgcccatacccgcacccattacccgca---taactatgaaaa 7580132  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgta 327  Q
     |||||        | |||||||||||||||| ||| | ||| |||||||||||||||||||||||||||| |||||||||    
T  7580133 gacaataaaaaagcatcacaattgaaataaaaatatgatccaaaaaatttcaaatcaactcataaaatagtgcgaatcgta 7580213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 147 - 239
Target Start/End: Original strand, 24789491 - 24789583
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaact 239  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||    
T  24789491 ccgtaccttcgtgggcaacaactttagtccccttcctcataccctatgggtacttaagtgtccatacccgcacccattacccgcactttaact 24789583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 147 - 334
Target Start/End: Original strand, 20216186 - 20216372
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| |||||||||||||| |||| | ||||| |||||||||| ||||||| |||||| ||||||||| |||  || |||| |    
T  20216186 ccgtaccctcgtgggcaacaactttagtgcccttccccatatcttatgggcacttaagtgcccatacctgcacccgttacccgcactttctctatgaaaa 20216285  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
     |||||        | |||||||||||||||||||| | ||| ||   || ||||||||| |||||||||||||||||||||||||||    
T  20216286 gacaataaaaaac-atcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaatagtacgaatcgtagtattta 20216372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 147 - 334
Target Start/End: Original strand, 20235784 - 20235970
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| |||||||||||||| |||| | ||||| |||||||||| ||||||| |||||| ||||||||| |||  || |||| |    
T  20235784 ccgtaccctcgtgggcaacaactttagtgcccttccccatatcttatgggcacttaagtgcccatacctgcacccgttacccgcactttctctatgaaaa 20235883  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
     |||||        | |||||||||||||||||||| | ||| ||   || ||||||||| |||||||||||||||||||||||||||    
T  20235884 gacaataaaaaac-atcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaatagtacgaatcgtagtattta 20235970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 147 - 251
Target Start/End: Original strand, 1376164 - 1376268
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||||||||||||||||| |||||| || ||||| |||||||||||  || |||||| |||||||||||||||||||||||| ||||||| |||| |    
T  1376164 ccgtaccttcgtgggcaacaactttagtcccattccttataccctatgggtacctaagtgcccatacccgcacccattacccgcactttaactatgaaaa 1376263  T
Q  247 aacaa 251  Q
    |||||    
T  1376264 aacaa 1376268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 147 - 244
Target Start/End: Complemental strand, 19643643 - 19643546
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||  |  || ||| |||||||||| ||||||||||||| ||||||| ||||    
T  19643643 ccgtaccttcgtgggcaacaactttagtgcccttcctcataccctatgggtatctaggtgcccatacccgcgcccattacccgcactttaactatgaa 19643546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 144 - 244
Target Start/End: Complemental strand, 2621093 - 2620993
Alignment:
Q  144 tgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtga 243  Q
    |||||||||| ||||||||||||| ||||||||| |||| ||||||||||||  |  |||||| ||||||| |||||||||||||||| ||||||| |||    
T  2621093 tgtccgtaccctcgtgggcaacaactttagtgccattccccataccctatgggtatctaagtgcccatacctgcacccattacccgcactttaactatga 2620994  T
Q  244 a 244  Q
    |    
T  2620993 a 2620993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 147 - 251
Target Start/End: Complemental strand, 3616994 - 3616890
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| |||||| ||||||| ||||||||||||  || |||||  |||||| |||||| |||||||||| ||||||| |||| |    
T  3616994 ccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacctaagtacccatactcgcacctattacccgcactttaactatgaaaa 3616895  T
Q  247 aacaa 251  Q
    |||||    
T  3616894 aacaa 3616890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 155 - 238
Target Start/End: Original strand, 1667243 - 1667326
Alignment:
Q  155 tcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaac 238  Q
    ||||||||||||| |||||||||||||| ||||||||||||  || |||||| |||||||||||||||||| || || ||||||    
T  1667243 tcgtgggcaacaactttagtgcccttccccataccctatgggtacctaagtgcccatacccgcacccattaacctcactttaac 1667326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 148 - 219
Target Start/End: Original strand, 38551558 - 38551629
Alignment:
Q  148 cgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcac 219  Q
    |||||| ||||||||||||| ||||| |||||||| |||||||||||| |||||||||| ||||||||||||    
T  38551558 cgtaccctcgtgggcaacaactttagcgcccttccccataccctatgggcacttaagtgcccatacccgcac 38551629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 148 - 244
Target Start/End: Original strand, 6109602 - 6109698
Alignment:
Q  148 cgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    |||| ||||||||||||||| ||||||||| || |  |||||||||||  || ||||||  ||||||||||||||||||||||| ||||||| ||||    
T  6109602 cgtatcttcgtgggcaacaactttagtgccttttccaataccctatgggtacctaagtgctcatacccgcacccattacccgcactttaactatgaa 6109698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 38551783 - 38551857
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaa 469  Q
    |||||| | |||||||| ||||||||||||||| |||||||| |||||||||||| || ||||||||||||||||    
T  38551783 ttacatcagttatacgttaaaaagttgtagttgcatgttaaaatcataataaattgttgctaaagtttttattaa 38551857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 244
Target Start/End: Original strand, 25419246 - 25419343
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    ||||||| |||||| |||||| |||||| ||||| | ||||||||||||  ||||||||| |||||| ||| ||||||||| ||| ||||||| ||||    
T  25419246 ccgtaccgtcgtggacaacaactttagtaccctttcccataccctatgggtacttaagtgcccatacacgctcccattacctgcactttaactatgaa 25419343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 244
Target Start/End: Complemental strand, 26561349 - 26561260
Alignment:
Q  155 tcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    ||||||||||||| |||||||||||||| ||| |||||||   || |||||| |||||||| |||||||||| |||| ||||||| ||||    
T  26561349 tcgtgggcaacaactttagtgcccttccccatgccctatgagtacctaagtgcccatacccacacccattacacgcactttaactatgaa 26561260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 597 - 686
Target Start/End: Original strand, 38551979 - 38552067
Alignment:
Q  597 gtacagtatccatagccgtgtccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttac 686  Q
    ||||||| || ||| ||||| ||||||||||  |||||||||||||||||||||||||| ||||  |||||||||||||| | |||||||    
T  38551979 gtacagtgtctatatccgtgcccatacccatataaatttgcgggtaattacccataccc-aagcccggacccatgaaagcggggttttac 38552067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 239
Target Start/End: Complemental strand, 2472410 - 2472318
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaact 239  Q
    ||||||| |||||| |||||| ||||||||| |||| ||||||||||||  || |||||| ||||||||||| |||| ||||| | |||||||    
T  2472410 ccgtaccctcgtggacaacaactttagtgccattccccataccctatgggtacataagtgcccatacccgcatccataacccgtactttaact 2472318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 148 - 244
Target Start/End: Complemental strand, 24891546 - 24891450
Alignment:
Q  148 cgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    |||||| |||||| |||||| |||||| ||||| | ||||||||||||  || |||||| |  ||||||||||||||||||||| ||||||| ||||    
T  24891546 cgtaccgtcgtggacaacaactttagtaccctttcccataccctatgggtacctaagtgcctgtacccgcacccattacccgcactttaactatgaa 24891450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 25500133 - 25500215
Alignment:
Q  155 tcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaa 237  Q
    |||||| |||||| |||||| ||||||| |||||| |||||  || |||||| |||||||||||||||||||| ||| |||||    
T  25500133 tcgtggacaacaactttagtacccttccccataccttatgggtacctaagtgcccatacccgcacccattacctgcactttaa 25500215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 294 - 335
Target Start/End: Complemental strand, 29528172 - 29528131
Alignment:
Q  294 tttcaaatcaactcataaaatagtacgaatcgtagtatttaa 335  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  29528172 tttcaaatcaactcataaaatagtacgaatcgtattatttaa 29528131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 237
