View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4761-Insertion-11 (Length: 356)
Name: NF4761-Insertion-11
Description: NF4761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4761-Insertion-11 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 345; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 8 - 356
Target Start/End: Complemental strand, 33825234 - 33824886
Alignment:
| Q |
8 |
atcgtaaatttgctaaactatattgtagttattacttttttcatgtccaaacataattgttacataacatatgttacattatgtgatgtgtaattgcaga |
107 |
Q |
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| T |
33825234 |
atcgtaaatttgctaaactatattgtagttattacttttttcatgtccaaacttaattgttacataacatatgttacattatgtgatgtgtaattgcaga |
33825135 |
T |
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| Q |
108 |
caaatctagagaaagtgtggtggcaactagggatgtgaattttgacaagtattttggagcttgtaagaagaatgaacaagtggaaaagctaaagctaata |
207 |
Q |
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| T |
33825134 |
caaatctagagaaagtgtggtggcaactagggatgtgaattttgacaagtattttggagcttgtaagaagaatgaacaagtggaaaagctaaagctaata |
33825035 |
T |
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| Q |
208 |
gatgtggtggtggaccagtccaatttttcagattcaaactctgaagtatcagtatctgagtcagttaccaccaataggtccaatatctcaatttctggtg |
307 |
Q |
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| T |
33825034 |
gatgtggtggtggaccagtccaatttttcagattcaaactctgaagtatcagtatctgagtcagttaccaccaataggtccaatatctcaatttctggtg |
33824935 |
T |
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| Q |
308 |
aaagtgaaaatgttggtgttaagattaacatgttactaccattcattga |
356 |
Q |
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| T |
33824934 |
aaagtgaaaatgttggtgttaagattaacatgttactaccattcattga |
33824886 |
T |
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Target: chr6 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 9361534 - 9361590
Alignment:
| Q |
217 |
gtggaccagtccaatttttcagattcaaactctgaagtatcagtatctgagtcagtt |
273 |
Q |
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| T |
9361534 |
gtggaccaatccaatcattcatattcaaactcagaagtttcagtatctgagtcagtt |
9361590 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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