View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4759_high_16 (Length: 251)
Name: NF4759_high_16
Description: NF4759
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4759_high_16 |
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Alignment Details
Target: chr8 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 34719739 - 34719506
Alignment:
| Q |
1 |
ctcttctcgtgttatattcatgatagaagttttaataacaatatcatttctgttttcaaacattgtaatgttcagtaaaaacggttttttgttggtttct |
100 |
Q |
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| T |
34719739 |
ctcttctcgtgttatattcatgatagaagttttaataacaatatcatttctgttttcaaacattgtaatgttcagtaaaaacggttttttgttggtttct |
34719640 |
T |
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| Q |
101 |
attcaaagtttagtaaacaggacttaaaataaaaatgagatgatatttttataaactgaaannnnnnnnnnnnnnnnnnnnnntcctgaaatcaaaatga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |
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| T |
34719639 |
attcaaagtttagtaaacaggacttaaaataaaaatgagatgatgtttttataaactgaaa----------atatatatatattcctgaaatcaaaatga |
34719550 |
T |
|
| Q |
201 |
cccttatcaattcaattctagctgtaccttagttccctttgcta |
244 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34719549 |
cccttatcaattcaattctagctgtaccttagttccctttgcta |
34719506 |
T |
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