Target Start/End: Original strand, 15542096 - 15542203
Alignment:
Q  129 cgcgtttgtaaaaaatgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattaccc 228  Q
    ||||||||||||||||||  ||||| || |||| ||||| ||||||| |||| |||||| | ||||| ||| |||||| ||||||||  ||||||||||     
T  15542096 cgcgtttgtaaaaaatgtttgtaccctcatgggtaacaactttagtgtcctt-ctcatatcttatgggcacctaagtgcccatacccatacccattacct 15542194  T
Q  229 gcattttaa 237  Q
    ||| |||||    
T  15542195 gcactttaa 15542203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 144 - 227
Target Start/End: Original strand, 30801224 - 30801307
Alignment:
Q  144 tgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacc 227  Q
    |||||||||| ||| |||||||||  || |||||| |||  |||||||||||  || |||||||||||||||| ||||||||||    
T  30801224 tgtccgtaccctcgagggcaacaaccttggtgcccatccctataccctatgggtacctaagtgtccatacccgtacccattacc 30801307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 15961793 - 15961711
Alignment:
Q  155 tcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaa 237  Q
    ||||||| ||||| |||||| ||||||||||||  |||||| ||| || ||| ||||||  | ||||||||||||||||||||    
T  15961793 tcgtgggtaacaactttagtacccttcctcatattctatgggcacctacgtgcccatacatgtacccattacccgcattttaa 15961711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 597 - 655
Target Start/End: Original strand, 38552200 - 38552258
Alignment:
Q  597 gtacagtatccatagccgtgtccatacccattcaaatttgcgggtaattacccataccc 655  Q
    ||||||| |||||| ||||||||||||||||  |||||||||| |||||| ||||||||    
T  38552200 gtacagtgtccatatccgtgtccatacccatataaatttgcggataattatccataccc 38552258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 252
Target Start/End: Original strand, 7057592 - 7057689
Alignment:
Q  155 tcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaacaaacaat 252  Q
    |||||| ||||||  || |||||||||| ||||||||||||  || ||||||  ||||| || ||||||||| |||| ||||||| |||| |||||||    
T  7057592 tcgtggacaacaaccttggtgcccttccccataccctatgggtacctaagtgcacatactcgtacccattactcgcactttaactatgaaaaaacaat 7057689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 612 - 649
Target Start/End: Original strand, 20216599 - 20216636
Alignment:
Q  612 ccgtgtccatacccattcaaatttgcgggtaattaccc 649  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  20216599 ccgtgtccatacccattaaaatttgcgggtaattaccc 20216636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 612 - 649
Target Start/End: Original strand, 20236197 - 20236234
Alignment:
Q  612 ccgtgtccatacccattcaaatttgcgggtaattaccc 649  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  20236197 ccgtgtccatacccattaaaatttgcgggtaattaccc 20236234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 290 - 335
Target Start/End: Original strand, 43239302 - 43239347
Alignment:
Q  290 aaaatttcaaatcaactcataaaatagtacgaatcgtagtatttaa 335  Q
    ||||||||||| |||||||||||||||||||||| || ||||||||    
T  43239302 aaaatttcaaaccaactcataaaatagtacgaattgtggtatttaa 43239347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 28970823 - 28970897
Alignment:
Q  157 gtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgca 231  Q
    |||||||| || ||| |||||| ||| |||||| |||||| |  |||||| ||||||||||||||| ||||||||    
T  28970823 gtgggcaataagtttggtgcccgtccccataccttatggatatctaagtgcccatacccgcacccaatacccgca 28970897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 294 - 335
Target Start/End: Original strand, 43511316 - 43511357
Alignment:
Q  294 tttcaaatcaactcataaaatagtacgaatcgtagtatttaa 335  Q
    ||||||||||||||||||||||||| |  |||||||||||||    
T  43511316 tttcaaatcaactcataaaatagtatggttcgtagtatttaa 43511357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 1e-37; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 144 - 327
Target Start/End: Complemental strand, 4902072 - 4901892
Alignment:
Q  144 tgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtga 243  Q
    |||||||||| ||||||| ||||| |||||||||||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||   ||||| |||    
T  4902072 tgtccgtaccctcgtgggtaacaactttagtgcccttccccataccctatgggcacctaagtgcccatacccgcacccattacccgca---taactatga 4901976  T
Q  244 acaaacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgta 327  Q
    | | |||||        | |||||||||||||||| ||| | ||| ||||||||||||||||||||||||||||| ||||||||    
T  4901975 aaagacaataaaaaagcatcacaattgaaataaaaatatgatccaaaaaatttcaaatcaactcataaaatagtatgaatcgta 4901892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 147 - 335
Target Start/End: Complemental strand, 15674107 - 15673920
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| ||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||| ||||| ||||||| |||| |    
T  15674107 ccgtaccctcgtgggcaacaactttcgtgcccttcc-cataccctatgggcacctaagtgtccatacccgcacccattatccgcaatttaactctgaaaa 15674009  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtatttaa 335  Q
     |||||        ||||||| ||||||| || ||| | ||| ||||||||||||||||||||||||| ||| |||| |||||||||||    
T  15674008 gacaataaaaaagcaccacaactgaaatacaattatgatccagaaaatttcaaatcaactcataaaatggtatgaatagtagtatttaa 15673920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 147 - 335
Target Start/End: Complemental strand, 33347204 - 33347016
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| ||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||| | ||| ||||||| |||| |    
T  33347204 ccgtaccctcgtgggcaacaactttcgtgcccttccccataccctatgggcacctaagtgtccatacccgcacccattatctgcaatttaactctgaaaa 33347105  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtatttaa 335  Q
     |||||        ||||||| ||||||| || ||| | ||| ||||||||||||||||||||||||| ||| |||| |||||||||||    
T  33347104 gacaataaaaaagcaccacaactgaaatacaattatgatccagaaaatttcaaatcaactcataaaatggtatgaatagtagtatttaa 33347016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 113 - 335
Target Start/End: Original strand, 35935245 - 35935473
Alignment:
Q  113 tacccatcttcatacccgcgtttgtaaaaaat------gtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtg 206  Q
    |||||||| |||||||| ||||||||||||||      | ||||||| ||||||||||||| |||||||||||||  ||||||||| || ||| ||||||    
T  35935245 tacccatcctcatacccacgtttgtaaaaaatacccgggcccgtaccctcgtgggcaacaactttagtgcccttctccataccctacgggcacctaagtg 35935344  T
Q  207 tccatacccgcacccattacccgcattttaactgtgaacaaacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaact 306  Q
     ||||||||||||||||||||| || ||||||| |||| | |||||        ||||||| ||||||| |||||| | ||| |||||||||||||||||    
T  35935345 cccatacccgcacccattacccacagtttaactctgaaaagacaataaaaaagcaccacaactgaaatacaactatgatccagaaaatttcaaatcaact 35935444  T
Q  307 cataaaatagtacgaatcgtagtatttaa 335  Q
    ||||||| | || |||| ||| |||||||    
T  35935445 cataaaagaatatgaatggtactatttaa 35935473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 32302346 - 32302457
Alignment:
Q  123 catacccgcgtttgtaaaaaatgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcaccca 222  Q
    ||||||||||||||||||||||| ||||||  ||||||||||||| ||||||| |||||| |||||| ||||| |||||||||| |||||||||||||||    
T  32302346 catacccgcgtttgtaaaaaatgcccgtac--tcgtgggcaacaactttagtgtccttccccataccttatgggcacttaagtgcccatacccgcaccca 32302443  T
Q  223 ttacccgcatttta 236  Q
    ||||||||| ||||    
T  32302444 ttacccgcacttta 32302457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 35853479 - 35853590
Alignment:
Q  123 catacccgcgtttgtaaaaaatgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcaccca 222  Q
    |||||||||||||||||||||||  ||||||  |||||||||||| ||||||| |||||| |||||||||||| |||||||||| |||||||||||||||    
T  35853479 catacccgcgtttgtaaaaaatgctcgtacc--cgtgggcaacaactttagtgtccttccccataccctatgggcacttaagtgcccatacccgcaccca 35853576  T
Q  223 ttacccgcatttta 236  Q
    ||||||||| ||||    
T  35853577 ttacccgcacttta 35853590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 147 - 334
Target Start/End: Complemental strand, 19254616 - 19254430
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| |||||| |||||| |||||||||||||| |||||||||||  |||||||||| |||||||||||||||||||||||| |||  || |||| |    
T  19254616 ccgtaccctcgtggacaacaactttagtgcccttccccataccctatgagcacttaagtgcccatacccgcacccattacccgcactttctctatgaaaa 19254517  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
