View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4759_high_10 (Length: 305)

Name: NF4759_high_10
Description: NF4759
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4759_high_10
NF4759_high_10
[»] chr8 (15 HSPs)
chr8 (27-260)||(43270778-43271013)
chr8 (24-260)||(17699806-17700044)
chr8 (24-239)||(20824646-20824863)
chr8 (24-260)||(42177128-42177363)
chr8 (24-260)||(13879063-13879301)
chr8 (24-196)||(25090779-25090951)
chr8 (24-179)||(8300212-8300367)
chr8 (121-260)||(2170662-2170803)
chr8 (24-196)||(9922993-9923165)
chr8 (24-164)||(32266986-32267126)
chr8 (24-112)||(172615-172703)
chr8 (24-160)||(41664944-41665080)
chr8 (24-179)||(7924795-7924950)
chr8 (24-71)||(38046875-38046922)
chr8 (24-82)||(36157660-36157718)
[»] chr2 (10 HSPs)
chr2 (24-260)||(14440072-14440308)
chr2 (24-260)||(12645862-12646100)
chr2 (24-237)||(28253069-28253284)
chr2 (101-260)||(40176994-40177155)
chr2 (24-146)||(33515783-33515905)
chr2 (24-67)||(1380603-1380646)
chr2 (24-63)||(37445618-37445657)
chr2 (24-82)||(15018183-15018241)
chr2 (24-82)||(22725015-22725073)
chr2 (31-75)||(35488350-35488394)
[»] chr5 (16 HSPs)
chr5 (46-260)||(10777110-10777326)
chr5 (24-252)||(25857000-25857230)
chr5 (24-260)||(8299758-8299996)
chr5 (24-260)||(27795809-27796048)
chr5 (24-196)||(31641903-31642075)
chr5 (24-179)||(30731890-30732045)
chr5 (24-179)||(42514129-42514284)
chr5 (24-164)||(23238807-23238947)
chr5 (24-196)||(28535251-28535423)
chr5 (24-179)||(35983367-35983522)
chr5 (24-197)||(12825590-12825763)
chr5 (24-164)||(27116749-27116889)
chr5 (24-134)||(27165526-27165636)
chr5 (24-189)||(42928530-42928695)
chr5 (24-198)||(33170048-33170222)
chr5 (24-63)||(22094826-22094865)
[»] chr6 (17 HSPs)
chr6 (24-255)||(10576826-10577059)
chr6 (24-260)||(17605910-17606148)
chr6 (32-260)||(20882617-20882847)
chr6 (24-260)||(21629683-21629921)
chr6 (60-260)||(17573268-17573470)
chr6 (24-237)||(14372567-14372782)
chr6 (24-143)||(2554051-2554170)
chr6 (24-134)||(24767005-24767115)
chr6 (97-237)||(15958462-15958604)
chr6 (24-198)||(13938109-13938283)
chr6 (41-180)||(33185843-33185982)
chr6 (24-114)||(18682150-18682240)
chr6 (26-68)||(10922073-10922115)
chr6 (24-63)||(5085602-5085641)
chr6 (24-82)||(17078766-17078824)
chr6 (24-82)||(18051025-18051083)
chr6 (24-65)||(17577294-17577335)
[»] chr7 (12 HSPs)
chr7 (24-260)||(37255084-37255322)
chr7 (24-260)||(31422928-31423166)
chr7 (24-179)||(4937704-4937859)
chr7 (24-162)||(11276824-11276962)
chr7 (24-179)||(17721044-17721199)
chr7 (24-134)||(235014-235124)
chr7 (24-164)||(29968398-29968538)
chr7 (92-260)||(25619790-25619961)
chr7 (32-112)||(47877459-47877539)
chr7 (24-68)||(36364036-36364080)
chr7 (24-80)||(34232207-34232263)
chr7 (24-68)||(39931172-39931216)
[»] chr3 (14 HSPs)
chr3 (24-257)||(19891006-19891241)
chr3 (24-260)||(12341831-12342069)
chr3 (24-260)||(48569615-48569853)
chr3 (24-260)||(15312907-15313146)
chr3 (59-260)||(17097488-17097691)
chr3 (24-180)||(2364685-2364841)
chr3 (24-179)||(10323147-10323302)
chr3 (24-216)||(16179317-16179511)
chr3 (106-260)||(29523379-29523535)
chr3 (24-179)||(19919805-19919960)
chr3 (24-197)||(34332391-34332564)
chr3 (24-114)||(962739-962829)
chr3 (24-114)||(3141325-3141415)
chr3 (23-63)||(43121242-43121282)
[»] chr4 (16 HSPs)
chr4 (43-260)||(2821629-2821848)
chr4 (24-260)||(48312421-48312658)
chr4 (24-260)||(54482735-54482973)
chr4 (24-260)||(55725282-55725520)
chr4 (24-216)||(5789668-5789862)
chr4 (24-180)||(11586774-11586930)
chr4 (24-179)||(23642167-23642322)
chr4 (24-179)||(47419213-47419368)
chr4 (24-164)||(19755691-19755831)
chr4 (24-164)||(19783975-19784115)
chr4 (24-131)||(23647825-23647932)
chr4 (27-164)||(1828119-1828256)
chr4 (27-164)||(15740645-15740781)
chr4 (24-104)||(19735311-19735391)
chr4 (24-80)||(42778746-42778802)
chr4 (24-63)||(23657822-23657861)
[»] chr1 (6 HSPs)
chr1 (50-260)||(43388693-43388903)
chr1 (24-237)||(47622653-47622868)
chr1 (24-179)||(6051012-6051167)
chr1 (24-179)||(35541458-35541613)
chr1 (48-197)||(11908705-11908854)
chr1 (31-83)||(17827805-17827857)
[»] scaffold0034 (1 HSPs)
scaffold0034 (24-179)||(105419-105574)
[»] scaffold0472 (1 HSPs)
scaffold0472 (24-176)||(3664-3816)
[»] scaffold1350 (1 HSPs)
scaffold1350 (24-131)||(1-108)


Alignment Details
Target: chr8 (Bit Score: 209; Significance: 1e-114; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 27 - 260
Target Start/End: Complemental strand, 43271013 - 43270778
Alignment:
Q  27 ggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgttagg 126  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  43271013 ggatgggggccggagttgttcttcgtggtggagggagatagttaggattagagatgggataggcgagggtggggagggctggtttgcaggttgtgttagg 43270914  T
Q  127 aggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgtgt--gttttagacggctatatgatttagctc 224  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||     
T  43270913 aggagggtaggggatggagccgataccgatttttggccagactgttggtgtggtagtgttccgttgtgtgtgcgttttagacggctatatgatttagctg 43270814  T
Q  225 tcaataaagtaattatggtgaggaacatgttcttgt 260  Q
    ||||||||||||||||||||||||||||||||||||    
T  43270813 tcaataaagtaattatggtgaggaacatgttcttgt 43270778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 24 - 260
Target Start/End: Complemental strand, 17700044 - 17699806
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  17700044 ggaggatgggggccggagttgctcttcgcggtggagggagatagttaggattagagatgggataggtgagggtggggagggctggtttgcaggttgtgtt 17699945  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgtgt--gttttagacggctatatgatttag 221  Q
    ||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||  ||||||| ||||| |||||||||     
T  17699944 aggaggagggtgggggatggagccgatactgatttttggcgagattgttggtgtggtagtgttccgttgtgtgtgcgttttaggcggctttatgatttaa 17699845  T
Q  222 ctctcaataaagtaattatggtgaggaacatgttcttgt 260  Q
    || |||||||| | |||  |||| |||||||||| ||||    
T  17699844 ctgtcaataaaattatttcggtgcggaacatgtttttgt 17699806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 24 - 239
Target Start/End: Complemental strand, 20824863 - 20824646
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| |||||||||| ||||||||||||||| || ||||||||||||| |||||| ||||||||||||||||||||| |||||||||||    
T  20824863 ggaggatgggggccggagttgttctttgtggtggagggagattgtgaggattagagatgggataggtgagggtggggagggctggttttcaggttgtgtt 20824764  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgtgt--gttttagacggctatatgatttag 221  Q
    ||||||||||| ||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||  ||||||| ||||| ||||||||||    
T  20824763 aggaggagggtgggggatggagctgataccgatttttggcgtgattgttggtgtggtagtgttccgttgtgtgtgcgttttaggcggctttatgatttag 20824664  T
Q  222 ctctcaataaagtaatta 239  Q
    || |||||||||| ||||    
T  20824663 ctgtcaataaagttatta 20824646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 24 - 260
Target Start/End: Original strand, 42177128 - 42177363
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    |||||||| |||||||||    
T  42177128 ggaggatgcgggccgaagttgttcttcgtggtggagggagatagtcaggattagagatgggataggcgagggtgggga---ttggtttgcgggttgtgtt 42177224  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgt--gtgttttagacggctatatgatttag 221  Q
    ||||||||||| |||||||| ||||| | ||||||||||||||| |||||||||||||||||| || |||||  | | ||||| |||||||||||| |||    
T  42177225 aggaggagggtgggggatggggccgaaatcgatttttggcgagattgttggtgtggtagtgtttcgctgtgtgagcgatttaggcggctatatgatctag 42177324  T
Q  222 ctctcaataaagtaattatggtgaggaacatgttcttgt 260  Q
    ||  |||||||||||| | ||||||||||||||||||||    
T  42177325 ctgccaataaagtaatcacggtgaggaacatgttcttgt 42177363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 24 - 260
Target Start/End: Original strand, 13879063 - 13879301
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||  ||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||| ||||| |||||||  | |||||||    
T  13879063 ggaggatgggggccagagttgttcttcgtggtggagggagatagtcaagattagagatgggataggcgagggtggagagggttggtttgtggattgtgtt 13879162  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgt--gtgttttagacggctatatgatttag 221  Q
    ||||||||||| ||||||| ||| ||||| |||||||||||||| |||||||||||||||||||||||||||  | | ||||| || || ||||| ||||    
T  13879163 aggaggagggtgggggatgaagctgatactgatttttggcgagattgttggtgtggtagtgttccgttgtgtgagcgctttaggcgtctttatgacttag 13879262  T
Q  222 ctctcaataaagtaattatggtgaggaacatgttcttgt 260  Q
    || || |||||  ||| | ||||||||||||||||||||    
T  13879263 ctatcgataaatcaatcacggtgaggaacatgttcttgt 13879301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 24 - 196
Target Start/End: Complemental strand, 25090951 - 25090779
