View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4760-Insertion-2 (Length: 592)
Name: NF4760-Insertion-2
Description: NF4760
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4760-Insertion-2 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 448; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 448; E-Value: 0
Query Start/End: Original strand, 8 - 592
Target Start/End: Complemental strand, 42297829 - 42297244
Alignment:
| Q |
8 |
ctgtacatttatttcataatgatatcacaaagaaatataatacaagacaaatacatttataattaatgattagtaaaaatattgttgatagatttattac |
107 |
Q |
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| T |
42297829 |
ctgtacatttatttcataatgatatcacaaagaaatataatacaagacaaatacatttataattaatgattagtaaaaaaattgttgatagatttattaa |
42297730 |
T |
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| Q |
108 |
gacaatatttttctcaaataatgatcattagtttcctactcgaccnnnnnnngacaatttttagcttctacctttatacgaatgatacaatgggtaaaaa |
207 |
Q |
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| T |
42297729 |
gacaatatttttctcaaataacgatcattagtttcctactcgaccaaaaaaagacaatttttagcttctacctttatacgaatgatacaatgggtaaaaa |
42297630 |
T |
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| Q |
208 |
agagaagataaaaacatatcaaggtcatggcatcagtcattgaaagcatttatccaaccgcgtcgtaattaaaaatatgtatttgcttaactatgcaatc |
307 |
Q |
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| T |
42297629 |
agagaggataaaaacatatcaaggtcatggtatcagtcattgaaagcatttatccaaccacgtcgtaattaaaaaaatgtatttgcttaactatgcaatc |
42297530 |
T |
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| Q |
308 |
attataaacaacttaccaacttttgcaacnnnnnnnnntataaaaattacttcaa-annnnnnnnnngtcagtaggataaataacgtaaatctaacatat |
406 |
Q |
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| T |
42297529 |
attataaaaaacttaccaacttttgcaacaaaaaaaaatatacaaattacttcaacgttttttttttgtcaggaggataaataacgtaaatctaacatat |
42297430 |
T |
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| Q |
407 |
aagaagttatgtcattattataatgtaaatgttgtaaatgaaattttttgagtatgtgtgatcgcataagcaatatgggatgcaaccaaattgttggcgt |
506 |
Q |
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| T |
42297429 |
aagaagttatgtcattattataatgtaaatgttgtaaatgaaattttttgagtatgtgtgatcgcataagcagtatgggatgcaaccaaattgttggcga |
42297330 |
T |
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| Q |
507 |
cttatcatgcatgatgtttttgtttcggacaatgaacattcacatttcaagaaatttatctctcaaatcaaaggacatttagaata |
592 |
Q |
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| T |
42297329 |
cttatcatgcatgatgtttttgtttcggacaatgaacattcacatttcaagaaatttatctctcaaatcaaaggacatttagaata |
42297244 |
T |
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