     |||||        | |||||||||||||||||||| | ||| ||   || ||||||||| ||||||||||| |||||||||||||||    
T  19254516 gacaataaaaaac-atcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaatagtatgaatcgtagtattta 19254430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 148 - 334
Target Start/End: Complemental strand, 639489 - 639304
Alignment:
Q  148 cgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaacaa 247  Q
    |||||| ||||||||||||| ||||||| | |||| ||||||||||||  ||||||||| ||||||||||| | ||||||||||  |||||  |||| |     
T  639489 cgtaccctcgtgggcaacaactttagtgtctttccccataccctatgggtacttaagtgcccatacccgcatcaattacccgcacattaaccatgaaaag 639390  T
Q  248 acaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
    | |||        |||||||||||||||||| ||| | ||| ||||||||||||||||| |||||||||||  ||||||||||||||    
T  639389 aaaataaaaaac-accacaattgaaataaaattatgatccaaaaaatttcaaatcaactaataaaatagtataaatcgtagtattta 639304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 149 - 335
Target Start/End: Original strand, 16186749 - 16186934
Alignment:
Q  149 gtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaacaaa 248  Q
    ||||| ||||| ||||||| |||||| || |||| |||||  |||||  ||||||||| |||||| ||||||||||||||||| |||||| ||||| | |    
T  16186749 gtaccctcgtgagcaacaactttagttcctttccacatactttatgggtacttaagtgcccatacacgcacccattacccgcactttaaccgtgaaaaga 16186848  T
Q  249 caatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtatttaa 335  Q
    ||||        |||| ||||||||||||| ||| | ||| ||||||||||||||||| |||||||||||  |||||||||||||||    
T  16186849 caataaaaaac-accataattgaaataaaattatgatccaaaaaatttcaaatcaactaataaaatagtataaatcgtagtatttaa 16186934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 144 - 252
Target Start/End: Original strand, 7978007 - 7978115
Alignment:
Q  144 tgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtga 243  Q
    |||||||||| ||||||||||||| |||||||||||||| ||||||||||||  |  ||||||  ||||||||||||||||||||||| ||||||| |||    
T  7978007 tgtccgtaccctcgtgggcaacaactttagtgcccttccccataccctatgggtatctaagtgctcatacccgcacccattacccgcactttaactatga 7978106  T
Q  244 acaaacaat 252  Q
    | |||||||    
T  7978107 aaaaacaat 7978115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 147 - 239
Target Start/End: Original strand, 14645294 - 14645386
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaact 239  Q
    ||||||| ||||||||||||| |||||| |||| || ||||||||||||  |||||||||||||||||||||||||||||||||| |||||||    
T  14645294 ccgtaccctcgtgggcaacaactttagtcccctcccccataccctatgggtacttaagtgtccatacccgcacccattacccgcactttaact 14645386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 395 - 496
Target Start/End: Complemental strand, 639251 - 639149
Alignment:
Q  395 tttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaagttgtattaagatgttttagcgtt 493  Q
    ||||||| |||||||||| ||||||||| ||||| |||||||| |||||||||||| ||| ||||||||||||||||||| |||||| |||||||| |||    
T  639251 tttacatcaattatacgttaaaaagttgcagttgcatgttaaagtcataataaattgttaataaagtttttattaagttgcattaagctgttttagagtt 639152  T
Q  494 agg 496  Q
    |||    
T  639151 agg 639149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 147 - 334
Target Start/End: Complemental strand, 41692596 - 41692410
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| |||| ||||||||| |||||||||||| ||||||||||  ||||||| ||||||||||||||| |||  || |||| |    
T  41692596 ccgtaccctcgtgggcaacaactttaatgcccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcactttctctatgaaaa 41692497  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
     |||||        | |||||||||||||||||||| | ||| ||   || ||||||||| |||||||| ||||||| ||||||||||    
T  41692496 gacaataaaaaac-atcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaataatacgaattgtagtattta 41692410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 147 - 244
Target Start/End: Original strand, 41616563 - 41616660
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    ||||||| ||||||||||||| |||||| ||||||  ||||||||||||  ||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  41616563 ccgtaccctcgtgggcaacaactttagtccccttctccataccctatgggtacttaagtgcccatacccgcacccattacccgcactttaactatgaa 41616660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 30774783 - 30774875
Alignment:
Q  144 tgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcatttta 236  Q
    |||||||||| ||||||||||||| |||||||||||||| |||||||||| | |||||||||| | ||||||||||||| |||||||| ||||    
T  30774783 tgtccgtaccctcgtgggcaacaactttagtgcccttccccataccctataggcacttaagtgcctatacccgcacccactacccgcacttta 30774875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 147 - 334
Target Start/End: Complemental strand, 34718912 - 34718726
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| |||||| |||||| |||| ||||||||| |||||||||||| ||||||||||  ||||||| ||||||||||||||| |||  || |||| |    
T  34718912 ccgtaccctcgtggacaacaactttaatgcccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcactttctctatgaaaa 34718813  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
     |||||        | |||||||||||||||||||| | ||| ||   || ||||||||| |||||||| ||||||| ||||||||||    
T  34718812 gacaataaaaaac-atcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaataatacgaattgtagtattta 34718726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 144 - 244
Target Start/End: Original strand, 29455767 - 29455867
Alignment:
Q  144 tgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtga 243  Q
    |||||||||| ||||||||||||| |||||||||||||| |||||| |||||  |  |||||| ||||||||||||||||||||| || ||||||| |||    
T  29455767 tgtccgtaccctcgtgggcaacaactttagtgcccttccccataccttatgggtatctaagtgcccatacccgcacccattacccacactttaactatga 29455866  T
Q  244 a 244  Q
    |    
T  29455867 a 29455867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 395 - 496
Target Start/End: Original strand, 16186987 - 16187089
Alignment:
Q  395 tttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaagttgtattaagatgttttagcgtt 493  Q
    ||||||| |||||||||| ||||||||| ||||  |||||||| |||||||||||| ||||||||  ||||||||||||| |||||| |||||||| |||    
T  16186987 tttacatcaattatacgttaaaaagttgcagttacatgttaaagtcataataaattgttactaaacattttattaagttgcattaagctgttttagagtt 16187086  T
Q  494 agg 496  Q
    |||    
T  16187087 agg 16187089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 597 - 750
Target Start/End: Original strand, 30775221 - 30775371
Alignment:
Q  597 gtacagtatccatagccgtgtccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccata 696  Q
    ||||||| |||||| ||||| ||||||||||  |||||||||||||||||||||||||| |||   ||| | |||||||| | ||||||| ||| |||||    
T  30775221 gtacagtgtccatacccgtgcccatacccatataaatttgcgggtaattacccataccc-aagtccggatctatgaaagcggagttttaccctacccata 30775319  T
Q  697 gcggatacttttttgcggatccccattggggtctgggtacaattgtcatcccta 750  Q
    | ||||| |||||||||||| | || | ||||||| || |||||||||||||||    
T  30775320 gtggata-ttttttgcggatgctca-tagggtctgtgttcaattgtcatcccta 30775371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 36470579 - 36470490
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcatttta 236  Q
    ||||||| | ||||||||||| |||||||||||||| ||||| ||||||  || ||||||||||||||||||||||||||| ||| ||||    
T  36470579 ccgtacccttgtgggcaacaactttagtgcccttccccatactctatgggtacctaagtgtccatacccgcacccattaccagcacttta 36470490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 147 - 251
Target Start/End: Original strand, 1060927 - 1061031
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| |||||| ||||||| |||| |||||||  || ||| || ||||||||||||||||||| |||| ||||||| |||| |    
T  1060927 ccgtaccctcgtgggcaacaactttagtccccttccccatatcctatgggtacctaattgcccatacccgcacccattacacgcactttaactatgaaaa 1061026  T
Q  247 aacaa 251  Q
    |||||    
T  1061027 aacaa 1061031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 147 - 251
Target Start/End: Original strand, 14088248 - 14088351
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| |||| |||||||| |||||| ||||||| ||||||||||||  || |||||| ||||||||| |||||||||||||| ||||||| |||| |    