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||  |||| |||||| | | |||||||    
T  25090951 ggaggatgggggccggagctgttcttcgtggtggagggagatagtcaggattagagatgggataggcgagggtggaaagggttggtttacggattgtgtt 25090852  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgtg 196  Q
    ||||||||||| ||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  25090851 aggaggagggtgggggatggagcagatactgatttttggcgagattgttggtgtggtagtgttccgttgtgtg 25090779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 24 - 179
Target Start/End: Complemental strand, 8300367 - 8300212
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||| |||||| |||||||| ||||| |||||||    |||||||    
T  8300367 ggaggatgggggccggagttgttcttcgtggtggagggagatcgtgaggattagagatgggataggtgagggtggcgagggatggtttgggtcttgtgtt 8300268  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtgg 179  Q
    |||||||| || || ||||| || ||||| ||||||||||| || |||||||||||    
T  8300267 aggaggagagtgggagatggggcagatactgatttttggcgtgattgttggtgtgg 8300212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 121 - 260
Target Start/End: Complemental strand, 2170803 - 2170662
Alignment:
Q  121 gttaggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgt--tgtgtgtgttttagacggctatatgatt 218  Q
    |||||||||||||| |||||| ||| |||||||||||||| |||||| ||||||||||||||||||||||  |||||| ||||||| ||||| |||||||    
T  2170803 gttaggaggagggtgggggatagagtcgataccgatttttagcgagattgttggtgtggtagtgttccgttatgtgtgcgttttaggcggctttatgatt 2170704  T
Q  219 tagctctcaataaagtaattatggtgaggaacatgttcttgt 260  Q
    || || ||||||||||||||| |||| |||||||||| ||||    
T  2170703 taactgtcaataaagtaattacggtgcggaacatgtttttgt 2170662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 24 - 196
Target Start/End: Complemental strand, 9923165 - 9922993
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||||| ||||| |||||||    |||||||    
T  9923165 ggaggatgggggccggagttgttcttcatggtggagggagatagtgaggattagagatgggataggtgagggtggagagggttggtttgggtcttgtgtt 9923066  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgtg 196  Q
    ||||||||||| || || || || || || ||||||||||| || |||||||||||   |||||| |||||||    
T  9923065 aggaggagggtgggagacggtgcagagacagatttttggcgggattgttggtgtggagatgttccattgtgtg 9922993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 24 - 164
Target Start/End: Complemental strand, 32267126 - 32266986
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||| ||||||||| |||||||| |||||||||||||||||||| ||||||||||||| |||||| |||||||| ||||| |||||||    |||||||    
T  32267126 ggaggttgggggccggagttgttcgtcgtggtggagggagatagtaaggattagagatgggataggtgagggtggagaggggtggtttgggtcttgtgtt 32267027  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcg 164  Q
    ||||||| ||| || ||||| || ||||| |||||||||||    
T  32267026 aggaggaaggtgggagatggtgcggatactgatttttggcg 32266986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 112
Target Start/End: Original strand, 172615 - 172703
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttg 112  Q
    ||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||| |||||| |||||||| ||||| |||||||    
T  172615 ggaggatgggggccggagttgttcttcgtggtggagggagatcgtgaggattagagatgggataggtgagggtggagagggatggtttg 172703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 41664944 - 41665080
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||| |||| | |||||||| ||||| |||||||     ||||||    
T  41664944 ggaggatgggggccggagttgttcttcgtggtggatggagatagtgaggattagagatgggatatgtgagggtggagagggttggtttgggacgtgtgtt 41665043  T
Q  124 aggaggagggtaggggatggagccgataccgattttt 160  Q
    ||||||||||| || ||||| || || || |||||||    
T  41665044 aggaggagggtgggagatggtgcagacactgattttt 41665080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 179
Target Start/End: Complemental strand, 7924950 - 7924795
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||| |||| | |||||||| ||||| |||||||    |||||||    
T  7924950 ggaggatgggggccggagttgttcttcgtggtggagggagattgtgaggattagagatgggatacgtgagggtggagagggatggtttgggtcttgtgtt 7924851  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtgg 179  Q
    | |||||| || ||  |||| ||  |||| |||||| |||| || |||||||||||    
T  7924850 acgaggagagtgggacatggggcacatactgattttgggcgtgattgttggtgtgg 7924795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 38046922 - 38046875
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttag 71  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  38046922 ggaggatgggggccgaagttgttcttcgtgatggagggagatagttag 38046875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 36157718 - 36157660
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatg 82  Q
    ||||| ||||||||| ||||||||||| |||||||||||| | |  |||||||||||||    
T  36157718 ggaggttgggggccggagttgttcttcttggtggagggaggtggcgaggattagagatg 36157660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 169; Significance: 1e-90; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 24 - 260
Target Start/End: Complemental strand, 14440308 - 14440072
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||     
T  14440308 ggaggatgggggccggagttgttcttcgtggtggagggagatagctaggattagagatgggataggcgagggtggggagggctggtttgcaggttgtgt- 14440210  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgtgt--gttttagacggctatatgatttag 221  Q
     ||||||||||  |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||  ||||||| ||||||||||||||||    
T  14440209 -ggaggagggtgagggatggagccgataccgatatttggcgagattgttggtgtggtagtgttccgttgtgtgtgcgttttaggcggctatatgatttag 14440111  T
Q  222 ctctcaataaagtaattatggtgaggaacatgttcttgt 260  Q
    || ||||||||||||||| |||| |||||||||| ||||    
T  14440110 ctgtcaataaagtaattacggtgcggaacatgtttttgt 14440072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 24 - 260
Target Start/End: Complemental strand, 12646100 - 12645862
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||  |||||||| | |||||||    
T  12646100 ggaggatgggggccggagttgttcttcttggtggagggagatagtcaggattagagatgggataggcgagggtggggaggattggtttgcggattgtgtt 12646001  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgt--gtgttttagacggctatatgatttag 221  Q
    ||||||||||| || |||||||||   || |||||||||||||| |||||||||||||||||||| ||||||  | | ||||| || |||||||| ||||    
T  12646000 aggaggagggtgggagatggagccacaacagatttttggcgagattgttggtgtggtagtgttcctttgtgtgagcgctttaggcgactatatgacttag 12645901  T
Q  222 ctctcaataaagtaattatggtgaggaacatgttcttgt 260  Q
    || ||||||||||||| |  || ||||||||||||||||    
T  12645900 ctgtcaataaagtaatcacagtaaggaacatgttcttgt 12645862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 24 - 237
Target Start/End: Complemental strand, 28253284 - 28253069
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||| ||||| ||||||||||||||| |||||| | | |||||||    
T  28253284 ggaggatgggggccggagttgttcttcttggtggagggagatagtgaggattagagatgggatagacgagggtggggagggttggttttcggtttgtgtt 28253185  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgtt--gtgtgtgttttagacggctatatgatttag 221  Q
    ||||||||||| ||||||||  ||||||| ||||||||||| || ||| ||||||||  ||||| |||  ||| | | |||||||||||||||||||| |    
T  28253184 aggaggagggtgggggatggttccgatactgatttttggcgggattgtcggtgtggtgatgttctgtttcgtgagcgctttagacggctatatgatttgg 28253085  T
Q  222 ctctcaataaagtaat 237  Q
    |  |||| ||||||||    
T  28253084 ccgtcaacaaagtaat 28253069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 101 - 260
Target Start/End: Complemental strand, 40177155 - 40176994
Alignment:
Q  101 agggctggtttgcaggttgtgttaggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgtg--tg 198  Q
    |||| |||||||| | |||||||||||||||||| ||||||||||  ||||||||||||||| |||| ||||||||||||||||||||||||||||   |    
T  40177155 agggttggtttgcggattgtgttaggaggagggtgggggatggagttgataccgatttttggtgagattgttggtgtggtagtgttccgttgtgtgaacg 40177056  T
Q  199 ttttagacggctatatgatttagctctcaataaagtaattatggtgaggaacatgttcttgt 260  Q
     ||||| || || ||||| |||||  ||||||||  ||| | ||||||||| ||||||||||    
T  40177055 ctttaggcgactttatgacttagccatcaataaatcaatcacggtgaggaagatgttcttgt 40176994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 146
Target Start/End: Original strand, 33515783 - 33515905
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    |||||||||||| || || |||||||||||||||||||||||||| | ||||| ||| | |||| | |||||||||||||| |||||| | | |||||||    
T  33515783 ggaggatgggggtcggagctgttcttcgtggtggagggagatagtcaagattaaagacgggatatgtgagggtggggagggttggtttacggattgtgtt 33515882  T
Q  124 aggaggagggtaggggatggagc 146  Q
    ||||||||||| |||||||||||    
T  33515883 aggaggagggtgggggatggagc 33515905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 1380646 - 1380603
