View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4759_low_25 (Length: 218)
Name: NF4759_low_25
Description: NF4759
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4759_low_25 |
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Alignment Details
Target: chr8 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 45457399 - 45457590
Alignment:
| Q |
13 |
aatgagatgaaatgaggggatgaattataa---taataataataagctgtccgtccacagtgacagatcaaggagatacaatataattgattcacattaa |
109 |
Q |
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| T |
45457399 |
aatgaaatgaaatgaggggatgaattataataataataataataagctgtccgtccacagtgacagatcaaggtgatacaatataattgattcacattaa |
45457498 |
T |
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| Q |
110 |
cgtgaagatcactatgtatgtctgaatgaatgcacatgttgtttgtgattgactgtgagtcaatatcataacatatgtgttgatattgatat |
201 |
Q |
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| T |
45457499 |
cgtgaagatcactatgtatgtctgaatgaatgcacatgttgtttgtgattgactgtgagtcaatatcataacatatgtgttgatattgatat |
45457590 |
T |
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