T  14088248 ccgtaccctcgtaggcaacaactttagtccccttccccataccctatggt-acctaagtgcccatacccgtacccattacccgcactttaactatgaaaa 14088346  T
Q  247 aacaa 251  Q
    |||||    
T  14088347 aacaa 14088351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 147 - 219
Target Start/End: Complemental strand, 15719310 - 15719238
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcac 219  Q
    ||||||| ||||||||||||| |||||| ||||||||||||||||||||  ||||||||| ||||||||||||    
T  15719310 ccgtaccctcgtgggcaacaactttagtccccttcctcataccctatgggtacttaagtgcccatacccgcac 15719238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 157 - 334
Target Start/End: Complemental strand, 6277933 - 6277755
Alignment:
Q  157 gtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccata--cccgcacccattacccgcattttaactgtgaacaaacaatnn 254  Q
    ||||||||||| |||||||| ||||| |||||||||||| |||||||||| |||||  ||||||||||||||||||| |||  || |||| | |||||      
T  6277933 gtgggcaacaactttagtgctcttccccataccctatgggcacttaagtgcccatacccccgcacccattacccgcactttctctatgaaaagacaatat 6277834  T
Q  255 nnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
          |  ||||||||||||||||||| | ||| ||   || |||||| || |||||||||||||||||||| ||||||    
T  6277833 aaaac-attacaattgaaataaaactatgatccaaaattatttaaatcatctaataaaatagtacgaatcgtaatattta 6277755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 30775025 - 30775099
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaa 469  Q
    |||||| | |||||||| ||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||    
T  30775025 ttacatcagttatacgttaaaaagttgtagttgcatgttaaaatcataataaattgttactaaagtttttattaa 30775099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 32302608 - 32302682
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaa 469  Q
    |||||| | |||||||| ||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||    
T  32302608 ttacatcagttatacgttaaaaagttgtagttgcatgttaaaatcataataaattgttactaaagtttttattaa 32302682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 396 - 469
Target Start/End: Original strand, 35853741 - 35853815
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaa 469  Q
    |||||| | |||||||| ||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||    
T  35853741 ttacatcagttatacgttaaaaagttgtagttgcatgttaaaatcataataaattgttactaaagtttttattaa 35853815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 147 - 334
Target Start/End: Original strand, 38309755 - 38309941
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| || ||||||||||||||||| ||||| | |||||||||||| ||||||||||  ||||||||||| ||||| ||||| |||  || |||| |    
T  38309755 ccgtaccctcatgggcaacaattttagtaccctttcccataccctatgggcacttaagtgctcatacccgcacacattatccgcactttctctatgaaaa 38309854  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
     ||||         | |||||||||||||||||||| | ||  ||   || ||||||||| |||||||||||||||||||| ||||||    
T  38309855 gacaa-caaaaaacatcacaattgaaataaaactatgatccgaaattatttaaatcaactaataaaatagtacgaatcgtaatattta 38309941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 147 - 252
Target Start/End: Original strand, 14087643 - 14087747
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| ||||||||| |||| ||||||||||||  |  |||||| ||||||||||| |||||| ||||| ||||||| |||| |    
T  14087643 ccgtaccctcgtgggcaacaactttagtgcctttccccataccctatgggtatctaagtgcccatacccgca-ccattatccgcactttaactatgaaaa 14087741  T
Q  247 aacaat 252  Q
    ||||||    
T  14087742 aacaat 14087747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 405 - 469
Target Start/End: Original strand, 14645878 - 14645943
Alignment:
Q  405 ttatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaa 469  Q
    |||||||| ||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||    
T  14645878 ttatacgttaaaaagttgtagttgcatgttaaaatcataataaattgttactaaagtttttattaa 14645943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 224
Target Start/End: Original strand, 10937403 - 10937477
Alignment:
Q  150 taccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccatt 224  Q
    |||| ||||||| ||||| |||||||||||||| |||||||||||| ||| |||||| ||||||||| |||||||    
T  10937403 taccctcgtgggtaacaactttagtgcccttccccataccctatgggcacctaagtgcccatacccgtacccatt 10937477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 169 - 323
Target Start/End: Complemental strand, 24489179 - 24489027
Alignment:
Q  169 tttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaacaaacaatnnnnnnntaccacaat 268  Q
    |||||| || ||||||||||||||||  ||| | | || | ||||||||||||||||||| || ||||||| |||| | |||||       || ||||||    
T  24489179 tttagtacctttcctcataccctatgcgcaccttaatgcctatacccgcacccattacccacactttaactatgaaaagacaataaaaa--tatcacaat 24489082  T
Q  269 tgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaat 323  Q
    ||||||||||||||    || ||| ||||||||||||||||||||||||| ||||    
T  24489081 tgaaataaaactatggttcaaaaattttcaaatcaactcataaaatagtatgaat 24489027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 597 - 652
Target Start/End: Complemental strand, 3049447 - 3049392
Alignment:
Q  597 gtacagtatccatagccgtgtccatacccattcaaatttgcgggtaattacccata 652  Q
    ||||||| |||||| |||||||||||||||||||||||| | ||||||||||||||    
T  3049447 gtacagtgtccatatccgtgtccatacccattcaaatttactggtaattacccata 3049392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 618 - 709
Target Start/End: Original strand, 16187201 - 16187291
Alignment:
Q  618 ccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccatagcggatacttttt 709  Q
    ||||||||||| |||||||||||||||||||||||||| || | | || |||||||||| | ||||||| ||| ||||||| |||| |||||    
T  16187201 ccatacccatttaaatttgcgggtaattacccatacccaaaccct-gatccatgaaagcggagttttaccctacccatagcagatatttttt 16187291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 263 - 334
Target Start/End: Complemental strand, 16620327 - 16620256
Alignment:
Q  263 cacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
    |||||||||||||||||||| | ||| ||||||| |||||||||  |||||||||||||||| | |||||||    
T  16620327 cacaattgaaataaaactatgatccaaaaaattttaaatcaactagtaaaatagtacgaatcatcgtattta 16620256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 187
Target Start/End: Original strand, 42030825 - 42030888
Alignment:
Q  124 atacccgcgtttgtaaaaaatgtccgtaccttcgtgggcaacaattttagtgcccttcctcata 187  Q
    |||| ||||||||||||||||||||||| ||||||||| ||||| |||||||| ||||| ||||    
T  42030825 atacacgcgtttgtaaaaaatgtccgtatcttcgtgggtaacaactttagtgctcttccccata 42030888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 156 - 334
Target Start/End: Original strand, 19549338 - 19549516
Alignment:
Q  156 cgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaacaaacaatnnn 255  Q
    |||||||||||| ||| ||  |||||| ||||||| ||||  || |||||  |||||||| ||||||||||||||| ||||||| |||| | |||||       
T  19549338 cgtgggcaacaactttggtatccttccccataccccatgggtacctaagtacccatacccacacccattacccgcactttaactatgaaaagacaat-aa 19549436  T
Q  256 nnnntaccacaattg-aaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
        ||  ||||||| ||||||||||||   |   ||| ||||||||||||||||||||||||||||||| || ||||||    
T  19549437 aatatattacaattgaaaataaaactatggtctcaaaattttcaaatcaactcataaaatagtacgaatcataatattta 19549516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 294 - 334
Target Start/End: Original strand, 30900 - 30940
Alignment:
Q  294 tttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  30900 tttcaaatcaactcataaaagagtacgaatcgtagtattta 30940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 612 - 750
Target Start/End: Complemental strand, 19254163 - 19254029
Alignment:
Q  612 ccgtgtccatacccattcaaatttgcgggtaattacccataccc-taagcatggacccatgaaagcagtgttttacactatccatagcggatactttttt 710  Q
    ||||||||||||||||| |||||||||||||||||||| ||||| ||  |||  |||||||||||| | ||||||| ||| |||| | || || ||||||    
T  19254163 ccgtgtccatacccattaaaatttgcgggtaattaccc-tacccgtacccat--acccatgaaagcggggttttaccctacccattgtgggta-tttttt 19254068  T
Q  711 gcggatccccattggggtctgggtacaattgtcatcccta 750  Q
    || | | |||| | |||||||||| |||||||||||||||    
T  19254067 gctggtgccca-tcgggtctgggtccaattgtcatcccta 19254029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 244