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatag 67  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||||    
T  1380646 ggaggttgggggccggagttgttcttcttggtggagggagatag 1380603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 37445657 - 37445618
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggag 63  Q
    ||||||||||||||| |||||||||||||||||| |||||    
T  37445657 ggaggatgggggccggagttgttcttcgtggtggtgggag 37445618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 15018241 - 15018183
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatg 82  Q
    ||||| ||||||||||||||||||||| |||||| ||||| |||  |||||||| ||||    
T  15018241 ggaggttgggggccgaagttgttcttcttggtggcgggaggtagggaggattagggatg 15018183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 22725015 - 22725073
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatg 82  Q
    ||||||||||||||| |||||||||||||||||| || || | || |||||| ||||||    
T  22725015 ggaggatgggggccggagttgttcttcgtggtggcggaaggttgtgaggatttgagatg 22725073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 35488394 - 35488350
Alignment:
Q  31 gggggccgaagttgttcttcgtggtggagggagatagttaggatt 75  Q
    |||||||||||| |||||||||||||| ||||| ||| |||||||    
T  35488394 gggggccgaagtggttcttcgtggtggcgggaggtaggtaggatt 35488350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 154; Significance: 1e-81; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 46 - 260
Target Start/End: Complemental strand, 10777326 - 10777110
Alignment:
Q  46 tcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgttaggaggagggtaggggatggag 145  Q
    ||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10777326 tcttcgtggtggagggagatagttaggattagagatgggatatgtgagggtggggagggctggtttgcaggttgtgttaggaggagggtgggggatggag 10777227  T
Q  146 ccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgtgt--gttttagacggctatatgatttagctctcaataaagtaattatggt 243  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||  ||||||| ||||| |||||||||||| |||||||| | |||| |||    
T  10777226 ccgatactgatttttggcgagattgttggtgtggtagtgttccgttgtgtgtgcgttttaggcggctttatgatttagctgtcaataaaattattacggt 10777127  T
Q  244 gaggaacatgttcttgt 260  Q
    | |||||||||||||||    
T  10777126 gcggaacatgttcttgt 10777110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 24 - 252
Target Start/End: Original strand, 25857000 - 25857230
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| |||||||||| ||||||||||||||| || ||||||||||||| |||||| |||||||||||||| |||||| |||||||||||    
T  25857000 ggaggatgggggccggagttgttctttgtggtggagggagattgtgaggattagagatgggataggtgagggtggggagggatggttttcaggttgtgtt 25857099  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgtgt--gttttagacggctatatgatttag 221  Q
    ||||||||||| ||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||  ||||||| ||||| ||||||||||    
T  25857100 aggaggagggtgggggatggagctgataccgatttttggcgcgattgttggtgtggcagtgttccgttgtgtgtgcgttttaggcggctttatgatttag 25857199  T
Q  222 ctctcaataaagtaattatggtgaggaacat 252  Q
    || ||||||| || ||||  ||| |||||||    
T  25857200 ctgtcaataatgttattacagtgcggaacat 25857230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 24 - 260
Target Start/End: Original strand, 8299758 - 8299996
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| |||||||||| ||||||||||||||| || ||||||| ||||| |||||| |||||||||||||| |||||| |||||||||||    
T  8299758 ggaggatgggggccggagttgttctttgtggtggagggagattgtgaggattaaagatgggataggtgagggtggggagggatggttttcaggttgtgtt 8299857  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgtgt--gttttagacggctatatgatttag 221  Q
    ||||||||||| ||||||||||| ||||||||||||||||| || ||||||||||| |||||||| ||||||||  ||||||| ||||| ||||||||||    
T  8299858 aggaggagggtgggggatggagctgataccgatttttggcgcgattgttggtgtggcagtgttccattgtgtgtgcgttttaggcggctttatgatttag 8299957  T
Q  222 ctctcaataaagtaattatggtgaggaacatgttcttgt 260  Q
    || ||||||| || ||||  ||| |||||||||| ||||    
T  8299958 ctgtcaataatgttattacagtgcggaacatgtttttgt 8299996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 24 - 260
Target Start/End: Complemental strand, 27796048 - 27795809
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagatag-gcgagggtggggagggctggtttgcaggttgtgt 122  Q
    ||||||||||||||  ||||||||||||||||||||||||  ||| | ||||||||||| ||||| |||||||||| ||||| |||||||  | ||||||    
T  27796048 ggaggatgggggccagagttgttcttcgtggtggagggagtaagtcaagattagagatgggatagcgcgagggtggagagggttggtttgtggattgtgt 27795949  T
Q  123 taggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgt--gtgttttagacggctatatgattta 220  Q
    |||||||||||| ||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||  | | ||||| || || ||||| |||    
T  27795948 taggaggagggtgggggatggagctgatactgatttttggcgagattgttggtgtggtagtgttccgttgtgtgagcgctttaggcgtctttatgactta 27795849  T
Q  221 gctctcaataaagtaattatggtgaggaacatgttcttgt 260  Q
    ||| || |||||  ||| | || |||||||||||||||||    
T  27795848 gctatccataaatcaatcacggcgaggaacatgttcttgt 27795809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 24 - 196
Target Start/End: Complemental strand, 31642075 - 31641903
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| ||||||||||||| |||||| |||||||| ||||| |||||||    |||||||    
T  31642075 ggaggatgggggccggagttgttcttcatggtggcgggagatagtgaggattagagatgggataggtgagggtggagagggttggtttgggtcttgtgtt 31641976  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgtg 196  Q
    ||||||||||| || || || || ||||| ||||||||||| || ||||||||||| | |||||| |||||||    
T  31641975 aggaggagggtgggagacggtgcagatacagatttttggcgggattgttggtgtggaaatgttcctttgtgtg 31641903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 24 - 179
Target Start/End: Original strand, 30731890 - 30732045
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| ||||||||||| |||||||||||||| || ||||||||||||| |||||| |||||||| ||||| |||||||     ||||||    
T  30731890 ggaggatgggggccggagttgttcttcatggtggagggagattgtgaggattagagatgggataggtgagggtggagagggttggtttgggacatgtgtt 30731989  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtgg 179  Q
    ||||||||||| || ||||| || ||||| ||||||||||| || |||||||||||    
T  30731990 aggaggagggtgggagatggtgcagatactgatttttggcgtgattgttggtgtgg 30732045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 24 - 179
Target Start/End: Complemental strand, 42514284 - 42514129
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||| |||||| |||||||| ||||| |||||||    |||||||    
T  42514284 ggaggatgggggccggagttgttcttcgtggtggagggagattgtgaggattagagatgggataggtgagggtggagagggatggtttgggtcttgtgtt 42514185  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtgg 179  Q
    |||||||| || || ||||| || ||||| ||||| ||||| || |||||||||||    
T  42514184 aggaggagagtgggagatggggcagatactgatttctggcgtgattgttggtgtgg 42514129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 164
Target Start/End: Complemental strand, 23238947 - 23238807
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||| ||||||||| |||||||| |||||||||||||||||||| ||||||||||||| |||||| |||||||| ||||| |||||||    |||||||    
T  23238947 ggaggttgggggccggagttgttcgtcgtggtggagggagatagtgaggattagagatgggataggtgagggtggagaggggtggtttgggtcttgtgtt 23238848  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcg 164  Q
    ||||||||||| || |||||  | |||||||||||||||||    
T  23238847 aggaggagggtgggagatggtacggataccgatttttggcg 23238807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 196
Target Start/End: Original strand, 28535251 - 28535423
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||||| ||||| |||||||    |||||||    
T  28535251 ggaggatgggggccggagttgttcttcatggtggagggagatagtgaggattagagatgggataggtgagggtggagagggttggtttgggtcttgtgtt 28535350  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgtg 196  Q
    ||||||||||| || || || |  || || ||||||||||| || |||||||||||   |||||| |||||||    
T  28535351 aggaggagggtgggagacggtgtagaaacagatttttggcgggattgttggtgtggagatgttcctttgtgtg 28535423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 24 - 179
Target Start/End: Original strand, 35983367 - 35983522
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||| |||||| || ||||| ||||| ||||||| |  |||||||    
T  35983367 ggaggatgggggccggagttgttcttcgtggtggagggagattgtgaggattagagatgggataggtgacggtggagagggttggtttggatcttgtgtt 35983466  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtgg 179  Q
    ||||||||||| || || || || || || ||||||||||| || ||| |||||||    
T  35983467 aggaggagggtgggagacggtgcagaaacggatttttggcgtgattgtaggtgtgg 35983522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 197
Target Start/End: Complemental strand, 12825763 - 12825590
