View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4761-Insertion-1 (Length: 489)
Name: NF4761-Insertion-1
Description: NF4761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4761-Insertion-1 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 466; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 466; E-Value: 0
Query Start/End: Original strand, 7 - 489
Target Start/End: Original strand, 45102730 - 45103208
Alignment:
| Q |
7 |
acttaaggccttgaaaacttacaattggactatcacaagtccctaatgctgtcccatttgatccctgtggcatttattgatgaaattttaacttaccata |
106 |
Q |
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| T |
45102730 |
acttaaggccttgaaaacttacaattggactatcacaagtccctaatgctgtcccatttgatccctgtggcatttattgatgaaattttaacttaccata |
45102829 |
T |
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| Q |
107 |
aaaattgataaaaattcttataattataaatcatcactaccttgtgaggcttacaaggtaggtcccaccatttttgtcctcttccatcaattgaaccact |
206 |
Q |
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| T |
45102830 |
aaaattgataaaaattcttataattataaatcatcactaccttgtgaggcttacaaggtaggtcccaccatttttgtcctcttccatcaattgaaccact |
45102929 |
T |
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| Q |
207 |
tccttctagtgacattcccttcattctgtaaaaaaccagccactgtcgcctactgttgttctttggccaagattcaggtccatcaggtgccaaaacagtg |
306 |
Q |
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| T |
45102930 |
tccttctagtgacattcccttcattctgtaaaaaaccagccactgtcgcctactgttgttctttggccaagattcaggtccatcaggtgccaaaacagtg |
45103029 |
T |
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| Q |
307 |
ccatccacctaattgataatgccaacaaactccatcagttaactagctagtaaaaagtctctcgtcagccgcgcactcagtccaacaaactctcagccgt |
406 |
Q |
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| T |
45103030 |
ccatccacctaattgataatgccaacaaactccatcagttaactagctagtaaaaagtctctcgtcagccgcgcactcagtccaacaaactctcagccgt |
45103129 |
T |
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| Q |
407 |
tggatcgagatgcaacattgatctaacgactgactgaggttttgttggacggactgcatggcaatagaaaatcagagctgagt |
489 |
Q |
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| T |
45103130 |
tggatcgagatgcaacattgatctaac----gactgaggttttgttggacggactgcatggcaatagaaaatcagagctgagt |
45103208 |
T |
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Target: chr1 (Bit Score: 86; Significance: 7e-41; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 139 - 316
Target Start/End: Complemental strand, 38661248 - 38661071
Alignment:
| Q |
139 |
atcactaccttgtgaggcttacaaggtaggtcccaccatttttgtcctcttccatcaattgaaccacttccttctagtgacattcccttcattctgtaaa |
238 |
Q |
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|||| |||||| |||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||| |||||||| || || | ||| |||| |
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| T |
38661248 |
atcaataccttatgaggcttacaagggaggtcccaccatttttgtcctctgccatcaattgtaccacttccttcaagtgacatgccattgactctataaa |
38661149 |
T |
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| Q |
239 |
aaaccagccactgtcgcctactgttgttctttggccaagattcaggtccatcaggtgccaaaacagtgccatccacct |
316 |
Q |
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| T |
38661148 |
agaccaaccattgacgcctactgttgttttttagccatgattcaggtccatcaggtgtcataatagttccatcaacct |
38661071 |
T |
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