Target Start/End: Complemental strand, 22632373 - 22632276
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    ||||||||||||   |||||| ||||||||| |||| |||||| |||||  || ||||||  |||||| |||| ||||||||||| ||||||| ||||    
T  22632373 ccgtaccttcgtatacaacaactttagtgccattccccataccttatgggtacctaagtgatcatacctgcactcattacccgcactttaactatgaa 22632276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 290 - 335
Target Start/End: Complemental strand, 25828406 - 25828361
Alignment:
Q  290 aaaatttcaaatcaactcataaaatagtacgaatcgtagtatttaa 335  Q
    ||||||||||||||| ||||||||||||| |||| |||||||||||    
T  25828406 aaaatttcaaatcaaatcataaaatagtatgaattgtagtatttaa 25828361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 612 - 649
Target Start/End: Complemental strand, 34718499 - 34718462
Alignment:
Q  612 ccgtgtccatacccattcaaatttgcgggtaattaccc 649  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  34718499 ccgtgtccatacccattaaaatttgcgggtaattaccc 34718462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 612 - 649
Target Start/End: Complemental strand, 41692183 - 41692146
Alignment:
Q  612 ccgtgtccatacccattcaaatttgcgggtaattaccc 649  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  41692183 ccgtgtccatacccattaaaatttgcgggtaattaccc 41692146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 618 - 714
Target Start/End: Complemental strand, 639038 - 638944
Alignment:
Q  618 ccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccatagcggatacttttttgcgg 714  Q
    ||||| ||||| |||||||||||||||||| ||||||| || |  |||||||||||||| | ||||||| ||| ||| | |||||| ||||||||||    
T  639038 ccatatccatttaaatttgcgggtaattacacataccc-aaacccggacccatgaaagcggggttttaccctacccacatcggata-ttttttgcgg 638944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 6224961 - 6224913
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatgg 195  Q
    ||||||| || |||||||||| |||||||||||||| ||||||||||||    
T  6224961 ccgtaccctcatgggcaacaactttagtgcccttccccataccctatgg 6224913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 298 - 334
Target Start/End: Original strand, 6311111 - 6311147
Alignment:
Q  298 aaatcaactcataaaatagtacgaatcgtagtattta 334  Q
    |||||||||||||||||||||||||| ||||||||||    
T  6311111 aaatcaactcataaaatagtacgaattgtagtattta 6311147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 298 - 334
Target Start/End: Complemental strand, 25694654 - 25694618
Alignment:
Q  298 aaatcaactcataaaatagtacgaatcgtagtattta 334  Q
    ||||||||| |||||||||||||||||||||||||||    
T  25694654 aaatcaactaataaaatagtacgaatcgtagtattta 25694618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 195
Target Start/End: Complemental strand, 25828531 - 25828459
Alignment:
Q  123 catacccgcgtttgtaaaaaatgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatgg 195  Q
    ||||||||||||||||||| ||    ||||| |||||| |||||| |||||| |||||||||||||| |||||    
T  25828531 catacccgcgtttgtaaaatatacttgtaccctcgtggacaacaactttagtacccttcctcataccatatgg 25828459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 630 - 686
Target Start/End: Original strand, 32302824 - 32302879
Alignment:
Q  630 aaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttac 686  Q
    |||||||||||||||||||||||||| ||||  |||||||||||||| | |||||||    
T  32302824 aaatttgcgggtaattacccataccc-aagcccggacccatgaaagcggggttttac 32302879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 597 - 709
Target Start/End: Original strand, 35853932 - 35854043
Alignment:
Q  597 gtacagtatccatagccgtgtccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccata 696  Q
    |||||||  ||||| ||||  ||||||||||  |||||||||||||||||||||||||| ||||  ||| |||||||| | | ||||||| ||| |||||    
T  35853932 gtacagtgcccatacccgttcccatacccatataaatttgcgggtaattacccataccc-aagcccggatccatgaaaacggggttttaccctacccata 35854030  T
Q  697 gcggatacttttt 709  Q
     ||| || |||||    
T  35854031 acgggtatttttt 35854043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 396 - 470
Target Start/End: Complemental strand, 3049661 - 3049586
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaag 470  Q
    |||||| | |||||||| ||||||||||||||| |||||||| |  ||||||||| |||||||||  |||||||||    
T  3049661 ttacatcagttatacgttaaaaagttgtagttgcatgttaaagttctaataaattgttactaaagcctttattaag 3049586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 23141742 - 23141655
Alignment:
Q  157 gtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    ||||||||||| ||||||||||  ||  ||| ||||||| ||| | | |||| ||||| ||||| |||||||||||||||||| ||||    
T  23141742 gtgggcaacaactttagtgcccgcccctatatcctatgggcaccttactgtctataccggcacctattacccgcattttaactatgaa 23141655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 6310974 - 6311056
Alignment:
Q  162 caacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    |||||| |||| ||||| |||||||||||||||||||  |||||| ||||| ||||||  |||||  ||| ||||||| ||||    
T  6310974 caacaactttactgcccatcctcataccctatggacatctaagtgcccatatccgcacttattacatgcactttaactatgaa 6311056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 73; Significance: 6e-33; HSPs: 2)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 146 - 335
Target Start/End: Original strand, 20011 - 20199
Alignment:
Q  146 tccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaac 245  Q
    |||||||| || |||||||||  |||||||||||||| |||| | |||||| |||||||||||||||||||||||||||||||||||||||||  ||||     
T  20011 tccgtaccctcttgggcaacatctttagtgcccttccccatatcttatggatacttaagtgtccatacccgcacccattacccgcattttaaccatgaaa 20110  T
Q  246 aaacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtatttaa 335  Q
    | |||||          |||||||||||||||| ||| | ||| ||||||| ||||||||| ||||||||||| |||| |||||||||||    
T  20111 agacaattaaaaac-gtcacaattgaaataaaattatgatccaaaaaattttaaatcaactaataaaatagtatgaattgtagtatttaa 20199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 393 - 495
Target Start/End: Original strand, 20250 - 20353
Alignment:
Q  393 actttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaagttgtattaagatgttttagcg 491  Q
    ||||||||| |||||||||| |||||||||  |||| || ||||| |||||||||||| ||||||||||||| ||||||||| |||||| |||||||| |    
T  20250 actttacatcaattatacgttaaaaagttgcggttgcatattaaagtcataataaattgttactaaagttttaattaagttgcattaagttgttttaggg 20349  T
Q  492 ttag 495  Q
    ||||    
T  20350 ttag 20353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 2e-30; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 150 - 335
Target Start/End: Complemental strand, 6338057 - 6337872
Alignment:
Q  150 taccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaacaaac 249  Q
    |||| ||||||||||||| |||||||||||||| |||||||||||| ||| |||| |  |||||||||||| |||||||||| |||||   |||| | ||    
T  6338057 taccctcgtgggcaacaactttagtgcccttccccataccctatgggcacctaagagctcatacccgcaccaattacccgcagtttaatactgaaaagac 6337958  T
Q  250 aatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtatttaa 335  Q
    |||        ||||||| ||||||| || ||| | ||| ||||||||||||||||||||||||||||| |||| |||||||||||    
T  6337957 aataaaaaagcaccacaactgaaatacaattatgatccagaaaatttcaaatcaactcataaaatagtatgaatggtagtatttaa 6337872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 9062273 - 9062181
Alignment:
Q  144 tgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcatttta 236  Q
    |||||||||| |||||| |||||| |||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||| ||||    
T  9062273 tgtccgtaccctcgtggacaacaactttagtgcccttccccataccctatgggcacttaagtgcccatacccgcacccattacccgcacttta 9062181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 144 - 251
Target Start/End: Complemental strand, 20691716 - 20691609
Alignment:
Q  144 tgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtga 243  Q
    |||||||||| ||||||||||||| |||||| ||||||| ||||||||||||  || |||||| |||||||||||||||||||||||| ||||||| |||    
T  20691716 tgtccgtaccctcgtgggcaacaactttagtccccttccccataccctatgggtacctaagtgcccatacccgcacccattacccgcactttaactatga 20691617  T
Q  244 acaaacaa 251  Q
    | ||||||    
T  20691616 aaaaacaa 20691609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 123 - 334