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    |||||||||||| |  |||||||||||||||||||||||||| || ||||||||||||| |||||| |||||||| ||||| |||||||     ||||||    
T  12825763 ggaggatgggggtcagagttgttcttcgtggtggagggagattgtgaggattagagatgggataggtgagggtggagagggttggtttgggacatgtgtt 12825664  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgtgt 197  Q
    ||||||||||| || ||||| || ||||| ||||||||||| || |||||| ||||   |||||| ||||||||    
T  12825663 aggaggagggtgggagatggtgcagatactgatttttggcgtgattgttggagtggagatgttcctttgtgtgt 12825590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 24 - 164
Target Start/End: Original strand, 27116749 - 27116889
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||| |||||| |||||||| | ||| |||||||    |||||||    
T  27116749 ggaggatgggggccggagttgttcttcgtggtggagggagatcgtgaggattagagatgggataggtgagggtggagggggatggtttgggtcttgtgtt 27116848  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcg 164  Q
    ||||||||||| || ||||| |  ||||| |||||||||||    
T  27116849 aggaggagggtgggagatggtgtagatactgatttttggcg 27116889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 24 - 134
Target Start/End: Original strand, 27165526 - 27165636
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||| ||||||||||||||||||||| | ||||||    |||||     
T  27165526 ggaggatgggggccgaagttgttcttcttggtggagggagataatgaggattagagatgggataggcgagggtggggaggggttgtttgcgctgtgtgtc 27165625  T
Q  124 aggaggagggt 134  Q
    |||||||||||    
T  27165626 aggaggagggt 27165636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 189
Target Start/End: Complemental strand, 42928695 - 42928530
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||| ||| ||||||||| |||||| |||||||| |||||||||||||  |  ||| ||    
T  42928695 ggaggatgggggccggagttgttcttcgtggtggaggcagatagtgagggttagagatgggataggtgagggtggagagggctggtttggggcgtgtttt 42928596  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccg 189  Q
    ||||||||||| || || || || || || ||||||| ||| || |||||||| |||  |||||||    
T  42928595 aggaggagggtgggtgacggtgctgaaacagatttttagcgtgattgttggtgcggtgatgttccg 42928530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 198
Target Start/End: Complemental strand, 33170222 - 33170048
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| |||||||| || |||||| |||||||||| |||||||| |||| |||||  |||||  | ||||| |||||||||    |||||    
T  33170222 ggaggatgggggccggagttgttcatcttggtggcgggagatagtgaggattagggatgggatagaagagggatgagagggttggtttgcatcaggtgtt 33170123  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgtgtg 198  Q
    |||||   ||| || || || || || || || |||||||| || ||||||||||| | ||||||||| ||||||    
T  33170122 aggagacaggtgggagacggtgctgagactgacttttggcgtgattgttggtgtggaaatgttccgttttgtgtg 33170048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 22094826 - 22094865
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggag 63  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  22094826 ggaggatgggggccgaagttgttcttcgtggtggcgggag 22094865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 151; Significance: 7e-80; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 24 - 255
Target Start/End: Original strand, 10576826 - 10577059
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||  ||||||||||    
T  10576826 ggaggatgggggccggagttgctcttcgtggtggagggagatagttaggattagagatgggataggtgagggtggggagggctggtttataggttgtgtt 10576925  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgtgt--gttttagacggctatatgatttag 221  Q
    ||||||||||| ||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||  ||||||| ||||| |||||||||     
T  10576926 aggaggagggtgggggatggagctgataccgatttttggtgagattgttggtgtggtagtgttccgttgtgtgttcgttttaggcggctttatgatttaa 10577025  T
Q  222 ctctcaataaagtaattatggtgaggaacatgtt 255  Q
    || |||||||||| ||||  ||| ||||||||||    
T  10577026 ctgtcaataaagttattacagtgcggaacatgtt 10577059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 24 - 260
Target Start/End: Original strand, 17605910 - 17606148
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| ||||||||||| | |||||||||||| || ||||||||||||| |||||| ||||||||||||||||||||| |||||||||||    
T  17605910 ggaggatgggggccggagttgttcttctttgtggagggagattgtgaggattagagatgggataggtgagggtggggagggctggtttacaggttgtgtt 17606009  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgtgt--gttttagacggctatatgatttag 221  Q
    ||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||| ||||| ||||||||||    
T  17606010 aggaggagggtgggggatggagctgataccgatttttggcgagattgttggtgtggtagtgttccgttgtgtgtgcgttttaggcggctttatgatttag 17606109  T
Q  222 ctctcaataaagtaattatggtgaggaacatgttcttgt 260  Q
    || |||||||||| |||   ||| |||||||||| ||||    
T  17606110 ctgtcaataaagttatttcagtgcggaacatgtttttgt 17606148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 32 - 260
Target Start/End: Original strand, 20882617 - 20882847
Alignment:
Q  32 ggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgttaggaggag 131  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  20882617 ggggccggagttgttcttcgtggtggagggagatagtcaggattagagatgggataggcgagggtggggagggttggtttgcatgttgtgttaggaggag 20882716  T
Q  132 ggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgt--gtgttttagacggctatatgatttagctctcaat 229  Q
    ||| |||||||||||||| ||| ||||||||||||| ||||||||||||||||||||| |||||  | | ||||| |||||||||||||||| | | |||    
T  20882717 ggtgggggatggagccgaaaccaatttttggcgagattgttggtgtggtagtgttccgctgtgtgagcgctttaggcggctatatgatttagttgttaat 20882816  T
Q  230 aaagtaattatggtgaggaacatgttcttgt 260  Q
    |||||||| || |||||||||||||||||||    
T  20882817 aaagtaatcattgtgaggaacatgttcttgt 20882847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 24 - 260
Target Start/End: Original strand, 21629683 - 21629921
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||| |||| | ||||||||||||||||||||| |||||||||||    
T  21629683 ggaggatgggggccggagttgctcttcgtggtggagggagattgttaggattagagatgggataagtgagggtggggagggctggttttcaggttgtgtt 21629782  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgtgt--gttttagacggctatatgatttag 221  Q
    ||||||||||| ||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||  ||||||| ||||| ||||||||||    
T  21629783 aggaggagggtgggggatggagctgatatcgatttttggcgagattgttggtgtggtagtgttccgttgtgtgtgcgttttaggcggctttatgatttag 21629882  T
Q  222 ctctcaataaagtaattatggtgaggaacatgttcttgt 260  Q
    || |||||||||| |||   ||| |||||||||| ||||    
T  21629883 ctgtcaataaagttatttcagtgcggaacatgtttttgt 21629921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 60 - 260
Target Start/End: Original strand, 17573268 - 17573470
Alignment:
Q  60 ggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgttaggaggagggtaggggatggagccgataccgatttt 159  Q
    |||||| || ||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||    
T  17573268 ggagattgtgaggattagagatgggataggtgagggtggggagggctggttttcaggttgtgttaggaggagggtgggggatggagctgataccgatttt 17573367  T
Q  160 tggcgagactgttggtgtggtagtgttccgttgtgtgt--gttttagacggctatatgatttagctctcaataaagtaattatggtgaggaacatgttct 257  Q
    ||||| || |||||||||||||||||||||||||||||  ||||||| ||||| |||||||||||| |||||||||| ||||   || |||||||||| |    
T  17573368 tggcgcgattgttggtgtggtagtgttccgttgtgtgtgcgttttaggcggctttatgatttagctgtcaataaagttattacaatgcggaacatgtttt 17573467  T
Q  258 tgt 260  Q
    |||    
T  17573468 tgt 17573470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 24 - 237
Target Start/End: Original strand, 14372567 - 14372782
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| | |||||  |||||||||||||| |||||| | ||||||||     
T  14372567 ggaggatgggggccggagttgttcttcttggtggagggagatagtcaggattagagacgggatagatgagggtggggagggttggttttcgggttgtgtc 14372666  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgtt--gtgtgtgttttagacggctatatgatttag 221  Q
    ||||||||||| ||||||||  ||||||| ||||||||||| || ||||||||||||| |||||||||  ||| |   ||||||||| |||||||||| |    
T  14372667 aggaggagggtgggggatggttccgatactgatttttggcgggattgttggtgtggtaatgttccgtttcgtgagcactttagacggttatatgatttgg 14372766  T
Q  222 ctctcaataaagtaat 237  Q
    |  |||| ||||||||    
T  14372767 ccgtcaacaaagtaat 14372782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 2554170 - 2554051
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| ||||||||||||||||||||||||||| | ||| ||||||||| |||||| |||||||| ||||| |||||||    |||||||    
T  2554170 ggaggatgggggccggagttgttcttcgtggtggagggagataatgagggttagagatgggataggtgagggtggagagggatggtttgggacttgtgtt 2554071  T
Q  124 aggaggagggtaggggatgg 143  Q
    ||||||||||| || |||||    
T  2554070 aggaggagggtgggagatgg 2554051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 134
Target Start/End: Original strand, 24767005 - 24767115
