View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4761_high_6 (Length: 302)
Name: NF4761_high_6
Description: NF4761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4761_high_6 |
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Alignment Details
Target: chr2 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 15753384 - 15753670
Alignment:
| Q |
1 |
tatagattaagcaccaaataatgagtccgattaatgtgtataataatcacatattacaacattaatatttgaattatgtttatgttgtatcgcagtggtt |
100 |
Q |
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| T |
15753384 |
tatagattaagcaccaaataatgagtccggttaatgtgtataataatcacatattacaacattaatatttgaattatgtttatgttgtatcgcagtggtt |
15753483 |
T |
|
| Q |
101 |
gtgttgatttcagctagcattgcagtggttccagctgcattaagtgttcctgatatggagccatggtttcatctagcacttgtggttttattgagtggat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15753484 |
gtgttgatttcagctagcattgcagtggttccagctgcattaagtgttcctgatatggagccatggtttcatctagcacttgtggttttattgagtggat |
15753583 |
T |
|
| Q |
201 |
gcccttgtgctcttatcctctccacaccggttgcaatcttttgtgctctcacaaaagctgcaataagtggattactattgaaaggtg |
287 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15753584 |
gcccttgtgctcttatcctctccacaccggttgcaatcttttgtgctctcacaaaagctgcaataagtggattactattgaaaggtg |
15753670 |
T |
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