Target Start/End: Original strand, 6938006 - 6938212
Alignment:
Q  123 catacccgcgtttgtaaaaaatgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcaccca 222  Q
    ||||||||| |||||||||| |  |||||||  |||||||||||| |||||||||||||| ||||||||||||  || |||||| ||||||||||||||     
T  6938006 catacccgcatttgtaaaaattacccgtacccccgtgggcaacaactttagtgcccttccccataccctatgggtacctaagtgcccatacccgcaccc- 6938104  T
Q  223 ttacccgcattttaactgtgaacaaacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaa 322  Q
      ||||||| ||||||| |||| | |||||       |  ||||||||||| |||||||| ||  | | | ||| |||| ||||||||||||| ||||||    
T  6938105 --acccgcactttaactatgaaaagacaataaaaacat--cacaattgaaacaaaactatgacataaatattttaaaattaactcataaaataatacgaa 6938200  T
Q  323 tcgtagtattta 334  Q
    ||||||||||||    
T  6938201 tcgtagtattta 6938212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 147 - 334
Target Start/End: Complemental strand, 24447249 - 24447063
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| |||| ||||||||| |||||||||||| ||||||||||  ||||||| ||||||||||||||| |||  || |||| |    
T  24447249 ccgtaccctcgtgggcaacaactttaatgcccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcactttctctatgaaaa 24447150  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
     |||||        | |||||||||||||||||||| | ||| ||   || ||||||||| |||||||| ||||||| ||||||||||    
T  24447149 gacaataaaaaac-atcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaataatacgaattgtagtattta 24447063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 150 - 251
Target Start/End: Complemental strand, 1329683 - 1329582
Alignment:
Q  150 taccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaacaaac 249  Q
    |||| ||||||||||||| |||||| ||||||| ||||||||||||| || |||||| |||||||| ||||||||||||||| ||||||| |||| ||||    
T  1329683 taccctcgtgggcaacaactttagtccccttccccataccctatggatacctaagtgcccatacccacacccattacccgcactttaactatgaaaaaac 1329584  T
Q  250 aa 251  Q
    ||    
T  1329583 aa 1329582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 147 - 334
Target Start/End: Complemental strand, 1221838 - 1221652
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| | |||| |||||| |||| ||||||||| |||||||||||| ||||||||||  ||||||| ||||||||||||||| |||  || |||| |    
T  1221838 ccgtacccttgtggacaacaactttaatgcccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcactttctctatgaaaa 1221739  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
     |||||       || |||||||||||||||||||| | ||| ||   || ||||||||| |||||||| ||||||| ||||||||||    
T  1221738 gacaat-aaaaaatatcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaataatacgaattgtagtattta 1221652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 606 - 753
Target Start/End: Complemental strand, 9061833 - 9061689
Alignment:
Q  606 ccatagccgtgtccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccatagcggatact 705  Q
    ||||| ||||| ||||||||||  |||||||||||||||||||||||||| || |  |||||||||||||| | ||||||| ||| ||||||||| || |    
T  9061833 ccatacccgtgcccatacccatataaatttgcgggtaattacccataccc-aaacccggacccatgaaagcggggttttaccctacccatagcgggta-t 9061736  T
Q  706 tttttgcggatccccattggggtctgggtacaattgtcatccctattc 753  Q
    ||||||||| | |||| | || ||||||| |||||| |||||||||||    
T  9061735 tttttgcgggtgccca-taggatctgggtccaattgccatccctattc 9061689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 144 - 239
Target Start/End: Complemental strand, 13534319 - 13534224
Alignment:
Q  144 tgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaact 239  Q
    |||||||||| ||||||||||||| |||||| || |||| |||||| |||||  ||||||||  |||||||||||||||||||||||| |||||||    
T  13534319 tgtccgtaccctcgtgggcaacaactttagtcccattccccataccatatgggtacttaagtacccatacccgcacccattacccgcactttaact 13534224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 147 - 239
Target Start/End: Original strand, 33328574 - 33328666
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaact 239  Q
    ||||||| | ||||||||||| |||||| ||||||| ||||||||||||  ||||||||  |||||||||||| ||||||||||| |||||||    
T  33328574 ccgtacccttgtgggcaacaactttagtccccttccccataccctatgggtacttaagtaaccatacccgcactcattacccgcactttaact 33328666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 6799323 - 6799249
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaa 469  Q
    |||||| | |||||||| ||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||    
T  6799323 ttacatcagttatacgttaaaaagttgtagttgcatgttaaaatcataataaattgttactaaagtttttattaa 6799249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 9062030 - 9061956
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaa 469  Q
    |||||| | |||||||| ||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||    
T  9062030 ttacatcagttatacgttaaaaagttgtagttgcatgttaaaatcataataaattgttactaaagtttttattaa 9061956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 148 - 228
Target Start/End: Original strand, 6337220 - 6337300
Alignment:
Q  148 cgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattaccc 228  Q
    |||||| ||||||||||||| ||||||||| |||| ||||||||||||  || |||||| ||||||||||||| |||||||    
T  6337220 cgtaccctcgtgggcaacaactttagtgccattccccataccctatgggtacctaagtgcccatacccgcacctattaccc 6337300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 147 - 219
Target Start/End: Complemental strand, 6799550 - 6799478
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcac 219  Q
    ||||||| ||||||||||||  |||||||||||||| |||||| ||||| ||||||| |||||||||||||||    
T  6799550 ccgtaccctcgtgggcaacatctttagtgcccttccccataccttatgggcacttaaatgtccatacccgcac 6799478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 140 - 236
Target Start/End: Original strand, 28769857 - 28769953
Alignment:
Q  140 aaaatgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcatttta 236  Q
    ||||| |||||||| |  |||||||||| ||||||| | |||| |||| |||||||  || ||||||||||||||||||||||||||||||| ||||    
T  28769857 aaaatatccgtacccttatgggcaacaactttagtgtcattccccatatcctatgggtacctaagtgtccatacccgcacccattacccgcacttta 28769953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 251
Target Start/End: Original strand, 31070782 - 31070886
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| |||||  |||||| |||||| ||||| |  || ||||||||  || |||||| |||||||||||||||||||||||| ||||||| |||| |    
T  31070782 ccgtaccctcgtgaacaacaactttagtcccctttccaatcccctatgggtacctaagtgcccatacccgcacccattacccgcactttaactatgaaaa 31070881  T
Q  247 aacaa 251  Q
    |||||    
T  31070882 aacaa 31070886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 239
Target Start/End: Original strand, 33331586 - 33331678
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaact 239  Q
    ||||||| | ||||||||||| |||||| ||||||| ||||||||||||  |||||| |   ||||||||||| ||||||||||| |||||||    
T  33331586 ccgtacccttgtgggcaacaactttagtccccttccccataccctatgggtacttaattactcatacccgcactcattacccgcactttaact 33331678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 220
Target Start/End: Complemental strand, 33960295 - 33960189
Alignment:
Q  113 tacccatcttcatacccgcgtttgtaaaaaatgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccata 212  Q
    |||||||| |||||| | | |||||||||||||| |||| | ||||||||||||| |||| ||  ||||| |||||||||||| ||| |||||| |||||    
T  33960295 tacccatcctcatactctcatttgtaaaaaatgttcgtatcctcgtgggcaacaactttaatgttcttcc-cataccctatgggcacctaagtgcccata 33960197  T
Q  213 cccgcacc 220  Q
    ||| ||||    
T  33960196 cccacacc 33960189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 244
Target Start/End: Original strand, 12429405 - 12429506
Alignment:
Q  143 atgtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtg 242  Q
    ||||| ||||| ||||||||||| | ||||||||| |||  |||| |||||||  |  ||||||||||||||| ||| ||||||||||| ||||||| ||    
T  12429405 atgtctgtaccctcgtgggcaactactttagtgcctttctccatatcctatggttatctaagtgtccatacccacactcattacccgcactttaactatg 12429504  T
Q  243 aa 244  Q
    ||    
T  12429505 aa 12429506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 123 - 316
Target Start/End: Original strand, 10499127 - 10499322
Alignment:
Q  123 catacccgcgtttgtaaaaaat--gtccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacc 220  Q