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    |||||||||||| || ||||||||||||||||||||||||||||| |||||||| |||| |||| | |||||||| |||||||||||||  |  ||||||    
T  24767005 ggaggatgggggtcggagttgttcttcgtggtggagggagatagtgaggattagggatgggatatgtgagggtggagagggctggtttggggcgtgtgtt 24767104  T
Q  124 aggaggagggt 134  Q
    |||||||||||    
T  24767105 aggaggagggt 24767115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 97 - 237
Target Start/End: Original strand, 15958462 - 15958604
Alignment:
Q  97 ggggagggctggtttgcaggttgtgttaggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgtg 196  Q
    |||||||| |||||| | | |||||||||||||||||| ||||||||| |||| || ||||||||||| || ||||||||||||| ||||||||| ||||    
T  15958462 ggggagggttggttttcggattgtgttaggaggagggtgggggatggatccgaaactgatttttggcgtgattgttggtgtggtaatgttccgttttgtg 15958561  T
Q  197 tg--ttttagacggctatatgatttagctctcaataaagtaat 237  Q
     |   ||||| |||||||||||||| ||| |||| ||||||||    
T  15958562 agctctttagtcggctatatgatttggctgtcaacaaagtaat 15958604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 198
Target Start/End: Complemental strand, 13938283 - 13938109
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| |||||||| || ||||||  ||||||||| ||||||||||||| |||||| ||||| || ||||| |||||||||    |||||    
T  13938283 ggaggatgggggccggagttgttcatcttggtggcaggagatagtgaggattagagatgggataggagagggaggagagggttggtttgcatcaggtgtt 13938184  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgtgtg 198  Q
    |||||   ||| || ||||| || || || || ||||| || || ||||||||||| | ||||||||| ||||||    
T  13938183 aggagagaggtgggagatggtgctgagactgacttttgtcgtgattgttggtgtggaaatgttccgttttgtgtg 13938109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 180
Target Start/End: Complemental strand, 33185982 - 33185843
Alignment:
Q  41 gttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgttaggaggagggtagggga 140  Q
    |||||||||| ||||||| ||||||||| || || ||||||| | | ||||  ||||| ||||| ||||||| |  || |||  |||||||||| |||||    
T  33185982 gttgttcttcttggtggatggagatagtgagaataagagatggggttggcggaggtggtgaggggtggtttgtatcttatgtctggaggagggtggggga 33185883  T
Q  141 tggagccgataccgatttttggcgagactgttggtgtggt 180  Q
    ||| || || || ||||||||||| || ||||||||||||    
T  33185882 tggggctgaaactgatttttggcgtgattgttggtgtggt 33185843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 18682150 - 18682240
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgca 114  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| | |||||   |||  ||||| ||||||| |||||| |||||||||    
T  18682150 ggaggatgggggccggagttgttcttcttggtggcgggagatagtgaagattaataatggtataggtgagggtgaggagggatggtttgca 18682240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 10922115 - 10922073
Alignment:
Q  26 aggatgggggccgaagttgttcttcgtggtggagggagatagt 68  Q
    ||||||||||||| ||||||||||| |||||||||||||||||    
T  10922115 aggatgggggccggagttgttcttcttggtggagggagatagt 10922073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 5085602 - 5085641
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggag 63  Q
    ||||||||||||||||||||||||||| |||||| |||||    
T  5085602 ggaggatgggggccgaagttgttcttcttggtggcgggag 5085641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 17078766 - 17078824
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatg 82  Q
    ||||| ||||||||| ||||||||||| |||||||||||| |||   ||||||||||||    
T  17078766 ggaggttgggggccggagttgttcttcttggtggagggaggtagggcggattagagatg 17078824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 18051025 - 18051083
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatg 82  Q
    ||||| ||||||||| ||||||||||| |||||||||||| |||   ||||||||||||    
T  18051025 ggaggttgggggccggagttgttcttcttggtggagggaggtagggcggattagagatg 18051083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 17577294 - 17577335
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagat 65  Q
    ||||||||||||||  |||||||||| |||||||||||||||    
T  17577294 ggaggatgggggccagagttgttctttgtggtggagggagat 17577335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 148; Significance: 4e-78; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 24 - 260
Target Start/End: Complemental strand, 37255322 - 37255084
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||| | |||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||| |||| | |||||||| |||||||||    
T  37255322 ggaggatgggggctggagttgttcatcgtgatggagggagatagtcaggattagagatgagataggcgagggtgaggagagttggtttgcgggttgtgtt 37255223  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgt--gtgttttagacggctatatgatttag 221  Q
    ||||||||||| |||||||||||||| ||||||||||||||||| |||||||| |||||||||||| |||||  | | ||||| ||||||||||||||||    
T  37255222 aggaggagggtgggggatggagccgaaaccgatttttggcgagattgttggtgcggtagtgttccgctgtgtgagcgctttaggcggctatatgatttag 37255123  T
Q  222 ctctcaataaagtaattatggtgaggaacatgttcttgt 260  Q
    || ||||||||||||| | ||||||||||||||||||||    
T  37255122 ctgtcaataaagtaatcacggtgaggaacatgttcttgt 37255084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 24 - 260
Target Start/End: Complemental strand, 31423166 - 31422928
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||| |||||||||    
T  31423166 ggaggatgggggccggagttgttcttcgtggttgagggagatagtcaggattagagatgggataggcgagggtggggagggatggtttgcgggttgtgtt 31423067  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgt--gtgttttagacggctatatgatttag 221  Q
    ||||||||||| | |||||||   || || |||||||||||||| |||||||||||||| ||||||||||||  | | ||||| ||||||||||| ||||    
T  31423066 aggaggagggtggaggatggaattgaaacggatttttggcgagattgttggtgtggtagagttccgttgtgtgagcgatttaggcggctatatgacttag 31422967  T
Q  222 ctctcaataaagtaattatggtgaggaacatgttcttgt 260  Q
    || ||||||||||||| |  |||||||||||| ||||||    
T  31422966 ctgtcaataaagtaatcacagtgaggaacatgctcttgt 31422928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 24 - 179
Target Start/End: Original strand, 4937704 - 4937859
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||| |||||| |||||||| ||||| |||||||    |||||||    
T  4937704 ggaggatgggggccggagttgttcttcgtggtggagggagattgtgaggattagagatgggataggtgagggtggagagggatggtttgggtcttgtgtt 4937803  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtgg 179  Q
    |||||||| || || ||||| || ||||| ||||||||||| || |||||||||||    
T  4937804 aggaggagagtgggagatggggcagatactgatttttggcgtgattgttggtgtgg 4937859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 162
Target Start/End: Original strand, 11276824 - 11276962
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||| ||| |||||||| |||||||||||||||||||| ||||||||||||| |||||| |||||||| ||||| |||||||    |||||||    
T  11276824 ggaggatggggcccggagttgttcgtcgtggtggagggagatagtgaggattagagatgggataggtgagggtggagaggggtggtttgggtcttgtgtt 11276923  T
Q  124 aggaggagggtaggggatggagccgataccgatttttgg 162  Q
    ||||||||||| || ||||| || |||||||||||||||    
T  11276924 aggaggagggtgggagatggtgcagataccgatttttgg 11276962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 24 - 179
Target Start/End: Complemental strand, 17721199 - 17721044
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||| |||||| |||||||| ||||| |||||||    |||||||    
T  17721199 ggaggatgggggccggagttgttcttcatggtggagggagatagtgaggattagagatgggataggtgagggtggagagggttggtttgggtcttgtgtt 17721100  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtgg 179  Q
    ||||||||||| || || || || || || ||||||||| | || |||||||||||    
T  17721099 aggaggagggtgggagacggtgcagagacagatttttggtgggattgttggtgtgg 17721044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 24 - 134
Target Start/End: Original strand, 235014 - 235124
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||| ||||     ||||||    
T  235014 ggaggatgggggccggagttgttcttcgtggtggagggagatagtgaggattagagatgggataggcgagggtggagagggctgatttgggacgtgtgtt 235113  T
Q  124 aggaggagggt 134  Q
    |||||||||||    
T  235114 aggaggagggt 235124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 24 - 164
Target Start/End: Complemental strand, 29968538 - 29968398
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    |||||||| |||||| |||||||| |||||||||||||||||||| ||||||||||||| |||||| |||||||| ||||| || ||||    |||||||    
T  29968538 ggaggatgcgggccggagttgttcgtcgtggtggagggagatagtgaggattagagatgggataggtgagggtggagagggatgatttgggtcttgtgtt 29968439  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcg 164  Q
    ||||||| ||| || ||||| || |||||||||||||||||    
T  29968438 aggaggaaggtgggagatggtgcggataccgatttttggcg 29968398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 92 - 260
Target Start/End: Complemental strand, 25619961 - 25619790
Alignment:
Q  92 agggtggggagggctggtttgcaggttgtgttaggaggagggtagggg-atggagccgataccgatttttggcgagactgttggtgtggtagtgttccgt 190  Q
    |||||| ||| || |||||||| | |||||||||||| ||||| |||| |||||||||| | ||||||| ||||||| |||||||||  ||||||||||     
T  25619961 agggtgaggaaggttggtttgcggtttgtgttaggagaagggtggggggatggagccgaaatcgattttgggcgagattgttggtgttatagtgttccgc 25619862  T
Q  191 tgtgtgt--gttttagacggctatatgatttagctctcaataaagtaattatggtgaggaacatgttcttgt 260  Q
    ||||||   | ||||| |||||||||||| ||| | ||||||||||||| | ||||||||||||||||||||    
T  25619861 tgtgtgaacgatttaggcggctatatgatctagttgtcaataaagtaatcacggtgaggaacatgttcttgt 25619790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 32 - 112
Target Start/End: Complemental strand, 47877539 - 47877459
Alignment:
Q  32 ggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttg 112  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| || || |||||||    
T  47877539 ggggccggagttgttcttcgtggtggagggagatagtgaggattagagatgggataggcgagggtggagatggatggtttg 47877459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 36364080 - 36364036
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagt 68  Q
    |||||||| |||||||||||||||||| || ||||||||||||||    
T  36364080 ggaggatgagggccgaagttgttcttcttgatggagggagatagt 36364036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 34232263 - 34232207
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagaga 80  Q
    ||||| ||||||||| ||||||||||| |||||||||||| |||   ||||||||||    
T  34232263 ggaggttgggggccggagttgttcttcttggtggagggaggtagggcggattagaga 34232207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 39931172 - 39931216
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagt 68  Q
    ||||||||||||||| ||||||||||  |||||| ||||||||||    
T  39931172 ggaggatgggggccggagttgttcttgttggtggtgggagatagt 39931216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 141; Significance: 6e-74; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 24 - 257
Target Start/End: Complemental strand, 19891241 - 19891006
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||| ||| || ||||||||||||||||||    
T  19891241 ggaggatgggggccgaagttgttcttcgtggtggagggagatagtcaggattagagatgggataagcgagggtgaggaaggttggtttgcaggttgtgtt 19891142  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgt--gtgttttagacggctatatgatttag 221  Q
    ||||||||||| |||||||||||||| | |||||||| | |||| ||||||||||||||||||||| |||||  | | ||||| |||||||| ||| |||    
T  19891141 aggaggagggtgggggatggagccgaaatcgattttttgtgagattgttggtgtggtagtgttccgctgtgtgcgcgatttaggcggctatacgatctag 19891042  T
Q  222 ctctcaataaagtaattatggtgaggaacatgttct 257  Q
    || ||||||||||||| || ||||||||||||||||    
T  19891041 ctgtcaataaagtaatcattgtgaggaacatgttct 19891006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 24 - 260
Target Start/End: Original strand, 12341831 - 12342069
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||    
T  12341831 ggaggatgggggccggagttgctcttcgtggtggagggagattgttaggattagagatgggataggtgagggtggggagggctggtttacaggttgtgtt 12341930  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgtgt--gttttagacggctatatgatttag 221  Q
    | ||||||||| ||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||  ||||||| | ||| ||||||||||    
T  12341931 aagaggagggtgggggatggagctgataccaatttttggcgagattgttggtgtggtagtgttccgttgtgtgtgcgttttaggcagctttatgatttag 12342030  T
Q  222 ctctcaataaagtaattatggtgaggaacatgttcttgt 260  Q
    || ||| |||||| ||||  |||  ||||||||| ||||    
T  12342031 ctgtcactaaagttattacagtgcagaacatgtttttgt 12342069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 24 - 260
Target Start/End: Original strand, 48569615 - 48569853
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||| |||||| |||||||||||||| |||||||  | |||||||    
T  48569615 ggaggatgggggccgaagctgttcttcgtggtagagggagatagtcaggattagagatgggataggtgagggtggggagggttggtttgtggattgtgtt 48569714  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgt--gtgttttagacggctatatgatttag 221  Q
    ||||||||||| ||||||||||| |||||||||||||||| ||| ||||||||||||||||||| |||||||  | | ||||  || || ||||| ||||    
T  48569715 aggaggagggtgggggatggagctgataccgatttttggcaagattgttggtgtggtagtgttctgttgtgtgagcgctttatgcgtctttatgacttag 48569814  T
Q  222 ctctcaataaagtaattatggtgaggaacatgttcttgt 260  Q
    |  ||||||||| ||| | ||| ||||||||||||||||    
T  48569815 ccgtcaataaagcaatcacggtaaggaacatgttcttgt 48569853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 24 - 260
Target Start/End: Complemental strand, 15313146 - 15312907
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||  | ||||||||||| || ||| || ||||||| ||||||||||||||||||||||||||||||||||| ||||||||    ||||||    
T  15313146 ggaggatgggggttggagttgttcttcttgatggcggaagatagtgaggattagagatgagataggcgagggtggggagggatggtttgcgtcgtgtgtt 15313047  T
Q  124 aggag-gagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgt--gtgttttagacggctatatgattta 220  Q
    |||||  ||||| ||||||||||||||||| ||||||||| | ||  |||||||||||| |||||||||||||  | |||||||||| |||||||| ||     
T  15313046 aggagaaagggtgggggatggagccgatactgatttttggtgtgatagttggtgtggtaatgttccgttgtgtgagcgttttagacgactatatgaattg 15312947  T
Q  221 gctctcaataaagtaattatggtgaggaacatgttcttgt 260  Q
    ||| |||| |||||| | | ||| ||||||||||||||||    
T  15312946 gctgtcaacaaagtagtcacggtaaggaacatgttcttgt 15312907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 59 - 260
Target Start/End: Original strand, 17097488 - 17097691
Alignment:
Q  59 gggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgttaggaggagggtaggggatggagccgataccgattt 158  Q
    |||||||||| || |||||||||| ||||||||||||||||||||| |||||||     |||||||||||  |||| ||||| ||||| ||||| |||||    
T  17097488 gggagatagtgagaattagagatgggataggcgagggtggggaggggtggtttgtgtcgtgtgttaggagacgggtgggggacggagctgatactgattt 17097587  T
Q  159 ttggcgagactgttggtgtggtagtgttccgttgtgt--gtgttttagacggctatatgatttagctctcaataaagtaattatggtgaggaacatgttc 256  Q
    |||||| || ||||||||||||| |||||||||||||  | |||||||||||||||||||||| ||| |||| |||||| | | ||| ||||||||||||    
T  17097588 ttggcgtgattgttggtgtggtaatgttccgttgtgtgagcgttttagacggctatatgatttggctgtcaacaaagtagtcacggtaaggaacatgttc 17097687  T
Q  257 ttgt 260  Q
    ||||    
T  17097688 ttgt 17097691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 24 - 180
Target Start/End: Complemental strand, 2364841 - 2364685
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||| |||||| |||||||| ||||| |||||||    |||||||    
T  2364841 ggaggatgggggccggagttgttcttcgtggtggagggagattgtgaggattagagatgggataggtgagggtggagagggatggtttgggtcttgtgtt 2364742  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggt 180  Q
    |||||||| || || ||||| || ||||| ||||||||||| || ||||||||||||    
T  2364741 aggaggagagtgggagatggggcagatactgatttttggcgtgattgttggtgtggt 2364685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 24 - 179
Target Start/End: Original strand, 10323147 - 10323302
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| |||| ||||||||||||||||||||| || ||||||||||||| |||||| |||||||| ||||| |||||||    |||||||    
T  10323147 ggaggatgggggccggagttattcttcgtggtggagggagattgtgaggattagagatgggataggtgagggtggagagggatggtttgggtcttgtgtt 10323246  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtgg 179  Q
    |||||||| || || ||||| || ||||| ||||||||||| || |||||||||||    
T  10323247 aggaggagagtgggagatggggcagatactgatttttggcgtgattgttggtgtgg 10323302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 24 - 216
Target Start/End: Complemental strand, 16179511 - 16179317
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| ||||||||||| |||||| ||||||| || ||||||||||||| ||||||||||||||||||| | |||||||     ||||||    
T  16179511 ggaggatgggggccggagttgttcttcttggtggcgggagattgtgaggattagagatgggataggcgagggtggggagagatggtttgtgtcgtgtgtt 16179412  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtg--tgtgttttagacggctatatga 216  Q
    || |||||||| ||||||||| || |||| ||||||||||| ||  |||||| ||| | |||||| |||||  || |||||||||| ||||||||    
T  16179411 agtaggagggtgggggatggatccaatactgatttttggcgcgatagttggtatggaattgttcctttgtgtttgcgttttagacgtctatatga 16179317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 106 - 260
Target Start/End: Original strand, 29523379 - 29523535
Alignment:
Q  106 tggtttgcaggttgtgttaggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgtgt--gtttta 203  Q
    |||||| || ||||||||| ||||||||| ||||||||||| ||||||||||| | |||||| |||||||||||||||| ||||||||||||  ||||||    
T  29523379 tggtttacatgttgtgttaagaggagggtgggggatggagctgataccgatttgttgcgagattgttggtgtggtagtgctccgttgtgtgtgcgtttta 29523478  T
Q  204 gacggctatatgatttagctctcaataaagtaattatggtgaggaacatgttcttgt 260  Q
    | ||||| |||||||||||| ||| |||||| ||||  ||| |||||||||| ||||    