    |||| ||||||||||||||||   ||||||| ||   |||||||||| |||| ||||||||| |||| ||||||| ||| |||||   |||| | |||||    
T  10499127 catatccgcgtttgtaaaaaaaaagtccgtatctgaatgggcaacaactttactgcccttccccatatcctatgggcacctaagttctcatatcagcacc 10499226  T
Q  221 cattacccgcattttaactgtgaacaaacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatag 316  Q
    |||||| |||| ||||||| |||| | |||||       ||   || |||||||||||| || | ||| |||| |||||||||| |||||||||||    
T  10499227 cattacacgcactttaactatgaaaagacaataaaaaaatattgcagttgaaataaaaccatgatccaaaaaaattcaaatcaattcataaaatag 10499322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 263 - 334
Target Start/End: Complemental strand, 33960163 - 33960092
Alignment:
Q  263 cacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
    |||||||||||||||||||| |  || ||   || ||||||||| |||||||||||||||||||||||||||    
T  33960163 cacaattgaaataaaactatgattcaaaattatttaaatcaactaataaaatagtacgaatcgtagtattta 33960092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 612 - 649
Target Start/End: Complemental strand, 1221429 - 1221392
Alignment:
Q  612 ccgtgtccatacccattcaaatttgcgggtaattaccc 649  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  1221429 ccgtgtccatacccattaaaatttgcgggtaattaccc 1221392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 612 - 649
Target Start/End: Complemental strand, 24446836 - 24446799
Alignment:
Q  612 ccgtgtccatacccattcaaatttgcgggtaattaccc 649  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  24446836 ccgtgtccatacccattaaaatttgcgggtaattaccc 24446799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 59; Significance: 1e-24; HSPs: 8)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 395 - 496
Target Start/End: Complemental strand, 12975 - 12873
Alignment:
Q  395 tttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaagttgtattaagatgttttagcgtt 493  Q
    ||||||| ||||||| || ||||||||| ||||| |||||||| |||||||||||| ||||||||||||||||||||||| |||||| |||||||| |||    
T  12975 tttacatcaattatatgttaaaaagttgcagttgcatgttaaagtcataataaattgttactaaagtttttattaagttgcattaagctgttttagggtt 12876  T
Q  494 agg 496  Q
    |||    
T  12875 agg 12873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 395 - 496
Target Start/End: Complemental strand, 21810 - 21708
Alignment:
Q  395 tttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaagttgtattaagatgttttagcgtt 493  Q
    ||||||| ||||||| || ||||||||| ||||| |||||||| |||||||||||| ||||||||||||||||||||||| |||||| |||||||| |||    
T  21810 tttacatcaattatatgttaaaaagttgcagttgcatgttaaagtcataataaattgttactaaagtttttattaagttgcattaagctgttttagggtt 21711  T
Q  494 agg 496  Q
    |||    
T  21710 agg 21708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 147 - 219
Target Start/End: Complemental strand, 13201 - 13129
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcac 219  Q
    ||||||| ||||||||||||| ||||||||| |||| ||||||||||||  ||||||||| ||||||||||||    
T  13201 ccgtaccctcgtgggcaacaactttagtgcctttccccataccctatgggtacttaagtgcccatacccgcac 13129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 147 - 219
Target Start/End: Complemental strand, 22036 - 21964
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcac 219  Q
    ||||||| ||||||||||||| ||||||||| |||| ||||||||||||  ||||||||| ||||||||||||    
T  22036 ccgtaccctcgtgggcaacaactttagtgcctttccccataccctatgggtacttaagtgcccatacccgcac 21964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 618 - 709
Target Start/End: Complemental strand, 12761 - 12671
Alignment:
Q  618 ccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccatagcggatacttttt 709  Q
    ||||||||||| ||||||| |||||||||||||||||| || |  |||||||||||||| | ||||||| ||| ||||||||| || |||||    
T  12761 ccatacccatttaaatttgtgggtaattacccataccc-aaacccggacccatgaaagcggggttttaccctacccatagcgggtatttttt 12671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 618 - 709
Target Start/End: Complemental strand, 21596 - 21506
Alignment:
Q  618 ccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccatagcggatacttttt 709  Q
    ||||||||||| ||||||| |||||||||||||||||| || |  |||||||||||||| | ||||||| ||| ||||||||| || |||||    
T  21596 ccatacccatttaaatttgtgggtaattacccataccc-aaacccggacccatgaaagcggggttttaccctacccatagcgggtatttttt 21506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 264 - 334
Target Start/End: Complemental strand, 13098 - 13028
Alignment:
Q  264 acaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
    ||||||||||||||| ||| | ||| ||||||||||||||||| |||||||||||  | ||||||||||||    
T  13098 acaattgaaataaaattatgatccaaaaaatttcaaatcaactaataaaatagtataagtcgtagtattta 13028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 264 - 334
Target Start/End: Complemental strand, 21933 - 21863
Alignment:
Q  264 acaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
    ||||||||||||||| ||| | ||| ||||||||||||||||| |||||||||||  | ||||||||||||    
T  21933 acaattgaaataaaattatgatccaaaaaatttcaaatcaactaataaaatagtataagtcgtagtattta 21863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 147 - 334
Target Start/End: Original strand, 26614 - 26800
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaaca 246  Q
    ||||||| ||||||||||||| |||| ||||||||| |||||||||||| ||||||||||  ||||||| ||||||||||||||| |||  || |||  |    
T  26614 ccgtaccctcgtgggcaacaactttaatgcccttccccataccctatgggcacttaagtgctcatacccccacccattacccgcactttctctatgacaa 26713  T
Q  247 aacaatnnnnnnntaccacaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
     |||||       || |||||||||||||||||||| | ||| ||   || ||||||||| |||||||| || |||| ||||||||||    
T  26714 gacaat-aaaaaatatcacaattgaaataaaactatgatccaaaattatttaaatcaactaataaaataatatgaattgtagtattta 26800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 612 - 649
Target Start/End: Original strand, 27027 - 27064
Alignment:
Q  612 ccgtgtccatacccattcaaatttgcgggtaattaccc 649  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  27027 ccgtatccatacccattaaaatttgcgggtaattaccc 27064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 47; Significance: 2e-17; HSPs: 3)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 618 - 756
Target Start/End: Complemental strand, 109688 - 109553
Alignment:
Q  618 ccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccatagcggatacttttttgcggatc 717  Q
    ||||||||||  |||||||||||||||||||||||||| ||||  |||||||||||||| | |||||||  || |||||||||||| |||||| |||||     
T  109688 ccatacccatataaatttgcgggtaattacccataccc-aagcccggacccatgaaagcggggttttaccatacccatagcggata-ttttttacggatg 109591  T
Q  718 cccattggggtctgggtacaattgtcatccctattcgtt 756  Q
    |||| | || || |||| |||||| |||||||| |||||    
T  109590 ccca-taggatccgggtccaattgccatccctaatcgtt 109553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 147 - 236
Target Start/End: Complemental strand, 110134 - 110045
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcatttta 236  Q
    ||||| ||||||||||||||| |||||||||||||| |||| |||||||  |||||||||  ||||||| |||| |||||||||| ||||    
T  110134 ccgtatcttcgtgggcaacaactttagtgcccttccccatatcctatgggtacttaagtgctcataccctcacctattacccgcacttta 110045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 109893 - 109819
Alignment:
Q  396 ttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaa 469  Q
    |||||| | |||||||| |||||||| |||||| |||||||| |||||||||||| |||||||||||||||||||    
T  109893 ttacatcagttatacgttaaaaagttctagttgcatgttaaaatcataataaattgttactaaagtttttattaa 109819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 46; Significance: 8e-17; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 147 - 244
Target Start/End: Complemental strand, 240595 - 240498
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    ||||||| |||||||||||||||||||| ||||||| |||| |||||||  || | |||| ||||||||||| |||||| ||||| ||||||| ||||    
T  240595 ccgtaccctcgtgggcaacaattttagtccccttccccatatcctatgggtacctcagtgcccatacccgcatccattatccgcactttaactatgaa 240498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 222082 - 222000
Alignment:
Q  155 tcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaa 237  Q
    ||||||| ||||| ||||||| | |||  |||||| ||||||||| ||||||  |||||||| | |||||||||||| |||||    
T  222082 tcgtgggtaacaactttagtgtcattctccataccttatggacacctaagtgctcatacccgtatccattacccgcactttaa 222000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0938 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 4)
Name: scaffold0938
Description:

Target: scaffold0938; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 264 - 334
Target Start/End: Original strand, 561 - 631
Alignment:
Q  264 acaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
    ||||||||||||||| ||| | ||| ||||||||||||||||| |||||||||||  ||||||||||||||    
T  561 acaattgaaataaaattatgatccaaaaaatttcaaatcaactaataaaatagtataaatcgtagtattta 631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0938; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 395 - 496
Target Start/End: Original strand, 684 - 786
Alignment:
Q  395 tttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaagttgtattaagatgttttagcgtt 493  Q
    ||||||| |||||||||| ||||||||  ||||| |||||||| ||||||| || | |||||||||||||||| |||||| |||||| | |||||| |||    
T  684 tttacatcaattatacgttaaaaagttccagttgcatgttaaagtcataatgaactgttactaaagtttttataaagttgcattaagctattttagggtt 783  T
Q  494 agg 496  Q
    |||    
T  784 agg 786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0938; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 238
Target Start/End: Original strand, 450 - 531
Alignment:
Q  157 gtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaac 238  Q
    ||||||||||| |||| ||   |||| ||||||||||||  ||||||||| |||||||||||||||||||||||| ||||||    
T  450 gtgggcaacaactttattgtttttccacataccctatgggtacttaagtgcccatacccgcacccattacccgcactttaac 531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0938; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 612 - 734
Target Start/End: Original strand, 908 - 1027
Alignment:
Q  612 ccgtgtccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccatagcggatacttttttg 711  Q
    ||||| ||||| ||||| ||||||||||||||||| |||||||| |  | | |||||| |||||| | ||||||| ||| ||||||||| || |||||||    
T  908 ccgtgcccatatccatttaaatttgcgggtaattatccatacccaattcct-gacccaggaaagcggggttttaccctacccatagcgggta-ttttttg 1005  T
Q  712 cggatccccattggggtctgggt 734  Q
    | | | |||| ||||||||||||    
T  1006 caggtgccca-tggggtctgggt 1027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 8)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 395 - 496
Target Start/End: Complemental strand, 23768 - 23666
Alignment:
Q  395 tttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaagttgtattaagatgttttagcgtt 493  Q
    ||||||| |||||||||| ||||||||  ||||| |||||||| ||||||| || | |||||||||||||||| |||||| |||||| | |||||| |||    
T  23768 tttacatcaattatacgttaaaaagttccagttgcatgttaaagtcataatgaactgttactaaagtttttataaagttgcattaagctattttagggtt 23669  T
Q  494 agg 496  Q
    |||    
T  23668 agg 23666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 264 - 334
Target Start/End: Complemental strand, 23891 - 23821
Alignment:
Q  264 acaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
    ||||||||||||||| ||| | ||| ||||||||||||||||| |||||||||||  ||||||||||||||    
T  23891 acaattgaaataaaattatgatccaaaaaatttcaaatcaactaataaaatagtataaatcgtagtattta 23821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 395 - 496
Target Start/End: Complemental strand, 33936 - 33834
Alignment:
Q  395 tttacataaattatacgtcaaaaagttgtagttgtatgttaaa-tcataataaattattactaaagtttttattaagttgtattaagatgttttagcgtt 493  Q
    ||||||| |||||||||| ||||||||  ||||| |||||||| ||||||| || | |||||||||||||||| |||||| |||||| | |||||| |||    
T  33936 tttacatcaattatacgttaaaaagttccagttgcatgttaaagtcataatgaactgttactaaagtttttataaagttgcattaagctattttagggtt 33837  T
Q  494 agg 496  Q
    |||    
T  33836 agg 33834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 264 - 334
Target Start/End: Complemental strand, 34059 - 33989
Alignment:
Q  264 acaattgaaataaaactataacccataaaatttcaaatcaactcataaaatagtacgaatcgtagtattta 334  Q
    ||||||||||||||| ||| | ||| ||||||||||||||||| |||||||||||  ||||||||||||||    
T  34059 acaattgaaataaaattatgatccaaaaaatttcaaatcaactaataaaatagtataaatcgtagtattta 33989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 238
Target Start/End: Complemental strand, 24002 - 23921
Alignment:
Q  157 gtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaac 238  Q
    ||||||||||| |||| ||   |||| ||||||||||||  ||||||||| |||||||||||||||||||||||| ||||||    
T  24002 gtgggcaacaactttattgtttttccacataccctatgggtacttaagtgcccatacccgcacccattacccgcactttaac 23921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 238
Target Start/End: Complemental strand, 34170 - 34089
Alignment:
Q  157 gtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaac 238  Q
    ||||||||||| |||| ||   |||| ||||||||||||  ||||||||| |||||||||||||||||||||||| ||||||    
T  34170 gtgggcaacaactttattgtttttccacataccctatgggtacttaagtgcccatacccgcacccattacccgcactttaac 34089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 612 - 734
Target Start/End: Complemental strand, 23544 - 23425
Alignment:
Q  612 ccgtgtccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccatagcggatacttttttg 711  Q
    ||||| ||||| ||||| ||||||||||||||||| |||||||| |  | | |||||| |||||| | ||||||| ||| ||||||||| || |||||||    
T  23544 ccgtgcccatatccatttaaatttgcgggtaattatccatacccaattcct-gacccaggaaagcggggttttaccctacccatagcgggta-ttttttg 23447  T
Q  712 cggatccccattggggtctgggt 734  Q
    | | | |||| ||||||||||||    
T  23446 caggtgccca-tggggtctgggt 23425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 612 - 734
Target Start/End: Complemental strand, 33712 - 33593
Alignment:
Q  612 ccgtgtccatacccattcaaatttgcgggtaattacccataccctaagcatggacccatgaaagcagtgttttacactatccatagcggatacttttttg 711  Q
    ||||| ||||| ||||| ||||||||||||||||| |||||||| |  | | |||||| |||||| | ||||||| ||| ||||||||| || |||||||    
T  33712 ccgtgcccatatccatttaaatttgcgggtaattatccatacccaattcct-gacccaggaaagcggggttttaccctacccatagcgggta-ttttttg 33615  T
Q  712 cggatccccattggggtctgggt 734  Q
    | | | |||| ||||||||||||    
T  33614 caggtgccca-tggggtctgggt 33593  T

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Target: scaffold0602 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0602
Description:

Target: scaffold0602; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 294 - 332
Target Start/End: Original strand, 5132 - 5170
Alignment:
Q  294 tttcaaatcaactcataaaatagtacgaatcgtagtatt 332  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5132 tttcaaatcaactcataaaatagtacgaatcgtagtatt 5170  T

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Target: scaffold0164 (Bit Score: 36; Significance: 0.00000000007; HSPs: 2)
Name: scaffold0164
Description:

Target: scaffold0164; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 147 - 214
Target Start/End: Complemental strand, 7225 - 7158
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacc 214  Q
    ||||||| ||||||||||||| |||||| ||||||||||||||||| ||  || |||||| |||||||    
T  7225 ccgtaccctcgtgggcaacaactttagtccccttcctcataccctaagggtacctaagtgcccatacc 7158  T

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Target: scaffold0164; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 147 - 214
Target Start/End: Complemental strand, 15106 - 15039
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacc 214  Q
    ||||||| ||||||||||||| |||||| ||||||||||||||||| ||  || |||||| |||||||    
T  15106 ccgtaccctcgtgggcaacaactttagtccccttcctcataccctaagggtacctaagtgcccatacc 15039  T

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Target: scaffold0312 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 244
Target Start/End: Complemental strand, 6000 - 5903
Alignment:
Q  147 ccgtaccttcgtgggcaacaattttagtgcccttcctcataccctatggacacttaagtgtccatacccgcacccattacccgcattttaactgtgaa 244  Q
    ||||||| ||||||||||||| |||||  |||||||  ||| |||  ||  ||||||||| ||||||| ||||||||||||| || ||||||| ||||    
T  6000 ccgtaccctcgtgggcaacaactttagcccccttcccaatatcctgcgggtacttaagtgcccatacctgcacccattacccacactttaactatgaa 5903  T

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