T  29523479 ggcggctttatgatttagctgtcactaaagttattacagtgcggaacatgtttttgt 29523535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 179
Target Start/End: Original strand, 19919805 - 19919960
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcag-gttgtgt 122  Q
    ||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||| |||||| ||||| || ||||| |||||| |||  ||||||    
T  19919805 ggaggatgggggccggagttgttcttcgtggtggagggagattgtgaggattagagatgggataggtgagggaggtgagggttggttt-cagacttgtgt 19919903  T
Q  123 taggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtgg 179  Q
    |||||||||||| || ||||| || ||||| ||||||||||| || || ||||||||    
T  19919904 taggaggagggtgggagatggtgcagatactgatttttggcgtgattgctggtgtgg 19919960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 197
Target Start/End: Original strand, 34332391 - 34332564
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||| ||||| |||||||     ||||||    
T  34332391 ggaggatgggggcgggagttgttcttcgtggtggagggagatagtgaggattagagatgggataggtgagggtggagagggatggtttgggacgtgtgtt 34332490  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgtgt 197  Q
    ||||||||||| || ||||| || ||  | ||||||||||| ||  |||||||||| | ||||||  |||||||    
T  34332491 aggaggagggtgggagatggtgcagactcagatttttggcgtgatcgttggtgtggaaatgttccactgtgtgt 34332564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 962739 - 962829
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgca 114  Q
    |||||||||||| || |||||||| || ||||||||||||||||| |||||||| |||| |||||  ||||| ||  |||| |||||||||    
T  962739 ggaggatgggggtcggagttgttcatcttggtggagggagatagtgaggattagggatgggatagaagagggaggatagggttggtttgca 962829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 114
Target Start/End: Complemental strand, 3141415 - 3141325
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgca 114  Q
    ||||||||||||||| | |||||| || |||||| |||||||||| |||| |||||||| |||||| |||||  | ||||| |||||||||    
T  3141415 ggaggatgggggccggaattgttcatcttggtggcgggagatagtgaggactagagatgggataggagagggcagagagggttggtttgca 3141325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 43121242 - 43121282
Alignment:
Q  23 aggaggatgggggccgaagttgttcttcgtggtggagggag 63  Q
    |||||| ||||||||| ||||||||||| ||||||||||||    
T  43121242 aggaggttgggggccggagttgttcttcttggtggagggag 43121282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 133; Significance: 4e-69; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 43 - 260
Target Start/End: Original strand, 2821629 - 2821848
Alignment:
Q  43 tgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgttaggaggagggtaggggatg 142  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||    
T  2821629 tgttcttcgtggtggagggagatagtcaggattagagatgggataggcgagggtggggagggttggtttgcagattgtgttaggaggagggtgggggatg 2821728  T
Q  143 gagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgt--gtgttttagacggctatatgatttagctctcaataaagtaattat 240  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||  | | ||||| || || ||||| |||||  ||||||||| ||| |     
T  2821729 gagctgataccgatttttggcgagattgttggtgtggtagtgttccgttgtgtgagcgctttaggcgtctttatgacttagccatcaataaagcaatcac 2821828  T
Q  241 ggtgaggaacatgttcttgt 260  Q
    ||| ||||||||||||||||    
T  2821829 ggtaaggaacatgttcttgt 2821848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 24 - 260
Target Start/End: Complemental strand, 48312658 - 48312421
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||  | |||||||    
T  48312658 ggaggatgggggccggagttgttcttcgtggtggagggagatagtcaggattagagatgagataggcgagggtggagagggttggtttgtggattgtgtt 48312559  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgt--gtgttttagacggctatatgatttag 221  Q
    ||||||||||| ||||||||||| |||| ||||||||||||||| ||||||||||||| |||||||||||||  | | ||||| || || ||||| ||||    
T  48312558 aggaggagggtgggggatggagctgatatcgatttttggcgagattgttggtgtggta-tgttccgttgtgtgagcgctttaggcgactttatgacttag 48312460  T
Q  222 ctctcaataaagtaattatggtgaggaacatgttcttgt 260  Q
    |  ||||||||  ||| | ||||||||||||||||||||    
T  48312459 ccatcaataaatcaatcacggtgaggaacatgttcttgt 48312421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 24 - 260
Target Start/End: Original strand, 54482735 - 54482973
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    |||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||| | |||||||  | |||||||    
T  54482735 ggaggatgggggtcggagttgttcttcgtggtggagggagatagtcaggattagagatgggataggcgagggtggagagagttggtttgtggattgtgtt 54482834  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgt--gtgttttagacggctatatgatttag 221  Q
    ||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||  | | ||||| |  || ||||| ||||    
T  54482835 aggaggagggtgggggatggagctgataccgatttttggcgagattgttggtgtggtagtgttcccttgtgtgagcgctttaggcatctttatgacttag 54482934  T
Q  222 ctctcaataaagtaattatggtgaggaacatgttcttgt 260  Q
    |  ||||||||  ||||| ||||||||||||||||||||    
T  54482935 ccatcaataaatcaattacggtgaggaacatgttcttgt 54482973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 24 - 260
Target Start/End: Original strand, 55725282 - 55725520
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| | ||| ||||||| ||||||||||||||||||||| |||||||| | |||||||    
T  55725282 ggaggatgggggccggagttgttcttcttggtggagggagatagtcatgatcagagatgggataggcgagggtggggagggttggtttgcggattgtgtt 55725381  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgt--gtgttttagacggctatatgatttag 221  Q
    |||| |||||| || |||||||||   || |||||||||||||| |||||||||||||||||||| ||||||  | | ||||| || |||||||| ||||    
T  55725382 aggatgagggtgggagatggagccacaacagatttttggcgagattgttggtgtggtagtgttcctttgtgtaagcgctttaggcgactatatgacttag 55725481  T
Q  222 ctctcaataaagtaattatggtgaggaacatgttcttgt 260  Q
    || ||||||||||||| |  || ||||||||||||||||    
T  55725482 ctgtcaataaagtaatcacagtaaggaacatgttcttgt 55725520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 24 - 216
Target Start/End: Original strand, 5789668 - 5789862
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| ||||||||||| |||||| ||||||| || | ||||||||||| ||||||||||||||||||||| ||||||||    ||||||    
T  5789668 ggaggatgggggccggagttgttcttcttggtggcgggagattgtgaagattagagatgggataggcgagggtggggagggatggtttgcgtcgtgtgtt 5789767  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgttgtgtgt--gttttagacggctatatga 216  Q
    || ||||||||  ||||||||||| |||  ||||||||||| || ||||||||||| | |||||||||||||||  |||||||||| ||||||||    
T  5789768 agtaggagggtgcgggatggagccaatattgatttttggcgtgattgttggtgtggaaatgttccgttgtgtgtgcgttttagacgcctatatga 5789862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 24 - 180
Target Start/End: Original strand, 11586774 - 11586930
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||  | | |||||||    
T  11586774 ggagaatgggggccgaagttgttcttcttggtggagggagatagttaggattagagatgggataggtgagggtggggtgggctggttctcggattgtgtt 11586873  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggt 180  Q
    |||||||||||   ||||||| |||| || ||||| ||||| |||||||||||||||    
T  11586874 aggaggagggtgaaggatggatccgaaactgatttctggcgtgactgttggtgtggt 11586930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 24 - 179
Target Start/End: Original strand, 23642167 - 23642322
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||| |||||| |||||||| ||||| |||||||    |||||||    
T  23642167 ggaggatgggggccggagttgttcttcgtggtggagggagattgtgaggattagagatgggataggtgagggtggagagggatggtttgggtcttgtgtt 23642266  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtgg 179  Q
    |||||||| || || ||||| || ||||| ||||||||||| || |||||||||||    
T  23642267 aggaggagagtgggagatggggcagatactgatttttggcgtgattgttggtgtgg 23642322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 24 - 179
Target Start/End: Complemental strand, 47419368 - 47419213
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||| |||||| |||||||| ||||| |||||||    |||||||    
T  47419368 ggaggatgggggccggagttgttcttcgtggtggagggagattgtgaggattagagatgggataggtgagggtggagagggatggtttgggtcttgtgtt 47419269  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtgg 179  Q
    |||||||| || || ||||| || ||||| ||||||||||| || |||||||||||    
T  47419268 aggaggagagtgggagatggggcagatactgatttttggcgtgattgttggtgtgg 47419213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 24 - 164
Target Start/End: Complemental strand, 19755831 - 19755691
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||| ||||| |||||||     ||||||    
T  19755831 ggaggatgggggccggagttgttcttcgtggtggagggagatagtgaggattagagatgggataggtgagggtggagagggatggtttgggatgtgtgtt 19755732  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcg 164  Q
    ||||||||||| || ||||| || || ||||||||||||||    
T  19755731 aggaggagggtgggagatggtgcagacaccgatttttggcg 19755691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 24 - 164
Target Start/End: Original strand, 19783975 - 19784115
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||| ||||| |||||||     ||||||    
T  19783975 ggaggatgggggccggagttgttcttcgtggtggagggagatagtgaggattagagatgggataggtgagggtggagagggatggtttgggatgtgtgtt 19784074  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcg 164  Q
    ||||||||||| || ||||| || || ||||||||||||||    
T  19784075 aggaggagggtgggagatggtgcagacaccgatttttggcg 19784115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 23647825 - 23647932
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||| |||||| |||||||| ||||| |||||||    |||||||    
T  23647825 ggaggatgggggccggagttgttcttcgtggtggagggagattgtgaggattagagatgggataggtgagggtggagagggatggtttgggtcttgtgtt 23647924  T
Q  124 aggaggag 131  Q
    ||||||||    
T  23647925 aggaggag 23647932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 27 - 164
Target Start/End: Original strand, 1828119 - 1828256
Alignment:
Q  27 ggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgttagg 126  Q
    |||||||||||| ||||||||||| |||||| |||||||||| ||||||||||||| |||||| |||||||| ||||| |||||||    ||||||||||    
T  1828119 ggatgggggccggagttgttcttcttggtggcgggagatagtgaggattagagatgggataggtgagggtggtgagggatggtttgggtcttgtgttagg 1828218  T
Q  127 aggagggtaggggatggagccgataccgatttttggcg 164  Q
    |||||||| || ||||| || || || || ||||||||    
T  1828219 aggagggtgggagatggtgcagacactgacttttggcg 1828256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 27 - 164
Target Start/End: Complemental strand, 15740781 - 15740645
Alignment:
Q  27 ggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgttagg 126  Q
    |||||||||||| ||||||||||| |||||| |||||||||| ||||||| |||||||||||| |||||||| ||||| |||||||    ||||| ||||    
T  15740781 ggatgggggccggagttgttcttcatggtggcgggagatagtgaggattaaagatgagataggtgagggtggagagggatggtttgggtcttgtg-tagg 15740683  T
Q  127 aggagggtaggggatggagccgataccgatttttggcg 164  Q
    |||||||| || ||||| || ||||| |||||||||||    
T  15740682 aggagggtgggagatggtgcagatactgatttttggcg 15740645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 104
Target Start/End: Original strand, 19735311 - 19735391
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggaggg 104  Q
    ||||||||||||||| ||||||||||| |||||| |||||||||| ||||||||||||| |||| | ||||| || |||||    
T  19735311 ggaggatgggggccggagttgttcttcttggtggcgggagatagtgaggattagagatgggataagagagggcggagaggg 19735391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 42778802 - 42778746
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagaga 80  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||||   ||||||||||    
T  42778802 ggaggttgggggccggagttgttcttcttggtggagggagatagggcggattagaga 42778746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 23657861 - 23657822
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggag 63  Q
    ||||||||||||||||||||||||||| |||||| |||||    
T  23657861 ggaggatgggggccgaagttgttcttcttggtggcgggag 23657822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 123; Significance: 3e-63; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 50 - 260
Target Start/End: Complemental strand, 43388903 - 43388693
Alignment:
Q  50 cgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgttaggaggagggtaggggatggagccga 149  Q
    |||||||||||||||| || ||||||||||||| |||||| || |||||||||||||||||| || ||||||||||||||||||| ||||||||||| ||    
T  43388903 cgtggtggagggagattgtgaggattagagatgggataggtgatggtggggagggctggtttacaagttgtgttaggaggagggtgggggatggagctga 43388804  T
Q  150 taccgatttttggcgagactgttggtgtggtagtgttccgttgtgtgtgttttagacggctatatgatttagctctcaataaagtaattatggtgaggaa 249  Q
    | | |||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||| |||||||||||| ||| |||||| |||   ||||||||    
T  43388803 tgctgatttttggcgagattgttggtgtggtagtgttccgttgtgtgcgttttaggcggctttatgatttagctgtcactaaagttatttcagtgaggaa 43388704  T
Q  250 catgttcttgt 260  Q
    |||||| ||||    
T  43388703 catgtttttgt 43388693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 24 - 237
Target Start/End: Original strand, 47622653 - 47622868
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||| ||||||| ||||||||||| |||||||| |||||||| ||||||||||||| ||||  ||||| ||||||||| |||||| | | |||||||    
T  47622653 ggaggataggggccggagttgttcttcttggtggagagagatagtgaggattagagatgggataaacgaggatggggagggttggttttcggattgtgtt 47622752  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtggtagtgttccgtt--gtgtgtgttttagacggctatatgatttag 221  Q
    ||||||||||| ||||||||  ||||||| ||||||||||| || ||||||||||||  |||||||||  ||| | | ||||||||||||||| |||| |    
T  47622753 aggaggagggtgggggatggttccgatactgatttttggcgggattgttggtgtggtgatgttccgtttcgtgagcgctttagacggctatataatttgg 47622852  T
Q  222 ctctcaataaagtaat 237  Q
    |  |||| ||||||||    
T  47622853 ccgtcaacaaagtaat 47622868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 24 - 179
Target Start/End: Complemental strand, 6051167 - 6051012
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||| |||||| |||||||| ||||| |||||||    |||||||    
T  6051167 ggaggatgggggccggagttgttcttcgtggtggagggagattgtgaggattagagatgggataggtgagggtggagagggatggtttgggtcttgtgtt 6051068  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtgg 179  Q
    |||||||| || || ||||| || ||||| ||||||||||| || |||||||||||    
T  6051067 aggaggagagtgggagatggggcagatactgatttttggcgtgattgttggtgtgg 6051012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 24 - 179
Target Start/End: Complemental strand, 35541613 - 35541458
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||| |||||| |||||||| ||||| |||||||    |||||||    
T  35541613 ggaggatgggggccggagttgttcttcgtggtggagggagatcgtgaggattagagatgggataggtgagggtggcgagggatggtttgggtcttgtgtt 35541514  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtgg 179  Q
    |||||||| || || ||||| || ||||| ||||||||||| || |||||||||||    
T  35541513 aggaggagagtgggagatggggcagatactgatttttggcgtgattgttggtgtgg 35541458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 197
Target Start/End: Original strand, 11908705 - 11908854
Alignment:
Q  48 ttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgttaggaggagggtaggggatggagcc 147  Q
    |||||||||||||||||| || ||||||||||||| |||||| |||||||| ||||| |||||||     ||||||||||||||||| || ||||| ||     
T  11908705 ttcgtggtggagggagattgtgaggattagagatgggataggtgagggtggagagggttggtttgggacatgtgttaggaggagggtgggagatggtgca 11908804  T
Q  148 gataccgatttttggcgagactgttggtgtggtagtgttccgttgtgtgt 197  Q
    ||||| |||||||| || || |||||||||||   |||||| ||||||||    
T  11908805 gatactgatttttgacgtgattgttggtgtggagatgttcctttgtgtgt 11908854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 17827857 - 17827805
Alignment:
Q  31 gggggccgaagttgttcttcgtggtggagggagatagttaggattagagatga 83  Q
    |||||| ||||||||||||  |||||||||||| |||  ||||||||||||||    
T  17827857 gggggctgaagttgttcttattggtggagggaggtagggaggattagagatga 17827805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 24 - 179
Target Start/End: Original strand, 105419 - 105574
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||| |||||| |||||||| ||||| |||||||    |||||||    
T  105419 ggaggatgggggccggagttgttcttcgtggtggagggagattgtgaggattagagatgggataggtgagggtggagagggatggtttgggtcttgtgtt 105518  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtgtgg 179  Q
    |||||||| || || ||||| || ||||| ||||||||||| || |||||||||||    
T  105519 aggaggagagtgggagatggggcagatactgatttttggcgtgattgttggtgtgg 105574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 3816 - 3664
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||| ||||||||| |||||||| |||||||||||||||||||| ||||||||||||| |||||| |||||||| ||||| |||||||     || |||    
T  3816 ggaggttgggggccggagttgttcgtcgtggtggagggagatagtgaggattagagatgggataggtgagggtggagaggggtggtttgggtcctgcgtt 3717  T
Q  124 aggaggagggtaggggatggagccgataccgatttttggcgagactgttggtg 176  Q
    ||||||||||| || ||||| || ||||||||||||||||| || ||||||||    
T  3716 aggaggagggtgggagatggtgcggataccgatttttggcgtgattgttggtg 3664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 108 - 1
Alignment:
Q  24 ggaggatgggggccgaagttgttcttcgtggtggagggagatagttaggattagagatgagataggcgagggtggggagggctggtttgcaggttgtgtt 123  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||| || |||||||||| |||||||||||||| |||||| |||||||| | |||||||    
T  108 ggaggatgggggccgaagttgctcttcttggtggagggagatagtcagaattagagatgggataggcgagggtgtggagggttggtttgcggattgtgtt 9  T
Q  124 aggaggag 131  Q
    ||||||||    
T  8 aggaggag 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University